Query 002121
Match_columns 964
No_of_seqs 859 out of 6518
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 13:13:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002121.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002121hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 7.7E-53 2.6E-57 466.4 24.9 260 627-904 41-320 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 3.2E-53 1.1E-57 463.0 20.1 261 627-905 13-291 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 8.9E-53 3.1E-57 461.5 18.8 256 628-901 27-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 2.7E-52 9.4E-57 455.6 21.7 260 626-902 35-299 (307)
5 4b9d_A Serine/threonine-protei 100.0 6.5E-51 2.2E-55 450.9 18.8 250 627-896 24-276 (350)
6 4fih_A Serine/threonine-protei 100.0 2E-50 6.9E-55 446.2 22.5 249 627-896 74-323 (346)
7 3hmm_A TGF-beta receptor type- 100.0 1.7E-50 5.9E-55 444.4 21.2 267 627-907 3-301 (303)
8 4ase_A Vascular endothelial gr 100.0 2.3E-50 7.8E-55 450.1 21.0 272 617-905 54-349 (353)
9 3fpq_A Serine/threonine-protei 100.0 8.9E-50 3E-54 432.6 23.8 246 630-896 29-282 (290)
10 4g3f_A NF-kappa-beta-inducing 100.0 4.2E-50 1.4E-54 442.4 20.7 258 626-906 57-319 (336)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.5E-50 8.5E-55 438.9 17.6 249 627-896 32-284 (311)
12 4fie_A Serine/threonine-protei 100.0 2.8E-49 9.6E-54 447.7 24.6 249 627-896 151-400 (423)
13 3hyh_A Carbon catabolite-derep 100.0 8E-49 2.7E-53 421.3 22.2 245 627-896 13-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 6.5E-49 2.2E-53 427.8 14.9 242 627-891 24-271 (304)
15 4g31_A Eukaryotic translation 100.0 1.3E-47 4.4E-52 419.4 22.0 250 627-896 5-279 (299)
16 4f9c_A Cell division cycle 7-r 100.0 8.7E-45 3E-49 407.9 23.4 212 620-841 14-258 (361)
17 4b99_A Mitogen-activated prote 100.0 6.8E-45 2.3E-49 413.0 22.3 263 627-896 54-344 (398)
18 2qkw_B Protein kinase; three-h 100.0 3.5E-44 1.2E-48 399.3 23.7 282 616-905 28-317 (321)
19 1qcf_A Haematopoetic cell kina 100.0 5.9E-45 2E-49 425.0 14.6 398 453-902 26-443 (454)
20 3uto_A Twitchin; kinase, muscl 100.0 1.4E-43 4.9E-48 421.9 24.6 252 626-896 156-410 (573)
21 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.1E-44 3.6E-49 422.4 14.2 392 453-904 20-441 (452)
22 3uim_A Brassinosteroid insensi 100.0 2.3E-43 7.7E-48 393.5 23.1 282 613-900 16-308 (326)
23 1opk_A P150, C-ABL, proto-onco 100.0 2.6E-44 8.9E-49 423.7 14.1 393 453-902 61-477 (495)
24 3v5w_A G-protein coupled recep 100.0 2.3E-43 7.8E-48 416.3 21.0 247 626-896 188-449 (689)
25 4eco_A Uncharacterized protein 100.0 4.4E-43 1.5E-47 426.3 21.7 366 23-394 26-526 (636)
26 3rgz_A Protein brassinosteroid 100.0 4.4E-43 1.5E-47 435.9 22.2 362 19-392 4-379 (768)
27 4ecn_A Leucine-rich repeat pro 100.0 1.2E-42 4.1E-47 429.6 25.4 363 22-393 264-839 (876)
28 1k9a_A Carboxyl-terminal SRC k 100.0 2.7E-43 9.2E-48 410.3 18.4 395 453-905 29-447 (450)
29 2nru_A Interleukin-1 receptor- 100.0 7.5E-42 2.6E-46 377.7 28.2 280 614-902 12-305 (307)
30 2h8h_A Proto-oncogene tyrosine 100.0 4E-44 1.4E-48 426.0 10.1 391 453-903 103-523 (535)
31 3p86_A Serine/threonine-protei 100.0 5.3E-42 1.8E-46 379.3 22.0 270 618-905 28-300 (309)
32 3fxz_A Serine/threonine-protei 100.0 1.9E-41 6.5E-46 372.7 24.8 250 626-896 19-269 (297)
33 2c30_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 375.0 26.2 261 615-896 23-294 (321)
34 3soc_A Activin receptor type-2 100.0 7.8E-42 2.7E-46 380.4 21.1 263 626-905 23-320 (322)
35 2psq_A Fibroblast growth facto 100.0 1.7E-41 5.7E-46 385.0 23.0 261 626-904 80-365 (370)
36 3s95_A LIMK-1, LIM domain kina 100.0 5.3E-41 1.8E-45 371.6 24.8 262 627-905 10-284 (310)
37 3kul_A Ephrin type-A receptor 100.0 4E-41 1.4E-45 375.1 23.8 262 626-906 48-316 (325)
38 3vhe_A Vascular endothelial gr 100.0 1.1E-41 3.7E-46 385.2 19.3 272 617-905 12-357 (359)
39 3zgw_A Maternal embryonic leuc 100.0 3.4E-41 1.1E-45 378.0 21.1 251 625-897 8-261 (347)
40 4eqm_A Protein kinase; transfe 100.0 3.3E-41 1.1E-45 370.3 20.5 263 626-905 10-277 (294)
41 3fe3_A MAP/microtubule affinit 100.0 3.2E-41 1.1E-45 375.8 20.1 248 625-896 13-264 (328)
42 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-41 8.3E-46 384.9 18.5 262 625-905 112-376 (377)
43 4hcu_A Tyrosine-protein kinase 100.0 6.7E-41 2.3E-45 362.8 20.9 257 627-904 10-267 (269)
44 2qol_A Ephrin receptor; recept 100.0 7.2E-41 2.5E-45 380.0 22.0 262 626-906 44-312 (373)
45 3tt0_A Basic fibroblast growth 100.0 1.9E-40 6.5E-45 378.3 24.7 263 626-906 68-355 (382)
46 3ugc_A Tyrosine-protein kinase 100.0 1.1E-41 3.7E-46 374.3 13.9 269 626-904 9-292 (295)
47 3sxs_A Cytoplasmic tyrosine-pr 100.0 7.3E-41 2.5E-45 362.2 20.1 258 626-904 7-265 (268)
48 2yab_A Death-associated protei 100.0 2.5E-40 8.5E-45 373.2 24.8 252 625-896 10-272 (361)
49 3lb7_A RAF proto-oncogene seri 100.0 1.3E-40 4.6E-45 367.7 21.8 262 626-904 35-301 (307)
50 3tki_A Serine/threonine-protei 100.0 8.8E-41 3E-45 371.9 20.4 253 626-896 6-261 (323)
51 1o6l_A RAC-beta serine/threoni 100.0 2E-40 6.9E-45 370.5 23.0 247 627-896 5-260 (337)
52 3q4u_A Activin receptor type-1 100.0 2.6E-40 9E-45 364.1 23.2 257 626-901 7-300 (301)
53 3gen_A Tyrosine-protein kinase 100.0 6.4E-41 2.2E-45 365.7 18.0 260 625-905 22-282 (283)
54 1tki_A Titin; serine kinase, m 100.0 2E-40 6.9E-45 368.6 21.8 252 626-897 4-258 (321)
55 1luf_A Muscle-specific tyrosin 100.0 7.7E-41 2.6E-45 375.7 18.4 266 621-904 41-336 (343)
56 3qup_A Tyrosine-protein kinase 100.0 1E-40 3.5E-45 371.6 19.1 269 623-909 19-304 (323)
57 1t46_A HOMO sapiens V-KIT hard 100.0 2.4E-40 8.3E-45 366.5 22.0 264 625-905 21-309 (313)
58 2ivs_A Proto-oncogene tyrosine 100.0 2.2E-40 7.4E-45 367.1 21.1 263 625-905 21-313 (314)
59 3l9p_A Anaplastic lymphoma kin 100.0 8.5E-41 2.9E-45 378.8 18.3 262 626-905 70-347 (367)
60 1ogq_A PGIP-2, polygalacturona 100.0 1E-40 3.4E-45 369.7 17.9 291 23-371 2-302 (313)
61 2y0a_A Death-associated protei 100.0 5.7E-40 2E-44 365.9 24.0 251 626-896 10-271 (326)
62 1rjb_A FL cytokine receptor; k 100.0 3.1E-40 1.1E-44 371.0 21.4 266 623-905 41-336 (344)
63 4fvq_A Tyrosine-protein kinase 100.0 1.2E-40 4.2E-45 364.5 17.3 255 626-906 7-278 (289)
64 2izr_A Casein kinase I isoform 100.0 4.1E-40 1.4E-44 367.9 21.8 265 626-908 8-286 (330)
65 3poz_A Epidermal growth factor 100.0 2.7E-40 9.2E-45 368.8 20.3 259 626-904 14-279 (327)
66 3niz_A Rhodanese family protei 100.0 8.9E-40 3E-44 361.9 24.3 265 625-896 19-300 (311)
67 3dtc_A Mitogen-activated prote 100.0 4.6E-40 1.6E-44 356.4 21.3 253 626-900 6-270 (271)
68 1kob_A Twitchin; kinase, intra 100.0 7.7E-40 2.6E-44 372.5 24.1 252 626-896 50-304 (387)
69 3og7_A AKAP9-BRAF fusion prote 100.0 2.8E-40 9.6E-45 361.9 19.5 260 626-902 23-287 (289)
70 3kex_A Receptor tyrosine-prote 100.0 4.5E-40 1.6E-44 366.7 21.4 258 627-904 13-277 (325)
71 2xir_A Vascular endothelial gr 100.0 4E-40 1.4E-44 365.3 20.8 272 617-905 17-312 (316)
72 1csn_A Casein kinase-1; phosph 100.0 1.6E-39 5.4E-44 357.3 25.2 264 626-906 9-286 (298)
73 2bdw_A Hypothetical protein K1 100.0 4.3E-40 1.5E-44 372.1 21.1 253 624-896 26-284 (362)
74 2w4o_A Calcium/calmodulin-depe 100.0 5.5E-40 1.9E-44 369.5 21.5 251 625-896 51-305 (349)
75 3qd2_B Eukaryotic translation 100.0 6.6E-40 2.3E-44 365.9 22.0 251 626-896 5-325 (332)
76 4aw2_A Serine/threonine-protei 100.0 2E-40 6.7E-45 382.5 18.2 264 617-896 64-338 (437)
77 3op5_A Serine/threonine-protei 100.0 5.2E-40 1.8E-44 372.3 21.0 274 625-908 33-334 (364)
78 4euu_A Serine/threonine-protei 100.0 1.7E-39 5.8E-44 361.1 24.8 269 627-901 9-307 (319)
79 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.8E-40 9.7E-45 371.7 18.3 248 626-896 22-280 (353)
80 3kmu_A ILK, integrin-linked ki 100.0 5.8E-40 2E-44 355.3 20.1 253 627-902 10-269 (271)
81 3v8s_A RHO-associated protein 100.0 1.8E-40 6.1E-45 379.9 16.9 259 619-896 61-329 (410)
82 1qpc_A LCK kinase; alpha beta 100.0 5.9E-40 2E-44 357.3 20.1 262 623-905 9-271 (279)
83 1mp8_A Focal adhesion kinase 1 100.0 3.5E-40 1.2E-44 359.6 18.1 260 625-905 13-278 (281)
84 3soa_A Calcium/calmodulin-depe 100.0 1.1E-39 3.8E-44 377.5 23.3 253 625-896 9-267 (444)
85 3o0g_A Cell division protein k 100.0 9E-40 3.1E-44 358.5 21.1 263 627-896 2-282 (292)
86 4f0f_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 355.8 22.7 253 626-900 18-286 (287)
87 3kfa_A Tyrosine-protein kinase 100.0 3.5E-40 1.2E-44 360.7 17.7 262 624-905 10-273 (288)
88 2zv2_A Calcium/calmodulin-depe 100.0 1.9E-39 6.5E-44 357.0 23.6 249 626-896 12-292 (298)
89 4e5w_A Tyrosine-protein kinase 100.0 1.8E-40 6.1E-45 365.7 15.3 259 627-902 21-301 (302)
90 1ob3_A PFPK5, cell division co 100.0 1.5E-39 5E-44 356.0 22.5 263 627-896 2-280 (288)
91 2pvf_A Fibroblast growth facto 100.0 1.5E-39 5E-44 364.0 22.9 262 626-905 34-320 (334)
92 1fot_A TPK1 delta, CAMP-depend 100.0 1.2E-39 4.1E-44 361.5 22.0 244 627-896 6-258 (318)
93 2x4f_A Myosin light chain kina 100.0 7.8E-40 2.7E-44 371.4 20.9 246 632-896 94-342 (373)
94 3c0i_A Peripheral plasma membr 100.0 1.2E-39 4.2E-44 367.1 22.3 253 626-896 23-286 (351)
95 4dc2_A Protein kinase C IOTA t 100.0 1.1E-39 3.8E-44 371.3 21.7 245 626-891 51-307 (396)
96 3ork_A Serine/threonine protei 100.0 8.7E-40 3E-44 362.0 20.3 260 626-902 11-280 (311)
97 3t9t_A Tyrosine-protein kinase 100.0 8.8E-40 3E-44 353.3 19.5 258 626-904 7-265 (267)
98 3p1a_A MYT1 kinase, membrane-a 100.0 6.7E-40 2.3E-44 363.0 19.0 245 626-896 56-304 (311)
99 3dbq_A Dual specificity protei 100.0 1.1E-39 3.9E-44 366.3 20.7 252 626-897 8-274 (343)
100 2eva_A TAK1 kinase - TAB1 chim 100.0 3.4E-39 1.2E-43 356.6 23.9 255 627-905 8-265 (307)
101 1xjd_A Protein kinase C, theta 100.0 5.8E-40 2E-44 367.8 17.9 249 624-895 14-268 (345)
102 3llt_A Serine/threonine kinase 100.0 7.5E-40 2.6E-44 370.4 19.0 210 614-833 22-262 (360)
103 3a62_A Ribosomal protein S6 ki 100.0 2E-39 6.9E-44 361.7 21.8 248 626-896 16-276 (327)
104 3mdy_A Bone morphogenetic prot 100.0 8.1E-39 2.8E-43 358.2 26.8 270 622-907 32-335 (337)
105 3hko_A Calcium/calmodulin-depe 100.0 2.2E-39 7.5E-44 364.2 22.0 261 621-896 20-330 (345)
106 2vd5_A DMPK protein; serine/th 100.0 4.8E-40 1.6E-44 376.6 16.8 263 617-896 51-327 (412)
107 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.5E-39 8.6E-44 366.8 22.5 257 623-905 61-341 (365)
108 3g33_A Cell division protein k 100.0 2.9E-39 9.8E-44 357.3 22.4 265 625-896 7-296 (308)
109 1p4o_A Insulin-like growth fac 100.0 3.3E-40 1.1E-44 367.1 14.8 268 617-902 15-298 (322)
110 3lxl_A Tyrosine-protein kinase 100.0 2.2E-40 7.6E-45 369.5 13.4 262 627-905 23-305 (327)
111 2wqm_A Serine/threonine-protei 100.0 2.6E-39 9E-44 357.9 21.7 264 626-906 31-300 (310)
112 1u59_A Tyrosine-protein kinase 100.0 4.7E-39 1.6E-43 351.8 23.2 263 627-909 9-278 (287)
113 3lxp_A Non-receptor tyrosine-p 100.0 6.2E-40 2.1E-44 364.4 16.5 258 629-905 33-312 (318)
114 3h4j_B AMPK kdaid, SNF1-like p 100.0 5E-40 1.7E-44 366.9 15.7 247 626-897 8-259 (336)
115 2a19_B Interferon-induced, dou 100.0 9.3E-40 3.2E-44 356.4 17.4 250 625-904 9-275 (284)
116 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.7E-39 9.2E-44 363.5 21.4 244 627-896 41-293 (350)
117 2eue_A Carbon catabolite derep 100.0 3.6E-39 1.2E-43 350.4 21.4 245 627-896 13-262 (275)
118 2i1m_A Macrophage colony-stimu 100.0 1.2E-39 4.1E-44 364.5 18.2 267 622-905 41-328 (333)
119 2zmd_A Dual specificity protei 100.0 3.3E-39 1.1E-43 368.7 22.0 251 627-897 56-321 (390)
120 2jii_A Serine/threonine-protei 100.0 1.2E-39 3.9E-44 367.7 17.9 268 627-908 42-341 (352)
121 3v47_A TOLL-like receptor 5B a 100.0 4.3E-39 1.5E-43 376.1 23.4 360 55-424 9-437 (455)
122 4fr4_A YANK1, serine/threonine 100.0 3.2E-39 1.1E-43 366.2 21.6 247 627-896 15-271 (384)
123 2a2a_A Death-associated protei 100.0 6.7E-39 2.3E-43 356.6 23.7 251 626-896 11-272 (321)
124 2h34_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 356.9 21.1 261 626-905 33-298 (309)
125 3a8x_A Protein kinase C IOTA t 100.0 3.5E-39 1.2E-43 362.0 21.3 244 627-891 9-264 (345)
126 3f3z_A Calcium/calmodulin-depe 100.0 5.3E-39 1.8E-43 349.4 21.9 250 626-896 8-261 (277)
127 3gni_B Strad alpha; kinase fol 100.0 2.6E-39 9E-44 370.0 20.5 204 626-832 24-239 (389)
128 3brb_A Proto-oncogene tyrosine 100.0 2.9E-39 1E-43 358.0 20.0 267 621-905 28-310 (313)
129 2i0e_A Protein kinase C-beta I 100.0 2.9E-39 9.8E-44 363.4 20.1 248 626-896 19-276 (353)
130 3lzb_A Epidermal growth factor 100.0 3.1E-39 1.1E-43 360.1 20.0 258 626-903 14-278 (327)
131 3f66_A Hepatocyte growth facto 100.0 4.5E-39 1.5E-43 353.9 20.9 260 627-905 25-293 (298)
132 3pls_A Macrophage-stimulating 100.0 8.3E-39 2.8E-43 351.6 22.9 260 628-905 22-289 (298)
133 2pmi_A Negative RE, cyclin-dep 100.0 4.3E-39 1.5E-43 357.5 20.7 265 626-896 4-293 (317)
134 3g2f_A Bone morphogenetic prot 100.0 7.7E-39 2.6E-43 358.3 22.7 268 626-906 12-321 (336)
135 1b6c_B TGF-B superfamily recep 100.0 1.7E-38 5.8E-43 356.4 25.5 267 622-907 37-340 (342)
136 3cc6_A Protein tyrosine kinase 100.0 5E-39 1.7E-43 350.4 20.5 256 626-904 11-274 (281)
137 2yex_A Serine/threonine-protei 100.0 6.4E-39 2.2E-43 348.3 21.1 253 626-896 6-261 (276)
138 1xbb_A Tyrosine-protein kinase 100.0 5.6E-39 1.9E-43 351.9 20.8 260 625-905 14-281 (291)
139 1nxk_A MAP kinase-activated pr 100.0 7.7E-39 2.6E-43 366.7 22.8 249 627-897 61-322 (400)
140 4ejn_A RAC-alpha serine/threon 100.0 1.6E-39 5.5E-44 378.4 17.2 248 626-896 147-404 (446)
141 2v62_A Serine/threonine-protei 100.0 1.3E-39 4.3E-44 366.2 15.7 263 626-901 36-326 (345)
142 3c1x_A Hepatocyte growth facto 100.0 3.5E-39 1.2E-43 365.9 19.4 259 628-905 90-357 (373)
143 2y94_A 5'-AMP-activated protei 100.0 7.7E-39 2.6E-43 372.9 22.6 247 626-896 15-266 (476)
144 4hgt_A Casein kinase I isoform 100.0 8.3E-39 2.8E-43 351.1 21.6 263 625-907 7-284 (296)
145 3kk8_A Calcium/calmodulin depe 100.0 1.4E-38 4.9E-43 347.2 23.4 252 626-897 5-262 (284)
146 1mqb_A Ephrin type-A receptor 100.0 1.5E-38 5.2E-43 355.6 23.9 260 627-905 44-311 (333)
147 3uzp_A CKI-delta, CKID, casein 100.0 2.2E-38 7.6E-43 347.8 24.7 262 626-907 8-284 (296)
148 2acx_A G protein-coupled recep 100.0 4.9E-39 1.7E-43 379.5 20.6 251 626-896 183-444 (576)
149 4eut_A Serine/threonine-protei 100.0 5.7E-39 1.9E-43 367.8 20.5 273 627-905 9-311 (396)
150 3uc3_A Serine/threonine-protei 100.0 9.4E-39 3.2E-43 361.1 21.9 250 626-897 19-275 (361)
151 3ttj_A Mitogen-activated prote 100.0 8.8E-39 3E-43 372.9 22.3 259 626-896 61-355 (464)
152 2ozo_A Tyrosine-protein kinase 100.0 1.2E-38 4.1E-43 384.2 24.2 259 628-906 336-601 (613)
153 2ac3_A MAP kinase-interacting 100.0 9.2E-39 3.1E-43 354.5 21.4 255 627-896 12-295 (316)
154 1u5q_A Serine/threonine protei 100.0 4.8E-39 1.6E-43 361.5 19.3 246 627-897 54-306 (348)
155 3gxj_A TGF-beta receptor type- 100.0 1.4E-40 4.7E-45 366.6 6.5 262 626-906 2-300 (303)
156 3i6u_A CDS1, serine/threonine- 100.0 6.1E-39 2.1E-43 370.1 20.4 253 624-896 132-399 (419)
157 4agu_A Cyclin-dependent kinase 100.0 1.9E-38 6.5E-43 351.1 23.6 263 627-896 3-284 (311)
158 3fdn_A Serine/threonine-protei 100.0 5.4E-39 1.9E-43 349.7 18.9 253 626-905 8-264 (279)
159 2w1i_A JAK2; chromosomal rearr 100.0 1.6E-39 5.6E-44 362.3 15.1 262 626-904 40-323 (326)
160 2yfx_A Tyrosine-protein kinase 100.0 6.2E-39 2.1E-43 357.8 19.7 262 626-905 29-306 (327)
161 3cok_A Serine/threonine-protei 100.0 4.8E-39 1.6E-43 349.9 18.1 249 626-896 10-262 (278)
162 3bhy_A Death-associated protei 100.0 2.5E-38 8.5E-43 345.1 23.8 256 627-902 5-273 (283)
163 3oz6_A Mitogen-activated prote 100.0 5.5E-39 1.9E-43 367.2 19.2 263 624-896 6-328 (388)
164 3dls_A PAS domain-containing s 100.0 5.2E-39 1.8E-43 359.5 18.4 243 625-897 22-275 (335)
165 1byg_A CSK, protein (C-termina 100.0 4.4E-39 1.5E-43 350.2 17.4 254 626-905 20-275 (278)
166 2r5t_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 365.0 17.4 247 626-895 37-288 (373)
167 3lm5_A Serine/threonine-protei 100.0 1.2E-38 4.1E-43 355.5 21.3 257 622-896 23-287 (327)
168 1fvr_A Tyrosine-protein kinase 100.0 1.8E-38 6.1E-43 354.1 22.6 259 627-906 25-303 (327)
169 3kn6_A Ribosomal protein S6 ki 100.0 8.6E-39 2.9E-43 356.2 19.9 244 632-896 16-270 (325)
170 2qr7_A Ribosomal protein S6 ki 100.0 9.1E-39 3.1E-43 358.2 20.0 251 625-897 20-278 (342)
171 3ll6_A Cyclin G-associated kin 100.0 1.8E-39 6.2E-44 363.2 14.0 266 624-909 25-314 (337)
172 3is5_A Calcium-dependent prote 100.0 1.4E-38 4.7E-43 347.8 20.6 251 626-896 21-278 (285)
173 3rgz_A Protein brassinosteroid 100.0 1.2E-38 4.1E-43 396.1 22.8 350 64-424 318-744 (768)
174 2rku_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 348.8 20.9 249 626-897 14-266 (294)
175 2jam_A Calcium/calmodulin-depe 100.0 2E-38 6.7E-43 349.9 21.4 250 626-896 8-261 (304)
176 3mtl_A Cell division protein k 100.0 6.4E-39 2.2E-43 357.2 16.9 261 627-896 2-281 (324)
177 1ua2_A CAK, cell division prot 100.0 3.4E-38 1.1E-42 354.8 22.9 266 624-897 7-292 (346)
178 2buj_A Serine/threonine-protei 100.0 5.4E-39 1.9E-43 356.5 16.2 258 625-902 27-305 (317)
179 2r3i_A Cell division protein k 100.0 2.9E-38 9.9E-43 347.5 21.8 263 627-896 3-283 (299)
180 2owb_A Serine/threonine-protei 100.0 1.7E-38 5.6E-43 355.6 20.1 249 626-897 40-292 (335)
181 3vq2_A TLR4, TOLL-like recepto 100.0 6.1E-38 2.1E-42 380.1 26.6 197 233-430 392-594 (606)
182 2wtk_C Serine/threonine-protei 100.0 5.8E-38 2E-42 346.1 24.0 252 626-897 4-264 (305)
183 4fl3_A Tyrosine-protein kinase 100.0 2.1E-38 7.3E-43 383.0 22.3 251 633-904 375-632 (635)
184 2pml_X PFPK7, Ser/Thr protein 100.0 1.6E-38 5.4E-43 357.7 19.7 263 626-896 30-322 (348)
185 2y7j_A Phosphorylase B kinase 100.0 4.5E-38 1.5E-42 356.2 23.4 258 619-896 86-359 (365)
186 2clq_A Mitogen-activated prote 100.0 5.2E-38 1.8E-42 344.7 23.2 252 627-896 22-278 (295)
187 1t4h_A Serine/threonine-protei 100.0 5.3E-38 1.8E-42 343.9 23.0 248 628-896 27-282 (290)
188 3pg1_A Mitogen-activated prote 100.0 2.5E-38 8.7E-43 358.1 20.7 272 617-896 12-316 (362)
189 3j0a_A TOLL-like receptor 5; m 100.0 8.4E-38 2.9E-42 392.5 27.6 119 55-174 15-136 (844)
190 3a7i_A MST3 kinase, serine/thr 100.0 6.7E-38 2.3E-42 345.4 23.5 249 626-897 21-271 (303)
191 2vgo_A Serine/threonine-protei 100.0 2.6E-38 8.8E-43 345.3 19.9 246 627-897 14-263 (284)
192 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.5E-38 8.7E-43 372.7 21.1 246 626-891 184-438 (543)
193 1x8b_A WEE1HU, WEE1-like prote 100.0 1.9E-38 6.3E-43 346.5 18.5 244 626-896 10-279 (289)
194 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.8E-38 6E-43 354.5 18.6 264 624-896 31-318 (329)
195 2h6d_A 5'-AMP-activated protei 100.0 4.7E-38 1.6E-42 341.6 21.4 248 626-897 10-262 (276)
196 1vzo_A Ribosomal protein S6 ki 100.0 1.4E-38 4.8E-43 359.1 17.7 251 626-897 53-322 (355)
197 3an0_A Dual specificity mitoge 100.0 9.1E-39 3.1E-43 358.5 16.0 254 623-896 47-310 (340)
198 3sv0_A Casein kinase I-like; t 100.0 6.7E-38 2.3E-42 365.7 23.8 264 626-906 6-281 (483)
199 3rp9_A Mitogen-activated prote 100.0 3.3E-38 1.1E-42 368.9 21.2 195 626-826 52-280 (458)
200 4aaa_A Cyclin-dependent kinase 100.0 2.6E-38 9E-43 353.4 19.4 264 626-896 24-306 (331)
201 2x7f_A TRAF2 and NCK-interacti 100.0 2.7E-38 9.1E-43 352.4 18.9 260 617-896 14-286 (326)
202 3lij_A Calcium/calmodulin depe 100.0 6.2E-38 2.1E-42 369.9 23.0 250 626-896 36-291 (494)
203 1cm8_A Phosphorylated MAP kina 100.0 4.5E-38 1.5E-42 356.3 20.7 258 626-896 24-307 (367)
204 3eqc_A Dual specificity mitoge 100.0 3.6E-38 1.2E-42 356.6 19.8 199 626-833 32-233 (360)
205 2xrw_A Mitogen-activated prote 100.0 5.8E-38 2E-42 356.3 21.4 259 626-896 24-318 (371)
206 3nyv_A Calmodulin-domain prote 100.0 4.3E-38 1.5E-42 370.6 21.0 251 626-897 25-282 (484)
207 3fme_A Dual specificity mitoge 100.0 4.3E-38 1.5E-42 344.4 19.5 251 626-896 6-266 (290)
208 2ycf_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 350.9 19.1 249 625-896 8-274 (322)
209 3q5i_A Protein kinase; CDPK, m 100.0 9E-38 3.1E-42 369.4 23.4 252 625-897 34-302 (504)
210 3byv_A Rhoptry kinase; malaria 100.0 4E-39 1.4E-43 366.7 11.4 241 626-896 72-359 (377)
211 3mwu_A Calmodulin-domain prote 100.0 7E-38 2.4E-42 368.7 21.7 251 626-897 21-277 (486)
212 3n9x_A Phosphotransferase; mal 100.0 8.4E-38 2.9E-42 362.1 21.8 199 626-830 25-252 (432)
213 2w5a_A Serine/threonine-protei 100.0 3.4E-38 1.2E-42 343.3 17.4 256 626-898 5-269 (279)
214 3mi9_A Cell division protein k 100.0 1.4E-37 4.7E-42 350.6 22.9 265 627-896 17-311 (351)
215 1blx_A Cyclin-dependent kinase 100.0 7.5E-38 2.6E-42 348.7 20.1 266 624-896 8-296 (326)
216 2vwi_A Serine/threonine-protei 100.0 2.6E-38 8.9E-43 348.3 16.2 263 625-896 13-287 (303)
217 3cek_A Dual specificity protei 100.0 3.2E-38 1.1E-42 349.7 17.0 262 616-897 17-293 (313)
218 2j7t_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 346.4 18.1 252 626-896 18-275 (302)
219 3nsz_A CK II alpha, casein kin 100.0 1E-37 3.6E-42 348.2 21.1 254 626-896 35-319 (330)
220 3kvw_A DYRK2, dual specificity 100.0 9E-38 3.1E-42 361.2 21.1 198 626-833 96-302 (429)
221 3com_A Serine/threonine-protei 100.0 2.4E-37 8.3E-42 342.7 23.3 251 625-896 27-278 (314)
222 3eb0_A Putative uncharacterize 100.0 1.2E-37 4.1E-42 355.4 21.1 263 623-896 3-321 (383)
223 1phk_A Phosphorylase kinase; g 100.0 1.9E-37 6.5E-42 340.8 21.9 252 625-896 15-283 (298)
224 1u46_A ACK-1, activated CDC42 100.0 4.5E-38 1.5E-42 344.5 16.5 259 626-903 17-284 (291)
225 1zy4_A Serine/threonine-protei 100.0 1.4E-37 5E-42 342.1 20.7 252 626-896 5-283 (303)
226 3pfq_A PKC-B, PKC-beta, protei 100.0 8.9E-38 3E-42 380.1 20.4 249 625-896 339-597 (674)
227 3qyz_A Mitogen-activated prote 100.0 7.6E-38 2.6E-42 354.5 18.1 265 625-896 25-313 (364)
228 2fst_X Mitogen-activated prote 100.0 6.3E-38 2.1E-42 354.9 16.9 258 626-896 28-311 (367)
229 3q60_A ROP5B; pseudokinase, tr 100.0 3.1E-38 1.1E-42 358.6 14.3 252 627-896 62-352 (371)
230 2j0j_A Focal adhesion kinase 1 100.0 2.3E-37 8E-42 375.3 21.8 262 623-905 386-653 (656)
231 2i6l_A Mitogen-activated prote 100.0 1.1E-37 3.8E-42 346.0 17.5 263 626-896 10-305 (320)
232 1z57_A Dual specificity protei 100.0 4.6E-37 1.6E-41 343.8 22.6 261 626-896 13-328 (339)
233 1wak_A Serine/threonine-protei 100.0 1.8E-37 6.2E-42 355.4 19.6 261 626-896 36-391 (397)
234 2id5_A Lingo-1, leucine rich r 100.0 1.3E-36 4.3E-41 357.5 26.7 323 69-403 16-343 (477)
235 4exu_A Mitogen-activated prote 100.0 4.4E-37 1.5E-41 349.0 21.9 257 626-896 41-323 (371)
236 1j1b_A Glycogen synthase kinas 100.0 4E-37 1.4E-41 354.9 21.7 258 627-896 54-336 (420)
237 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.2E-38 2.1E-42 348.2 14.4 264 621-905 27-304 (319)
238 4e7w_A Glycogen synthase kinas 100.0 3.3E-37 1.1E-41 352.7 20.4 259 627-896 40-321 (394)
239 1ziw_A TOLL-like receptor 3; i 100.0 2.6E-36 8.8E-41 371.0 29.6 366 64-430 248-660 (680)
240 3e3p_A Protein kinase, putativ 100.0 3.6E-37 1.2E-41 348.2 19.7 269 620-896 16-314 (360)
241 2b9h_A MAP kinase FUS3, mitoge 100.0 4.1E-37 1.4E-41 346.8 19.6 263 626-896 10-305 (353)
242 3fhr_A MAP kinase-activated pr 100.0 6.6E-37 2.3E-41 342.7 21.2 251 626-897 27-288 (336)
243 2wei_A Calmodulin-domain prote 100.0 7.9E-37 2.7E-41 334.1 20.2 251 625-896 20-276 (287)
244 3rgf_A Cyclin-dependent kinase 100.0 7.1E-37 2.4E-41 351.6 20.8 263 628-896 21-333 (405)
245 1q8y_A SR protein kinase; tran 100.0 6.5E-37 2.2E-41 347.9 19.7 261 626-896 18-333 (373)
246 3aln_A Dual specificity mitoge 100.0 4.4E-37 1.5E-41 342.8 17.8 254 626-896 21-285 (327)
247 2vx3_A Dual specificity tyrosi 100.0 2E-36 6.8E-41 345.1 23.5 203 624-834 51-262 (382)
248 4g8a_A TOLL-like receptor 4; l 100.0 2.9E-36 9.9E-41 367.0 26.0 362 64-433 52-619 (635)
249 3coi_A Mitogen-activated prote 100.0 1.6E-36 5.5E-41 342.1 21.8 257 626-896 23-305 (353)
250 2dyl_A Dual specificity mitoge 100.0 1.7E-36 6E-41 336.3 21.4 251 626-896 24-283 (318)
251 2iwi_A Serine/threonine-protei 100.0 6.1E-37 2.1E-41 339.2 17.4 245 621-896 25-283 (312)
252 3a99_A Proto-oncogene serine/t 100.0 2.9E-37 9.9E-42 343.2 14.1 246 620-896 36-293 (320)
253 2rio_A Serine/threonine-protei 100.0 1.2E-36 4.2E-41 352.5 19.8 251 628-896 16-295 (434)
254 2eu9_A Dual specificity protei 100.0 2.7E-36 9.1E-41 340.1 21.7 261 626-896 18-333 (355)
255 2id5_A Lingo-1, leucine rich r 100.0 4.1E-36 1.4E-40 353.1 24.2 334 55-397 12-360 (477)
256 3p23_A Serine/threonine-protei 100.0 1.6E-36 5.5E-41 350.6 19.7 250 626-896 23-283 (432)
257 4eco_A Uncharacterized protein 100.0 5.5E-36 1.9E-40 363.9 22.4 318 62-393 247-599 (636)
258 2z81_A CD282 antigen, TOLL-lik 100.0 4.3E-36 1.5E-40 359.4 19.9 357 54-424 4-539 (549)
259 3t6q_A CD180 antigen; protein- 100.0 7.1E-36 2.4E-40 362.0 21.9 332 90-430 256-596 (606)
260 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.1E-35 1E-39 352.9 26.6 326 64-405 52-523 (562)
261 2z7x_B TOLL-like receptor 1, v 100.0 3.4E-36 1.2E-40 357.9 17.9 350 64-425 21-511 (520)
262 3qa8_A MGC80376 protein; kinas 100.0 1.3E-36 4.5E-41 361.9 13.7 272 627-905 14-311 (676)
263 3o6n_A APL1; leucine-rich repe 100.0 1.8E-35 6.2E-40 338.2 20.1 339 44-405 4-364 (390)
264 2pzi_A Probable serine/threoni 100.0 1E-35 3.6E-40 364.3 19.2 240 626-902 79-327 (681)
265 3oja_B Anopheles plasmodium-re 100.0 2.5E-35 8.5E-40 355.9 20.4 338 44-404 10-369 (597)
266 2z63_A TOLL-like receptor 4, v 100.0 8.8E-35 3E-39 349.6 24.6 205 215-424 346-560 (570)
267 3uqc_A Probable conserved tran 100.0 8.5E-35 2.9E-39 317.6 20.9 234 626-905 30-267 (286)
268 3t6q_A CD180 antigen; protein- 100.0 3.6E-34 1.2E-38 347.0 28.2 310 56-375 14-415 (606)
269 3v47_A TOLL-like receptor 5B a 100.0 1.8E-34 6.2E-39 336.9 21.8 305 63-376 53-411 (455)
270 3m2w_A MAP kinase-activated pr 100.0 1.6E-34 5.5E-39 317.9 20.1 230 626-896 16-256 (299)
271 3dzo_A Rhoptry kinase domain; 100.0 7.2E-35 2.5E-39 335.4 16.3 240 626-895 77-362 (413)
272 2vuw_A Serine/threonine-protei 100.0 4.9E-35 1.7E-39 327.6 12.3 242 626-895 19-329 (336)
273 4ecn_A Leucine-rich repeat pro 100.0 2.8E-33 9.5E-38 346.1 21.8 318 62-398 489-871 (876)
274 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-32 4.4E-37 338.1 26.5 310 55-372 5-365 (680)
275 3vq2_A TLR4, TOLL-like recepto 100.0 3.2E-32 1.1E-36 330.0 25.4 163 211-375 394-560 (606)
276 2z7x_B TOLL-like receptor 1, v 100.0 1.3E-32 4.4E-37 327.0 21.0 308 67-393 3-433 (520)
277 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8E-32 2.7E-36 323.2 25.9 309 66-393 33-485 (562)
278 4fcg_A Uncharacterized protein 100.0 9.8E-33 3.4E-37 307.4 15.3 274 21-348 21-313 (328)
279 3j0a_A TOLL-like receptor 5; m 100.0 1E-31 3.4E-36 337.3 25.9 316 67-392 7-373 (844)
280 2z81_A CD282 antigen, TOLL-lik 100.0 2.5E-32 8.6E-37 326.7 17.7 320 59-393 2-422 (549)
281 3o6n_A APL1; leucine-rich repe 100.0 1.5E-31 5.3E-36 305.6 22.7 306 64-396 69-377 (390)
282 2z63_A TOLL-like receptor 4, v 100.0 7.4E-32 2.5E-36 324.1 20.9 184 191-375 347-533 (570)
283 1xku_A Decorin; proteoglycan, 100.0 5E-31 1.7E-35 294.3 24.4 288 66-371 33-330 (330)
284 4fmz_A Internalin; leucine ric 100.0 4.3E-31 1.5E-35 296.8 23.1 301 64-393 44-345 (347)
285 1ogq_A PGIP-2, polygalacturona 100.0 5E-32 1.7E-36 299.8 15.0 252 89-398 51-309 (313)
286 2ft3_A Biglycan; proteoglycan, 100.0 2.8E-31 9.7E-36 296.5 21.3 287 66-371 35-331 (332)
287 3oja_B Anopheles plasmodium-re 100.0 3.2E-31 1.1E-35 319.9 22.5 287 64-377 75-362 (597)
288 1xku_A Decorin; proteoglycan, 100.0 1.4E-30 4.7E-35 290.6 25.7 279 54-347 31-330 (330)
289 2ft3_A Biglycan; proteoglycan, 100.0 6.7E-31 2.3E-35 293.4 22.4 265 89-373 34-307 (332)
290 3bz5_A Internalin-J, INLJ; leu 100.0 1.9E-30 6.4E-35 302.0 26.7 298 63-395 41-353 (457)
291 1o6v_A Internalin A; bacterial 100.0 1.7E-30 5.8E-35 304.2 24.4 296 64-392 68-364 (466)
292 1o6v_A Internalin A; bacterial 100.0 4.6E-30 1.6E-34 300.5 25.8 299 64-395 46-345 (466)
293 4fmz_A Internalin; leucine ric 100.0 4.3E-30 1.5E-34 288.7 23.6 283 63-374 65-347 (347)
294 2z80_A TOLL-like receptor 2, v 100.0 1E-30 3.5E-35 294.6 13.3 288 45-373 22-314 (353)
295 3zyi_A Leucine-rich repeat-con 100.0 1.1E-29 3.9E-34 296.0 21.6 262 138-431 76-339 (452)
296 3zyj_A Leucine-rich repeat-con 100.0 2.5E-29 8.7E-34 292.0 23.2 280 91-430 46-327 (440)
297 4g8a_A TOLL-like receptor 4; l 100.0 5.7E-29 2E-33 302.6 24.6 308 64-374 76-581 (635)
298 3bz5_A Internalin-J, INLJ; leu 100.0 9.5E-29 3.3E-33 287.6 24.0 289 63-392 63-366 (457)
299 1jl5_A Outer protein YOPM; leu 100.0 4.8E-29 1.6E-33 289.8 20.4 294 63-393 10-349 (454)
300 2z66_A Variable lymphocyte rec 100.0 1.3E-29 4.6E-34 279.4 14.8 249 54-348 7-260 (306)
301 2z66_A Variable lymphocyte rec 100.0 3.4E-29 1.2E-33 276.2 17.6 280 116-428 10-295 (306)
302 1ozn_A Reticulon 4 receptor; N 100.0 2.2E-28 7.4E-33 266.9 14.9 264 57-333 4-269 (285)
303 3zyj_A Leucine-rich repeat-con 100.0 2.8E-27 9.4E-32 274.8 24.5 244 68-324 47-291 (440)
304 4fcg_A Uncharacterized protein 99.9 6.7E-28 2.3E-32 268.4 16.1 238 87-376 80-317 (328)
305 4azs_A Methyltransferase WBDD; 99.9 2.2E-29 7.4E-34 299.8 4.2 185 634-829 241-437 (569)
306 3g06_A SSPH2 (leucine-rich rep 99.9 2.1E-27 7.3E-32 284.5 21.4 281 45-378 14-302 (622)
307 3zyi_A Leucine-rich repeat-con 99.9 5.5E-27 1.9E-31 273.3 24.2 244 69-325 59-303 (452)
308 1wwl_A Monocyte differentiatio 99.9 3.4E-29 1.2E-33 277.0 4.9 249 84-374 39-310 (312)
309 1jl5_A Outer protein YOPM; leu 99.9 4.9E-27 1.7E-31 273.0 21.3 272 82-393 5-289 (454)
310 1wwl_A Monocyte differentiatio 99.9 7.5E-29 2.5E-33 274.3 1.5 264 44-350 22-310 (312)
311 3o53_A Protein LRIM1, AGAP0063 99.9 2.5E-28 8.6E-33 270.6 4.8 261 92-374 14-277 (317)
312 3o53_A Protein LRIM1, AGAP0063 99.9 1.6E-28 5.4E-33 272.3 3.1 237 115-373 12-250 (317)
313 1ozn_A Reticulon 4 receptor; N 99.9 1E-26 3.5E-31 253.6 16.7 222 117-349 15-238 (285)
314 2z80_A TOLL-like receptor 2, v 99.9 1.1E-26 3.6E-31 261.7 12.9 296 90-424 33-343 (353)
315 3oja_A Leucine-rich immune mol 99.9 3.6E-27 1.2E-31 276.7 8.9 219 110-349 31-250 (487)
316 1z7x_W Ribonuclease inhibitor; 99.9 3.2E-29 1.1E-33 293.0 -13.1 328 64-395 28-412 (461)
317 1p9a_G Platelet glycoprotein I 99.9 4.3E-25 1.5E-29 241.1 20.4 214 187-407 6-222 (290)
318 3oja_A Leucine-rich immune mol 99.9 1.8E-26 6.3E-31 270.7 9.4 253 70-344 16-270 (487)
319 3g06_A SSPH2 (leucine-rich rep 99.9 2.4E-24 8.3E-29 258.0 26.7 259 88-397 40-300 (622)
320 2o6q_A Variable lymphocyte rec 99.9 6.3E-25 2.1E-29 237.4 19.2 215 51-301 3-219 (270)
321 3en9_A Glycoprotease, O-sialog 99.9 3.7E-26 1.3E-30 270.5 8.0 184 631-830 340-538 (540)
322 1z7x_W Ribonuclease inhibitor; 99.9 3.4E-28 1.2E-32 284.3 -11.2 329 64-394 3-383 (461)
323 2z62_A TOLL-like receptor 4, v 99.9 3.2E-24 1.1E-28 232.6 19.1 197 225-425 61-267 (276)
324 2o6q_A Variable lymphocyte rec 99.9 4.6E-24 1.6E-28 230.7 19.8 208 193-405 18-231 (270)
325 2z62_A TOLL-like receptor 4, v 99.9 3.5E-24 1.2E-28 232.3 18.0 212 79-325 21-237 (276)
326 4glp_A Monocyte differentiatio 99.9 6E-24 2E-28 234.6 11.4 227 114-374 65-308 (310)
327 3rfs_A Internalin B, repeat mo 99.9 2E-23 7E-28 225.8 14.9 224 112-356 18-242 (272)
328 3rfs_A Internalin B, repeat mo 99.9 7.8E-24 2.7E-28 229.1 10.7 227 89-337 20-247 (272)
329 1p9a_G Platelet glycoprotein I 99.9 2E-22 6.8E-27 219.9 21.3 134 238-374 75-209 (290)
330 4glp_A Monocyte differentiatio 99.9 1.4E-23 4.6E-28 231.8 11.4 200 114-325 92-307 (310)
331 3m19_A Variable lymphocyte rec 99.9 9E-23 3.1E-27 217.9 15.5 188 53-300 4-192 (251)
332 1zar_A RIO2 kinase; serine kin 99.9 4.3E-23 1.5E-27 223.9 12.9 153 619-803 82-252 (282)
333 2xwt_C Thyrotropin receptor; s 99.9 1.2E-22 4E-27 215.4 14.7 203 79-297 25-236 (239)
334 3m19_A Variable lymphocyte rec 99.9 6.1E-22 2.1E-26 211.5 18.9 178 192-374 15-193 (251)
335 2ast_B S-phase kinase-associat 99.9 6.6E-25 2.3E-29 245.1 -4.4 269 51-358 34-315 (336)
336 3cvr_A Invasion plasmid antige 99.9 7E-23 2.4E-27 242.3 11.6 210 45-336 35-254 (571)
337 2xwt_C Thyrotropin receptor; s 99.9 5.1E-22 1.7E-26 210.4 16.1 197 192-392 32-237 (239)
338 3goz_A Leucine-rich repeat-con 99.9 2.5E-24 8.5E-29 243.2 -2.8 105 69-174 3-122 (362)
339 1h6u_A Internalin H; cell adhe 99.9 6E-22 2E-26 218.3 15.2 217 112-377 18-234 (308)
340 3goz_A Leucine-rich repeat-con 99.9 9.4E-24 3.2E-28 238.4 -2.4 259 92-353 2-301 (362)
341 1h6u_A Internalin H; cell adhe 99.9 1.4E-21 4.8E-26 215.3 13.6 196 109-351 37-232 (308)
342 2ca6_A RAN GTPase-activating p 99.9 9.5E-24 3.2E-28 240.6 -4.8 67 308-374 240-317 (386)
343 2ca6_A RAN GTPase-activating p 99.9 1.2E-23 4.3E-28 239.6 -4.5 243 104-352 23-319 (386)
344 4ay9_X Follicle-stimulating ho 99.8 7.4E-21 2.5E-25 213.6 17.7 248 116-399 12-264 (350)
345 2ast_B S-phase kinase-associat 99.8 6.2E-23 2.1E-27 229.1 -1.4 250 115-380 49-313 (336)
346 4ay9_X Follicle-stimulating ho 99.8 3.8E-21 1.3E-25 216.0 12.8 218 140-392 12-234 (350)
347 2o6s_A Variable lymphocyte rec 99.8 6E-21 2.1E-25 197.5 12.4 183 54-264 7-189 (208)
348 2xot_A Amphoterin-induced prot 99.8 7.5E-21 2.6E-25 214.5 10.7 202 220-425 22-235 (361)
349 3ogk_B Coronatine-insensitive 99.8 1.1E-22 3.6E-27 245.5 -6.0 319 66-393 140-525 (592)
350 3ogk_B Coronatine-insensitive 99.8 3.3E-22 1.1E-26 241.1 -5.0 304 64-376 164-529 (592)
351 2v9t_B SLIT homolog 2 protein 99.8 1.1E-19 3.9E-24 189.6 14.7 161 221-405 16-177 (220)
352 2o6s_A Variable lymphocyte rec 99.8 7.9E-20 2.7E-24 189.1 13.2 179 117-337 11-190 (208)
353 4b8c_D Glucose-repressible alc 99.8 1.2E-20 4.2E-25 231.3 4.7 271 25-350 130-405 (727)
354 3cvr_A Invasion plasmid antige 99.8 2.6E-19 8.9E-24 211.8 15.7 187 138-359 60-253 (571)
355 1h6t_A Internalin B; cell adhe 99.8 2.2E-19 7.5E-24 196.0 13.6 177 187-378 42-218 (291)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 3.4E-19 1.2E-23 186.0 14.0 162 220-405 15-178 (220)
357 1zth_A RIO1 serine protein kin 99.8 5.6E-19 1.9E-23 189.1 13.4 136 629-778 49-219 (258)
358 1dce_A Protein (RAB geranylger 99.8 2.9E-21 9.9E-26 229.7 -5.2 121 242-367 443-567 (567)
359 1m9s_A Internalin B; cell inva 99.8 5.5E-19 1.9E-23 211.3 13.9 195 112-353 20-214 (605)
360 2p1m_B Transport inhibitor res 99.8 3.8E-22 1.3E-26 240.7 -13.8 328 63-393 104-518 (594)
361 1m9s_A Internalin B; cell inva 99.8 7.3E-19 2.5E-23 210.3 14.8 199 161-382 21-219 (605)
362 2xot_A Amphoterin-induced prot 99.8 6.6E-19 2.3E-23 198.5 13.1 175 195-374 22-203 (361)
363 1h6t_A Internalin B; cell adhe 99.8 4.3E-19 1.5E-23 193.6 10.1 193 112-351 23-215 (291)
364 3e6j_A Variable lymphocyte rec 99.8 1.8E-18 6.1E-23 181.7 13.9 163 45-254 11-173 (229)
365 1dce_A Protein (RAB geranylger 99.8 9.3E-21 3.2E-25 225.4 -5.1 205 110-343 346-567 (567)
366 2v9t_B SLIT homolog 2 protein 99.8 5.8E-18 2E-22 176.6 16.3 152 194-350 14-166 (220)
367 3e6j_A Variable lymphocyte rec 99.7 1.4E-17 4.9E-22 174.8 17.3 149 220-373 23-172 (229)
368 2v70_A SLIT-2, SLIT homolog 2 99.7 1.1E-17 3.7E-22 174.6 14.9 152 195-351 15-168 (220)
369 2p1m_B Transport inhibitor res 99.7 3.8E-20 1.3E-24 223.2 -7.4 302 64-374 130-520 (594)
370 1xeu_A Internalin C; cellular 99.7 1.6E-17 5.5E-22 178.3 13.1 174 159-378 17-190 (263)
371 1xeu_A Internalin C; cellular 99.7 1.1E-17 3.6E-22 179.7 10.3 168 111-299 17-184 (263)
372 3sb4_A Hypothetical leucine ri 99.7 8.4E-18 2.9E-22 186.9 7.8 280 78-379 13-316 (329)
373 1w8a_A SLIT protein; signaling 99.7 8E-17 2.7E-21 164.2 13.0 160 243-430 11-172 (192)
374 2wfh_A SLIT homolog 2 protein 99.7 7.6E-17 2.6E-21 164.4 11.7 139 266-430 33-172 (193)
375 4ezg_A Putative uncharacterize 99.7 5.3E-17 1.8E-21 166.3 10.1 153 133-324 40-193 (197)
376 4ezg_A Putative uncharacterize 99.7 1.2E-16 3.9E-21 163.7 12.3 131 236-373 62-194 (197)
377 4b8c_D Glucose-repressible alc 99.7 1.2E-17 4.1E-22 204.8 3.8 168 66-250 193-369 (727)
378 4gyi_A RIO2 kinase; protein ki 99.6 5.3E-16 1.8E-20 172.4 13.1 138 628-778 96-265 (397)
379 1w8a_A SLIT protein; signaling 99.6 5.8E-16 2E-20 157.8 10.5 110 241-351 30-141 (192)
380 3sb4_A Hypothetical leucine ri 99.6 6.8E-16 2.3E-20 171.5 11.5 284 65-367 26-328 (329)
381 2ell_A Acidic leucine-rich nuc 99.6 6.9E-16 2.4E-20 153.5 10.4 136 240-377 24-164 (168)
382 4fdw_A Leucine rich hypothetic 99.6 1.4E-14 4.9E-19 164.6 21.1 262 88-371 113-381 (401)
383 2ell_A Acidic leucine-rich nuc 99.6 2.4E-15 8.1E-20 149.6 10.0 135 216-352 24-163 (168)
384 2je0_A Acidic leucine-rich nuc 99.6 2.3E-15 7.8E-20 146.5 8.4 128 240-369 17-149 (149)
385 4fdw_A Leucine rich hypothetic 99.6 4.1E-14 1.4E-18 160.9 19.8 262 67-350 116-384 (401)
386 2wfh_A SLIT homolog 2 protein 99.6 2E-14 6.7E-19 146.5 13.9 125 221-350 15-140 (193)
387 2o6r_A Variable lymphocyte rec 99.5 4.4E-14 1.5E-18 141.7 15.2 129 219-374 10-138 (177)
388 2je0_A Acidic leucine-rich nuc 99.5 4.1E-15 1.4E-19 144.7 7.0 128 216-345 17-149 (149)
389 2o6r_A Variable lymphocyte rec 99.5 4.2E-14 1.4E-18 141.9 14.1 131 194-329 10-141 (177)
390 1a9n_A U2A', U2A'; complex (nu 99.5 2.5E-14 8.7E-19 143.4 8.0 136 236-375 15-155 (176)
391 1ds9_A Outer arm dynein; leuci 99.5 8.2E-16 2.8E-20 157.5 -5.8 133 113-257 18-157 (198)
392 3g39_A Variable lymphocyte rec 99.5 1.7E-13 6E-18 136.4 11.1 104 267-373 12-115 (170)
393 1a9n_A U2A', U2A'; complex (nu 99.5 8.2E-14 2.8E-18 139.6 8.5 129 216-350 19-154 (176)
394 1ds9_A Outer arm dynein; leuci 99.4 4.2E-16 1.5E-20 159.6 -9.7 161 187-373 14-185 (198)
395 2r9u_A Variable lymphocyte rec 99.4 2.9E-12 9.9E-17 128.0 12.5 87 287-374 33-119 (174)
396 2r9u_A Variable lymphocyte rec 99.4 2.1E-12 7E-17 129.1 11.0 111 57-174 8-118 (174)
397 3g39_A Variable lymphocyte rec 99.4 3.4E-12 1.2E-16 127.0 12.3 86 264-350 30-116 (170)
398 4fs7_A Uncharacterized protein 99.3 8.6E-11 2.9E-15 133.7 23.7 302 65-391 72-376 (394)
399 3tm0_A Aminoglycoside 3'-phosp 99.3 9.5E-12 3.2E-16 133.1 13.2 148 622-777 9-213 (263)
400 2ifg_A High affinity nerve gro 99.3 9.1E-12 3.1E-16 139.2 11.3 130 270-425 14-146 (347)
401 1nd4_A Aminoglycoside 3'-phosp 99.2 2.9E-11 1E-15 128.9 10.9 138 627-777 20-214 (264)
402 4fs7_A Uncharacterized protein 99.2 7.6E-10 2.6E-14 125.8 21.5 287 64-375 94-380 (394)
403 2ifg_A High affinity nerve gro 99.2 2E-11 6.9E-16 136.3 8.2 103 196-301 13-117 (347)
404 3un9_A NLR family member X1; l 99.2 3.9E-13 1.3E-17 151.3 -6.5 38 137-174 72-114 (372)
405 4gt6_A Cell surface protein; l 99.2 2.1E-09 7.1E-14 122.2 23.5 289 66-372 66-369 (394)
406 3un9_A NLR family member X1; l 99.1 5.6E-13 1.9E-17 150.0 -7.6 140 191-330 101-257 (372)
407 4gt6_A Cell surface protein; l 99.0 1.9E-08 6.6E-13 114.2 23.0 290 82-392 57-368 (394)
408 3dxp_A Putative acyl-COA dehyd 99.0 9.5E-10 3.2E-14 123.3 11.5 142 632-778 43-249 (359)
409 3sg8_A APH(2'')-ID; antibiotic 98.9 7.4E-10 2.5E-14 121.1 6.7 187 632-830 25-287 (304)
410 4h09_A Hypothetical leucine ri 98.9 1.6E-07 5.4E-12 105.9 23.1 295 64-380 46-352 (379)
411 2ra8_A Uncharacterized protein 98.8 2.6E-10 8.8E-15 127.2 -2.3 82 215-298 251-341 (362)
412 4h09_A Hypothetical leucine ri 98.7 7.4E-07 2.5E-11 100.4 22.0 284 83-388 41-340 (379)
413 2ra8_A Uncharacterized protein 98.7 2.6E-09 8.9E-14 119.1 0.9 34 239-272 192-227 (362)
414 3d1u_A Putative fructosamine-3 98.7 1.3E-07 4.6E-12 102.0 13.3 140 631-776 19-215 (288)
415 3rw6_A Nuclear RNA export fact 98.6 2.8E-10 9.6E-15 120.5 -8.1 147 52-208 77-237 (267)
416 3r70_A Aminoglycoside phosphot 98.6 2E-07 7E-12 102.4 14.5 137 628-778 38-238 (320)
417 3tdw_A Gentamicin resistance p 98.4 1.6E-06 5.5E-11 94.5 14.4 136 632-777 24-224 (306)
418 4gkh_A Aminoglycoside 3'-phosp 98.4 1.6E-06 5.6E-11 92.5 13.4 136 633-777 30-223 (272)
419 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.8E-06 9.5E-11 94.9 13.6 143 629-777 43-243 (362)
420 3ats_A Putative uncharacterize 98.3 1.5E-06 5.1E-11 97.0 10.7 80 633-712 26-122 (357)
421 1io0_A Tropomodulin; LRR prote 98.2 1.3E-07 4.3E-12 95.1 -0.6 66 235-300 31-106 (185)
422 3rw6_A Nuclear RNA export fact 98.2 6E-08 2E-12 102.6 -3.7 43 237-279 167-211 (267)
423 1io0_A Tropomodulin; LRR prote 98.2 1E-07 3.5E-12 95.7 -2.0 120 255-374 27-165 (185)
424 2olc_A MTR kinase, methylthior 98.0 2.5E-05 8.4E-10 88.4 12.7 75 632-708 35-120 (397)
425 2q83_A YTAA protein; 2635576, 98.0 2.3E-05 7.7E-10 86.6 11.3 139 633-776 38-251 (346)
426 3jr1_A Putative fructosamine-3 97.9 5.1E-05 1.7E-09 82.5 12.0 137 632-773 41-232 (312)
427 3f7w_A Putative fructosamine-3 97.9 4.7E-05 1.6E-09 82.0 11.2 78 629-710 17-97 (288)
428 3rfe_A Platelet glycoprotein I 97.8 2.1E-05 7.1E-10 73.7 6.8 72 337-431 32-104 (130)
429 2ppq_A HSK, HK, homoserine kin 97.6 0.00035 1.2E-08 76.3 13.8 159 616-777 6-217 (322)
430 2pyw_A Uncharacterized protein 97.6 0.00019 6.5E-09 81.8 11.4 77 746-826 231-312 (420)
431 1zyl_A Hypothetical protein YI 97.4 0.0021 7.3E-08 70.2 15.3 157 617-777 11-223 (328)
432 3dxq_A Choline/ethanolamine ki 97.4 0.001 3.5E-08 71.9 12.5 138 632-778 23-203 (301)
433 3e4g_A ATP synthase subunit S, 97.3 5.9E-05 2E-09 73.9 2.2 81 289-370 63-149 (176)
434 3e4g_A ATP synthase subunit S, 97.3 3.3E-05 1.1E-09 75.8 -0.2 83 65-147 62-149 (176)
435 3csv_A Aminoglycoside phosphot 97.3 0.00074 2.5E-08 74.1 10.5 141 633-778 24-218 (333)
436 1nw1_A Choline kinase (49.2 KD 97.2 0.00082 2.8E-08 76.5 10.1 73 632-710 78-159 (429)
437 3feg_A Choline/ethanolamine ki 97.0 0.0027 9.3E-08 70.7 11.3 140 633-777 56-254 (379)
438 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00013 4.5E-09 72.9 0.2 18 260-277 66-83 (197)
439 3c5i_A Choline kinase; choline 97.0 0.0019 6.6E-08 71.9 9.8 73 633-710 39-121 (369)
440 2qg7_A Ethanolamine kinase PV0 96.9 0.0046 1.6E-07 70.7 12.3 74 632-710 113-188 (458)
441 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00021 7.3E-09 71.3 0.4 116 258-373 35-170 (197)
442 3i1a_A Spectinomycin phosphotr 96.7 0.0066 2.3E-07 66.7 11.2 66 638-710 34-108 (339)
443 3f2s_A CK, chetk-alpha, cholin 96.2 0.025 8.4E-07 63.2 12.3 141 633-777 58-280 (401)
444 3rfe_A Platelet glycoprotein I 96.2 0.006 2E-07 56.7 6.1 36 265-300 32-68 (130)
445 2yle_A Protein spire homolog 1 95.8 0.078 2.7E-06 53.1 12.4 103 708-829 33-135 (229)
446 3mes_A Choline kinase; malaria 95.2 0.11 3.7E-06 58.6 12.4 139 633-777 76-291 (424)
447 3cxl_A N-chimerin; SH2, RHO-GA 95.2 0.00057 1.9E-08 78.5 -6.6 60 464-524 13-92 (463)
448 2l2t_A Receptor tyrosine-prote 93.5 0.049 1.7E-06 39.2 2.9 32 553-584 8-39 (44)
449 2k1k_A Ephrin type-A receptor 93.4 0.05 1.7E-06 38.0 2.8 33 549-581 5-37 (38)
450 2ks1_B Epidermal growth factor 92.7 0.11 3.8E-06 37.5 3.8 30 554-583 10-39 (44)
451 3g15_A CK, chetk-alpha, cholin 91.5 1.1 3.7E-05 50.1 12.3 29 749-777 246-280 (401)
452 2jwa_A Receptor tyrosine-prote 87.1 0.42 1.4E-05 34.3 2.8 9 555-563 12-20 (44)
453 4d8k_A Tyrosine-protein kinase 80.1 0.09 3.1E-06 51.4 -4.3 71 453-524 30-118 (175)
454 4ann_A ESSB; membrane protein, 79.2 5.3 0.00018 39.9 8.2 115 681-831 43-158 (215)
455 4ano_A ESSB; membrane protein, 73.2 6.7 0.00023 39.3 7.1 115 681-831 48-163 (219)
456 2k9y_A Ephrin type-A receptor 71.5 2.4 8.1E-05 30.1 2.5 15 555-569 13-27 (41)
457 2klu_A T-cell surface glycopro 69.0 2.9 0.0001 32.4 2.5 18 560-577 12-29 (70)
458 2l34_A TYRO protein tyrosine k 47.3 12 0.00041 25.1 2.3 26 553-578 5-30 (33)
459 1cja_A Protein (actin-fragmin 41.3 55 0.0019 34.8 7.6 79 697-777 156-237 (342)
460 2lz0_A Uncharacterized protein 38.6 32 0.0011 29.5 4.5 46 227-273 7-52 (100)
461 3ls8_A Phosphatidylinositol 3- 34.0 2.6E+02 0.009 32.3 12.4 83 686-776 402-501 (614)
462 3hhm_A Phosphatidylinositol-4, 32.3 2.3E+02 0.0078 35.2 12.0 59 710-776 900-961 (1091)
463 2x6h_A GH13170P, VPS34, phosph 30.4 3.4E+02 0.011 32.0 12.7 82 687-776 477-575 (696)
464 2cr4_A 3BP-2, SH3 domain-bindi 29.2 5.4 0.00018 36.2 -2.2 42 482-524 15-64 (126)
465 2dly_A FYN-related kinase; BRK 28.0 14 0.00046 33.2 0.2 42 483-524 2-60 (121)
466 3cqt_A P59-FYN, proto-oncogene 25.6 4 0.00014 33.6 -3.5 49 453-501 23-72 (79)
467 2lz0_A Uncharacterized protein 24.1 1.3E+02 0.0043 25.7 5.8 44 75-120 7-50 (100)
468 4ag1_C Fynomer; hydrolase-de n 21.7 5.3 0.00018 33.3 -3.6 50 453-502 24-74 (84)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=7.7e-53 Score=466.40 Aligned_cols=260 Identities=26% Similarity=0.438 Sum_probs=207.8
Q ss_pred cCCCccceeecCCcEEEEEEEec------CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS------DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
++|...++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45667789999999999999864 478999999987766667789999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCC-------------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcE
Q 002121 701 VYEFMANGTLRESLSGRS-------------GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTA 767 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~ 767 (964)
|||||++|+|.++++... ..+++|.+++.|+.|||+||+|||+.+ ||||||||+||||++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence 999999999999997642 236999999999999999999999987 9999999999999999999
Q ss_pred EEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhcc
Q 002121 768 KVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNR 846 (964)
Q Consensus 768 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 846 (964)
||+|||+|+...........+...||+.|||||++.+..++.++|||||||++|||+| |+.||..... .+.+......
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-~~~~~~i~~g 276 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-TEAIDCITQG 276 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH-HHHHHHHHHT
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcC
Confidence 9999999997755444444556789999999999999999999999999999999999 8999975432 2222222211
Q ss_pred CcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 847 DDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 847 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
... ..++. ....+.+++.+||+.||++||||+||++.|+.+.+.
T Consensus 277 ~~~---~~p~~-----------~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 277 REL---ERPRA-----------CPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CCC---CCCTT-----------CCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCC---CCccc-----------ccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 110 01111 124567899999999999999999999999998764
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.2e-53 Score=463.00 Aligned_cols=261 Identities=28% Similarity=0.444 Sum_probs=214.9
Q ss_pred cCCCccceeecCCcEEEEEEEec------CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS------DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
++|...+.||+|+||+||+|++. +|+.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46778899999999999999864 478899999987766667789999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCC-----------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEE
Q 002121 701 VYEFMANGTLRESLSGRS-----------GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKV 769 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl 769 (964)
|||||++|+|.++|+..+ ...++|.+++.|+.|||+||+|||+++ ||||||||+||||++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence 999999999999997532 346999999999999999999999988 999999999999999999999
Q ss_pred eecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCc
Q 002121 770 ADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDD 848 (964)
Q Consensus 770 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 848 (964)
+|||+|+...............||+.|||||++.++.|+.++|||||||++|||+| |+.||.... ..+.+........
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~-~~~~~~~i~~~~~ 248 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-NNEVIECITQGRV 248 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-HHHHHHHHHHTCC
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCC
Confidence 99999987654433333344579999999999999999999999999999999999 899996533 2222222221111
Q ss_pred ccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 849 EEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 849 ~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
. ..++ . ....+.+++.+||+.||++||||+||++.|+.+.+..
T Consensus 249 ~---~~p~----~-------~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 249 L---QRPR----T-------CPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp C---CCCT----T-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred C---CCCc----c-------chHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 0 0111 1 1245678999999999999999999999999987644
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=8.9e-53 Score=461.48 Aligned_cols=256 Identities=24% Similarity=0.375 Sum_probs=209.5
Q ss_pred CCCccceeecCCcEEEEEEEec------CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEE
Q 002121 628 NFSESNEIGSGGYGKVYRGMLS------DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 628 ~~~~~~~lG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
+++..++||+|+||+||+|++. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 4556789999999999999863 467899999975433 335689999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCC--------------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc
Q 002121 701 VYEFMANGTLRESLSGRS--------------GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT 766 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~ 766 (964)
|||||++|+|.++|+.+. ...++|.+++.|+.|||+||+|||+.+ ||||||||+||||++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence 999999999999996542 235899999999999999999999988 999999999999999999
Q ss_pred EEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhc
Q 002121 767 AKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMN 845 (964)
Q Consensus 767 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 845 (964)
+||+|||+|+.....+.....+...||+.|||||++.++.|+.++|||||||++|||+| |+.||.... ..+.+.. +.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~-~~~~~~~-i~ 261 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-NQDVVEM-IR 261 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC-HHHHHHH-HH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC-HHHHHHH-HH
Confidence 99999999997755444344456789999999999999999999999999999999999 899996433 2222222 22
Q ss_pred cCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 002121 846 RDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETL 901 (964)
Q Consensus 846 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 901 (964)
.... . ..+. .....+.+++.+||+.||++||||+||++.|+.+
T Consensus 262 ~~~~-----~-----~~p~---~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 262 NRQV-----L-----PCPD---DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp TTCC-----C-----CCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred cCCC-----C-----CCcc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 2110 0 0111 1224567899999999999999999999998853
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-52 Score=455.58 Aligned_cols=260 Identities=28% Similarity=0.454 Sum_probs=204.1
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
.++|...++||+|+||+||+|++++ .||||+++.... ...++|.+|+++|++++|||||+++|+|.+ +..+||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4577888999999999999999753 699999875433 334679999999999999999999999864 57899999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 783 (964)
||++|+|.++++... ..++|.+++.|+.|||+||+|||+.+ ||||||||+||||++++.+||+|||+|+.......
T Consensus 112 y~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 112 WCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred cCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 999999999997653 46999999999999999999999987 99999999999999999999999999987654443
Q ss_pred CceeecccccCcccCcccccc---CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 784 GHVSTQVKGTMGYLDPEYYMT---QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
.......+||+.|||||++.. +.|+.++|||||||++|||+||+.||....... .+...+.... ..|
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~---------~~p 257 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGY---------ASP 257 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTC---------CCC
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCC---------CCC
Confidence 344556789999999999863 468999999999999999999999997543322 2222222211 111
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLL 902 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 902 (964)
.+..........+.+++.+||+.||++||||.||++.|+.+.
T Consensus 258 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp CSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred CcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 111111122245678999999999999999999999998764
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.5e-51 Score=450.86 Aligned_cols=250 Identities=24% Similarity=0.404 Sum_probs=204.4
Q ss_pred cCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
++|.+.+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 6899999999999999999996 4799999999976533 334579999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 783 (964)
||++|+|.+++...++..+++.++..|+.||+.||+|||+++ ||||||||+||||++++.+||+|||+|+......
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence 999999999998666667899999999999999999999988 9999999999999999999999999998764321
Q ss_pred CceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccch
Q 002121 784 GHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIR 863 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (964)
...+..+||+.|||||++.+..|+.++||||+||++|||+||+.||... ...+.+.......... . ...+
T Consensus 180 -~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~-~~~~~~~~i~~~~~~~---~----~~~~- 249 (350)
T 4b9d_A 180 -ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-SMKNLVLKIISGSFPP---V----SLHY- 249 (350)
T ss_dssp -HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHTCCCC---C----CTTS-
T ss_pred -ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHcCCCCC---C----CccC-
Confidence 2234567999999999999999999999999999999999999999653 3333333333322110 1 1111
Q ss_pred hhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 864 NTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 864 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
...+.+++.+||+.||++|||++|+++
T Consensus 250 ------s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 250 ------SYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ------CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 134668999999999999999999975
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2e-50 Score=446.23 Aligned_cols=249 Identities=22% Similarity=0.359 Sum_probs=208.8
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEec
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFM 705 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 705 (964)
..|+..++||+|+||+||+|+.. +|+.||||+++.......+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46888999999999999999964 79999999997665555667899999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCCc
Q 002121 706 ANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGH 785 (964)
Q Consensus 706 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 785 (964)
++|+|.+++... .+++.++..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+.+.... .
T Consensus 154 ~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~ 225 (346)
T 4fih_A 154 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--P 225 (346)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--C
T ss_pred CCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC--C
Confidence 999999999753 4999999999999999999999998 9999999999999999999999999999875432 2
Q ss_pred eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccchhh
Q 002121 786 VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNT 865 (964)
Q Consensus 786 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 865 (964)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.... ..+.+........ +.+..
T Consensus 226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-~~~~~~~i~~~~~-----------~~~~~- 292 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-PLKAMKMIRDNLP-----------PRLKN- 292 (346)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHSSC-----------CCCSC-
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-HHHHHHHHHcCCC-----------CCCCc-
Confidence 2345789999999999999999999999999999999999999996543 2333332222111 00000
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 866 VLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 866 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.......+.+++.+||+.||++|||++|+++
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0011144668999999999999999999875
No 7
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-50 Score=444.36 Aligned_cols=267 Identities=26% Similarity=0.387 Sum_probs=204.6
Q ss_pred cCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeC----ceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQG----EQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~lV~ 702 (964)
++|...++||+|+||+||+|++ +|+.||||+++.... ....++.|+..+.+++|||||+++|+|.+++ ..+|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3567788999999999999998 589999999865322 1223345666677899999999999998765 479999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcC-----CCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELA-----NPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
|||++|+|.++++.. .++|.++.+++.|+|+||+|||+++ .++||||||||+||||++++++||+|||+|+.
T Consensus 81 Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 999999999999864 4999999999999999999999862 34699999999999999999999999999998
Q ss_pred ecCCCCC--ceeecccccCcccCccccccC------CCCCchhHHHHHHHHHHHHhCCCCCCCCc-------------hh
Q 002121 778 VSDSSKG--HVSTQVKGTMGYLDPEYYMTQ------QLTEKSDVYSFGVVMLELITAKQPIEKGK-------------YV 836 (964)
Q Consensus 778 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~S~Gvvl~elltg~~p~~~~~-------------~~ 836 (964)
....... ......+||+.|||||++.+. .++.++|||||||++|||+||++|+.... ..
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 7654321 122345799999999998754 46789999999999999999987764211 11
Q ss_pred HHHHHHHhccCcccccccccccCccchhh--hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCCC
Q 002121 837 VREVRTAMNRDDEEHYGLTEMMDPTIRNT--VLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDGM 907 (964)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 907 (964)
.+.+..... .+.++|.++.. .......+.+++.+||+.||++||||.||++.|+++.++++.
T Consensus 238 ~~~~~~~~~---------~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~i 301 (303)
T 3hmm_A 238 VEEMRKVVC---------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301 (303)
T ss_dssp HHHHHHHHT---------TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHh---------cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcCC
Confidence 222222221 12233333322 234456788999999999999999999999999999877654
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.3e-50 Score=450.15 Aligned_cols=272 Identities=24% Similarity=0.412 Sum_probs=221.2
Q ss_pred ccHHHHHHhhcCCCccceeecCCcEEEEEEEecC------CcEEEEEEecCCCcc-hhHHHHHHHHHHHhcCC-CCccce
Q 002121 617 FSYDELKKCSNNFSESNEIGSGGYGKVYRGMLSD------GQVVAIKRAQQGSMQ-GGLEFKTEIELLSRVHH-KNLVGL 688 (964)
Q Consensus 617 ~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~------g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H-~nIv~l 688 (964)
+..++++...++|+..+.||+|+||+||+|++.. ++.||||+++..... ..++|.+|+++|++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3456677778899999999999999999998642 368999999865443 34579999999999965 899999
Q ss_pred eEEEEee-CceEEEEEeccCCChhhhhcCCC--------------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccC
Q 002121 689 VGFCFEQ-GEQMLVYEFMANGTLRESLSGRS--------------GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRD 753 (964)
Q Consensus 689 ~~~~~~~-~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 753 (964)
+|+|.+. +..++|||||++|+|.++|+... ...++|.+++.++.|||+||+|||+++ |||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCc
Confidence 9999765 56899999999999999997532 235899999999999999999999988 99999
Q ss_pred CCCCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCC
Q 002121 754 VKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEK 832 (964)
Q Consensus 754 lk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~ 832 (964)
|||+|||+++++.+||+|||+|+.+.............||+.|||||++.++.|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998765544445556789999999999999999999999999999999998 8999965
Q ss_pred CchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 833 GKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
..... .+...+..... ...++. ...++.+++.+||+.||++||||.||++.|+.+++..
T Consensus 291 ~~~~~-~~~~~i~~g~~--~~~p~~-----------~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 291 VKIDE-EFCRRLKEGTR--MRAPDY-----------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp CCCSH-HHHHHHHHTCC--CCCCTT-----------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred CCHHH-HHHHHHHcCCC--CCCCcc-----------CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 33222 22222222110 001111 1245678999999999999999999999999998754
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.9e-50 Score=432.61 Aligned_cols=246 Identities=27% Similarity=0.433 Sum_probs=198.8
Q ss_pred CccceeecCCcEEEEEEEec-CCcEEEEEEecCCC--cchhHHHHHHHHHHHhcCCCCccceeEEEEe----eCceEEEE
Q 002121 630 SESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS--MQGGLEFKTEIELLSRVHHKNLVGLVGFCFE----QGEQMLVY 702 (964)
Q Consensus 630 ~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lV~ 702 (964)
...++||+|+||+||+|+.. +++.||||++.... ....+.|.+|+++|++++|||||++++++.+ ++..||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999964 68999999987543 2334579999999999999999999999976 34579999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC-CCcEEEeecccceeecCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE-NLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-~~~~kl~DFGla~~~~~~ 781 (964)
|||++|+|.++++... .+++..+..++.||+.||+|||+++ ++||||||||+||||+. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence 9999999999997643 6899999999999999999999875 56999999999999984 79999999999986432
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
......+||+.|||||++. +.|+.++|||||||++|||+||+.||.................. .+.
T Consensus 185 ---~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~----------~~~ 250 (290)
T 3fpq_A 185 ---SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----------PAS 250 (290)
T ss_dssp ---TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----------CGG
T ss_pred ---CccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC----------CCC
Confidence 2234568999999999886 46999999999999999999999999765444443333322211 011
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
+.... ...+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~---~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 FDKVA---IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGGCC---CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCccC---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11111 134668999999999999999999875
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.2e-50 Score=442.42 Aligned_cols=258 Identities=21% Similarity=0.271 Sum_probs=207.3
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEe
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
.+.|...++||+|+||+||+|+. .+|+.||||+++.... ..+|+++|++++|||||++++++.+++..||||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 34677788999999999999996 4699999999975432 24799999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC-cEEEeecccceeecCCCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL-TAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-~~kl~DFGla~~~~~~~~ 783 (964)
|++|+|.++++..+ .+++.++..++.||+.||+|||+++ ||||||||+||||+.++ ++||+|||+|+.+.....
T Consensus 132 ~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 99999999997653 6999999999999999999999988 99999999999999988 699999999998754322
Q ss_pred Cc---eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 784 GH---VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 784 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
.. .....+||+.|||||++.+..|+.++|||||||++|||+||+.||...... +.+......... .. .+.+
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~-~~~~~i~~~~~~----~~-~~~~ 280 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG-PLCLKIASEPPP----IR-EIPP 280 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS-CCHHHHHHSCCG----GG-GSCT
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHHHcCCCC----ch-hcCc
Confidence 11 223457999999999999999999999999999999999999999642211 111111111110 00 0111
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCC
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDG 906 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 906 (964)
.+ ...+.+++.+||+.||++|||+.|+++.|...++..+
T Consensus 281 ~~-------s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 281 SC-------APLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp TS-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred cC-------CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 11 2456689999999999999999999999999887654
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.5e-50 Score=438.87 Aligned_cols=249 Identities=22% Similarity=0.310 Sum_probs=209.9
Q ss_pred cCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
++|++.+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4699999999999999999995 479999999987432 223457899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
|||++|+|.+++...+ .+++.++..++.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999997643 6999999999999999999999998 9999999999999999999999999999876544
Q ss_pred CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTI 862 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (964)
........+||+.|||||++.+..|+.++||||+||++|||+||+.||... +..+.+......... ..+.+.
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-~~~~~~~~i~~~~~~----~p~~~s--- 258 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEGLIFAKIIKLEYD----FPEKFF--- 258 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCC----CCTTCC---
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCC----CCcccC---
Confidence 444455678999999999999999999999999999999999999999643 333333333322211 221111
Q ss_pred hhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 863 RNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 863 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..+.+++.+||+.||++|||++|+..
T Consensus 259 --------~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 259 --------PKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp --------HHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred --------HHHHHHHHHHccCCHhHCcChHHHcC
Confidence 34568999999999999999999753
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.8e-49 Score=447.70 Aligned_cols=249 Identities=21% Similarity=0.348 Sum_probs=209.5
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEec
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFM 705 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 705 (964)
+.|+..++||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56899999999999999999964 69999999998766666678999999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCCc
Q 002121 706 ANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGH 785 (964)
Q Consensus 706 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 785 (964)
++|+|.+++... .+++.++..++.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+|+.+.... .
T Consensus 231 ~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~ 302 (423)
T 4fie_A 231 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--P 302 (423)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--C
T ss_pred CCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC--c
Confidence 999999999754 4899999999999999999999998 9999999999999999999999999999875432 2
Q ss_pred eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccchhh
Q 002121 786 VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNT 865 (964)
Q Consensus 786 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 865 (964)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||.... ..+.+..+...... .+..
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-~~~~~~~i~~~~~~-----------~~~~- 369 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-PLKAMKMIRDNLPP-----------RLKN- 369 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHSCCC-----------CCSC-
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-HHHHHHHHHcCCCC-----------CCcc-
Confidence 2345789999999999999999999999999999999999999996543 23333322222110 0000
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 866 VLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 866 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.......+.+++.+||+.||++|||+.|+++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0001134668999999999999999999875
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8e-49 Score=421.35 Aligned_cols=245 Identities=24% Similarity=0.385 Sum_probs=191.6
Q ss_pred cCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCc---chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSM---QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
++|++.+.||+|+||+||+|+. .+|+.||||+++.... .....+.+|+++|++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5899999999999999999995 4799999999875432 23457899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||| +|+|.+++..++ .+++.++..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 999 689999987654 6999999999999999999999988 9999999999999999999999999998765432
Q ss_pred CCceeecccccCcccCccccccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
.....+||+.|||||++.+..+ +.++||||+||++|||+||+.||... ............... ..+.++
T Consensus 167 ---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-~~~~~~~~i~~~~~~----~p~~~s-- 236 (275)
T 3hyh_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-SIPVLFKNISNGVYT----LPKFLS-- 236 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCC----CCTTSC--
T ss_pred ---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHcCCCC----CCCCCC--
Confidence 2345679999999999998776 58999999999999999999999643 333333333222211 222121
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..+.+++.+||+.||++|||++|+++
T Consensus 237 ---------~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 237 ---------PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---------HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---------HHHHHHHHHHccCChhHCcCHHHHHc
Confidence 34568999999999999999999986
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.5e-49 Score=427.83 Aligned_cols=242 Identities=26% Similarity=0.356 Sum_probs=194.4
Q ss_pred cCCCccceeecCCcEEEEEEEec----CCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS----DGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
++|++.+.||+|+||+||+|+.. .++.||||+++.... ....++.+|+++|++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46899999999999999999852 478999999875432 233468899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
|||||++|+|.+++...+ .+++.++..++.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999997643 6999999999999999999999998 99999999999999999999999999986543
Q ss_pred CCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 781 SSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 781 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||... +..+.+......... ..+.++
T Consensus 179 ~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~-~~~~~~~~i~~~~~~----~p~~~s- 250 (304)
T 3ubd_A 179 HE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK-DRKETMTMILKAKLG----MPQFLS- 250 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCC----CCTTSC-
T ss_pred CC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc-CHHHHHHHHHcCCCC----CCCcCC-
Confidence 32 2234567999999999999999999999999999999999999999643 333333333322211 111121
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTM 891 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 891 (964)
..+.+++.+||+.||++|||+
T Consensus 251 ----------~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 251 ----------PEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp ----------HHHHHHHHHHTCSSGGGSTTC
T ss_pred ----------HHHHHHHHHHcccCHHHCCCC
Confidence 345689999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.3e-47 Score=419.42 Aligned_cols=250 Identities=23% Similarity=0.391 Sum_probs=189.8
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc-hhHHHHHHHHHHHhcCCCCccceeEEEEeeCc-------
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ-GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE------- 697 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------- 697 (964)
++|+..+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+++|++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46888999999999999999964 7999999998754433 34578999999999999999999999986553
Q ss_pred -----eEEEEEeccCCChhhhhcCCCC-CccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEee
Q 002121 698 -----QMLVYEFMANGTLRESLSGRSG-IHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVAD 771 (964)
Q Consensus 698 -----~~lV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 771 (964)
.|+|||||++|+|.+++..... ...++..++.++.||++||+|||+++ ||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence 6899999999999999987642 23566778899999999999999988 99999999999999999999999
Q ss_pred cccceeecCCCCC----------ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHH
Q 002121 772 FGLSKLVSDSSKG----------HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVR 841 (964)
Q Consensus 772 FGla~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~ 841 (964)
||+|+........ ...+..+||+.|||||++.+..|+.++|||||||++|||++ ||.........+.
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~ 238 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence 9999876543211 11234579999999999999999999999999999999997 7754322222222
Q ss_pred HHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 842 TAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 842 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
...... ..+ ..........+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~----------~p~----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 239 DVRNLK----------FPP----LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHTTC----------CCH----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhcCC----------CCC----CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 211110 111 11122234567999999999999999999875
No 16
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.7e-45 Score=407.86 Aligned_cols=212 Identities=22% Similarity=0.382 Sum_probs=178.4
Q ss_pred HHHHHhhcCCCccceeecCCcEEEEEEEec----CCcEEEEEEecCCCcchhHHHHHHHHHHHhc-CCCCccceeEEEEe
Q 002121 620 DELKKCSNNFSESNEIGSGGYGKVYRGMLS----DGQVVAIKRAQQGSMQGGLEFKTEIELLSRV-HHKNLVGLVGFCFE 694 (964)
Q Consensus 620 ~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~ 694 (964)
+++....+.|++.+.||+|+||+||+|+.+ .++.||||++.... ...++.+|+++|+++ +|||||++++++.+
T Consensus 14 ~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 14 EAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp HHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred HhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 344456788999999999999999999853 46899999987543 235688999999998 69999999999999
Q ss_pred eCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCC-CcEEEeecc
Q 002121 695 QGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDEN-LTAKVADFG 773 (964)
Q Consensus 695 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-~~~kl~DFG 773 (964)
.+..|+|||||++|+|.+++. .+++.++..++.|++.||+|||+++ ||||||||+|||++.+ +.+||+|||
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCT
T ss_pred CCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 999999999999999999984 3889999999999999999999998 9999999999999876 799999999
Q ss_pred cceeecCCCC--------------------------CceeecccccCcccCccccccC-CCCCchhHHHHHHHHHHHHhC
Q 002121 774 LSKLVSDSSK--------------------------GHVSTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVVMLELITA 826 (964)
Q Consensus 774 la~~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~elltg 826 (964)
+|+...+... ....+..+||+.|||||++.+. .|+.++||||+||++|||+||
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 9986543211 0112345799999999999775 589999999999999999999
Q ss_pred CCCCCCCchhHHHHH
Q 002121 827 KQPIEKGKYVVREVR 841 (964)
Q Consensus 827 ~~p~~~~~~~~~~~~ 841 (964)
+.||..+.+..+.+.
T Consensus 244 ~~Pf~~~~~~~~~l~ 258 (361)
T 4f9c_A 244 RYPFYKASDDLTALA 258 (361)
T ss_dssp CSSSSCCSSHHHHHH
T ss_pred CCCCCCCCCHHHHHH
Confidence 999986665544443
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.8e-45 Score=413.01 Aligned_cols=263 Identities=22% Similarity=0.328 Sum_probs=201.4
Q ss_pred cCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEe------eCc
Q 002121 627 NNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFE------QGE 697 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~~~ 697 (964)
++|.+.+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5799999999999999999996 4799999999975433 234568899999999999999999999864 357
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
.|||||||+ |+|.+++...+ .+++.++..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999996 68999997653 6999999999999999999999998 99999999999999999999999999987
Q ss_pred ecCCC--CCceeecccccCcccCccccccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccc
Q 002121 778 VSDSS--KGHVSTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGL 854 (964)
Q Consensus 778 ~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (964)
+.... ........+||+.|||||++.+. .++.++||||+||++|||++|++||.... ..+.+..++..........
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~-~~~~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN-YVHQLQLIMMVLGTPSPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS-HHHHHHHHHHHHCCCCGGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC-HHHHHHHHHHhcCCCChHH
Confidence 64322 12234457899999999998764 56999999999999999999999996433 3333332221111000000
Q ss_pred ccc------------cCc----cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 855 TEM------------MDP----TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 855 ~~~------------~d~----~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
... +.+ .+..........+.+++.+||..||++|||++|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000 000 000001111245678999999999999999999875
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.5e-44 Score=399.27 Aligned_cols=282 Identities=44% Similarity=0.758 Sum_probs=234.7
Q ss_pred cccHHHHHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEee
Q 002121 616 WFSYDELKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ 695 (964)
Q Consensus 616 ~~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 695 (964)
.+++.++..++++|+..+.||+|+||+||+|+.++|+.||||++........+.+.+|++++++++||||+++++++.+.
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 45566777889999999999999999999999888999999998876666667899999999999999999999999999
Q ss_pred CceEEEEEeccCCChhhhhcCCC--CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecc
Q 002121 696 GEQMLVYEFMANGTLRESLSGRS--GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFG 773 (964)
Q Consensus 696 ~~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFG 773 (964)
+..++||||+++|+|.+++.... ...++|.+++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecc
Confidence 99999999999999999997654 235899999999999999999999988 9999999999999999999999999
Q ss_pred cceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc-----hhHHHHHHHhccCc
Q 002121 774 LSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGK-----YVVREVRTAMNRDD 848 (964)
Q Consensus 774 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~-----~~~~~~~~~~~~~~ 848 (964)
+++...............||+.|+|||++.++.++.++|||||||++|||++|+.||.... ....+.........
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 9987654333333445569999999999999999999999999999999999999986321 22333332222221
Q ss_pred ccccccccccCccchhh-hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 849 EEHYGLTEMMDPTIRNT-VLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 849 ~~~~~~~~~~d~~l~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
+.+.+++.+... .......+.+++.+||+.||++|||+.|+++.|+.+++..
T Consensus 265 -----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 265 -----LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp -----CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred -----HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 334444444332 3455677889999999999999999999999999988644
No 19
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.9e-45 Score=425.01 Aligned_cols=398 Identities=23% Similarity=0.363 Sum_probs=275.4
Q ss_pred CCCCCCCchhHhhHHHHHHHHhCcccc-eEEeecccccCCcceeEEEeec-----------------CCCcceeecccee
Q 002121 453 SFRELSNVTVFHSLEMSLWVKLGLTPG-SVFLQNPFFNIDDYLQIQVALF-----------------PSGEKSFNRSEVQ 514 (964)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 514 (964)
+|++++-+++... +.+||.......+ .+|+|++|+.+.+.++.+.|++ +.|+|++|.|+..
T Consensus 26 ~~~~gd~~~v~~~-~~~W~~~~~~~~g~~G~~P~~yv~~~~~le~~~W~~g~i~r~~ae~~L~~~~~~~G~FLvR~s~~~ 104 (454)
T 1qcf_A 26 SFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETT 104 (454)
T ss_dssp CBCTTCEEEEEEC-CTTEEEEEETTTCCEEEEEGGGEEETTCGGGSTTEETTCCHHHHHHHHHSTTCCTTCEEEEECSSS
T ss_pred cccCCCEEEEEec-CCCCeEEEECCCCceEEecchhcccccccccccccccccchhhhhhhhhcCCCCCceEEEEECcCC
Confidence 4677777777766 4679988765444 6899999999988888889987 4589999999988
Q ss_pred eeeeEeecceeCCCcccCC-cccccCCcccccCCCCCCCCcceeehhHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCC
Q 002121 515 KIGFELSNQTYKPPKEFGP-YYFIASPYAFQVPQGGNSISPGVAAGIACGGAVLVLGLVGLGLYAIRQKKRAERAIGLSK 593 (964)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~~~~~~~ 593 (964)
...+.++.....+...... .|.+.. ...++--......... + .-+.-.+. +....-......
T Consensus 105 ~g~y~lsv~~~~~~~~~~v~H~~I~~-----~~~g~~~i~~~~~F~s-l---------~eLv~~y~--~~~~~l~~~~~~ 167 (454)
T 1qcf_A 105 KGSYSLSVRDYDPRQGDTVKHYKIRT-----LDNGGFYISPRSTFST-L---------QELVDHYK--KGNDGLCQKLSV 167 (454)
T ss_dssp TTSEEEEEEEEETTTEEEEEEEEEEE-----CTTSCEESSSSSCBSS-H---------HHHHHHHT--SSCTTSSSCCCS
T ss_pred CCeEEEEEEecccCCCCceEEEEEEE-----cCCCcEEEeCccccCC-H---------HHHHHHHH--hccCCccccccc
Confidence 8888877665321110000 111100 0000000000000000 0 00001111 000000000000
Q ss_pred CCCcCCCCCCCCCCCCCCCCcccccHHHHHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHH
Q 002121 594 PFASWAPSGKDSGGAPQLKGARWFSYDELKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTE 673 (964)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E 673 (964)
+.... .+ ...+..++++...++|...+.||+|+||+||+|.++++..||||+++... ...++|.+|
T Consensus 168 ~~~~~---------~~----~~~~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E 233 (454)
T 1qcf_A 168 PCMSS---------KP----QKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAE 233 (454)
T ss_dssp BCCCC---------CC----CCCCCTTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHH
T ss_pred ccccc---------Cc----cccccccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHH
Confidence 00000 00 01122233445567888999999999999999999888999999998654 345689999
Q ss_pred HHHHHhcCCCCccceeEEEEeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccC
Q 002121 674 IELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRD 753 (964)
Q Consensus 674 ~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 753 (964)
+++|++++|||||++++++. .+..++|||||++|+|.++++...+..+++.+++.++.||+.||+|||+.+ |+|||
T Consensus 234 ~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrD 309 (454)
T 1qcf_A 234 ANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRD 309 (454)
T ss_dssp HHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSS
T ss_pred HHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCC
Confidence 99999999999999999986 667899999999999999998654446889999999999999999999988 99999
Q ss_pred CCCCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCC
Q 002121 754 VKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEK 832 (964)
Q Consensus 754 lk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~ 832 (964)
|||+|||++.++.+||+|||+++....... .......+|+.|+|||++..+.++.++|||||||++|||+| |+.||..
T Consensus 310 lkp~Nill~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~ 388 (454)
T 1qcf_A 310 LRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388 (454)
T ss_dssp CSGGGEEECTTCCEEECSTTGGGGBCCHHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCHHHEEECCCCcEEEeeCCCceEcCCCce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999987543211 11223446789999999998999999999999999999999 9999964
Q ss_pred CchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 002121 833 GKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLL 902 (964)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 902 (964)
... .+.... +..... .. ... .....+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus 389 ~~~-~~~~~~-i~~~~~----~~--~~~-------~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 389 MSN-PEVIRA-LERGYR----MP--RPE-------NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CCH-HHHHHH-HHHTCC----CC--CCT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCH-HHHHHH-HHcCCC----CC--CCC-------CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 322 222222 111110 00 000 11245678999999999999999999999998765
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.4e-43 Score=421.89 Aligned_cols=252 Identities=21% Similarity=0.319 Sum_probs=210.2
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEe
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
.++|.+.+.||+|+||+||+|+. .+|+.||+|++........+.+.+|+++|++++|||||++++++.+.+..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 46899999999999999999996 47999999999876666667899999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCC--CcEEEeecccceeecCCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDEN--LTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~--~~~kl~DFGla~~~~~~~ 782 (964)
|++|+|.+++.... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 236 ~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~- 310 (573)
T 3uto_A 236 MSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK- 310 (573)
T ss_dssp CCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT-
T ss_pred cCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCC-
Confidence 99999999997543 36999999999999999999999998 9999999999999854 89999999999987543
Q ss_pred CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTI 862 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (964)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||.... ..+.+......... ++...
T Consensus 311 --~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~-~~~~~~~i~~~~~~--------~~~~~ 379 (573)
T 3uto_A 311 --QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN-DDETLRNVKSCDWN--------MDDSA 379 (573)
T ss_dssp --SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-HHHHHHHHHTTCCC--------CCSGG
T ss_pred --CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-HHHHHHHHHhCCCC--------CCccc
Confidence 23345679999999999999999999999999999999999999996433 33333333322211 11111
Q ss_pred hhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 863 RNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 863 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.... ...+.+++.+||+.||++|||+.|+++
T Consensus 380 ~~~~---s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 380 FSGI---SEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GTTS---CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCC---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1111 134568999999999999999999876
No 21
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.1e-44 Score=422.45 Aligned_cols=392 Identities=26% Similarity=0.421 Sum_probs=272.2
Q ss_pred CCCCCCCchhHhhHHHHHHHHhCccc-ceEEeecccccCCcceeEEEeec-----------------CCCcceeecccee
Q 002121 453 SFRELSNVTVFHSLEMSLWVKLGLTP-GSVFLQNPFFNIDDYLQIQVALF-----------------PSGEKSFNRSEVQ 514 (964)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 514 (964)
+|++++-+.+....+.+||....... ..+|+|++|+.+.+.++.+.|++ +.|+|++|.|+..
T Consensus 20 ~~~~gd~~~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~~le~~~w~~g~~~r~~ae~~L~~~~~~~G~FLvR~s~~~ 99 (452)
T 1fmk_A 20 SFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETT 99 (452)
T ss_dssp CBCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETTSGGGSTTEEETCCHHHHHHHHTCTTSCTTEEEEEECSSS
T ss_pred CccCCCEEEEeccCCCCceEEEEcCCCcccccCcccccccccccccccccCCccHHHHHHHhccCCCCCceEEEEeCCCC
Confidence 47788888888777888998776643 46999999999999888888988 3599999999987
Q ss_pred eeeeEeecceeCCC-----------cccCCcccccCCcccccCCCCCCCCcceeehhHHHHHHHHHHHHHHHHHHhhhhh
Q 002121 515 KIGFELSNQTYKPP-----------KEFGPYYFIASPYAFQVPQGGNSISPGVAAGIACGGAVLVLGLVGLGLYAIRQKK 583 (964)
Q Consensus 515 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 583 (964)
...+.+|....... ......++......+. .+. -++-+. + +.
T Consensus 100 ~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~~~~~~~F~--------------Sl~-----------~Li~~y-~-~~ 152 (452)
T 1fmk_A 100 KGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFN--------------SLQ-----------QLVAYY-S-KH 152 (452)
T ss_dssp TTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEES--------------SHH-----------HHHHHH-T-TC
T ss_pred CCceEEEEEeeccCCCCcEEEEEEEEcCCCCEEEecCcccC--------------CHH-----------HHHHHh-h-hc
Confidence 77777776542110 0001111111110000 010 001111 1 10
Q ss_pred hhhhhcCCCCCCCcCCCCCCCCCCCCCCCCcccccHHHHHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCC
Q 002121 584 RAERAIGLSKPFASWAPSGKDSGGAPQLKGARWFSYDELKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGS 663 (964)
Q Consensus 584 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~ 663 (964)
. .+.........+.. .+. ...+..++++...++|...+.||+|+||.||+|.+.++..||||+++...
T Consensus 153 ~----~~l~~~l~~~~~~~-----~~~---~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~ 220 (452)
T 1fmk_A 153 A----DGLCHRLTTVCPTS-----KPQ---TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT 220 (452)
T ss_dssp C----TTSSSCCCEECCCC-----CCC---CSSSSTTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS
T ss_pred c----ccchhhcccccccc-----ccc---cCCCCccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC
Confidence 0 01100000000000 000 01112223344556788899999999999999999888889999998654
Q ss_pred cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhh
Q 002121 664 MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHE 743 (964)
Q Consensus 664 ~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~ 743 (964)
. ..++|.+|+++|++++||||+++++++.+ +..++||||+++|+|.+++....+..+++.+++.++.|++.||+|||+
T Consensus 221 ~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 298 (452)
T 1fmk_A 221 M-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298 (452)
T ss_dssp S-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3 34679999999999999999999999876 778999999999999999975433468999999999999999999999
Q ss_pred cCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHH
Q 002121 744 LANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLEL 823 (964)
Q Consensus 744 ~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el 823 (964)
.+ |+||||||+|||+++++.+||+|||+++....... .......+|+.|+|||++..+.++.++|||||||++|||
T Consensus 299 ~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el 374 (452)
T 1fmk_A 299 MN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374 (452)
T ss_dssp TT---CCCSCCSGGGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred CC---eeCCCCChhhEEECCCCCEEECCCccceecCCCce-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHH
Confidence 88 99999999999999999999999999987653321 222344578899999999999999999999999999999
Q ss_pred Hh-CCCCCCCCchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 002121 824 IT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLL 902 (964)
Q Consensus 824 lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 902 (964)
+| |+.||..... .+.... +..... . ...+. ....+.+++.+||+.||++|||++++++.|+.+.
T Consensus 375 ~t~g~~P~~~~~~-~~~~~~-i~~~~~----~--~~~~~-------~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 375 TTKGRVPYPGMVN-REVLDQ-VERGYR----M--PCPPE-------CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp HTTTCCSSTTCCH-HHHHHH-HHTTCC----C--CCCTT-------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred HhCCCCCCCCCCH-HHHHHH-HHcCCC----C--CCCCC-------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 99 8999864322 222222 211110 0 00111 1245678999999999999999999999999876
Q ss_pred Hh
Q 002121 903 QN 904 (964)
Q Consensus 903 ~~ 904 (964)
..
T Consensus 440 ~~ 441 (452)
T 1fmk_A 440 TS 441 (452)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.3e-43 Score=393.51 Aligned_cols=282 Identities=45% Similarity=0.783 Sum_probs=232.9
Q ss_pred CcccccHHHHHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcc-hhHHHHHHHHHHHhcCCCCccceeEE
Q 002121 613 GARWFSYDELKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQ-GGLEFKTEIELLSRVHHKNLVGLVGF 691 (964)
Q Consensus 613 ~~~~~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~ 691 (964)
....|+++++..+.++|+..+.||+|+||+||+|...+|+.||||++...... ....+.+|++++++++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 35678999999999999999999999999999999888999999998764432 23478999999999999999999999
Q ss_pred EEeeCceEEEEEeccCCChhhhhcCCC--CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEE
Q 002121 692 CFEQGEQMLVYEFMANGTLRESLSGRS--GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKV 769 (964)
Q Consensus 692 ~~~~~~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl 769 (964)
+.+.+..++||||+++|+|.+++.... ...++|..+..++.|++.||+|||+.+.++|+||||||+|||++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 999999999999999999999998654 345999999999999999999999983334999999999999999999999
Q ss_pred eecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCC-------CCchhHHHHHH
Q 002121 770 ADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIE-------KGKYVVREVRT 842 (964)
Q Consensus 770 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~-------~~~~~~~~~~~ 842 (964)
+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+ ......+++..
T Consensus 176 ~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 176 GDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp CCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred ccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 99999987654332 33445669999999999998899999999999999999999999995 12223344333
Q ss_pred HhccCcccccccccccCccchhh-hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q 002121 843 AMNRDDEEHYGLTEMMDPTIRNT-VLLGFRRYLELALQCVEESATDRPTMSEVVKAIET 900 (964)
Q Consensus 843 ~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 900 (964)
...... .....+..+... .......+.+++.+||+.||++|||+.||++.|+.
T Consensus 255 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 255 LLKEKK-----LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTSSCC-----STTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred Hhhchh-----hhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 322222 334444443322 45556788999999999999999999999999875
No 23
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.6e-44 Score=423.65 Aligned_cols=393 Identities=24% Similarity=0.318 Sum_probs=275.0
Q ss_pred CCCCCCCchhHhhH-HHHHHHHhCcccceEEeecccccCCcceeEEEeec---------------CCCcceeeccceeee
Q 002121 453 SFRELSNVTVFHSL-EMSLWVKLGLTPGSVFLQNPFFNIDDYLQIQVALF---------------PSGEKSFNRSEVQKI 516 (964)
Q Consensus 453 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 516 (964)
+|++++.++++... +.+||.... .-.++|+|++|+.+...+..+.|++ +.|+|++|.|+....
T Consensus 61 s~~~gd~~~v~~~~~~~~w~~~~~-~~~~G~~P~~yv~~~~~le~~~wyhg~i~r~~ae~ll~~~~~G~fLvR~s~~~~~ 139 (495)
T 1opk_A 61 SITKGEKLRVLGYNHNGEWCEAQT-KNGQGWVPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPG 139 (495)
T ss_dssp CBCTTCEEEEEEECTTSSEEEEEC-SSCEEEEEGGGEEESSSGGGSTTEEEECCHHHHHHHGGGCCTTEEEEEECSSSTT
T ss_pred CccCCCEEEEeecCCCCCceeeee-cCCcceeccccccccccccchhhhccCCCHHHHHHHhhCCCCceEEEEeCCCCCC
Confidence 47888888888755 667886653 3557999999999999999999988 579999999998777
Q ss_pred eeEeeccee------CCCcccCCcccccCCcccccCCCCCCCCcceeehhHHHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 002121 517 GFELSNQTY------KPPKEFGPYYFIASPYAFQVPQGGNSISPGVAAGIACGGAVLVLGLVGLGLYAIRQKKRAERAIG 590 (964)
Q Consensus 517 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~~~~ 590 (964)
.+.+|.... +........++......+. .+. -+ +-... .. ..+
T Consensus 140 ~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~--------------sl~--------eL---v~~~~----~~--~~g 188 (495)
T 1opk_A 140 QRSISLRYEGRVYHYRINTASDGKLYVSSESRFN--------------TLA--------EL---VHHHS----TV--ADG 188 (495)
T ss_dssp CEEEEEEETTEEEEEECEECTTSCEESSTTSCBS--------------SHH--------HH---HHHHT----TC--CTT
T ss_pred ceEEEEeeCCeEEEEEEEecCCCceEeccCccch--------------hHH--------HH---hhhhc----cc--ccc
Confidence 777765541 1111011111111110000 000 00 00000 00 000
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCcccccHHHHHHhhcCCCccceeecCCcEEEEEEEecC-CcEEEEEEecCCCcchhHH
Q 002121 591 LSKPFASWAPSGKDSGGAPQLKGARWFSYDELKKCSNNFSESNEIGSGGYGKVYRGMLSD-GQVVAIKRAQQGSMQGGLE 669 (964)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~ 669 (964)
.........+.. ..+.... ....+++++....+|...+.||+|+||.||+|++.. ++.||||+++.... ..++
T Consensus 189 ~~~~l~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~ 262 (495)
T 1opk_A 189 LITTLHYPAPKR----NKPTIYG-VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEE 262 (495)
T ss_dssp SSSCCCEECCCC----SCCCCSS-SCSSSSCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHH
T ss_pred cchhcccccccc----ccccccc-cCccccccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHH
Confidence 000000000000 0000000 000122233345678889999999999999999764 88999999976443 3568
Q ss_pred HHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCe
Q 002121 670 FKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPI 749 (964)
Q Consensus 670 ~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 749 (964)
|.+|+++|++++|||||+++++|.+.+..++|||||++|+|.+++.......+++..++.++.||+.||+|||+.+ |
T Consensus 263 ~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---i 339 (495)
T 1opk_A 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 339 (495)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred HHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence 9999999999999999999999999999999999999999999998655567999999999999999999999988 9
Q ss_pred eccCCCCCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCC
Q 002121 750 IHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQ 828 (964)
Q Consensus 750 vH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~ 828 (964)
+||||||+|||++.++.+||+|||+++...... ........+|+.|+|||++..+.++.++|||||||++|||+| |+.
T Consensus 340 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~ 418 (495)
T 1opk_A 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS 418 (495)
T ss_dssp ECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccCCCChhhEEECCCCcEEEeecccceeccCCc-eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCC
Confidence 999999999999999999999999998764322 122233456789999999999999999999999999999999 899
Q ss_pred CCCCCchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 002121 829 PIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLL 902 (964)
Q Consensus 829 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 902 (964)
||...... + +...+..... .... ......+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 419 p~~~~~~~-~-~~~~~~~~~~----------~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 419 PYPGIDLS-Q-VYELLEKDYR----------MERP---EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp SSTTCCGG-G-HHHHHHTTCC----------CCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCCHH-H-HHHHHHcCCC----------CCCC---CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 98643211 1 1111111110 0000 011245678999999999999999999999998764
No 24
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.3e-43 Score=416.35 Aligned_cols=247 Identities=24% Similarity=0.330 Sum_probs=198.1
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc---chhHHH---HHHHHHHHhcCCCCccceeEEEEeeCce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM---QGGLEF---KTEIELLSRVHHKNLVGLVGFCFEQGEQ 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~---~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 698 (964)
.++|.+.+.||+|+||+||+|+.. +|+.||||+++.... .....+ +.++.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999964 699999999864321 112223 3446677788999999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
|||||||+||+|.+++...+ .+++.++..++.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+|+..
T Consensus 268 ylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeec
Confidence 99999999999999997653 6899999999999999999999988 999999999999999999999999999977
Q ss_pred cCCCCCceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCc--hhHHHHHHHhccCcccccccc
Q 002121 779 SDSSKGHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGK--YVVREVRTAMNRDDEEHYGLT 855 (964)
Q Consensus 779 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~ 855 (964)
.... ....+||+.|||||++.. ..|+.++||||+||++|||++|+.||.... ............... ..
T Consensus 343 ~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~----~p 414 (689)
T 3v5w_A 343 SKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE----LP 414 (689)
T ss_dssp SSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCC----CC
T ss_pred CCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC----CC
Confidence 5432 234689999999999975 579999999999999999999999996422 222222222222111 11
Q ss_pred cccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCC-----HHHHHH
Q 002121 856 EMMDPTIRNTVLLGFRRYLELALQCVEESATDRPT-----MSEVVK 896 (964)
Q Consensus 856 ~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 896 (964)
..+. ..+.+++.+||+.||++|++ ++||.+
T Consensus 415 ~~~S-----------~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 DSFS-----------PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp TTSC-----------HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ccCC-----------HHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1111 34568999999999999998 677754
No 25
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.4e-43 Score=426.27 Aligned_cols=366 Identities=22% Similarity=0.276 Sum_probs=311.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCC-----------CCCCCCCCCCCCC---ccEEecC-CCeeEEEcCCCCccccccCCcCCC
Q 002121 23 ATDSRDAAALQSLKDAWQNTP-----------PTWKNSDDPCGSW---EGVTCNN-SRVTALGLSTMGLTGKLSGDIGGL 87 (964)
Q Consensus 23 ~~~~~~~~aL~~~k~~~~~~~-----------~~W~~~~~~C~~w---~gv~C~~-~~v~~L~L~~~~l~g~~~~~l~~l 87 (964)
+....|+.||.+|+.++..+. .+|..+.++| .| .||.|+. ++|+.|+|++++++|.+|++|++|
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L 104 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQL 104 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-GTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGC
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcC
Confidence 344679999999999975332 3798776766 89 9999975 699999999999999999999999
Q ss_pred CcccEEecccCC--------------------------------------------------------------------
Q 002121 88 TELRSLDLSYNG-------------------------------------------------------------------- 99 (964)
Q Consensus 88 ~~L~~L~L~~N~-------------------------------------------------------------------- 99 (964)
++|++|+|++|.
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 184 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCC
T ss_pred ccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchh
Confidence 999999999982
Q ss_pred ---------CCCCCCCCCCCCcccchhhccccccccCc-----------------CCcccC--CCCCccEEEcccCcccC
Q 002121 100 ---------GLTGSLSPRIGDLQKLNILILAGCGFTGN-----------------IPDEIG--NLAELSFLALNSNNFSG 151 (964)
Q Consensus 100 ---------~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l~~ 151 (964)
.+.| +|..|+++++|++|+|++|.|++. +|..++ ++++|++|+|++|++.+
T Consensus 185 ~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~ 263 (636)
T 4eco_A 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLT 263 (636)
T ss_dssp TTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCS
T ss_pred hhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCc
Confidence 2334 788899999999999999999986 999999 99999999999999999
Q ss_pred cCCCcCCCccccccccccccc-ccc-ccCcccCCCCccccccCCCeeEccCCcccccccc-cccCCCcceeEEEccCCcC
Q 002121 152 RIPPSLGKLSQLYWLDLADNQ-LTG-SIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISE-QLFSPDMVLIHVLFDGNQL 228 (964)
Q Consensus 152 ~~p~~~~~l~~L~~L~Ls~N~-l~g-~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~-~~f~~~~~L~~L~l~~N~l 228 (964)
.+|..|+++++|++|+|++|+ ++| .+|..+.....+..+++|++|++++|+++ .+|. ..+..+++|++|++++|++
T Consensus 264 ~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l 342 (636)
T 4eco_A 264 KLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQL 342 (636)
T ss_dssp SCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCC
T ss_pred cChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcC
Confidence 999999999999999999998 998 88843221112233499999999999999 8887 4678889999999999999
Q ss_pred cccCCcccCCCCCCcEEEcccCcCccccCccccCCCC-CCeeeccCccCccCCCCCCCCC--CCCEEEccCCCCCCCCCC
Q 002121 229 SGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTN-VNELNLAHNDLKGPFPDLSQMN--SLSYVDLSNNSFDPTEAP 305 (964)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~~~l~~l~--~L~~L~Ls~N~l~~~~~~ 305 (964)
+|.+| .++.+++|+.|+|++|+++ .+|..|.++++ |++|+|++|.++.++..+..+. +|++|++++|.++ ...|
T Consensus 343 ~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~-~~~p 419 (636)
T 4eco_A 343 EGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIG-SVDG 419 (636)
T ss_dssp EEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTT-TTTT
T ss_pred ccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcCC-Ccch
Confidence 99999 8999999999999999999 88999999999 9999999999997666666554 8999999999998 6667
Q ss_pred cccC-------CCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCC-------CCcEEeccCCc
Q 002121 306 LWFS-------TLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGP-------LLQLVDLQNNQ 371 (964)
Q Consensus 306 ~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-------~L~~L~L~~N~ 371 (964)
..+. .+++|+.|+|++|+++...+..+..+++|+.|+|++|+++...+..+.... +|+.|+|++|+
T Consensus 420 ~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~ 499 (636)
T 4eco_A 420 KNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNK 499 (636)
T ss_dssp CSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSC
T ss_pred hhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCc
Confidence 7777 788999999999999965555667799999999999999965555555443 89999999999
Q ss_pred ceeeccC----CCcccceeEeecCCcc
Q 002121 372 ISAITLG----SGIKNYTLILVGNPVC 394 (964)
Q Consensus 372 l~~i~~~----~~~~l~~l~l~~Np~c 394 (964)
++.++.. ....++.|+|++|.+.
T Consensus 500 l~~lp~~~~~~~l~~L~~L~Ls~N~l~ 526 (636)
T 4eco_A 500 LTKLSDDFRATTLPYLVGIDLSYNSFS 526 (636)
T ss_dssp CCBCCGGGSTTTCTTCCEEECCSSCCS
T ss_pred CCccChhhhhccCCCcCEEECCCCCCC
Confidence 9988754 3456888999999864
No 26
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.4e-43 Score=435.93 Aligned_cols=362 Identities=29% Similarity=0.382 Sum_probs=256.1
Q ss_pred hhccCCCHHHHHHHHHHHHHcCCC--CCCCCCCCCCCCCCccEEecCCCeeEEEcCCCCcccc---ccCCcCCCCcccEE
Q 002121 19 LISSATDSRDAAALQSLKDAWQNT--PPTWKNSDDPCGSWEGVTCNNSRVTALGLSTMGLTGK---LSGDIGGLTELRSL 93 (964)
Q Consensus 19 ~~~~~~~~~~~~aL~~~k~~~~~~--~~~W~~~~~~C~~w~gv~C~~~~v~~L~L~~~~l~g~---~~~~l~~l~~L~~L 93 (964)
++++++.++|++||++||+++.+. .++|..++||| +|.||+|+.++|+.|+|+++++.|. +|+++.+|++|+.+
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C-~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC-TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG-GSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred CccccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc-CCcceEECCCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 344555688999999999999743 27898666666 9999999989999999999999998 88888888888888
Q ss_pred ecccCCCCCCCCCCCCCCcccchhhccccccccCcCCc--ccCCCCCccEEEcccCcccCcCCCcC-CCccccccccccc
Q 002121 94 DLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPD--EIGNLAELSFLALNSNNFSGRIPPSL-GKLSQLYWLDLAD 170 (964)
Q Consensus 94 ~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~ 170 (964)
+++.| .+. .+|..|+++++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++
T Consensus 83 ~~~~~-~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 83 FLSNS-HIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp ECTTS-CEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred CCcCC-CcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 88887 332 3567888888888888888888888887 88888888888888888887777765 7788888888888
Q ss_pred cccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccC
Q 002121 171 NQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRN 250 (964)
Q Consensus 171 N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 250 (964)
|++++..|... ..+..+++|++|++++|.+++.++. ..+++|++|++++|++++.+|. ++++++|++|+|++|
T Consensus 161 n~l~~~~~~~~---~~~~~l~~L~~L~Ls~n~l~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n 233 (768)
T 3rgz_A 161 NSISGANVVGW---VLSDGCGELKHLAISGNKISGDVDV---SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGN 233 (768)
T ss_dssp SCCEEETHHHH---HHTTCCTTCCEEECCSSEEESCCBC---TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSS
T ss_pred CccCCcCChhh---hhhccCCCCCEEECCCCcccccCCc---ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCC
Confidence 88886665210 0145667777777777777655543 5566677777777777766665 677777777777777
Q ss_pred cCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCC-CCCcEEECCCCccccccC
Q 002121 251 ALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTL-PSLTTLICEFGSLQGRVP 329 (964)
Q Consensus 251 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p 329 (964)
.+++.+|..|.++++|++|+|++|.+++..|.. .+++|++|+|++|.++ ..+|..+..+ ++|++|+|++|++++.+|
T Consensus 234 ~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~-~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p 311 (768)
T 3rgz_A 234 KLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFT-GEIPDFLSGACDTLTGLDLSGNHFYGAVP 311 (768)
T ss_dssp CCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSEEE-ESCCCCSCTTCTTCSEEECCSSEEEECCC
T ss_pred cCCCcccHHHhcCCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCccC-CccCHHHHhhcCcCCEEECcCCcCCCccc
Confidence 777777777777777777777777777666554 6666666666666665 3344444443 666666666666666666
Q ss_pred hhccCCCCCCEEEcCCcccccccCCC-CccCCCCcEEeccCCccee-eccC--CCc-ccceeEeecCC
Q 002121 330 DKLFSYSQIQQVKLRNNAFNNTLDMG-NAVGPLLQLVDLQNNQISA-ITLG--SGI-KNYTLILVGNP 392 (964)
Q Consensus 330 ~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~-i~~~--~~~-~l~~l~l~~Np 392 (964)
..|..+++|++|+|++|++++.+|.. +..+++|+.|+|++|+++. ++.. ... .++.|+|.+|.
T Consensus 312 ~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~ 379 (768)
T 3rgz_A 312 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 379 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSE
T ss_pred hHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCC
Confidence 66666666666666666666555544 6666666666666666663 2221 111 45556666655
No 27
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-42 Score=429.63 Aligned_cols=363 Identities=24% Similarity=0.356 Sum_probs=244.7
Q ss_pred cCCCHHHHHHHHHHHHHcCCCCCCCCCCC-----CCC-CCC------------ccEEec-CCCeeEEEcCCCCccccccC
Q 002121 22 SATDSRDAAALQSLKDAWQNTPPTWKNSD-----DPC-GSW------------EGVTCN-NSRVTALGLSTMGLTGKLSG 82 (964)
Q Consensus 22 ~~~~~~~~~aL~~~k~~~~~~~~~W~~~~-----~~C-~~w------------~gv~C~-~~~v~~L~L~~~~l~g~~~~ 82 (964)
+++..+|+.||++||+++.+. +|+.++ +|| |+| .||.|+ .++|+.|+|++++++|.+|+
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~--~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK--NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG--GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG
T ss_pred cccchHHHHHHHHHHHHcCCC--CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch
Confidence 445568999999999999544 897665 562 599 999998 48999999999999999999
Q ss_pred CcCCCCcccEEec-ccCCCCCCC---------------------------------------------------------
Q 002121 83 DIGGLTELRSLDL-SYNGGLTGS--------------------------------------------------------- 104 (964)
Q Consensus 83 ~l~~l~~L~~L~L-~~N~~l~~~--------------------------------------------------------- 104 (964)
+|++|++|++|+| ++| .+.|.
T Consensus 342 ~l~~L~~L~~LdLss~N-~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHS-ETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp GGGGCTTCCEEESCCTT-HHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred HHhccccceEeeecccc-cccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 9999999999999 666 44333
Q ss_pred -------------------CCCCCCCcccchhhccccccccC-----------------cCCcccC--CCCCccEEEccc
Q 002121 105 -------------------LSPRIGDLQKLNILILAGCGFTG-----------------NIPDEIG--NLAELSFLALNS 146 (964)
Q Consensus 105 -------------------~p~~l~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~L~Ls~ 146 (964)
+|..|+++++|++|+|++|.|++ .+|..++ ++++|++|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 78889999999999999999998 3999988 999999999999
Q ss_pred CcccCcCCCcCCCccccccccccccc-ccc-ccCcccCCC------------------------C--ccccccCCCeeEc
Q 002121 147 NNFSGRIPPSLGKLSQLYWLDLADNQ-LTG-SIPVSTITS------------------------P--GLDQLKNAKHFHF 198 (964)
Q Consensus 147 N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g-~iP~~~~~~------------------------~--~l~~l~~L~~L~L 198 (964)
|++.+.+|..|+++++|++|+|++|+ ++| .+|..+... . .+..+++|+.|+|
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~L 580 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDC 580 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEEC
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEEC
Confidence 99999999999999999999999998 988 677432111 1 3455556666666
Q ss_pred cCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCC-CcEEEcccCcCccccCccccCCCC--CCeeeccCcc
Q 002121 199 NKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQT-LEVLRLDRNALTGKVPTNLNNLTN--VNELNLAHND 275 (964)
Q Consensus 199 ~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~Ls~N~ 275 (964)
++|+++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|.|+ .+|..+..++. |+.|+|++|+
T Consensus 581 s~N~l~-~lp--~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~ 655 (876)
T 4ecn_A 581 VHNKVR-HLE--AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNK 655 (876)
T ss_dssp TTSCCC-BCC--CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSC
T ss_pred CCCCcc-cch--hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCc
Confidence 666665 555 4555666666666666666 56655666666 666666666655 44444433321 3333333333
Q ss_pred CccCCCCC------------------------------CCCCCCCEEEccCCCCCC------------------------
Q 002121 276 LKGPFPDL------------------------------SQMNSLSYVDLSNNSFDP------------------------ 301 (964)
Q Consensus 276 l~~~~~~l------------------------------~~l~~L~~L~Ls~N~l~~------------------------ 301 (964)
+++.+|.+ ..+++|+.|+|++|+++.
T Consensus 656 l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~L 735 (876)
T 4ecn_A 656 IGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDL 735 (876)
T ss_dssp TTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEEC
T ss_pred CCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEEC
Confidence 33322110 123344444444444430
Q ss_pred -----CCCCcccC--CCCCCcEEECCCCccccccChhccCCCCCCEEEcCC------cccccccCCCCccCCCCcEEecc
Q 002121 302 -----TEAPLWFS--TLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRN------NAFNNTLDMGNAVGPLLQLVDLQ 368 (964)
Q Consensus 302 -----~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~------N~l~~~~~~~~~~l~~L~~L~L~ 368 (964)
..+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|+|+
T Consensus 736 s~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls 814 (876)
T 4ecn_A 736 RFNKLTSLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIG 814 (876)
T ss_dssp CSSCCCCCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECC
T ss_pred CCCCCccchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECC
Confidence 12333343 55555555555555554 455555555555555544 55555555556666666666666
Q ss_pred CCcceeeccCCCcccceeEeecCCc
Q 002121 369 NNQISAITLGSGIKNYTLILVGNPV 393 (964)
Q Consensus 369 ~N~l~~i~~~~~~~l~~l~l~~Np~ 393 (964)
+|+|..||......+..|+|++||+
T Consensus 815 ~N~L~~Ip~~l~~~L~~LdLs~N~l 839 (876)
T 4ecn_A 815 SNDIRKVDEKLTPQLYILDIADNPN 839 (876)
T ss_dssp SSCCCBCCSCCCSSSCEEECCSCTT
T ss_pred CCCCCccCHhhcCCCCEEECCCCCC
Confidence 6666555554444555566666653
No 28
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.7e-43 Score=410.34 Aligned_cols=395 Identities=20% Similarity=0.277 Sum_probs=268.7
Q ss_pred CCCCCCCchhHhh-HHHHHHHHhCcccceEEeecccccCCcc------eeEEEeec---------------CCCcceeec
Q 002121 453 SFRELSNVTVFHS-LEMSLWVKLGLTPGSVFLQNPFFNIDDY------LQIQVALF---------------PSGEKSFNR 510 (964)
Q Consensus 453 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~---------------~~~~~~~~~ 510 (964)
+|++++-+++... .+.+||......-.++++|++|+++.+. ++.+.|++ +.|+|++|.
T Consensus 29 ~~~~gd~i~v~~~~~~~~ww~~~~~~g~~G~~P~~yv~~~~~~~~~~~~~~~~wyhg~i~r~~ae~~L~~~~~G~FlvR~ 108 (450)
T 1k9a_A 29 PFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLYPPETGLFLVRE 108 (450)
T ss_dssp CBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECCCCCCCTTEESCTTBCTTCCHHHHHHHTCSCCTTEEEEEE
T ss_pred CCCCCCEEEEeeccCCCCceEEEECCCceeeechhccccccccccccccccccccccCcCHHHhhhhhccCCCceEEEEe
Confidence 4778888888776 5678998776544469999999988655 57778887 459999999
Q ss_pred cceeeeeeEeecceeCCCcccCCcccccCCcccccCCCCCCCCcceeehhHHHHHHHHHHHHHHHHHHhhhhhhhhhhcC
Q 002121 511 SEVQKIGFELSNQTYKPPKEFGPYYFIASPYAFQVPQGGNSISPGVAAGIACGGAVLVLGLVGLGLYAIRQKKRAERAIG 590 (964)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~~~~ 590 (964)
|+.....+.++...-....++. +......+... ......... -+.-+... . ..+
T Consensus 109 S~~~~g~~~Lsv~~~~~v~H~~---I~~~~~~~~i~-------~~~~F~sl~----------eLv~~y~~--~----~~~ 162 (450)
T 1k9a_A 109 STNYPGDYTLCVSCEGKVEHYR---IMYHASKLSID-------EEVYFENLM----------QLVEHYTT--D----ADG 162 (450)
T ss_dssp CSSSTTSEEEEEECSSSEEEEE---EEEETTEEESS-------SSSCBSSHH----------HHHHHHHH--C----CTT
T ss_pred cCCCCCceEEEEEeCCeeeEEE---EEecCCceEec-------cccccccHH----------HHHhhhcc--c----ccc
Confidence 9887666666653211000000 00000000000 000000000 00111110 0 001
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCcccccHHHHHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHH
Q 002121 591 LSKPFASWAPSGKDSGGAPQLKGARWFSYDELKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEF 670 (964)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~ 670 (964)
....... +... . . + ......+..++++...++|...+.||+|+||.||+|.+. |+.||||+++... ..+.|
T Consensus 163 ~~~~l~~--~~~~-~-~-~-~~~~~~~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~ 233 (450)
T 1k9a_A 163 LCTRLIK--PKVM-E-G-T-VAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAF 233 (450)
T ss_dssp SSSCCCE--ECCC-T-T-C-EEHHHHHHHTTCBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHH
T ss_pred hhhhccc--cccc-c-C-c-ccchhhhcccccccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHH
Confidence 0000000 0000 0 0 0 000000111222334567888999999999999999985 7899999998654 34679
Q ss_pred HHHHHHHHhcCCCCccceeEEEEeeC-ceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCe
Q 002121 671 KTEIELLSRVHHKNLVGLVGFCFEQG-EQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPI 749 (964)
Q Consensus 671 ~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 749 (964)
.+|+++|++++|||||++++++.+.+ ..++|||||++|+|.+++.......+++..++.++.||++||+|||+.+ |
T Consensus 234 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i 310 (450)
T 1k9a_A 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---F 310 (450)
T ss_dssp HHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred HHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 99999999999999999999987765 7899999999999999998665445799999999999999999999988 9
Q ss_pred eccCCCCCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCC
Q 002121 750 IHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQ 828 (964)
Q Consensus 750 vH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~ 828 (964)
+||||||+|||+++++.+||+|||+++..... .....+++.|+|||++.+..++.++|||||||++|||+| |+.
T Consensus 311 vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~ 385 (450)
T 1k9a_A 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 385 (450)
T ss_dssp ECSCCCGGGEEECTTSCEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred eCCCCCHhhEEECCCCCEEEeeCCCccccccc-----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999864322 122357899999999999999999999999999999999 999
Q ss_pred CCCCCchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 829 PIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 829 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
||..... .+.... +..... ..... .....+.+++.+||+.||++|||+.|+++.|+.+...+
T Consensus 386 P~~~~~~-~~~~~~-i~~~~~----------~~~p~---~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 386 PYPRIPL-KDVVPR-VEKGYK----------MDAPD---GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp SSTTSCT-TTHHHH-HHTTCC----------CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CCCCCCH-HHHHHH-HHcCCC----------CCCCC---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 9964321 111111 111110 00011 11245678999999999999999999999999987653
No 29
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.5e-42 Score=377.73 Aligned_cols=280 Identities=34% Similarity=0.613 Sum_probs=229.7
Q ss_pred cccccHHHHHHhhcCCCcc------ceeecCCcEEEEEEEecCCcEEEEEEecCCC----cchhHHHHHHHHHHHhcCCC
Q 002121 614 ARWFSYDELKKCSNNFSES------NEIGSGGYGKVYRGMLSDGQVVAIKRAQQGS----MQGGLEFKTEIELLSRVHHK 683 (964)
Q Consensus 614 ~~~~~~~el~~~~~~~~~~------~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~ 683 (964)
...|+++++..++++|... +.||+|+||+||+|.. +++.||||++.... ......+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4568999999999999988 8999999999999997 58899999987532 22345789999999999999
Q ss_pred CccceeEEEEeeCceEEEEEeccCCChhhhhcCCC-CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEEC
Q 002121 684 NLVGLVGFCFEQGEQMLVYEFMANGTLRESLSGRS-GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLD 762 (964)
Q Consensus 684 nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~ 762 (964)
||+++++++.+.+..++||||+++|+|.+++.... ...++|..++.++.|++.||+|||+.+ |+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEc
Confidence 99999999999999999999999999999987532 346999999999999999999999988 99999999999999
Q ss_pred CCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCch---hHHH
Q 002121 763 ENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKY---VVRE 839 (964)
Q Consensus 763 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~---~~~~ 839 (964)
+++.+||+|||+++...............||+.|+|||.+.+ .++.++||||||+++|||++|+.||..... ....
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence 999999999999987654433333445679999999998764 589999999999999999999999974321 1222
Q ss_pred HHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 002121 840 VRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLL 902 (964)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 902 (964)
........ ..+.+.+++.+..........+.+++.+||+.||++||++.|+++.|+++.
T Consensus 247 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 247 KEEIEDEE----KTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHTTS----CCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHhhhhh----hhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 22211111 113344444444444556677889999999999999999999999999874
No 30
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4e-44 Score=425.97 Aligned_cols=391 Identities=26% Similarity=0.421 Sum_probs=276.6
Q ss_pred CCCCCCCchhHhhHHHHHHHHhCcccc-eEEeecccccCCcceeEEEeec-----------------CCCcceeecccee
Q 002121 453 SFRELSNVTVFHSLEMSLWVKLGLTPG-SVFLQNPFFNIDDYLQIQVALF-----------------PSGEKSFNRSEVQ 514 (964)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 514 (964)
+|++++-++++...+.+||.......+ ++|+|.+|++..+.++.+.|++ +.|.|++|.|+..
T Consensus 103 ~~~~gd~i~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~~l~~~~wy~g~i~r~~ae~~L~~~~~~~G~FLvR~S~~~ 182 (535)
T 2h8h_A 103 SFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETT 182 (535)
T ss_dssp CBCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEETTSGGGSTTBCCSCCHHHHHHHHTCTTCCTTEEEEEECSSS
T ss_pred CcCCCCEEEEEEecCCCceEEEECCCCcceEecchhhcccccccccceeccccCHHHHHHHhccCCCCCCeEEEEecCCC
Confidence 478888888888878899988766444 6999999999999998899988 3499999999987
Q ss_pred eeeeEeecceeC-----------CCcccCCcccccCCcccccCCCCCCCCcceeehhHHHHHHHHHHHHHHHHHHhhhhh
Q 002121 515 KIGFELSNQTYK-----------PPKEFGPYYFIASPYAFQVPQGGNSISPGVAAGIACGGAVLVLGLVGLGLYAIRQKK 583 (964)
Q Consensus 515 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 583 (964)
...+.++..... ........+++.....+ ..+. -++-++.. .
T Consensus 183 ~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~i~~~~~F--------------~SL~-----------eLv~~y~~--~ 235 (535)
T 2h8h_A 183 KGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQF--------------NSLQ-----------QLVAYYSK--H 235 (535)
T ss_dssp TTCEEEEEEEEETTTEEEEEEEEEBC-CCSCEEEETTEEE--------------SSHH-----------HHHHHHHH--C
T ss_pred CCcEEEEEEeeccCCCCceEEEEEEEcCCCcEEeeccccc--------------cChH-----------Hhheeecc--c
Confidence 777777765421 11000011111110000 0000 01111111 0
Q ss_pred hhhhhcCCCCCCCcCCCCCCCCCCCCCCCCcccccHHHHHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCC
Q 002121 584 RAERAIGLSKPFASWAPSGKDSGGAPQLKGARWFSYDELKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGS 663 (964)
Q Consensus 584 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~ 663 (964)
. .+.........+.. .+. ...+..++++...++|...+.||+|+||.||+|.+.++..||||+++...
T Consensus 236 ~----~~~~~~l~~~~~~~-----~~~---~~~~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~ 303 (535)
T 2h8h_A 236 A----DGLCHRLTTVCPTS-----KPQ---TQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT 303 (535)
T ss_dssp C----TTSSSCCCEECCCC-----CCC---CSSSSTTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS
T ss_pred c----Cccccccccccccc-----ccc---ccccCccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC
Confidence 0 01000000000000 000 01122233344566788899999999999999999888889999998654
Q ss_pred cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhh
Q 002121 664 MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHE 743 (964)
Q Consensus 664 ~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~ 743 (964)
. ..++|.+|+++|++++|||||++++++.+ +..++|||||++|+|.+++....+..+++.+++.++.||++||+|||+
T Consensus 304 ~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~ 381 (535)
T 2h8h_A 304 M-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381 (535)
T ss_dssp S-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3 34679999999999999999999999876 778999999999999999975433468999999999999999999999
Q ss_pred cCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHH
Q 002121 744 LANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLEL 823 (964)
Q Consensus 744 ~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el 823 (964)
.+ ||||||||+|||+++++.+||+|||+++...... ........++..|+|||++..+.++.++|||||||++|||
T Consensus 382 ~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el 457 (535)
T 2h8h_A 382 MN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457 (535)
T ss_dssp TT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred CC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence 88 9999999999999999999999999998654211 1112234577899999999999999999999999999999
Q ss_pred Hh-CCCCCCCCchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 002121 824 IT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLL 902 (964)
Q Consensus 824 lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 902 (964)
++ |+.||..... .+.+.. +..... . ..... ....+.+++.+||+.||++||++.+|++.|+.+.
T Consensus 458 ~t~g~~P~~~~~~-~~~~~~-i~~~~~----~--~~~~~-------~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 458 TTKGRVPYPGMVN-REVLDQ-VERGYR----M--PCPPE-------CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp TTTTCCSSTTCCH-HHHHHH-HHTTCC----C--CCCTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred HhCCCCCCCCCCH-HHHHHH-HHcCCC----C--CCCCC-------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 99 8999864322 222222 211110 0 00111 1245678999999999999999999999998765
Q ss_pred H
Q 002121 903 Q 903 (964)
Q Consensus 903 ~ 903 (964)
.
T Consensus 523 ~ 523 (535)
T 2h8h_A 523 T 523 (535)
T ss_dssp C
T ss_pred h
Confidence 3
No 31
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.3e-42 Score=379.31 Aligned_cols=270 Identities=29% Similarity=0.473 Sum_probs=206.4
Q ss_pred cHHHHHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCCCCccceeEEEEee
Q 002121 618 SYDELKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHHKNLVGLVGFCFEQ 695 (964)
Q Consensus 618 ~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 695 (964)
+.+++....++|++.+.||+|+||+||+|+. +|+.||||++...... ...++.+|++++++++||||+++++++.+.
T Consensus 28 ~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 106 (309)
T 3p86_A 28 DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106 (309)
T ss_dssp ----CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred CcccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 3344445567899999999999999999987 5889999998765433 335788999999999999999999999999
Q ss_pred CceEEEEEeccCCChhhhhcCCC-CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccc
Q 002121 696 GEQMLVYEFMANGTLRESLSGRS-GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGL 774 (964)
Q Consensus 696 ~~~~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGl 774 (964)
+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++|+||||||+|||++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~ 185 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGL 185 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC-
T ss_pred CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCC
Confidence 99999999999999999998654 224899999999999999999999875 5699999999999999999999999999
Q ss_pred ceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccc
Q 002121 775 SKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGL 854 (964)
Q Consensus 775 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (964)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +........... ...
T Consensus 186 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-~~~~~~~~~~~~--~~~ 260 (309)
T 3p86_A 186 SRLKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-QVVAAVGFKCKR--LEI 260 (309)
T ss_dssp ------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-HHHHHHHHSCCC--CCC
T ss_pred Cccccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCC--CCC
Confidence 98654321 2233457999999999999999999999999999999999999999754322 122111111110 001
Q ss_pred ccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 855 TEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 855 ~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
...+ ...+.+++.+||+.||++|||+.|+++.|+.+++..
T Consensus 261 ~~~~-----------~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 261 PRNL-----------NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CTTS-----------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CccC-----------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 1111 134678999999999999999999999999998654
No 32
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.9e-41 Score=372.74 Aligned_cols=250 Identities=24% Similarity=0.383 Sum_probs=208.5
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEe
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
.++|+..+.||+|+||+||+|.. .+|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 45799999999999999999995 57899999998766555567789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKG 784 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 784 (964)
+++|+|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 9999999999764 4899999999999999999999988 99999999999999999999999999987654332
Q ss_pred ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccchh
Q 002121 785 HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRN 864 (964)
Q Consensus 785 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 864 (964)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.................. ....+
T Consensus 172 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-------~~~~~---- 239 (297)
T 3fxz_A 172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-------ELQNP---- 239 (297)
T ss_dssp -CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC-------CCSCG----
T ss_pred -ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-------CCCCc----
Confidence 234467999999999999999999999999999999999999999754433222221111111 00000
Q ss_pred hhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 865 TVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 865 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
......+.+++.+||+.||++|||+.|+++
T Consensus 240 --~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 240 --EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp --GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 111244668999999999999999999975
No 33
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.4e-41 Score=375.01 Aligned_cols=261 Identities=21% Similarity=0.325 Sum_probs=215.9
Q ss_pred ccccHHHHHHhhcC----------CCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCC
Q 002121 615 RWFSYDELKKCSNN----------FSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHK 683 (964)
Q Consensus 615 ~~~~~~el~~~~~~----------~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ 683 (964)
..+++++++.+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45889999988875 667789999999999999975 7999999999876666667899999999999999
Q ss_pred CccceeEEEEeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC
Q 002121 684 NLVGLVGFCFEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE 763 (964)
Q Consensus 684 nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~ 763 (964)
||+++++++...+..++||||+++|+|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTL 176 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECC
Confidence 9999999999999999999999999999998753 5999999999999999999999988 999999999999999
Q ss_pred CCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002121 764 NLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTA 843 (964)
Q Consensus 764 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 843 (964)
++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.....
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-~~~~~~~ 253 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-VQAMKRL 253 (321)
T ss_dssp TCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHH
T ss_pred CCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHH
Confidence 99999999999987654322 23345799999999999999999999999999999999999999975432 2222222
Q ss_pred hccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 844 MNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 844 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..... +.+.. .......+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~-----------~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 254 RDSPP-----------PKLKN-SHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHSSC-----------CCCTT-GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hcCCC-----------CCcCc-cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 21111 00000 0011244668999999999999999999986
No 34
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=7.8e-42 Score=380.44 Aligned_cols=263 Identities=26% Similarity=0.367 Sum_probs=209.7
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCc----eEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE----QMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~lV 701 (964)
.++|+..+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++|||||++++++.+... .++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467889999999999999999985 7999999986532 233456679999999999999999999988654 6999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhc----------CCCCeeccCCCCCcEEECCCCcEEEee
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHEL----------ANPPIIHRDVKSTNILLDENLTAKVAD 771 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------~~~~ivH~Dlk~~NILl~~~~~~kl~D 771 (964)
|||+++|+|.++++.. .++|.++..++.|+++||+|||+. + |+||||||+|||++.++.+||+|
T Consensus 101 ~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECC
T ss_pred EecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEcc
Confidence 9999999999999764 499999999999999999999987 6 99999999999999999999999
Q ss_pred cccceeecCCCCCceeecccccCcccCcccccc-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCch-----------
Q 002121 772 FGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMT-----QQLTEKSDVYSFGVVMLELITAKQPIEKGKY----------- 835 (964)
Q Consensus 772 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~----------- 835 (964)
||+++...............||+.|+|||++.+ ..++.++|||||||++|||+||+.||.....
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 999988765443333444679999999999876 3566789999999999999999999863211
Q ss_pred ---hHHHHHHHhccCcccccccccccCccchhh--hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 836 ---VVREVRTAMNRDDEEHYGLTEMMDPTIRNT--VLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 836 ---~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
....+....... ...+.+... .......+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 255 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 255 QHPSLEDMQEVVVHK---------KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SSCCHHHHHHHHTTS---------CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCchhhhhhhhhcc---------cCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 011111111111 111111111 2233456889999999999999999999999999987654
No 35
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.7e-41 Score=384.99 Aligned_cols=261 Identities=25% Similarity=0.428 Sum_probs=211.8
Q ss_pred hcCCCccceeecCCcEEEEEEEec--------CCcEEEEEEecCCCc-chhHHHHHHHHHHHhc-CCCCccceeEEEEee
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS--------DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQ 695 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 695 (964)
.++|...+.||+|+||+||+|+.. ++..||||+++.... ....++.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467888999999999999999852 356899999976533 2345789999999999 899999999999999
Q ss_pred CceEEEEEeccCCChhhhhcCCC--------------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE
Q 002121 696 GEQMLVYEFMANGTLRESLSGRS--------------GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL 761 (964)
Q Consensus 696 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 761 (964)
+..++||||+++|+|.+++.... ...+++.+++.++.||++||+|||+.+ |+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 99999999999999999997543 135899999999999999999999988 9999999999999
Q ss_pred CCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002121 762 DENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREV 840 (964)
Q Consensus 762 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 840 (964)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |+.||..... .+..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-~~~~ 315 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-EELF 315 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-GGHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-HHHH
Confidence 9999999999999987654433333344567889999999999999999999999999999999 9999864321 1111
Q ss_pred HHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 841 RTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
........ +.... .....+.+++.+||+.||++||++.|+++.|+.+++.
T Consensus 316 ~~~~~~~~-----------~~~~~---~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 316 KLLKEGHR-----------MDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp HHHHTTCC-----------CCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhcCCC-----------CCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11111110 00010 1124567899999999999999999999999998754
No 36
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.3e-41 Score=371.59 Aligned_cols=262 Identities=24% Similarity=0.415 Sum_probs=210.2
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEec
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFM 705 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 705 (964)
++|...+.||+|+||+||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 56788899999999999999964 68999999987766666678999999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCCc
Q 002121 706 ANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGH 785 (964)
Q Consensus 706 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 785 (964)
++|+|.+++.... ..++|.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.........
T Consensus 90 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 90 KGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp TTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred CCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999998643 46999999999999999999999988 9999999999999999999999999998764332211
Q ss_pred ------------eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccc
Q 002121 786 ------------VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYG 853 (964)
Q Consensus 786 ------------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 853 (964)
......||+.|+|||++.+..++.++|||||||++|||++|..|+....... ......
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~----------~~~~~~ 235 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT----------MDFGLN 235 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBC----------TTSSBC
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhH----------HHHhhh
Confidence 1114579999999999999999999999999999999999999875321000 000000
Q ss_pred cccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 854 LTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
.....+... .......+.+++.+||+.||++||++.|+++.|+.+....
T Consensus 236 ~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 236 VRGFLDRYC---PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp HHHHHHHTC---CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hhccccccC---CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 000000000 0011134668999999999999999999999999887653
No 37
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=375.10 Aligned_cols=262 Identities=27% Similarity=0.438 Sum_probs=210.2
Q ss_pred hcCCCccceeecCCcEEEEEEEec----CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS----DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
.++|.+.+.||+|+||+||+|... .+..||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 357888899999999999999974 345699999986533 344679999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 128 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 999999999999997653 36999999999999999999999988 99999999999999999999999999987654
Q ss_pred CCC-CceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCccccccccccc
Q 002121 781 SSK-GHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 781 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... +.......... . ..
T Consensus 204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-~~~~~~~~~~~-----~--~~ 275 (325)
T 3kul_A 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-DVISSVEEGYR-----L--PA 275 (325)
T ss_dssp ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-HHHHHHHTTCC-----C--CC
T ss_pred CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHHcCCC-----C--CC
Confidence 322 122333456889999999998999999999999999999999 99999643321 22222111111 0 00
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCC
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDG 906 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 906 (964)
... ....+.+++.+||+.||++||++.|+++.|+.+++...
T Consensus 276 ~~~-------~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 276 PMG-------CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp CTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred CCC-------cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 111 12456789999999999999999999999999986653
No 38
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.1e-41 Score=385.24 Aligned_cols=272 Identities=25% Similarity=0.417 Sum_probs=219.5
Q ss_pred ccHHHHHHhhcCCCccceeecCCcEEEEEEEe------cCCcEEEEEEecCCCcc-hhHHHHHHHHHHHhc-CCCCccce
Q 002121 617 FSYDELKKCSNNFSESNEIGSGGYGKVYRGML------SDGQVVAIKRAQQGSMQ-GGLEFKTEIELLSRV-HHKNLVGL 688 (964)
Q Consensus 617 ~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~------~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l 688 (964)
+...++....++|...+.||+|+||.||+|++ .+++.||||+++..... ..+.+.+|++++.++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 55667777889999999999999999999984 24679999999865433 345799999999999 79999999
Q ss_pred eEEEEeeCc-eEEEEEeccCCChhhhhcCCCC------------------------------------------------
Q 002121 689 VGFCFEQGE-QMLVYEFMANGTLRESLSGRSG------------------------------------------------ 719 (964)
Q Consensus 689 ~~~~~~~~~-~~lV~E~~~~gsL~~~l~~~~~------------------------------------------------ 719 (964)
++++.+.+. .++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987654 8999999999999999976532
Q ss_pred ----------------CccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC
Q 002121 720 ----------------IHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 720 ----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 783 (964)
..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 12899999999999999999999988 99999999999999999999999999987655444
Q ss_pred CceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccCccc
Q 002121 784 GHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTI 862 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (964)
........||+.|+|||++.+..++.++|||||||++|||+| |+.||................... ......
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~---- 321 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM---RAPDYT---- 321 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCC---CCCTTC----
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCC---CCCCCC----
Confidence 444555678999999999999999999999999999999998 999996543222222221111110 011111
Q ss_pred hhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 863 RNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 863 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
...+.+++.+||+.||++|||+.|+++.|+.+++..
T Consensus 322 -------~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 322 -------TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp -------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 134678999999999999999999999999988653
No 39
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=377.96 Aligned_cols=251 Identities=22% Similarity=0.359 Sum_probs=199.5
Q ss_pred hhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
..++|...+.||+|+||+||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 457899999999999999999995 5799999999876443 23457899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 9999999999997543 5899999999999999999999988 9999999999999999999999999998654332
Q ss_pred CCceeecccccCcccCccccccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... .............. ....++
T Consensus 163 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-~~~~~~~i~~~~~~----~p~~~s-- 234 (347)
T 3zgw_A 163 D-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-VMALYKKIMRGKYD----VPKWLS-- 234 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCC----CCTTCC--
T ss_pred C-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHcCCCC----CCCCCC--
Confidence 2 22344679999999999988775 899999999999999999999997533 33333333322211 111111
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
..+.+++.+||+.||++|||++|+++.
T Consensus 235 ---------~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 235 ---------PSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp ---------HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ---------HHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 345689999999999999999999864
No 40
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.3e-41 Score=370.32 Aligned_cols=263 Identities=25% Similarity=0.388 Sum_probs=207.2
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCc---chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSM---QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|+..+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 45789999999999999999995 4689999999865432 2235789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 90 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999997643 6899999999999999999999988 999999999999999999999999999865433
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
.. .......||+.|+|||++.+..++.++||||+|+++|||++|+.||................... ......+.
T Consensus 165 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 239 (294)
T 4eqm_A 165 SL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN----VTTDVRKD 239 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC----HHHHSCTT
T ss_pred cc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC----cchhcccC
Confidence 21 22334569999999999999999999999999999999999999997554333222222111110 00001111
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCC-CHHHHHHHHHHHHHhC
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRP-TMSEVVKAIETLLQND 905 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~ 905 (964)
....+.+++.+|++.||++|| +++++.+.|+.++...
T Consensus 240 -------~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 240 -------IPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp -------SCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred -------CCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 124567899999999999998 8999998888765433
No 41
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.2e-41 Score=375.83 Aligned_cols=248 Identities=22% Similarity=0.343 Sum_probs=205.4
Q ss_pred hhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
..++|...+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 356899999999999999999996 5799999999875432 3345688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++|+|.+++...+ .+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 93 ~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp ECCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 99999999999997643 5899999999999999999999988 999999999999999999999999999866433
Q ss_pred CCCceeecccccCcccCccccccCCCC-CchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLT-EKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
. ......||+.|+|||++.+..+. .++||||+||++|||++|+.||.... ..+........... .+..+
T Consensus 168 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~----~p~~~-- 237 (328)
T 3fe3_A 168 G---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-LKELRERVLRGKYR----IPFYM-- 237 (328)
T ss_dssp C---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCCC----CCTTS--
T ss_pred C---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCC----CCCCC--
Confidence 2 23456799999999999887765 79999999999999999999996533 22222222222111 11111
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
...+.+++.+||+.||.+|||++|+++
T Consensus 238 ---------s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 238 ---------STDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ---------CHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ---------CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 134568999999999999999999875
No 42
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.4e-41 Score=384.86 Aligned_cols=262 Identities=24% Similarity=0.404 Sum_probs=211.0
Q ss_pred hhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc-hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ-GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
..++|...+.||+|+||.||+|... +|+.||||+++..... ...+|.+|++++++++|||||++++++.+.+..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3567888999999999999999975 7899999998754332 3356889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++|+|.+++.... ..+++.++..++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 192 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp ECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 9999999999997542 45899999999999999999999988 9999999999999999999999999998654321
Q ss_pred CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
.........+++.|+|||++..+.++.++|||||||++|||+| |+.||..... ..+...+...... ...+.
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~~~--~~~~~---- 339 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--QQTREFVEKGGRL--PCPEL---- 339 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--HHHHHHHHTTCCC--CCCTT----
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCC--CCCCC----
Confidence 1111112235778999999998899999999999999999999 9999864332 1222222211100 01111
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
....+.+++.+||+.||++|||+.++++.|+.+.++.
T Consensus 340 -------~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 340 -------CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp -------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 1145678999999999999999999999999987653
No 43
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.7e-41 Score=362.78 Aligned_cols=257 Identities=32% Similarity=0.523 Sum_probs=211.4
Q ss_pred cCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEecc
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMA 706 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~ 706 (964)
++|...+.||+|+||+||+|...+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 57888899999999999999998899999999986543 34579999999999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCCce
Q 002121 707 NGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGHV 786 (964)
Q Consensus 707 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 786 (964)
+|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....... ..
T Consensus 89 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 163 (269)
T 4hcu_A 89 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TS 163 (269)
T ss_dssp TCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HS
T ss_pred CCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccccc-cc
Confidence 999999997653 46899999999999999999999988 99999999999999999999999999986543211 12
Q ss_pred eecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccCccchhh
Q 002121 787 STQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNT 865 (964)
Q Consensus 787 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 865 (964)
.....+|+.|+|||++....++.++||||+|+++|||++ |+.||..... .+.......... ...+..
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~-~~~~~~~~~~~~--------~~~~~~--- 231 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTGFR--------LYKPRL--- 231 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHHTTCC--------CCCCTT---
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH-HHHHHHHhcCcc--------CCCCCc---
Confidence 223457788999999998999999999999999999999 8999865332 222222211111 001110
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 866 VLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 866 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
....+.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 232 ---~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 232 ---ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 114467899999999999999999999999998753
No 44
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=7.2e-41 Score=380.02 Aligned_cols=262 Identities=27% Similarity=0.481 Sum_probs=200.8
Q ss_pred hcCCCccceeecCCcEEEEEEEec----CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS----DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
.++|+..+.||+|+||.||+|+.. ++..||||+++.... ...++|.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357889999999999999999864 577899999976433 344579999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
||||+++|+|.++++... ..+++.+++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 999999999999998653 46999999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCC-ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCccccccccccc
Q 002121 781 SSKG-HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 781 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
.... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... .+.. ..+..... .. .
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-~~~~-~~i~~~~~----~~--~ 271 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVI-KAVDEGYR----LP--P 271 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-HHHH-HHHHTTEE----CC--C
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-HHHH-HHHHcCCC----CC--C
Confidence 3221 11222346788999999999999999999999999999998 9999964332 1111 11211110 00 0
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCC
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDG 906 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 906 (964)
. ......+.+++.+||+.||++||++.||++.|+.+++..+
T Consensus 272 ~-------~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~ 312 (373)
T 2qol_A 272 P-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312 (373)
T ss_dssp C-------TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred C-------ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence 0 0112456789999999999999999999999999987643
No 45
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=378.27 Aligned_cols=263 Identities=24% Similarity=0.423 Sum_probs=214.6
Q ss_pred hcCCCccceeecCCcEEEEEEEec--------CCcEEEEEEecCCCcc-hhHHHHHHHHHHHhc-CCCCccceeEEEEee
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS--------DGQVVAIKRAQQGSMQ-GGLEFKTEIELLSRV-HHKNLVGLVGFCFEQ 695 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 695 (964)
.++|...+.||+|+||+||+|+.. .+..||||+++..... ...++.+|+++++++ +|||||++++++.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467888999999999999999852 2357999999765433 346789999999999 899999999999999
Q ss_pred CceEEEEEeccCCChhhhhcCCC--------------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE
Q 002121 696 GEQMLVYEFMANGTLRESLSGRS--------------GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL 761 (964)
Q Consensus 696 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 761 (964)
+..++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+.+ |+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEE
Confidence 99999999999999999997643 235899999999999999999999988 9999999999999
Q ss_pred CCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002121 762 DENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREV 840 (964)
Q Consensus 762 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 840 (964)
++++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||.... ..+..
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~-~~~~~ 303 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELF 303 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-HHHHH
Confidence 9999999999999987654433333445568899999999999999999999999999999999 999986432 22222
Q ss_pred HHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCC
Q 002121 841 RTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDG 906 (964)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 906 (964)
. .+....... .. .. ....+.+++.+||+.||++||++.||++.|+.++....
T Consensus 304 ~-~~~~~~~~~--~~----~~-------~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 304 K-LLKEGHRMD--KP----SN-------CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp H-HHHTTCCCC--CC----SS-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred H-HHHcCCCCC--CC----cc-------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 2 222111000 01 11 12456789999999999999999999999999987664
No 46
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.1e-41 Score=374.27 Aligned_cols=269 Identities=24% Similarity=0.409 Sum_probs=206.4
Q ss_pred hcCCCccceeecCCcEEEEEEEe-----cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEee--Cce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-----SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ--GEQ 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 698 (964)
.++|+..+.||+|+||+||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35788899999999999999984 36889999999876666667899999999999999999999999654 568
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 99999999999999997653 35899999999999999999999988 999999999999999999999999999876
Q ss_pred cCCCCC-ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccc---c-
Q 002121 779 SDSSKG-HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHY---G- 853 (964)
Q Consensus 779 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~- 853 (964)
...... .......+|..|+|||++.+..++.++||||||+++|||+||..|+....... ............ .
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF---MRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHH---HHHHCTTCCTHHHHHHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHH---HhhhcCccccchhHHHH
Confidence 543221 22233457888999999999999999999999999999999999985322110 000100000000 0
Q ss_pred ---cccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 854 ---LTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 854 ---~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
......... .......+.+++.+||+.||++|||+.|+++.|+.+.++
T Consensus 242 ~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 242 IELLKNNGRLPR---PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHTTCCCCC---CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHhccCcCCC---CcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 000000000 111224577899999999999999999999999998764
No 47
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=7.3e-41 Score=362.16 Aligned_cols=258 Identities=28% Similarity=0.446 Sum_probs=211.8
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEec
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFM 705 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 705 (964)
.++|+..+.||+|+||.||+|..+++..||||+++..... ..++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 4678889999999999999999988889999999765433 457899999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCCc
Q 002121 706 ANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGH 785 (964)
Q Consensus 706 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 785 (964)
++|+|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....... .
T Consensus 86 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~ 160 (268)
T 3sxs_A 86 SNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-V 160 (268)
T ss_dssp TTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-E
T ss_pred CCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhh-h
Confidence 9999999997542 35899999999999999999999988 99999999999999999999999999987654322 2
Q ss_pred eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccCccchh
Q 002121 786 VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRN 864 (964)
Q Consensus 786 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 864 (964)
......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ............ ..+..
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~--------~~~~~-- 229 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-EVVLKVSQGHRL--------YRPHL-- 229 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCC--------CCCTT--
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-HHHHHHHcCCCC--------CCCCc--
Confidence 2334456778999999998889999999999999999999 99999644322 222222111110 01111
Q ss_pred hhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 865 TVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 865 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
....+.+++.+||+.||++|||+.|+++.|+.+.++
T Consensus 230 ----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 230 ----ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp ----SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ----ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 113567899999999999999999999999887544
No 48
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.5e-40 Score=373.17 Aligned_cols=252 Identities=21% Similarity=0.309 Sum_probs=206.7
Q ss_pred hhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc------hhHHHHHHHHHHHhcCCCCccceeEEEEeeCc
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ------GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE 697 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 697 (964)
..+.|...+.||+|+||+||+|+.. +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3467899999999999999999965 6899999998764332 24578999999999999999999999999999
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC----cEEEeecc
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL----TAKVADFG 773 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~DFG 773 (964)
.++||||+++|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 999999999999999997643 6999999999999999999999988 99999999999998877 79999999
Q ss_pred cceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccc
Q 002121 774 LSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYG 853 (964)
Q Consensus 774 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 853 (964)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|..||.... ..+.+.........
T Consensus 165 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~-~~~~~~~i~~~~~~---- 236 (361)
T 2yab_A 165 LAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANITAVSYD---- 236 (361)
T ss_dssp SCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-HHHHHHHHHTTCCC----
T ss_pred CceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCC----
Confidence 998765432 2234579999999999999899999999999999999999999996432 22222222221110
Q ss_pred cccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 854 LTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
+++..... ....+.+++.+||..||++|||+.|+++
T Consensus 237 ----~~~~~~~~---~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 ----FDEEFFSQ---TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ----CCHHHHTT---SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----CCchhccC---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111111 1234668999999999999999999874
No 49
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.3e-40 Score=367.75 Aligned_cols=262 Identities=28% Similarity=0.453 Sum_probs=203.4
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
.++|...+.||+|+||+||+|... ..+|+|+++.... .....+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 468889999999999999999874 3689998875433 23457899999999999999999999875 566899999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 783 (964)
|+++|+|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.......
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred cCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999997543 46999999999999999999999988 99999999999999999999999999986543333
Q ss_pred CceeecccccCcccCccccc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 784 GHVSTQVKGTMGYLDPEYYM---TQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
........||+.|+|||++. ...++.++|||||||++|||++|+.||.......... ....... ..+
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-~~~~~~~---------~~~ 257 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII-FMVGRGY---------ASP 257 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH-HHHHHTC---------CCC
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHH-HHHhcCC---------CCc
Confidence 33344567999999999986 5678899999999999999999999997543322222 2211111 011
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
.+..........+.+++.+||+.+|++||++.|+++.|+.+...
T Consensus 258 ~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp CSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred chhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 11111111124567899999999999999999999999987643
No 50
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8.8e-41 Score=371.92 Aligned_cols=253 Identities=24% Similarity=0.376 Sum_probs=204.0
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
.++|+..+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 367899999999999999999965 789999999865433 234568999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 783 (964)
|+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 86 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 86 YCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp CCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 999999999997653 6899999999999999999999988 99999999999999999999999999987654332
Q ss_pred CceeecccccCcccCccccccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccc
Q 002121 784 GHVSTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTI 862 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (964)
........||+.|+|||++.+..+ +.++|||||||++|||++|+.||................... ..+ .
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--------~~~-~ 231 (323)
T 3tki_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--------LNP-W 231 (323)
T ss_dssp ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT--------STT-G
T ss_pred ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc--------CCc-c
Confidence 233345679999999999987765 789999999999999999999997544332222222211110 000 0
Q ss_pred hhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 863 RNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 863 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
......+.+++.+||+.||++|||+.|+++
T Consensus 232 ----~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 232 ----KKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp ----GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----ccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 111244568999999999999999999975
No 51
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2e-40 Score=370.50 Aligned_cols=247 Identities=23% Similarity=0.282 Sum_probs=203.9
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
++|+..+.||+|+||+||+|+.. +|+.||+|+++... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888999999999999999965 68999999987532 223456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 85 EYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp ECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999997543 5899999999999999999999988 9999999999999999999999999998643222
Q ss_pred CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTI 862 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (964)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ............. ....+
T Consensus 160 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~~~~~----~p~~~---- 228 (337)
T 1o6l_A 160 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILMEEIR----FPRTL---- 228 (337)
T ss_dssp --CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCCC----CCTTS----
T ss_pred --CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-HHHHHHHHcCCCC----CCCCC----
Confidence 223456799999999999999999999999999999999999999965332 2222222221110 11111
Q ss_pred hhhhHHHHHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q 002121 863 RNTVLLGFRRYLELALQCVEESATDRP-----TMSEVVK 896 (964)
Q Consensus 863 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 896 (964)
...+.+++.+||+.||++|| +++|+++
T Consensus 229 -------s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 229 -------SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -------CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -------CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 13456899999999999999 8999875
No 52
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.6e-40 Score=364.06 Aligned_cols=257 Identities=28% Similarity=0.416 Sum_probs=202.6
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHh--cCCCCccceeEEEEee----CceE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSR--VHHKNLVGLVGFCFEQ----GEQM 699 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~----~~~~ 699 (964)
.++|+..+.||+|+||+||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++.+. ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46899999999999999999998 6899999998643 33456677777776 7999999999997653 4579
Q ss_pred EEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHh--------hcCCCCeeccCCCCCcEEECCCCcEEEee
Q 002121 700 LVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLH--------ELANPPIIHRDVKSTNILLDENLTAKVAD 771 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 771 (964)
+||||+++|+|.++++.. .+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|
T Consensus 83 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECC
T ss_pred EehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEee
Confidence 999999999999999653 5999999999999999999999 666 99999999999999999999999
Q ss_pred cccceeecCCCCCc--eeecccccCcccCccccccC------CCCCchhHHHHHHHHHHHHhC----------CCCCCCC
Q 002121 772 FGLSKLVSDSSKGH--VSTQVKGTMGYLDPEYYMTQ------QLTEKSDVYSFGVVMLELITA----------KQPIEKG 833 (964)
Q Consensus 772 FGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~S~Gvvl~elltg----------~~p~~~~ 833 (964)
||+++......... ......||+.|+|||++.+. .++.++|||||||++|||+|| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 99998765443211 12234799999999999876 455799999999999999999 7887532
Q ss_pred ---chhHHHHHHHhccCcccccccccccCccchh--hhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 002121 834 ---KYVVREVRTAMNRDDEEHYGLTEMMDPTIRN--TVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETL 901 (964)
Q Consensus 834 ---~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 901 (964)
......+........ ..+.+.. ........+.+++.+||+.||++|||+.||++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 237 VPNDPSFEDMRKVVCVDQ---------QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCSSCCHHHHHHHHTTSC---------CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCcchhhhhHHHhccC---------CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 122222322222111 1111111 1223446788999999999999999999999999875
No 53
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.4e-41 Score=365.68 Aligned_cols=260 Identities=27% Similarity=0.423 Sum_probs=210.5
Q ss_pred hhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEe
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
..++|...+.||+|+||+||+|...++..||||+++..... ..++.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 35678889999999999999999988889999999865433 46799999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKG 784 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 784 (964)
+++|+|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 101 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~ 175 (283)
T 3gen_A 101 MANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-Y 175 (283)
T ss_dssp CTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-H
T ss_pred cCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccc-c
Confidence 99999999997632 35999999999999999999999988 9999999999999999999999999998654321 1
Q ss_pred ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccCccch
Q 002121 785 HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIR 863 (964)
Q Consensus 785 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (964)
.......+|+.|+|||++....++.++||||||+++|||+| |+.||...... +............ .....
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~---~~~~~----- 246 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQGLRLY---RPHLA----- 246 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCCC---CCTTC-----
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-HHHHHHhcccCCC---CCCcC-----
Confidence 11223456788999999998899999999999999999998 99999754322 2222221111100 01111
Q ss_pred hhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 864 NTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 864 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
...+.+++.+||+.||++||++.|+++.|++++.++
T Consensus 247 ------~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 247 ------SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp ------CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ------CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 145678999999999999999999999999998765
No 54
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=368.57 Aligned_cols=252 Identities=18% Similarity=0.273 Sum_probs=207.4
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEe
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
.++|...+.||+|+||+||+|... +|+.||+|++.... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468899999999999999999965 68899999987543 3445688999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC--CCcEEEeecccceeecCCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE--NLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~--~~~~kl~DFGla~~~~~~~ 782 (964)
+++|+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 83 ~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~- 157 (321)
T 1tki_A 83 ISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG- 157 (321)
T ss_dssp CCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-
Confidence 99999999997643 46899999999999999999999988 999999999999987 789999999999877543
Q ss_pred CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTI 862 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (964)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.+......... .+...
T Consensus 158 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~--------~~~~~ 226 (321)
T 1tki_A 158 --DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENIMNAEYT--------FDEEA 226 (321)
T ss_dssp --CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCC--------CCHHH
T ss_pred --CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-HHHHHHHHcCCCC--------CChhh
Confidence 233456799999999999988899999999999999999999999965332 2222222222111 01111
Q ss_pred hhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 863 RNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 863 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
. ......+.+++.+||+.||++|||+.|+++.
T Consensus 227 ~---~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 227 F---KEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp H---TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred h---ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 1112456789999999999999999999873
No 55
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=7.7e-41 Score=375.69 Aligned_cols=266 Identities=26% Similarity=0.404 Sum_probs=213.8
Q ss_pred HHHHhhcCCCccceeecCCcEEEEEEEec------CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEE
Q 002121 621 ELKKCSNNFSESNEIGSGGYGKVYRGMLS------DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCF 693 (964)
Q Consensus 621 el~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 693 (964)
++....++|...+.||+|+||.||+|+.. +++.||||+++.... .....+.+|++++++++||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 44455789999999999999999999974 348999999986543 23457899999999999999999999999
Q ss_pred eeCceEEEEEeccCCChhhhhcCCC----------------------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeec
Q 002121 694 EQGEQMLVYEFMANGTLRESLSGRS----------------------GIHLDWKRRLRIALGSARGLAYLHELANPPIIH 751 (964)
Q Consensus 694 ~~~~~~lV~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 751 (964)
+.+..++||||+++|+|.+++.... ...+++.+++.++.||++||+|||+.+ |+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eec
Confidence 9999999999999999999997542 146899999999999999999999988 999
Q ss_pred cCCCCCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCC
Q 002121 752 RDVKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPI 830 (964)
Q Consensus 752 ~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~ 830 (964)
|||||+|||+++++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+| |+.||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999987644332223344568999999999998899999999999999999999 99999
Q ss_pred CCCchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 831 EKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
..... .+.......... . ..... ....+.+++.+||+.||++||++.|+++.|+++.++
T Consensus 278 ~~~~~-~~~~~~~~~~~~------~-~~~~~-------~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 278 YGMAH-EEVIYYVRDGNI------L-ACPEN-------CPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp TTSCH-HHHHHHHHTTCC------C-CCCTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred CCCCh-HHHHHHHhCCCc------C-CCCCC-------CCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 64332 222222211111 0 00111 114567899999999999999999999999987643
No 56
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1e-40 Score=371.55 Aligned_cols=269 Identities=24% Similarity=0.364 Sum_probs=196.7
Q ss_pred HHhhcCCCccceeecCCcEEEEEEEecC-C---cEEEEEEecCC--CcchhHHHHHHHHHHHhcCCCCccceeEEEEeeC
Q 002121 623 KKCSNNFSESNEIGSGGYGKVYRGMLSD-G---QVVAIKRAQQG--SMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQG 696 (964)
Q Consensus 623 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~-g---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 696 (964)
....++|...+.||+|+||+||+|+... + ..||||+++.. .....+++.+|++++++++||||+++++++...+
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3445689999999999999999999653 3 27999998764 2334567999999999999999999999998766
Q ss_pred ce------EEEEEeccCCChhhhhcCCC----CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc
Q 002121 697 EQ------MLVYEFMANGTLRESLSGRS----GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT 766 (964)
Q Consensus 697 ~~------~lV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~ 766 (964)
.. ++||||+++|+|.+++.... ...+++.+++.++.|+++||+|||+.+ |+||||||+|||+++++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCC
Confidence 55 99999999999999985422 235899999999999999999999988 999999999999999999
Q ss_pred EEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhc
Q 002121 767 AKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMN 845 (964)
Q Consensus 767 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 845 (964)
+||+|||+++...............+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... +.......
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-~~~~~~~~ 254 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA-EIYNYLIG 254 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHHT
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH-HHHHHHhc
Confidence 99999999987654433333344567889999999999999999999999999999999 89998643321 11121111
Q ss_pred cCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCCCCC
Q 002121 846 RDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDGMNT 909 (964)
Q Consensus 846 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 909 (964)
.... ...+. ....+.+++.+||+.||++|||+.|+++.|+++++......
T Consensus 255 ~~~~-------~~~~~-------~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 255 GNRL-------KQPPE-------CMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp TCCC-------CCCTT-------CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred CCCC-------CCCCc-------cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 1110 00111 12456799999999999999999999999999998765443
No 57
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.4e-40 Score=366.52 Aligned_cols=264 Identities=24% Similarity=0.405 Sum_probs=215.7
Q ss_pred hhcCCCccceeecCCcEEEEEEEe------cCCcEEEEEEecCCCc-chhHHHHHHHHHHHhc-CCCCccceeEEEEeeC
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGML------SDGQVVAIKRAQQGSM-QGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQG 696 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 696 (964)
..++|...+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++.+.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 356788999999999999999985 3467999999986543 3346789999999999 9999999999999999
Q ss_pred ceEEEEEeccCCChhhhhcCCCC----------------CccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEE
Q 002121 697 EQMLVYEFMANGTLRESLSGRSG----------------IHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNIL 760 (964)
Q Consensus 697 ~~~lV~E~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NIL 760 (964)
..++||||+++|+|.+++..... ..+++.+++.++.|+++||+|||+.+ |+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEE
Confidence 99999999999999999976432 24899999999999999999999988 999999999999
Q ss_pred ECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHH
Q 002121 761 LDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVRE 839 (964)
Q Consensus 761 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~ 839 (964)
++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||+| |+.||.........
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 257 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence 99999999999999987765544333445567889999999999999999999999999999999 99998653322221
Q ss_pred HHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 840 VRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
. ........ ....... ...+.+++.+||+.||++||++.|+++.|++++++.
T Consensus 258 ~-~~~~~~~~------~~~~~~~-------~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 258 Y-KMIKEGFR------MLSPEHA-------PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp H-HHHHHTCC------CCCCTTS-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred H-HHhccCCC------CCCcccC-------CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 1 11111110 0001111 145678999999999999999999999999998764
No 58
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.2e-40 Score=367.10 Aligned_cols=263 Identities=25% Similarity=0.411 Sum_probs=213.0
Q ss_pred hhcCCCccceeecCCcEEEEEEEe------cCCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCc
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGML------SDGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE 697 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 697 (964)
..++|...+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 356788899999999999999985 2458899999975433 334578999999999999999999999999999
Q ss_pred eEEEEEeccCCChhhhhcCCCC----------------------CccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCC
Q 002121 698 QMLVYEFMANGTLRESLSGRSG----------------------IHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVK 755 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk 755 (964)
.++||||+++|+|.+++..... ..+++.+++.++.|+++||+|||+.+ |+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccc
Confidence 9999999999999999975432 34899999999999999999999988 9999999
Q ss_pred CCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCc
Q 002121 756 STNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGK 834 (964)
Q Consensus 756 ~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~ 834 (964)
|+||++++++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999987754433223334567889999999998899999999999999999999 999996432
Q ss_pred hhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 835 YVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
.. . +...+..... ...... ....+.+++.+||+.||++||++.|+++.|++++.+.
T Consensus 258 ~~-~-~~~~~~~~~~------~~~~~~-------~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 313 (314)
T 2ivs_A 258 PE-R-LFNLLKTGHR------MERPDN-------CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313 (314)
T ss_dssp GG-G-HHHHHHTTCC------CCCCTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred HH-H-HHHHhhcCCc------CCCCcc-------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhhc
Confidence 21 1 1111111110 000111 1245678999999999999999999999999988653
No 59
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.5e-41 Score=378.84 Aligned_cols=262 Identities=25% Similarity=0.386 Sum_probs=210.5
Q ss_pred hcCCCccceeecCCcEEEEEEEec------CCcEEEEEEecCCC-cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS------DGQVVAIKRAQQGS-MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQ 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 698 (964)
.++|...+.||+|+||+||+|++. +++.||||+++... .....++.+|+.++++++|||||++++++.+.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 357888999999999999999953 46789999997543 33445788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCC-----CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC---cEEEe
Q 002121 699 MLVYEFMANGTLRESLSGRS-----GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL---TAKVA 770 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~ 770 (964)
++||||+++|+|.+++.... ...+++.+++.++.||++||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997532 235899999999999999999999988 99999999999999555 59999
Q ss_pred ecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcc
Q 002121 771 DFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDE 849 (964)
Q Consensus 771 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 849 (964)
|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||..... .+...........
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-~~~~~~i~~~~~~ 305 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRM 305 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCCC
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCC
Confidence 9999986543322233344568999999999999999999999999999999998 9999965332 2222222211110
Q ss_pred cccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 850 EHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 850 ~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
. . ... ....+.+++.+||+.||++||++.||++.|+.+.+..
T Consensus 306 ~---~----~~~-------~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 306 D---P----PKN-------CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp C---C----CTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred C---C----Ccc-------CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 0 0 011 1134678999999999999999999999999887654
No 60
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-40 Score=369.68 Aligned_cols=291 Identities=26% Similarity=0.464 Sum_probs=214.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCC--CCCCCCCCCC-CCCccEEecC----CCeeEEEcCCCCccc--cccCCcCCCCcccEE
Q 002121 23 ATDSRDAAALQSLKDAWQNTP--PTWKNSDDPC-GSWEGVTCNN----SRVTALGLSTMGLTG--KLSGDIGGLTELRSL 93 (964)
Q Consensus 23 ~~~~~~~~aL~~~k~~~~~~~--~~W~~~~~~C-~~w~gv~C~~----~~v~~L~L~~~~l~g--~~~~~l~~l~~L~~L 93 (964)
.|+++|++||++||+++.+.. .+|..+++|| |.|.||.|+. ++|+.|+|++++++| .+|..|+++++|++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 588999999999999996533 6898777777 2399999985 789999999999999 899999999999999
Q ss_pred eccc-CCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccc
Q 002121 94 DLSY-NGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQ 172 (964)
Q Consensus 94 ~L~~-N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 172 (964)
+|++ | .+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|.+++.+|..|.++++|++|+|++|+
T Consensus 82 ~L~~~n-~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 82 YIGGIN-NLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEET-TEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eCCCCC-cccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 9995 7 7888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcC
Q 002121 173 LTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNAL 252 (964)
Q Consensus 173 l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 252 (964)
++|.+|. .+..++ ..|++|++++|++++.+|..+..++ |+.|+|++|.+
T Consensus 161 l~~~~p~------~l~~l~------------------------~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 161 ISGAIPD------SYGSFS------------------------KLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp CEEECCG------GGGCCC------------------------TTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred ccCcCCH------HHhhhh------------------------hcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 8766662 233333 2344445555555556666666665 88888888888
Q ss_pred ccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhc
Q 002121 253 TGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKL 332 (964)
Q Consensus 253 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 332 (964)
++.+|..|..+++|+.|+|++|.+++.++.+..+++|++|+|++|++ ++.+|..|
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l-------------------------~~~~p~~l 264 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRI-------------------------YGTLPQGL 264 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCC-------------------------EECCCGGG
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcc-------------------------cCcCChHH
Confidence 77777777777777777777777776655554445555555554444 44555555
Q ss_pred cCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCc
Q 002121 333 FSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQ 371 (964)
Q Consensus 333 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 371 (964)
..+++|+.|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred hcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 55555555555555555555543 555666666666665
No 61
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.7e-40 Score=365.95 Aligned_cols=251 Identities=20% Similarity=0.307 Sum_probs=204.9
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc------hhHHHHHHHHHHHhcCCCCccceeEEEEeeCce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ------GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQ 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 698 (964)
.+.|...+.||+|+||.||+|... +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356888999999999999999965 6899999998754322 346799999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC----cEEEeeccc
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL----TAKVADFGL 774 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~DFGl 774 (964)
++||||+++|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 9999999999999999754 36999999999999999999999988 99999999999999887 899999999
Q ss_pred ceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccc
Q 002121 775 SKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGL 854 (964)
Q Consensus 775 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (964)
++....... .....||+.|+|||++....++.++|||||||++|||++|+.||..... .+.+.........
T Consensus 165 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~~~~~~~~----- 235 (326)
T 2y0a_A 165 AHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNYE----- 235 (326)
T ss_dssp CEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHHTCCC-----
T ss_pred CeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-HHHHHHHHhcCCC-----
Confidence 987653322 2345699999999999989999999999999999999999999964332 2222221111110
Q ss_pred ccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 855 TEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 855 ~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
...... ......+.+++.+||+.||++|||+.|+++
T Consensus 236 ---~~~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 ---FEDEYF---SNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp ---CCHHHH---TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---cCcccc---ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 011111 111244668999999999999999999986
No 62
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-40 Score=371.04 Aligned_cols=266 Identities=21% Similarity=0.350 Sum_probs=212.2
Q ss_pred HHhhcCCCccceeecCCcEEEEEEEe------cCCcEEEEEEecCCC-cchhHHHHHHHHHHHhc-CCCCccceeEEEEe
Q 002121 623 KKCSNNFSESNEIGSGGYGKVYRGML------SDGQVVAIKRAQQGS-MQGGLEFKTEIELLSRV-HHKNLVGLVGFCFE 694 (964)
Q Consensus 623 ~~~~~~~~~~~~lG~G~fg~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~ 694 (964)
+...++|...+.||+|+||.||+|.. .+++.||||+++... ......+.+|+++++++ +||||+++++++.+
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 33457889999999999999999996 245689999997543 23446799999999999 89999999999999
Q ss_pred eCceEEEEEeccCCChhhhhcCCCC---------------------CccchHHHHHHHHHHHHHHHHHhhcCCCCeeccC
Q 002121 695 QGEQMLVYEFMANGTLRESLSGRSG---------------------IHLDWKRRLRIALGSARGLAYLHELANPPIIHRD 753 (964)
Q Consensus 695 ~~~~~lV~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 753 (964)
.+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCC
Confidence 9999999999999999999976542 23799999999999999999999988 99999
Q ss_pred CCCCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCC
Q 002121 754 VKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEK 832 (964)
Q Consensus 754 lk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~ 832 (964)
|||+|||++.++.+||+|||+++...............||+.|+|||++.++.++.++|||||||++|||+| |+.||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 999999999999999999999987765544344455668899999999999999999999999999999998 9999965
Q ss_pred CchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 833 GKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
...... +...+..... ...... ....+.+++.+||+.||++||++.|+++.|+.+....
T Consensus 278 ~~~~~~-~~~~~~~~~~------~~~~~~-------~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 278 IPVDAN-FYKLIQNGFK------MDQPFY-------ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CCCSHH-HHHHHHTTCC------CCCCTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred CCcHHH-HHHHHhcCCC------CCCCCC-------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 432222 1122211110 000111 1245678999999999999999999999999886543
No 63
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.2e-40 Score=364.54 Aligned_cols=255 Identities=22% Similarity=0.361 Sum_probs=205.4
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CC-------cEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCc
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DG-------QVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE 697 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 697 (964)
.++|...+.||+|+||+||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 357888999999999999999854 33 4799999976665666789999999999999999999999999999
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc--------EEE
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT--------AKV 769 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~--------~kl 769 (964)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++. +||
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeee
Confidence 999999999999999997653 34899999999999999999999988 999999999999998887 999
Q ss_pred eecccceeecCCCCCceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCc
Q 002121 770 ADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDD 848 (964)
Q Consensus 770 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 848 (964)
+|||+++.... .....||+.|+|||++.+ ..++.++|||||||++|||++|..|+..................
T Consensus 163 ~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (289)
T 4fvq_A 163 SDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQ 236 (289)
T ss_dssp CCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC
T ss_pred ccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCC
Confidence 99999865422 123468999999999987 77899999999999999999966555443333222222111111
Q ss_pred ccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCC
Q 002121 849 EEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDG 906 (964)
Q Consensus 849 ~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 906 (964)
.....+ ..+.+++.+||+.||++|||+.|+++.|++++...+
T Consensus 237 -----~~~~~~-----------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 237 -----LPAPKA-----------AELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp -----CCCCSS-----------CTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred -----CCCCCC-----------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 111111 234589999999999999999999999998876554
No 64
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.1e-40 Score=367.90 Aligned_cols=265 Identities=17% Similarity=0.237 Sum_probs=213.4
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
.++|...+.||+|+||+||+|+. .+|+.||||++..... ...+.+|+++++++ +||||+++++++.+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 35788999999999999999995 5789999999875432 24688999999999 99999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc-----EEEeecccceee
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT-----AKVADFGLSKLV 778 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~-----~kl~DFGla~~~ 778 (964)
|+ +|+|.+++... ...+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++..
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 86 LL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred eC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99 99999999864 246999999999999999999999988 999999999999999887 999999999876
Q ss_pred cCCCCCc-----eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCC--chhHHHHHHHhccCcccc
Q 002121 779 SDSSKGH-----VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKG--KYVVREVRTAMNRDDEEH 851 (964)
Q Consensus 779 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~ 851 (964)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||... ....+.+.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~-- 238 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA-- 238 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH--
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc--
Confidence 5433211 123567999999999999999999999999999999999999999742 2222222221111000
Q ss_pred cccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCCCC
Q 002121 852 YGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDGMN 908 (964)
Q Consensus 852 ~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 908 (964)
.... ........+.+++.+||+.||.+||++.++.+.|+.+.++.+..
T Consensus 239 ------~~~~---~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~ 286 (330)
T 2izr_A 239 ------TPIE---VLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYM 286 (330)
T ss_dssp ------SCHH---HHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred ------CCHH---HHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 0000 00001126779999999999999999999999999999876543
No 65
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.7e-40 Score=368.84 Aligned_cols=259 Identities=24% Similarity=0.442 Sum_probs=201.3
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCc----EEEEEEecCCC-cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQ----VVAIKRAQQGS-MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQM 699 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 699 (964)
.++|+..+.||+|+||+||+|+.. +|+ +||+|.+.... .....++.+|+.++++++||||++++++|.+. ..+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeE
Confidence 356888999999999999999953 444 46888876433 23456799999999999999999999999875 478
Q ss_pred EEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeec
Q 002121 700 LVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVS 779 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 779 (964)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 9999999999999997653 46899999999999999999999988 9999999999999999999999999998776
Q ss_pred CCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCccccccccccc
Q 002121 780 DSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 780 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
............||+.|+|||++.+..++.++|||||||++|||+| |+.||....... +...+..... . ..
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~~~----~--~~ 240 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGER----L--PQ 240 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCC----C--CC
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHHHHcCCC----C--CC
Confidence 5444333445567889999999999999999999999999999999 999996432211 1111111110 0 00
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
.+. ....+.+++.+||+.||++||++.|+++.|+.+.+.
T Consensus 241 ~~~-------~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 241 PPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CTT-------BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred Ccc-------CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 011 124567899999999999999999999999988753
No 66
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=8.9e-40 Score=361.93 Aligned_cols=265 Identities=23% Similarity=0.350 Sum_probs=203.5
Q ss_pred hhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
..++|+..+.||+|+||+||+|+..+|+.||||++...... ....+.+|++++++++||||+++++++.+.+..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 35789999999999999999999988999999998754322 2357889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++ +|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 99 e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 173 (311)
T 3niz_A 99 EFMEK-DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173 (311)
T ss_dssp ECCSE-EHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred cCCCC-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence 99985 8888887643 45899999999999999999999988 9999999999999999999999999998764332
Q ss_pred CCceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCc--hhHHHHHHHhccCcccccc-cc---
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGK--YVVREVRTAMNRDDEEHYG-LT--- 855 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~-~~--- 855 (964)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... .....+............. ..
T Consensus 174 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 174 --RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp --C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred --ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccc
Confidence 22334568999999999876 568999999999999999999999996322 2222332222221111000 00
Q ss_pred -------cccCcc-chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 856 -------EMMDPT-IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 856 -------~~~d~~-l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
...... ..........++.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000000 00011112245779999999999999999999985
No 67
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.6e-40 Score=356.43 Aligned_cols=253 Identities=29% Similarity=0.489 Sum_probs=196.2
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcc----hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQ----GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|+..+.||+|+||.||+|... |+.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357888999999999999999985 899999998754322 235789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC--------CCcEEEeecc
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE--------NLTAKVADFG 773 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~--------~~~~kl~DFG 773 (964)
|||+++|+|.+++... .+++..+..++.|+++||+|||+.+..+|+||||||+||+++. ++.+||+|||
T Consensus 85 ~e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 9999999999999643 5899999999999999999999987566999999999999986 7789999999
Q ss_pred cceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccc
Q 002121 774 LSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYG 853 (964)
Q Consensus 774 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 853 (964)
+++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||............ .....
T Consensus 162 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-~~~~~----- 231 (271)
T 3dtc_A 162 LAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV-AMNKL----- 231 (271)
T ss_dssp C-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH-HTSCC-----
T ss_pred ccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhh-hcCCC-----
Confidence 998654332 22356999999999999999999999999999999999999999754432222111 11111
Q ss_pred cccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q 002121 854 LTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIET 900 (964)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 900 (964)
....... ....+.+++.+||+.||++|||+.|+++.|++
T Consensus 232 -~~~~~~~-------~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 232 -ALPIPST-------CPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp -CCCCCTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred -CCCCCcc-------cCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 0001111 11456789999999999999999999999875
No 68
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.7e-40 Score=372.52 Aligned_cols=252 Identities=20% Similarity=0.336 Sum_probs=207.6
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEe
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
.++|...+.||+|+||+||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999999999964 6899999999876555566799999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC--CCcEEEeecccceeecCCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE--NLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~--~~~~kl~DFGla~~~~~~~ 782 (964)
+++|+|.+++.... ..+++.++..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 130 LSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 99999999997543 46899999999999999999999988 999999999999974 5789999999998765432
Q ss_pred CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTI 862 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (964)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.+......... .++..
T Consensus 206 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-~~~~~~i~~~~~~--------~~~~~ 273 (387)
T 1kob_A 206 ---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-LETLQNVKRCDWE--------FDEDA 273 (387)
T ss_dssp ---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHHCCCC--------CCSST
T ss_pred ---ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCC--------CCccc
Confidence 23345799999999999999999999999999999999999999975432 2222222222111 01111
Q ss_pred hhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 863 RNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 863 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
... ....+.+++.+||+.||++|||+.|+++
T Consensus 274 ~~~---~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 274 FSS---VSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp TTT---SCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccc---CCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 111 1145668999999999999999999975
No 69
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.8e-40 Score=361.94 Aligned_cols=260 Identities=29% Similarity=0.500 Sum_probs=196.0
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
.++|+..+.||+|+||+||+|+.. ..||||+++.... ...+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467899999999999999999874 3599999875443 2345789999999999999999999965 4567899999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 783 (964)
|+++++|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 100 WCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp CCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred ecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccc
Confidence 999999999997543 46999999999999999999999988 99999999999999999999999999986654333
Q ss_pred CceeecccccCcccCccccc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 784 GHVSTQVKGTMGYLDPEYYM---TQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
........||+.|+|||++. ...++.++||||||+++|||++|+.||............ ..... ..+
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~---------~~~ 245 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM-VGRGS---------LSP 245 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHH-HHHTS---------CCC
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHH-hcccc---------cCc
Confidence 33344567999999999986 567889999999999999999999999754433222222 21111 011
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLL 902 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 902 (964)
.+..........+.+++.+||+.||++||++.|+++.|+++.
T Consensus 246 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 246 DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred chhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 111111112245779999999999999999999999999864
No 70
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.5e-40 Score=366.69 Aligned_cols=258 Identities=23% Similarity=0.399 Sum_probs=204.3
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCc----EEEEEEecCCC-cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQ----VVAIKRAQQGS-MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
++|...+.||+|+||+||+|+.. +|+ +||+|++.... ......+.+|+.++++++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57888899999999999999964 454 38888876433 233356789999999999999999999986 567899
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 92 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999998653 46899999999999999999999988 99999999999999999999999999998765
Q ss_pred CCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccC
Q 002121 781 SSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 781 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
...........||+.|+|||++.++.++.++|||||||++|||+| |+.||....... +...+..... ........
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~--~~~~~~~~ 243 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDLLEKGER--LAQPQICT 243 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHHHHTTCB--CCCCTTBC
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHHHHcCCC--CCCCCcCc
Confidence 544344455678899999999999999999999999999999999 999997433211 1111111110 00111122
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
..+.+++.+||+.||++||++.|+++.|+.+.+.
T Consensus 244 -----------~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 244 -----------IDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp -----------TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred -----------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 2345899999999999999999999999988643
No 71
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4e-40 Score=365.30 Aligned_cols=272 Identities=25% Similarity=0.417 Sum_probs=219.6
Q ss_pred ccHHHHHHhhcCCCccceeecCCcEEEEEEEe------cCCcEEEEEEecCCCcc-hhHHHHHHHHHHHhc-CCCCccce
Q 002121 617 FSYDELKKCSNNFSESNEIGSGGYGKVYRGML------SDGQVVAIKRAQQGSMQ-GGLEFKTEIELLSRV-HHKNLVGL 688 (964)
Q Consensus 617 ~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~------~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~nIv~l 688 (964)
+...++....++|...+.||+|+||+||+|.. .+++.||||+++..... ....+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 45566667778999999999999999999984 34689999999765433 345789999999999 79999999
Q ss_pred eEEEEeeC-ceEEEEEeccCCChhhhhcCCCC--------------CccchHHHHHHHHHHHHHHHHHhhcCCCCeeccC
Q 002121 689 VGFCFEQG-EQMLVYEFMANGTLRESLSGRSG--------------IHLDWKRRLRIALGSARGLAYLHELANPPIIHRD 753 (964)
Q Consensus 689 ~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 753 (964)
++++.+.+ ..++||||+++|+|.+++..... ..+++.+++.++.|+++||+|||+.+ |+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---ccccc
Confidence 99998754 48999999999999999986542 12899999999999999999999988 99999
Q ss_pred CCCCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCC
Q 002121 754 VKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEK 832 (964)
Q Consensus 754 lk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~ 832 (964)
|||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987655443334445668999999999999999999999999999999998 9999965
Q ss_pred CchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 833 GKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
................. ...... ...+.+++.+||+.||++||++.|+++.|+.+++..
T Consensus 254 ~~~~~~~~~~~~~~~~~---~~~~~~-----------~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 254 VKIDEEFCRRLKEGTRM---RAPDYT-----------TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCCSHHHHHHHHHTCCC---CCCTTC-----------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHhccCccC---CCCCCC-----------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 43222222221111110 011111 134678999999999999999999999999998754
No 72
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.6e-39 Score=357.29 Aligned_cols=264 Identities=17% Similarity=0.229 Sum_probs=212.4
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
.++|...+.||+|+||+||+|+. .+|+.||||++..... ...+.+|+++++++ +|+|++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 45789999999999999999995 5789999999865432 34688999999999 79999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc-----EEEeecccceee
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT-----AKVADFGLSKLV 778 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~-----~kl~DFGla~~~ 778 (964)
|+ +|+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++..
T Consensus 87 ~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 87 LL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred ec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99 999999998643 35999999999999999999999988 999999999999987776 999999999877
Q ss_pred cCCCCC-----ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc--hhHHHHHHHhccCcccc
Q 002121 779 SDSSKG-----HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGK--YVVREVRTAMNRDDEEH 851 (964)
Q Consensus 779 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~ 851 (964)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .....+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-- 239 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS-- 239 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH--
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC--
Confidence 543221 12345679999999999999999999999999999999999999997532 111111111111000
Q ss_pred cccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCC
Q 002121 852 YGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDG 906 (964)
Q Consensus 852 ~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 906 (964)
.............+.+++.+||+.||++||++++|++.|+++.++.+
T Consensus 240 --------~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 240 --------TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp --------SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --------ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 00000011112457799999999999999999999999999987764
No 73
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4.3e-40 Score=372.07 Aligned_cols=253 Identities=24% Similarity=0.338 Sum_probs=205.2
Q ss_pred HhhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEE
Q 002121 624 KCSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 624 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
...++|...+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++|||||++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34568999999999999999999964 689999999976443 234568899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC---cEEEeeccccee
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL---TAKVADFGLSKL 777 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~DFGla~~ 777 (964)
||||+++|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||+++.
T Consensus 106 v~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp EECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 999999999999997653 6899999999999999999999988 99999999999998654 599999999987
Q ss_pred ecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccc
Q 002121 778 VSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEM 857 (964)
Q Consensus 778 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (964)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+........... .
T Consensus 181 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-~~~~~~i~~~~~~----~--- 249 (362)
T 2bdw_A 181 VNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKAGAYD----Y--- 249 (362)
T ss_dssp CTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCCC----C---
T ss_pred ecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhCCCC----C---
Confidence 65432 22346799999999999998999999999999999999999999965432 2222222211110 0
Q ss_pred cCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 858 MDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 858 ~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..+. .. .....+.+++.+||+.||++||++.|+++
T Consensus 250 ~~~~-~~---~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 250 PSPE-WD---TVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp CTTG-GG---GSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred Cccc-cc---CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0001 11 11244668999999999999999999875
No 74
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.5e-40 Score=369.55 Aligned_cols=251 Identities=25% Similarity=0.325 Sum_probs=191.1
Q ss_pred hhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
..++|...+.||+|+||+||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4568999999999999999999975 58899999997543 33568899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC---CCcEEEeecccceeecC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE---NLTAKVADFGLSKLVSD 780 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DFGla~~~~~ 780 (964)
|+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++....
T Consensus 129 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred eCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 999999999997653 5899999999999999999999988 999999999999975 89999999999987643
Q ss_pred CCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 781 SSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 781 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||................... . ..+
T Consensus 204 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~----~---~~~ 273 (349)
T 2w4o_A 204 Q---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY----F---ISP 273 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCC----C---CTT
T ss_pred c---cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCc----c---CCc
Confidence 2 12334579999999999999899999999999999999999999997544333233333222111 0 000
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
... .....+.+++.+||+.||++|||+.|+++
T Consensus 274 -~~~---~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 274 -WWD---EVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -TTT---TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -hhh---hCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011 11245678999999999999999999875
No 75
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.6e-40 Score=365.95 Aligned_cols=251 Identities=20% Similarity=0.341 Sum_probs=198.6
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCc------
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE------ 697 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------ 697 (964)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+.
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457888999999999999999975 799999999875433 345679999999999999999999999876432
Q ss_pred ---------------------------------------------------eEEEEEeccCCChhhhhcCCCC-CccchH
Q 002121 698 ---------------------------------------------------QMLVYEFMANGTLRESLSGRSG-IHLDWK 725 (964)
Q Consensus 698 ---------------------------------------------------~~lV~E~~~~gsL~~~l~~~~~-~~l~~~ 725 (964)
.++|||||++|+|.+++..... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 7999999999999999987542 345677
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCC----------ceeecccccCc
Q 002121 726 RRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKG----------HVSTQVKGTMG 795 (964)
Q Consensus 726 ~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~gt~~ 795 (964)
.++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++........ .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999988 999999999999999999999999999877543211 12234569999
Q ss_pred ccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHH
Q 002121 796 YLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLE 875 (964)
Q Consensus 796 y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~ 875 (964)
|+|||++.+..++.++|||||||++|||++|..|+...... ..... .. ............+.+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~---~~~~~-~~-------------~~~~~~~~~~~~~~~ 304 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI---ITDVR-NL-------------KFPLLFTQKYPQEHM 304 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHH---HHHHH-TT-------------CCCHHHHHHCHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHH---HHHhh-cc-------------CCCcccccCChhHHH
Confidence 99999999999999999999999999999998775321111 11111 00 111111222345678
Q ss_pred HHHHhhhcCCCCCCCHHHHHH
Q 002121 876 LALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 876 li~~cl~~dP~~RPs~~evl~ 896 (964)
++.+||+.||++||++.|+++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCCcCCCHHHHhh
Confidence 999999999999999999985
No 76
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2e-40 Score=382.47 Aligned_cols=264 Identities=21% Similarity=0.286 Sum_probs=210.9
Q ss_pred ccHHHHHHhhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc---chhHHHHHHHHHHHhcCCCCccceeEEE
Q 002121 617 FSYDELKKCSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM---QGGLEFKTEIELLSRVHHKNLVGLVGFC 692 (964)
Q Consensus 617 ~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 692 (964)
+.+.+++...++|+..+.||+|+||+||+|+.. +|+.||||+++.... .....+.+|+.++.+++||||++++++|
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 345667777899999999999999999999975 578999999865321 1223488999999999999999999999
Q ss_pred EeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeec
Q 002121 693 FEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADF 772 (964)
Q Consensus 693 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DF 772 (964)
.+.+..++|||||++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ||||||||+|||++.++.+||+||
T Consensus 144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 144 QDDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcch
Confidence 99999999999999999999998642 36999999999999999999999988 999999999999999999999999
Q ss_pred ccceeecCCCCCceeecccccCcccCccccc-----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccC
Q 002121 773 GLSKLVSDSSKGHVSTQVKGTMGYLDPEYYM-----TQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRD 847 (964)
Q Consensus 773 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 847 (964)
|+|+....... ......+||+.|+|||++. .+.++.++|||||||++|||++|+.||.... ..+.....+...
T Consensus 220 Gla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~-~~~~~~~i~~~~ 297 (437)
T 4aw2_A 220 GSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHK 297 (437)
T ss_dssp TTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHTHH
T ss_pred hhhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC-hhHHHHhhhhcc
Confidence 99987654322 2334467999999999987 5678999999999999999999999997533 223333332211
Q ss_pred cccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCC--CCCHHHHHH
Q 002121 848 DEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATD--RPTMSEVVK 896 (964)
Q Consensus 848 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 896 (964)
.. ....... ..+ ...+.+++.+|+..+|++ ||+++|+++
T Consensus 298 ~~--~~~p~~~-~~~-------s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 298 ER--FQFPTQV-TDV-------SENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HH--CCCCSSC-CCS-------CHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred cc--ccCCccc-ccC-------CHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 00 0011110 001 134568999999888888 999999875
No 77
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5.2e-40 Score=372.27 Aligned_cols=274 Identities=16% Similarity=0.200 Sum_probs=207.8
Q ss_pred hhcCCCccceeecCCcEEEEEEEecC------CcEEEEEEecCCCcchh-----------HHHHHHHHHHHhcCCCCccc
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLSD------GQVVAIKRAQQGSMQGG-----------LEFKTEIELLSRVHHKNLVG 687 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~~------g~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~nIv~ 687 (964)
..++|.+.+.||+|+||+||+|.... ++.||||++........ ..+..|+..+++++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999999754 47899999875432111 12345666777888999999
Q ss_pred eeEEEEee----CceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEEC-
Q 002121 688 LVGFCFEQ----GEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLD- 762 (964)
Q Consensus 688 l~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~- 762 (964)
+++++... ...++||||+ +|+|.+++.... ..+++.+++.++.||+.||+|||+.+ |+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEES
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEec
Confidence 99999875 4589999999 999999997642 46999999999999999999999988 99999999999999
Q ss_pred -CCCcEEEeecccceeecCCCCC-----ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchh
Q 002121 763 -ENLTAKVADFGLSKLVSDSSKG-----HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYV 836 (964)
Q Consensus 763 -~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~ 836 (964)
.++.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 8999999999999876533211 1113345999999999999999999999999999999999999999743222
Q ss_pred HHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCCCC
Q 002121 837 VREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDGMN 908 (964)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 908 (964)
...+......... .+.+.+++.+.. ......+.+++.+||+.+|++||++.++++.|+.+++..+..
T Consensus 268 ~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~ 334 (364)
T 3op5_A 268 PKYVRDSKIRYRE---NIASLMDKCFPA--ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK 334 (364)
T ss_dssp HHHHHHHHHHHHH---CHHHHHHHHSCT--TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhh---hHHHHHHHhccc--ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 2221111100000 011111111100 111245778999999999999999999999999999876543
No 78
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=361.09 Aligned_cols=269 Identities=21% Similarity=0.276 Sum_probs=210.3
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeC--ceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQG--EQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lV~ 702 (964)
++|.+.+.||+|+||+||+|+.. +|+.||||+++.... .....+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 57888999999999999999975 589999999875432 33456889999999999999999999998765 679999
Q ss_pred EeccCCChhhhhcCCC-CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE----CCCCcEEEeeccccee
Q 002121 703 EFMANGTLRESLSGRS-GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL----DENLTAKVADFGLSKL 777 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl----~~~~~~kl~DFGla~~ 777 (964)
||+++|+|.+++.... ...+++.+++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 9999999999998654 234899999999999999999999988 9999999999999 8888999999999987
Q ss_pred ecCCCCCceeecccccCcccCccccc--------cCCCCCchhHHHHHHHHHHHHhCCCCCCC---CchhHHHHHHHhcc
Q 002121 778 VSDSSKGHVSTQVKGTMGYLDPEYYM--------TQQLTEKSDVYSFGVVMLELITAKQPIEK---GKYVVREVRTAMNR 846 (964)
Q Consensus 778 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDv~S~Gvvl~elltg~~p~~~---~~~~~~~~~~~~~~ 846 (964)
...... .....||+.|+|||++. +..++.++|||||||++|||++|+.||.. .....+.+......
T Consensus 166 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 166 LEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred cCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 654322 23456999999999986 57789999999999999999999999962 22233333333332
Q ss_pred Ccccccc-cccccCc------cch---hhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 002121 847 DDEEHYG-LTEMMDP------TIR---NTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETL 901 (964)
Q Consensus 847 ~~~~~~~-~~~~~d~------~l~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 901 (964)
.+..... ....... .+. .........+.+++.+||+.||++|||++|+++...+.
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 2211100 0000000 000 11233445678999999999999999999999877654
No 79
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=371.74 Aligned_cols=248 Identities=23% Similarity=0.298 Sum_probs=199.4
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 700 (964)
.++|+..+.||+|+||+||+|+.. +|+.||||+++... ......+.+|.++++++ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999964 68999999987532 22334678899999998 69999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
||||+++|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+....
T Consensus 102 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999997643 5899999999999999999999988 99999999999999999999999999985432
Q ss_pred CCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 781 SSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 781 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+........... ....+.
T Consensus 177 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-~~~~~~~i~~~~~~----~p~~~~- 248 (353)
T 3txo_A 177 NG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN-EDDLFEAILNDEVV----YPTWLH- 248 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCCC----CCTTSC-
T ss_pred CC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCC----CCCCCC-
Confidence 21 23345679999999999998899999999999999999999999996433 22333333322211 111111
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCH------HHHHH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTM------SEVVK 896 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 896 (964)
..+.+++.+||+.||++||++ .|+++
T Consensus 249 ----------~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 249 ----------EDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ----------HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ----------HHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 345689999999999999998 66654
No 80
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5.8e-40 Score=355.25 Aligned_cols=253 Identities=21% Similarity=0.347 Sum_probs=205.7
Q ss_pred cCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEee--CceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ--GEQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~ 702 (964)
++|...+.||+|+||+||+|+.+ |+.||||+++.... ...+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57888999999999999999985 88999999986543 3345799999999999999999999999876 7789999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++|+|.+++.......+++.+++.++.|++.||+|||+.+ ++|+||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-- 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-- 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc--
Confidence 9999999999998876557999999999999999999999865 5699999999999999999999999998754222
Q ss_pred CCceeecccccCcccCccccccCCCCC---chhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccC
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTE---KSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
....||+.|+|||++.+..++. ++|||||||++|||++|+.||........ ......... .
T Consensus 166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~----------~ 229 (271)
T 3kmu_A 166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMKVALEGL----------R 229 (271)
T ss_dssp -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHHHHHSCC----------C
T ss_pred -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHHHHhcCC----------C
Confidence 2245899999999998765544 89999999999999999999975433222 122211111 0
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLL 902 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 902 (964)
+.+... ....+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 230 ~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 230 PTIPPG---ISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp CCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 111111 1145678999999999999999999999999874
No 81
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.8e-40 Score=379.93 Aligned_cols=259 Identities=22% Similarity=0.301 Sum_probs=208.3
Q ss_pred HHHHHHhhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002121 619 YDELKKCSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFE 694 (964)
Q Consensus 619 ~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 694 (964)
..+++...++|...+.||+|+||+||+|+.. +|+.||+|+++... ......+.+|+++++.++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4556667789999999999999999999965 68999999986422 1223458899999999999999999999999
Q ss_pred eCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccc
Q 002121 695 QGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGL 774 (964)
Q Consensus 695 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGl 774 (964)
.+..++|||||++|+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccce
Confidence 99999999999999999999754 4889999999999999999999988 99999999999999999999999999
Q ss_pred ceeecCCCCCceeecccccCcccCccccccCC----CCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccc
Q 002121 775 SKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQ----LTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEE 850 (964)
Q Consensus 775 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 850 (964)
|+....... ......+||+.|+|||++.... ++.++|||||||++|||++|+.||.... .......++......
T Consensus 215 a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-~~~~~~~i~~~~~~~ 292 (410)
T 3v8s_A 215 CMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMNHKNSL 292 (410)
T ss_dssp CEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHTHHHHC
T ss_pred eEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC-hhhHHHHHHhccccc
Confidence 987654321 2234567999999999997655 7899999999999999999999996433 233333332211100
Q ss_pred ccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCC--CCCHHHHHH
Q 002121 851 HYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATD--RPTMSEVVK 896 (964)
Q Consensus 851 ~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 896 (964)
. ... ...+ ...+.+++.+||+.+|++ ||+++||++
T Consensus 293 ~--~p~--~~~~-------s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 293 T--FPD--DNDI-------SKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp C--CCT--TCCC-------CHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred c--CCC--cccc-------cHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 0 000 0011 144568999999999988 999999976
No 82
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5.9e-40 Score=357.25 Aligned_cols=262 Identities=28% Similarity=0.455 Sum_probs=212.9
Q ss_pred HHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 623 KKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 623 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
+...++|+..+.||+|+||.||+|...+++.||||+++.... ..+.+.+|++++++++||||+++++++. .+..++||
T Consensus 9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 86 (279)
T 1qpc_A 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIIT 86 (279)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred ccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEE
Confidence 334567889999999999999999988888999999976443 3467999999999999999999999986 45689999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++|+|.+++....+..+++.+++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 9999999999997654346899999999999999999999988 9999999999999999999999999998765432
Q ss_pred CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
. .......+|+.|+|||++.++.++.++||||||+++|||++ |+.||..... .+.......... ......
T Consensus 164 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~-------~~~~~~ 234 (279)
T 1qpc_A 164 Y-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-PEVIQNLERGYR-------MVRPDN 234 (279)
T ss_dssp E-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHHTTCC-------CCCCTT
T ss_pred c-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-HHHHHHHhcccC-------CCCccc
Confidence 1 22233457889999999998889999999999999999999 8999864332 222222211110 000111
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
....+.+++.+|++.||++||++.++++.|+.+....
T Consensus 235 -------~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 235 -------CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp -------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -------ccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 1145678999999999999999999999999998664
No 83
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.5e-40 Score=359.64 Aligned_cols=260 Identities=26% Similarity=0.396 Sum_probs=198.0
Q ss_pred hhcCCCccceeecCCcEEEEEEEecC----CcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLSD----GQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQM 699 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 699 (964)
..++|...+.||+|+||.||+|.... +..||+|+++.... ...+.+.+|+.++++++||||+++++++. .+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 34678889999999999999998642 45799999876433 33457899999999999999999999984 56789
Q ss_pred EEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeec
Q 002121 700 LVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVS 779 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 779 (964)
+||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccC
Confidence 9999999999999997543 46899999999999999999999988 9999999999999999999999999998765
Q ss_pred CCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCccccccccccc
Q 002121 780 DSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 780 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
.... .......+|+.|+|||++....++.++||||||+++|||++ |+.||...... +........... ..
T Consensus 168 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-~~~~~i~~~~~~-------~~ 238 (281)
T 1mp8_A 168 DSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERL-------PM 238 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTCCC-------CC
T ss_pred cccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-HHHHHHHcCCCC-------CC
Confidence 4322 22233457889999999998899999999999999999997 99999643221 111111111110 01
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
.+.. ...+.+++.+||+.||++||++.|+++.|+.++++.
T Consensus 239 ~~~~-------~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 239 PPNC-------PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp CTTC-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCC-------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1111 245668999999999999999999999999988654
No 84
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=377.54 Aligned_cols=253 Identities=21% Similarity=0.309 Sum_probs=204.4
Q ss_pred hhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
..++|...+.||+|+||+||+|.. .+|+.||+|++...... ....+.+|++++++++|||||++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 456799999999999999999985 47899999998765432 345689999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEEC---CCCcEEEeecccceee
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLD---ENLTAKVADFGLSKLV 778 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~---~~~~~kl~DFGla~~~ 778 (964)
||||++|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++..
T Consensus 89 ~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp ECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999987653 5899999999999999999999988 99999999999998 5688999999999876
Q ss_pred cCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccccccc
Q 002121 779 SDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 779 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+........... . .
T Consensus 164 ~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~~~~~----~---~ 233 (444)
T 3soa_A 164 EGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKAGAYD----F---P 233 (444)
T ss_dssp CTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHTCCC----C---C
T ss_pred cCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhCCCC----C---C
Confidence 5432 223446799999999999998999999999999999999999999965332 2222222221111 0 0
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.+... .....+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~----~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 234 SPEWD----TVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp TTTTT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccc----cCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11110 11144668999999999999999999986
No 85
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=9e-40 Score=358.46 Aligned_cols=263 Identities=24% Similarity=0.361 Sum_probs=203.7
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
++|+..+.||+|+||+||+|+.. +|+.||||++...... ....+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47888999999999999999964 6899999998754332 23578899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 783 (964)
|+++ ++.+.+.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV- 155 (292)
T ss_dssp CCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-
T ss_pred cCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcc-
Confidence 9986 5655554432 36999999999999999999999988 9999999999999999999999999998764332
Q ss_pred CceeecccccCcccCccccccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhc---cCccccc-cccccc
Q 002121 784 GHVSTQVKGTMGYLDPEYYMTQQ-LTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMN---RDDEEHY-GLTEMM 858 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~ 858 (964)
.......||+.|+|||++.+.. ++.++|||||||++|||++|..|+..+....+.+..... ....... ...+..
T Consensus 156 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 156 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp -SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred -ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 2234457899999999997765 799999999999999999999997665554444443322 1111000 000000
Q ss_pred C----------ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 859 D----------PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 859 d----------~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
+ ..+..........+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 0000011122345679999999999999999999975
No 86
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.4e-39 Score=355.77 Aligned_cols=253 Identities=31% Similarity=0.521 Sum_probs=201.4
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchh-------HHHHHHHHHHHhcCCCCccceeEEEEeeCc
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGG-------LEFKTEIELLSRVHHKNLVGLVGFCFEQGE 697 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~-------~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 697 (964)
.++|...+.||+|+||+||+|+. .+++.||||++........ ..+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35788899999999999999996 4789999999865433211 57899999999999999999999986543
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc-----EEEeec
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT-----AKVADF 772 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~-----~kl~DF 772 (964)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||||+|||++.++. +||+||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred -eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 79999999999999887653 46999999999999999999999865 56999999999999988876 999999
Q ss_pred ccceeecCCCCCceeecccccCcccCccccc--cCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHH-HHHHHhccCcc
Q 002121 773 GLSKLVSDSSKGHVSTQVKGTMGYLDPEYYM--TQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVR-EVRTAMNRDDE 849 (964)
Q Consensus 773 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~ 849 (964)
|+++.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||........ ..........
T Consensus 174 g~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~- 247 (287)
T 4f0f_A 174 GLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL- 247 (287)
T ss_dssp TTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC-
T ss_pred Cccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC-
Confidence 99975432 234467999999999984 45678999999999999999999999974332221 1221111111
Q ss_pred cccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q 002121 850 EHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIET 900 (964)
Q Consensus 850 ~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 900 (964)
...+.... ...+.+++.+||+.||++||++.|+++.|++
T Consensus 248 -----~~~~~~~~-------~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 248 -----RPTIPEDC-------PPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp -----CCCCCTTS-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -----CCCCCccc-------CHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 01111111 1456799999999999999999999998875
No 87
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.5e-40 Score=360.75 Aligned_cols=262 Identities=27% Similarity=0.430 Sum_probs=215.4
Q ss_pred HhhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 624 KCSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 624 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
...++|...+.||+|+||+||+|... +++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 34678889999999999999999975 48899999997543 34567899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 9999999999998766567999999999999999999999998 9999999999999999999999999998765332
Q ss_pred CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
........+|+.|+|||++.+..++.++||||||+++|||++ |..||...... .... .+..... ......
T Consensus 166 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-~~~~-~~~~~~~------~~~~~~ 236 (288)
T 3kfa_A 166 -YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYE-LLEKDYR------MERPEG 236 (288)
T ss_dssp -SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHH-HHHTTCC------CCCCTT
T ss_pred -cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHH-HHhccCC------CCCCCC
Confidence 233344567889999999998999999999999999999999 99998643211 1111 1111110 000111
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
....+.+++.+|++.||++||++.|+++.|+.+.++.
T Consensus 237 -------~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 237 -------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp -------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1145678999999999999999999999999987653
No 88
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=356.96 Aligned_cols=249 Identities=24% Similarity=0.360 Sum_probs=196.6
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcc--------------------------hhHHHHHHHHHHH
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQ--------------------------GGLEFKTEIELLS 678 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~ 678 (964)
.++|...+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 36788999999999999999996 46899999998654321 1246889999999
Q ss_pred hcCCCCccceeEEEEe--eCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCC
Q 002121 679 RVHHKNLVGLVGFCFE--QGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKS 756 (964)
Q Consensus 679 ~l~H~nIv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~ 756 (964)
+++||||+++++++.+ .+..++||||+++|+|.+++.. ..+++.++..++.|+++||+|||+.+ |+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCH
Confidence 9999999999999987 5678999999999999987654 35999999999999999999999988 99999999
Q ss_pred CcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCC---CCCchhHHHHHHHHHHHHhCCCCCCCC
Q 002121 757 TNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQ---LTEKSDVYSFGVVMLELITAKQPIEKG 833 (964)
Q Consensus 757 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDv~S~Gvvl~elltg~~p~~~~ 833 (964)
+|||++.++.+||+|||+++...... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 243 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred HHEEECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence 99999999999999999998765432 2234467999999999997654 478899999999999999999999754
Q ss_pred chhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 834 KYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.. ............. ... .+.+ ...+.+++.+||+.||++||++.|+++
T Consensus 244 ~~-~~~~~~~~~~~~~----~~~--~~~~-------~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 244 RI-MCLHSKIKSQALE----FPD--QPDI-------AEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SH-HHHHHHHHHCCCC----CCS--SSCC-------CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cH-HHHHHHHhcccCC----CCC--cccc-------CHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 32 2222221111110 000 0111 145678999999999999999999875
No 89
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.8e-40 Score=365.72 Aligned_cols=259 Identities=26% Similarity=0.430 Sum_probs=205.0
Q ss_pred cCCCccceeecCCcEEEEEEEe-----cCCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEee--Cce
Q 002121 627 NNFSESNEIGSGGYGKVYRGML-----SDGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ--GEQ 698 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~-----~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 698 (964)
+.|+..+.||+|+||.||+|++ .+|+.||||+++.... .....+.+|++++++++||||+++++++.+. +..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578889999999999999984 3688999999875432 3346789999999999999999999999876 668
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccccc
Confidence 99999999999999996443 35899999999999999999999988 999999999999999999999999999877
Q ss_pred cCCCCC-ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchh-------------HHHHHHHh
Q 002121 779 SDSSKG-HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYV-------------VREVRTAM 844 (964)
Q Consensus 779 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~-------------~~~~~~~~ 844 (964)
...... .......||..|+|||++.+..++.++||||+|+++|||++|+.|+...... ...+....
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL 256 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence 544321 1233456888999999999999999999999999999999999986432111 11111111
Q ss_pred ccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 002121 845 NRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLL 902 (964)
Q Consensus 845 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 902 (964)
.... ..... ......+.+++.+||+.||++|||+.|+++.|+.++
T Consensus 257 ~~~~----------~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 257 KEGK----------RLPCP---PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HTTC----------CCCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hccC----------CCCCC---CCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1110 00000 111245779999999999999999999999999876
No 90
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.5e-39 Score=356.04 Aligned_cols=263 Identities=21% Similarity=0.323 Sum_probs=200.2
Q ss_pred cCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEe
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
++|...+.||+|+||+||+|+..+|+.||+|++...... ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 468889999999999999999988999999998754332 235788999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKG 784 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 784 (964)
+++ +|.+++.... ..+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV-- 154 (288)
T ss_dssp CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCccc--
Confidence 985 9999987643 36899999999999999999999988 9999999999999999999999999998654321
Q ss_pred ceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhH--HHHHHHhccCccccc-ccc--ccc
Q 002121 785 HVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVV--REVRTAMNRDDEEHY-GLT--EMM 858 (964)
Q Consensus 785 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~-~~~--~~~ 858 (964)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ..+............ ... ...
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 12234568999999999875 458999999999999999999999997543221 111111111110000 000 001
Q ss_pred Cccc--------hhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 859 DPTI--------RNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 859 d~~l--------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
++.. ..........+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1100 0001112245679999999999999999999875
No 91
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.5e-39 Score=364.04 Aligned_cols=262 Identities=25% Similarity=0.437 Sum_probs=211.9
Q ss_pred hcCCCccceeecCCcEEEEEEEec--------CCcEEEEEEecCCCc-chhHHHHHHHHHHHhc-CCCCccceeEEEEee
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS--------DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQ 695 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 695 (964)
.++|...+.||+|+||.||+|... +++.||||+++.... .....+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467888999999999999999863 467899999976533 3345789999999999 899999999999999
Q ss_pred CceEEEEEeccCCChhhhhcCCCC--------------CccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE
Q 002121 696 GEQMLVYEFMANGTLRESLSGRSG--------------IHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL 761 (964)
Q Consensus 696 ~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 761 (964)
+..++||||+++|+|.+++..... ..+++.+++.++.|+++||+|||+.+ |+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEE
Confidence 999999999999999999986531 24899999999999999999999988 9999999999999
Q ss_pred CCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002121 762 DENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREV 840 (964)
Q Consensus 762 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 840 (964)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... ..+..
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-~~~~~ 269 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELF 269 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC-HHHHH
Confidence 9999999999999987754433223334567889999999998889999999999999999999 999986432 22222
Q ss_pred HHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 841 RTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
......... ..... ....+.+++.+||+.||++||++.|+++.|+.+++..
T Consensus 270 ~~~~~~~~~-------~~~~~-------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 270 KLLKEGHRM-------DKPAN-------CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp HHHHHTCCC-------CCCTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCC-------CCCcc-------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 221111110 00111 1245678999999999999999999999999998654
No 92
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=361.52 Aligned_cols=244 Identities=23% Similarity=0.356 Sum_probs=203.5
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
++|+..+.||+|+||+||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 57888999999999999999964 78999999987532 123456789999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp CCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 9999999999997643 6899999999999999999999988 999999999999999999999999999876432
Q ss_pred CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTI 862 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (964)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ............. ....+
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~----~p~~~---- 226 (318)
T 1fot_A 160 ----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-MKTYEKILNAELR----FPPFF---- 226 (318)
T ss_dssp ----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHCCCC----CCTTS----
T ss_pred ----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCC----CCCCC----
Confidence 2345799999999999999999999999999999999999999965432 2333333322111 11111
Q ss_pred hhhhHHHHHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q 002121 863 RNTVLLGFRRYLELALQCVEESATDRP-----TMSEVVK 896 (964)
Q Consensus 863 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 896 (964)
...+.+++.+|++.||++|| +++|+++
T Consensus 227 -------~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 227 -------NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -------CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -------CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 13466899999999999999 8888874
No 93
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=7.8e-40 Score=371.36 Aligned_cols=246 Identities=22% Similarity=0.298 Sum_probs=198.3
Q ss_pred cceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEeccCCCh
Q 002121 632 SNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMANGTL 710 (964)
Q Consensus 632 ~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL 710 (964)
.+.||+|+||.||+|.. .+|+.||+|+++.......+++.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 56899999999999996 46899999999876666667899999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE--CCCCcEEEeecccceeecCCCCCceee
Q 002121 711 RESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL--DENLTAKVADFGLSKLVSDSSKGHVST 788 (964)
Q Consensus 711 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl--~~~~~~kl~DFGla~~~~~~~~~~~~~ 788 (964)
.+++.... ..+++.++..++.||++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++....... ..
T Consensus 174 ~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~ 246 (373)
T 2x4f_A 174 FDRIIDES-YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LK 246 (373)
T ss_dssp HHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CC
T ss_pred HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---cc
Confidence 99886542 46899999999999999999999988 9999999999999 6778999999999987654322 23
Q ss_pred cccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccchhhhHH
Q 002121 789 QVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLL 868 (964)
Q Consensus 789 ~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 868 (964)
...||+.|+|||++....++.++|||||||++|||++|+.||..... .+.+......... . ..... ..
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~----~----~~~~~---~~ 314 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-AETLNNILACRWD----L----EDEEF---QD 314 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCC----S----CSGGG---TT
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCC----C----Chhhh---cc
Confidence 34699999999999988999999999999999999999999975432 2233333222211 0 00000 01
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 869 GFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 869 ~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
....+.+++.+||+.||++||++.|+++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1245678999999999999999999986
No 94
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-39 Score=367.08 Aligned_cols=253 Identities=23% Similarity=0.303 Sum_probs=203.5
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC-----cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS-----MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQM 699 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 699 (964)
.+.|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 457889999999999999999964 68999999986321 123467999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCC--CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc---EEEeeccc
Q 002121 700 LVYEFMANGTLRESLSGRS--GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT---AKVADFGL 774 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~DFGl 774 (964)
+|||||++|+|.+++.... +..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999998875432 345899999999999999999999988 999999999999987655 99999999
Q ss_pred ceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccc
Q 002121 775 SKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGL 854 (964)
Q Consensus 775 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (964)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... +...........
T Consensus 180 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~i~~~~~~----- 250 (351)
T 3c0i_A 180 AIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYK----- 250 (351)
T ss_dssp CEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHHHHHHHTCCC-----
T ss_pred eeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHHHHHHcCCCC-----
Confidence 98765432 223445799999999999999999999999999999999999999975432 112222111110
Q ss_pred ccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 855 TEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 855 ~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.++.... .....+.+++.+||+.||++||++.|+++
T Consensus 251 ---~~~~~~~---~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 ---MNPRQWS---HISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp ---CCHHHHT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---CCccccc---cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111111 11245678999999999999999999975
No 95
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=371.34 Aligned_cols=245 Identities=21% Similarity=0.294 Sum_probs=197.7
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc---chhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM---QGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 700 (964)
.++|+..+.||+|+||+||+|+.. +++.||||+++.... .....+.+|..++.++ +|||||++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357889999999999999999965 688999999875432 2234588999999887 89999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
||||+++|+|..++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+....
T Consensus 131 V~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999997643 6899999999999999999999988 99999999999999999999999999986332
Q ss_pred CCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc-------hhHHHHHHHhccCcccccc
Q 002121 781 SSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGK-------YVVREVRTAMNRDDEEHYG 853 (964)
Q Consensus 781 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~-------~~~~~~~~~~~~~~~~~~~ 853 (964)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+.+...+..... .
T Consensus 206 ~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~---~ 280 (396)
T 4dc2_A 206 PG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---R 280 (396)
T ss_dssp TT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC---C
T ss_pred CC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc---C
Confidence 22 23345679999999999999999999999999999999999999995211 111112111111110 0
Q ss_pred cccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCH
Q 002121 854 LTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTM 891 (964)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 891 (964)
....+ ...+.+++.+||+.||++||++
T Consensus 281 ~p~~~-----------s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 IPRSL-----------SVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CCTTS-----------CHHHHHHHHHHTCSCTTTSTTC
T ss_pred CCCcC-----------CHHHHHHHHHHhcCCHhHcCCC
Confidence 11111 1345689999999999999996
No 96
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=8.7e-40 Score=362.04 Aligned_cols=260 Identities=23% Similarity=0.344 Sum_probs=197.7
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcc---hhHHHHHHHHHHHhcCCCCccceeEEEEeeCce---
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQ---GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQ--- 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~--- 698 (964)
.++|+..+.||+|+||.||+|+. .+|+.||||+++..... ....+.+|++++++++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46789999999999999999995 57899999999764332 234688999999999999999999999876544
Q ss_pred -EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 699 -MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 699 -~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
++||||+++|+|.++++... .+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 99999999999999997543 6899999999999999999999988 99999999999999999999999999987
Q ss_pred ecCCCCC-ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccccc
Q 002121 778 VSDSSKG-HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTE 856 (964)
Q Consensus 778 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (964)
....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~------- 237 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-SVAYQHVREDPI------- 237 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHCCCC-------
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCC-------
Confidence 6543221 2223456999999999999999999999999999999999999999754332 222222221110
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHH-HHHHHHH
Q 002121 857 MMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVV-KAIETLL 902 (964)
Q Consensus 857 ~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl-~~L~~~~ 902 (964)
.+.. ........+.+++.+||+.||++||++.+++ +.+....
T Consensus 238 --~~~~--~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 238 --PPSA--RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp --CHHH--HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred --Cccc--ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 0000 0011124567899999999999999776655 4444443
No 97
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.8e-40 Score=353.27 Aligned_cols=258 Identities=31% Similarity=0.484 Sum_probs=211.1
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEec
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFM 705 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 705 (964)
.++|...+.||+|+||.||+|...+++.||+|++...... .+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 3578888999999999999999988899999999865433 467999999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCCc
Q 002121 706 ANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGH 785 (964)
Q Consensus 706 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 785 (964)
++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... ..
T Consensus 86 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~ 160 (267)
T 3t9t_A 86 EHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YT 160 (267)
T ss_dssp TTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HH
T ss_pred CCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccc-cc
Confidence 9999999997643 36899999999999999999999988 9999999999999999999999999998653221 11
Q ss_pred eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccCccchh
Q 002121 786 VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRN 864 (964)
Q Consensus 786 ~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 864 (964)
......+|+.|+|||++....++.++||||||+++|||++ |+.||..... .+........... .....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~i~~~~~~-------~~~~~--- 229 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTGFRL-------YKPRL--- 229 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHHTTCCC-------CCCTT---
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-HHHHHHHhcCCcC-------CCCcc---
Confidence 1223457789999999998899999999999999999999 8999865332 2222222111110 00111
Q ss_pred hhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 865 TVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 865 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
....+.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 230 ----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 230 ----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 114567899999999999999999999999998753
No 98
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.7e-40 Score=362.95 Aligned_cols=245 Identities=22% Similarity=0.278 Sum_probs=193.9
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc--hhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|+..++||+|+||+||+|+.. +|+.||||++...... ...++..|+..+.++ +||||++++++|.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 357999999999999999999975 7999999998654332 233455666666665 899999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+ +|+|.+++.... ..++|.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred Eecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 9999 679999887543 46999999999999999999999988 999999999999999999999999999876443
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
. ......||+.|+|||++.+ .++.++|||||||++|||++|..|+...... .... .. ...+.
T Consensus 211 ~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~----~~~~-~~---------~~~~~ 272 (311)
T 3p1a_A 211 G---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW----QQLR-QG---------YLPPE 272 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH----HHHT-TT---------CCCHH
T ss_pred C---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH----HHHh-cc---------CCCcc
Confidence 2 2334569999999998875 7899999999999999999998776543221 1111 11 11111
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
+.. .....+.+++.+||+.||++|||+.|+++
T Consensus 273 ~~~---~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 273 FTA---GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHT---TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccc---CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 111 11245678999999999999999999985
No 99
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=366.31 Aligned_cols=252 Identities=21% Similarity=0.347 Sum_probs=199.1
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCC--CCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHH--KNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lV 701 (964)
.++|++.+.||+|+||.||+|...+++.||||++...... ....+.+|++++++++| +||+++++++.+.+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 3568889999999999999999888999999998754332 33578999999999976 9999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|| +.+|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 88 ~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp EC-CCSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred Ee-CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 99 56889999998653 6899999999999999999999988 99999999999997 678999999999876544
Q ss_pred CCCceeecccccCcccCcccccc-----------CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMT-----------QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEE 850 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 850 (964)
..........||+.|+|||++.. ..++.++|||||||++|||++|+.||.........+..........
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 240 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI 240 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCccc
Confidence 33333445679999999999864 6789999999999999999999999976444444444333222110
Q ss_pred ccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 851 HYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 851 ~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
...... ...+.+++.+||+.||++|||+.|+++.
T Consensus 241 --~~~~~~-----------~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 241 --EFPDIP-----------EKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp --CCCCCS-----------CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --CCcccC-----------CHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 011111 1346689999999999999999999864
No 100
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=356.58 Aligned_cols=255 Identities=29% Similarity=0.478 Sum_probs=199.0
Q ss_pred cCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEecc
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMA 706 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~ 706 (964)
++|+..+.||+|+||+||+|+.. ++.||||++... ...+.+.+|++++++++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 46778899999999999999985 789999998643 34467999999999999999999999886 45899999999
Q ss_pred CCChhhhhcCCCC-CccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc-EEEeecccceeecCCCCC
Q 002121 707 NGTLRESLSGRSG-IHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT-AKVADFGLSKLVSDSSKG 784 (964)
Q Consensus 707 ~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~-~kl~DFGla~~~~~~~~~ 784 (964)
+|+|.+++..... ..+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||+++.....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999986542 24788999999999999999999943334999999999999998886 799999999765432
Q ss_pred ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchh-HHHHHHHhccCcccccccccccCccch
Q 002121 785 HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYV-VREVRTAMNRDDEEHYGLTEMMDPTIR 863 (964)
Q Consensus 785 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (964)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............ +...
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~ 226 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR-----------PPLI 226 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC-----------CCCB
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC-----------CCcc
Confidence 22346999999999999999999999999999999999999999743221 111111111111 0011
Q ss_pred hhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 864 NTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 864 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
.. ....+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 227 ~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 227 KN---LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred cc---cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 11 1134668999999999999999999999999987654
No 101
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=5.8e-40 Score=367.82 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=203.1
Q ss_pred HhhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhc-CCCCccceeEEEEeeCce
Q 002121 624 KCSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQ 698 (964)
Q Consensus 624 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 698 (964)
...++|...+.||+|+||+||+|+.+ +|+.||||+++... ......+..|.+++.++ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578999999999999999999975 68999999987532 22345678899999987 899999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
++||||+++|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 99999999999999997543 5899999999999999999999988 999999999999999999999999999864
Q ss_pred cCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccccccc
Q 002121 779 SDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 779 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+........... ....+
T Consensus 169 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-~~~~~~~i~~~~~~----~p~~~ 241 (345)
T 1xjd_A 169 MLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD-EEELFHSIRMDNPF----YPRWL 241 (345)
T ss_dssp CCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCCC----CCTTS
T ss_pred ccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHhCCCC----CCccc
Confidence 3222 22345679999999999999999999999999999999999999996433 22222222222111 11111
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHH-HHH
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMS-EVV 895 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 895 (964)
+ ..+.+++.+||+.||++||++. |+.
T Consensus 242 s-----------~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 242 E-----------KEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp C-----------HHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred C-----------HHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1 3456899999999999999997 664
No 102
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.5e-40 Score=370.36 Aligned_cols=210 Identities=24% Similarity=0.339 Sum_probs=185.0
Q ss_pred cccccHHHHHHhhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcC-----CCCccc
Q 002121 614 ARWFSYDELKKCSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVH-----HKNLVG 687 (964)
Q Consensus 614 ~~~~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~nIv~ 687 (964)
...+++.+.....++|.+.+.||+|+||+||+|+. .+|+.||||+++.. ......+..|++++++++ |||||+
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 44566777777789999999999999999999996 47899999998743 233456788999999996 999999
Q ss_pred eeEEEEeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC----
Q 002121 688 LVGFCFEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE---- 763 (964)
Q Consensus 688 l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---- 763 (964)
+++++...+..++||||+ +++|.+++.......+++.++..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcccccc
Confidence 999999999999999999 899999998766556999999999999999999999988 999999999999976
Q ss_pred ---------------------CCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHH
Q 002121 764 ---------------------NLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLE 822 (964)
Q Consensus 764 ---------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~e 822 (964)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 8899999999998754322 34568999999999999999999999999999999
Q ss_pred HHhCCCCCCCC
Q 002121 823 LITAKQPIEKG 833 (964)
Q Consensus 823 lltg~~p~~~~ 833 (964)
|++|+.||...
T Consensus 252 ll~g~~pf~~~ 262 (360)
T 3llt_A 252 LYTGSLLFRTH 262 (360)
T ss_dssp HHHSSCSCCCS
T ss_pred HHHCCCCCCCC
Confidence 99999999743
No 103
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2e-39 Score=361.69 Aligned_cols=248 Identities=24% Similarity=0.363 Sum_probs=194.1
Q ss_pred hcCCCccceeecCCcEEEEEEEe----cCCcEEEEEEecCCCc----chhHHHHHHHHHHHhcCCCCccceeEEEEeeCc
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML----SDGQVVAIKRAQQGSM----QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE 697 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~----~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 697 (964)
.++|...+.||+|+||.||+|+. .+|+.||+|+++.... .....+.+|++++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35788899999999999999996 4789999999976432 233467899999999999999999999999999
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
.++||||+++|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999997543 5889999999999999999999988 99999999999999999999999999976
Q ss_pred ecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccc
Q 002121 778 VSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEM 857 (964)
Q Consensus 778 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (964)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+......... ...
T Consensus 171 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~----~p~- 242 (327)
T 3a62_A 171 SIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-KKTIDKILKCKLN----LPP- 242 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHTCCC----CCT-
T ss_pred cccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhCCCC----CCC-
Confidence 43221 223446799999999999999999999999999999999999999975432 2222222222110 111
Q ss_pred cCccchhhhHHHHHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q 002121 858 MDPTIRNTVLLGFRRYLELALQCVEESATDRP-----TMSEVVK 896 (964)
Q Consensus 858 ~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 896 (964)
.+ ...+.+++.+||+.||++|| ++.|+++
T Consensus 243 ---~~-------~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 243 ---YL-------TQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ---TS-------CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ---CC-------CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11 14466899999999999999 6777764
No 104
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-39 Score=358.15 Aligned_cols=270 Identities=26% Similarity=0.410 Sum_probs=206.7
Q ss_pred HHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhc--CCCCccceeEEEEee----
Q 002121 622 LKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRV--HHKNLVGLVGFCFEQ---- 695 (964)
Q Consensus 622 l~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~---- 695 (964)
-....++|+..+.||+|+||.||+|+.. |+.||||++... ....+..|.+++... +||||+++++++.+.
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 3445678999999999999999999985 899999998643 233455666666655 899999999999887
Q ss_pred CceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcC-----CCCeeccCCCCCcEEECCCCcEEEe
Q 002121 696 GEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELA-----NPPIIHRDVKSTNILLDENLTAKVA 770 (964)
Q Consensus 696 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~Dlk~~NILl~~~~~~kl~ 770 (964)
...++||||+++|+|.++++.. .+++.+++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 6789999999999999999754 5999999999999999999999871 1239999999999999999999999
Q ss_pred ecccceeecCCCCCc--eeecccccCcccCccccccCCCCCc------hhHHHHHHHHHHHHhC----------CCCCCC
Q 002121 771 DFGLSKLVSDSSKGH--VSTQVKGTMGYLDPEYYMTQQLTEK------SDVYSFGVVMLELITA----------KQPIEK 832 (964)
Q Consensus 771 DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------sDv~S~Gvvl~elltg----------~~p~~~ 832 (964)
|||+++......... ......||+.|+|||++.+...+.+ +|||||||++|||+|| +.||..
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 999998764432211 1124579999999999987766654 9999999999999999 566642
Q ss_pred C---chhHHHHHHHhccCcccccccccccCccchhh--hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCCC
Q 002121 833 G---KYVVREVRTAMNRDDEEHYGLTEMMDPTIRNT--VLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDGM 907 (964)
Q Consensus 833 ~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 907 (964)
. ............... ..+..... .......+.+++.+||+.||++|||+.|+++.|+.+.+....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 335 (337)
T 3mdy_A 265 LVPSDPSYEDMREIVCIKK---------LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335 (337)
T ss_dssp TSCSSCCHHHHHHHHTTSC---------CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTTC
T ss_pred hcCCCCchhhhHHHHhhhc---------cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhccc
Confidence 1 112222222221111 11111111 224456788999999999999999999999999999876643
No 105
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.2e-39 Score=364.21 Aligned_cols=261 Identities=24% Similarity=0.286 Sum_probs=203.6
Q ss_pred HHHHhhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCC-----CcchhHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002121 621 ELKKCSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQG-----SMQGGLEFKTEIELLSRVHHKNLVGLVGFCFE 694 (964)
Q Consensus 621 el~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 694 (964)
++....++|...+.||+|+||+||+|.. .+++.||+|++... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 3456678899999999999999999996 46889999998643 23445679999999999999999999999999
Q ss_pred eCceEEEEEeccCCChhhhhcCC--------------------------------------CCCccchHHHHHHHHHHHH
Q 002121 695 QGEQMLVYEFMANGTLRESLSGR--------------------------------------SGIHLDWKRRLRIALGSAR 736 (964)
Q Consensus 695 ~~~~~lV~E~~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~ia~ 736 (964)
.+..++||||+++|+|.+++... ....+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 0123577888999999999
Q ss_pred HHHHHhhcCCCCeeccCCCCCcEEECCCC--cEEEeecccceeecCCCCC--ceeecccccCcccCcccccc--CCCCCc
Q 002121 737 GLAYLHELANPPIIHRDVKSTNILLDENL--TAKVADFGLSKLVSDSSKG--HVSTQVKGTMGYLDPEYYMT--QQLTEK 810 (964)
Q Consensus 737 gL~yLH~~~~~~ivH~Dlk~~NILl~~~~--~~kl~DFGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~ 810 (964)
||+|||+.+ |+||||||+|||++.++ .+||+|||+++........ .......||+.|+|||++.. ..++.+
T Consensus 180 ~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 999999988 99999999999998776 8999999999876432221 12345679999999999875 678999
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCC
Q 002121 811 SDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPT 890 (964)
Q Consensus 811 sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs 890 (964)
+|||||||++|||++|+.||...... +............ ..+.. ......+.+++.+||+.||++||+
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~-------~~~~~----~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDA-DTISQVLNKKLCF-------ENPNY----NVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCT-------TSGGG----GGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChH-HHHHHHHhccccc-------CCccc----ccCCHHHHHHHHHHcCCChhHCCC
Confidence 99999999999999999999654332 2223322222110 01111 011245678999999999999999
Q ss_pred HHHHHH
Q 002121 891 MSEVVK 896 (964)
Q Consensus 891 ~~evl~ 896 (964)
+.|+++
T Consensus 325 ~~~~l~ 330 (345)
T 3hko_A 325 AMRALQ 330 (345)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999986
No 106
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=376.60 Aligned_cols=263 Identities=21% Similarity=0.245 Sum_probs=208.5
Q ss_pred ccHHHHHHhhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc---chhHHHHHHHHHHHhcCCCCccceeEEE
Q 002121 617 FSYDELKKCSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM---QGGLEFKTEIELLSRVHHKNLVGLVGFC 692 (964)
Q Consensus 617 ~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 692 (964)
+.+.+++...++|+..+.||+|+||+||+|+.+ +|+.||||+++.... .....+.+|++++.+++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 455666777889999999999999999999974 799999999875321 2234588999999999999999999999
Q ss_pred EeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeec
Q 002121 693 FEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADF 772 (964)
Q Consensus 693 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DF 772 (964)
.+.+..|+||||+++|+|.+++...+ ..+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeec
Confidence 99999999999999999999997532 36899999999999999999999988 999999999999999999999999
Q ss_pred ccceeecCCCCCceeecccccCcccCccccc-------cCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhc
Q 002121 773 GLSKLVSDSSKGHVSTQVKGTMGYLDPEYYM-------TQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMN 845 (964)
Q Consensus 773 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 845 (964)
|+++....... ......+||+.|+|||++. .+.++.++|||||||++|||++|+.||..... .+.+.....
T Consensus 207 Gla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-~~~~~~i~~ 284 (412)
T 2vd5_A 207 GSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST-AETYGKIVH 284 (412)
T ss_dssp TTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHT
T ss_pred hhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH-HHHHHHHHh
Confidence 99987654322 2233467999999999987 35789999999999999999999999965432 222222221
Q ss_pred cCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCC---CCHHHHHH
Q 002121 846 RDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDR---PTMSEVVK 896 (964)
Q Consensus 846 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~ 896 (964)
.... ..... .+..+ ...+.+++.+||. +|++| |+++|+++
T Consensus 285 ~~~~--~~~p~-~~~~~-------s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 285 YKEH--LSLPL-VDEGV-------PEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHH--CCCC-----CC-------CHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred cccC--cCCCc-cccCC-------CHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1100 00000 00111 1446689999999 99998 58988864
No 107
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=366.82 Aligned_cols=257 Identities=16% Similarity=0.193 Sum_probs=210.3
Q ss_pred HHhhcCCCccceeecCCcEEEEEEE------ecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcC---CCCccceeEEEE
Q 002121 623 KKCSNNFSESNEIGSGGYGKVYRGM------LSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVH---HKNLVGLVGFCF 693 (964)
Q Consensus 623 ~~~~~~~~~~~~lG~G~fg~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~ 693 (964)
....++|.+.+.||+|+||+||+|. ..+++.||||+++... ..++..|++++++++ |+||+++++++.
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 3445789999999999999999994 4568899999997543 346788888888886 999999999999
Q ss_pred eeCceEEEEEeccCCChhhhhcCC---CCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC-------
Q 002121 694 EQGEQMLVYEFMANGTLRESLSGR---SGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE------- 763 (964)
Q Consensus 694 ~~~~~~lV~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~------- 763 (964)
..+..++|||||++|+|.+++... ....++|.+++.++.||++||+|||+.+ ||||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccc
Confidence 999999999999999999999642 2346999999999999999999999988 999999999999998
Q ss_pred ----CCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHH
Q 002121 764 ----NLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVRE 839 (964)
Q Consensus 764 ----~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~ 839 (964)
++.+||+|||+|+...............||++|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--- 291 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG--- 291 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT---
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC---
Confidence 8999999999998765444445556678999999999999999999999999999999999999998532210
Q ss_pred HHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCC-CCHHHHHHHHHHHHHhC
Q 002121 840 VRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDR-PTMSEVVKAIETLLQND 905 (964)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~~~~~~ 905 (964)
.......+... . ....+.+++..|++.+|.+| |+++++.+.|+.++...
T Consensus 292 -----------~~~~~~~~~~~-~-----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 292 -----------ECKPEGLFRRL-P-----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp -----------EEEECSCCTTC-S-----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -----------ceeechhcccc-C-----cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 00011111111 1 12345688999999999998 78899999999988764
No 108
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=357.30 Aligned_cols=265 Identities=25% Similarity=0.336 Sum_probs=202.4
Q ss_pred hhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCc-----chhHHHHHHHHHHHhcC---CCCccceeEEEEee
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSM-----QGGLEFKTEIELLSRVH---HKNLVGLVGFCFEQ 695 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~ 695 (964)
..++|+..+.||+|+||+||+|+. .+|+.||||++..... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999995 5789999999864221 12346778888887775 99999999999875
Q ss_pred C-----ceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEe
Q 002121 696 G-----EQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVA 770 (964)
Q Consensus 696 ~-----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~ 770 (964)
. ..++||||++ |+|.+++.......+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEe
Confidence 5 4799999997 59999998776556999999999999999999999988 9999999999999999999999
Q ss_pred ecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhH--HHHHHHhccCc
Q 002121 771 DFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVV--REVRTAMNRDD 848 (964)
Q Consensus 771 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~ 848 (964)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+........
T Consensus 163 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 163 DFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239 (308)
T ss_dssp SCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999998654332 2345679999999999999999999999999999999999999996443221 22222221111
Q ss_pred ccccc----cc-----cccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 849 EEHYG----LT-----EMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 849 ~~~~~----~~-----~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..... .. ......+..........+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 11000 00 00000011111122356779999999999999999999975
No 109
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.3e-40 Score=367.12 Aligned_cols=268 Identities=25% Similarity=0.401 Sum_probs=214.3
Q ss_pred ccHHHHHHhhcCCCccceeecCCcEEEEEEEec------CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCcccee
Q 002121 617 FSYDELKKCSNNFSESNEIGSGGYGKVYRGMLS------DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLV 689 (964)
Q Consensus 617 ~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~ 689 (964)
+..++++...++|...+.||+|+||.||+|+.. +++.||||++..... ....++.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 444556667789999999999999999999854 368899999975433 3345689999999999999999999
Q ss_pred EEEEeeCceEEEEEeccCCChhhhhcCCC--------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE
Q 002121 690 GFCFEQGEQMLVYEFMANGTLRESLSGRS--------GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL 761 (964)
Q Consensus 690 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 761 (964)
+++.+.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEE
Confidence 99999999999999999999999986532 135789999999999999999999988 9999999999999
Q ss_pred CCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002121 762 DENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREV 840 (964)
Q Consensus 762 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 840 (964)
+.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||..... .+..
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~ 250 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-EQVL 250 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-HHHH
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-HHHH
Confidence 9999999999999986644322222233457889999999999999999999999999999999 8888864332 2222
Q ss_pred HHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 002121 841 RTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLL 902 (964)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 902 (964)
........ .. .... ....+.+++.+||+.||++||++.|+++.|+..+
T Consensus 251 ~~~~~~~~------~~-~~~~-------~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 251 RFVMEGGL------LD-KPDN-------CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp HHHHTTCC------CC-CCTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred HHHHcCCc------CC-CCCC-------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 22221111 00 0111 1244678999999999999999999999988764
No 110
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.2e-40 Score=369.52 Aligned_cols=262 Identities=26% Similarity=0.383 Sum_probs=208.7
Q ss_pred cCCCccceeecCCcEEEEEEEe-----cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEe--eCceE
Q 002121 627 NNFSESNEIGSGGYGKVYRGML-----SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFE--QGEQM 699 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~ 699 (964)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. .+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5788899999999999999984 3688999999987766666779999999999999999999999874 45689
Q ss_pred EEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeec
Q 002121 700 LVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVS 779 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 779 (964)
+||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999999997533 35899999999999999999999988 9999999999999999999999999998775
Q ss_pred CCCCCc-eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhH-------------HHHHHHhc
Q 002121 780 DSSKGH-VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVV-------------REVRTAMN 845 (964)
Q Consensus 780 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~-------------~~~~~~~~ 845 (964)
...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 433211 2233458888999999998889999999999999999999999986422110 01111111
Q ss_pred cCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 846 RDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 846 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
... .... .......+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 259 ~~~----------~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 259 EGQ----------RLPA---PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp TTC----------CCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred ccc----------CCCC---CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 100 0000 1112245779999999999999999999999999886544
No 111
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.6e-39 Score=357.93 Aligned_cols=264 Identities=22% Similarity=0.352 Sum_probs=200.9
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|...+.||+|+||.||+|.. .+|+.||||+++... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 45789999999999999999996 578999999987533 23345788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCC--CCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeec
Q 002121 702 YEFMANGTLRESLSGR--SGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVS 779 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 779 (964)
|||+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999998642 2346899999999999999999999988 9999999999999999999999999998664
Q ss_pred CCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccC
Q 002121 780 DSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 780 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.............+.... ......
T Consensus 188 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~ 260 (310)
T 2wqm_A 188 SKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD-----YPPLPS 260 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC-----SCCCCT
T ss_pred CCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc-----CCCCcc
Confidence 322 1223456899999999999999999999999999999999999999644322222222221111 110000
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCC
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDG 906 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 906 (964)
.. ....+.+++.+||+.||++||++.|+++.|+++.....
T Consensus 261 ~~-------~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 261 DH-------YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp TT-------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred cc-------cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 11 11456789999999999999999999999999886654
No 112
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-39 Score=351.79 Aligned_cols=263 Identities=25% Similarity=0.382 Sum_probs=210.3
Q ss_pred cCCCccc-eeecCCcEEEEEEEec---CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 627 NNFSESN-EIGSGGYGKVYRGMLS---DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 627 ~~~~~~~-~lG~G~fg~Vy~~~~~---~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
++|.+.+ .||+|+||.||+|... +++.||||+++.... ...+++.+|++++++++||||+++++++ +.+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4555555 8999999999999853 578899999986533 3456789999999999999999999999 56679999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++|+|.+++.... ..+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEeCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 99999999999997543 46999999999999999999999988 999999999999999999999999999877543
Q ss_pred CCCc-eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccC
Q 002121 782 SKGH-VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 782 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
.... ......||+.|+|||++.+..++.++||||||+++|||++ |+.||..... .+.......... ....
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~~~i~~~~~-------~~~~ 235 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-PEVMAFIEQGKR-------MECP 235 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-HHHHHHHHTTCC-------CCCC
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-HHHHHHHhcCCc-------CCCC
Confidence 2211 1223456899999999988889999999999999999999 9999964332 122222111111 0011
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCCCCC
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDGMNT 909 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 909 (964)
+.. ...+.+++.+||+.||++||++.|+++.|+.+......+.
T Consensus 236 ~~~-------~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 236 PEC-------PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp TTC-------CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred CCc-------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 111 2456789999999999999999999999999987765443
No 113
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.2e-40 Score=364.41 Aligned_cols=258 Identities=26% Similarity=0.412 Sum_probs=206.9
Q ss_pred CCccceeecCCcEEEEEEEec-----CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEee--CceEE
Q 002121 629 FSESNEIGSGGYGKVYRGMLS-----DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ--GEQML 700 (964)
Q Consensus 629 ~~~~~~lG~G~fg~Vy~~~~~-----~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~l 700 (964)
|+..+.||+|+||+||++.+. +|+.||||+++.... .....+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998753 688999999986543 3345789999999999999999999999884 56799
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
||||+++|+|.+++... .+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 113 v~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 99999999999999765 3899999999999999999999988 99999999999999999999999999988754
Q ss_pred CCCC-ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhH-------------HHHHHHhcc
Q 002121 781 SSKG-HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVV-------------REVRTAMNR 846 (964)
Q Consensus 781 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~-------------~~~~~~~~~ 846 (964)
.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..+......
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 3321 12234568889999999998899999999999999999999999986432111 011111111
Q ss_pred CcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 847 DDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 847 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
.. .... .......+.+++.+||+.||++|||+.|+++.|+.+.++.
T Consensus 267 ~~----------~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 267 GE----------RLPR---PDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp TC----------CCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cc----------CCCC---CccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 10 0000 0111245779999999999999999999999999987654
No 114
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5e-40 Score=366.92 Aligned_cols=247 Identities=22% Similarity=0.342 Sum_probs=200.1
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|.+.+.||+|+||+||+|+. .+|+.||||++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 36788999999999999999996 578999999986432 12234789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+ +|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 88 ~E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp ECCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 9999 689999886543 5899999999999999999999998 999999999999999999999999999865443
Q ss_pred CCCceeecccccCcccCccccccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
. ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .......... .
T Consensus 162 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-----~~~~~i~~~~--------~ 225 (336)
T 3h4j_B 162 N---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-----NLFKKVNSCV--------Y 225 (336)
T ss_dssp B---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-----TCBCCCCSSC--------C
T ss_pred c---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-----HHHHHHHcCC--------C
Confidence 2 2234579999999999988776 68999999999999999999999642210 0000000000 0
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
.++. .....+.+++.+||+.||.+|||++|+++.
T Consensus 226 ~~p~---~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 226 VMPD---FLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCT---TSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCcc---cCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 1111 112446689999999999999999999864
No 115
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.3e-40 Score=356.35 Aligned_cols=250 Identities=26% Similarity=0.475 Sum_probs=206.4
Q ss_pred hhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEe---------
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFE--------- 694 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--------- 694 (964)
..++|+..+.||+|+||.||+|... +|+.||+|+++... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3457889999999999999999975 79999999987543 357899999999999999999999865
Q ss_pred -------eCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcE
Q 002121 695 -------QGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTA 767 (964)
Q Consensus 695 -------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~ 767 (964)
....++||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCE
Confidence 445799999999999999997654457999999999999999999999988 9999999999999999999
Q ss_pred EEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccC
Q 002121 768 KVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRD 847 (964)
Q Consensus 768 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 847 (964)
||+|||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|..|+........ . ....
T Consensus 162 kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~-~~~~ 234 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFT---D-LRDG 234 (284)
T ss_dssp EECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHH---H-HHTT
T ss_pred EECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHH---H-hhcc
Confidence 9999999987654322 2345699999999999999999999999999999999999988743221111 1 1111
Q ss_pred cccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 848 DEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 848 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
. ....++ ..+.+++.+||+.||++||++.|+++.|+.+.+.
T Consensus 235 ~-----~~~~~~-----------~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 235 I-----ISDIFD-----------KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp C-----CCTTSC-----------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred c-----ccccCC-----------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 1 111111 3456899999999999999999999999987543
No 116
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.7e-39 Score=363.53 Aligned_cols=244 Identities=20% Similarity=0.290 Sum_probs=203.4
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
++|...+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999965 68999999986432 123456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999997643 5899999999999999999999988 999999999999999999999999999876432
Q ss_pred CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTI 862 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (964)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+........... ....+
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-~~~~~~~i~~~~~~----~p~~~---- 261 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-PIQIYEKIVSGKVR----FPSHF---- 261 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCCC----CCTTC----
T ss_pred ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC-HHHHHHHHHcCCCC----CCCCC----
Confidence 234579999999999999999999999999999999999999997543 22333332222111 11111
Q ss_pred hhhhHHHHHHHHHHHHHhhhcCCCCCCC-----HHHHHH
Q 002121 863 RNTVLLGFRRYLELALQCVEESATDRPT-----MSEVVK 896 (964)
Q Consensus 863 ~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 896 (964)
...+.+++.+||+.||++||+ ++|+++
T Consensus 262 -------~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 262 -------SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -------CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -------CHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 134668999999999999998 788764
No 117
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.6e-39 Score=350.37 Aligned_cols=245 Identities=23% Similarity=0.374 Sum_probs=180.8
Q ss_pred cCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCc---chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSM---QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
++|+..+.||+|+||.||+|+. .+|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5789999999999999999995 5789999999875432 23457889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+ +++|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 93 e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 999 678888887653 5899999999999999999999988 9999999999999999999999999998664432
Q ss_pred CCceeecccccCcccCccccccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ............ .....+
T Consensus 167 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~----~~~~~~-- 236 (275)
T 2eue_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNISNGVYT----LPKFLS-- 236 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC----CCTTSC--
T ss_pred ---cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCC----CCccCC--
Confidence 2234569999999999987765 78999999999999999999999754322 222222111110 111111
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..+.+++.+||+.||++|||+.|+++
T Consensus 237 ---------~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 237 ---------PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---------HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---------HHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 34568999999999999999999975
No 118
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.2e-39 Score=364.49 Aligned_cols=267 Identities=24% Similarity=0.383 Sum_probs=214.1
Q ss_pred HHHhhcCCCccceeecCCcEEEEEEEecC-C-----cEEEEEEecCCCc-chhHHHHHHHHHHHhc-CCCCccceeEEEE
Q 002121 622 LKKCSNNFSESNEIGSGGYGKVYRGMLSD-G-----QVVAIKRAQQGSM-QGGLEFKTEIELLSRV-HHKNLVGLVGFCF 693 (964)
Q Consensus 622 l~~~~~~~~~~~~lG~G~fg~Vy~~~~~~-g-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~ 693 (964)
++...++|...+.||+|+||.||+|.... + ..||+|+++.... .....+.+|+++++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 34456789999999999999999999642 2 4899999976543 3345789999999999 8999999999999
Q ss_pred eeCceEEEEEeccCCChhhhhcCCC------------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE
Q 002121 694 EQGEQMLVYEFMANGTLRESLSGRS------------GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL 761 (964)
Q Consensus 694 ~~~~~~lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 761 (964)
+.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEE
Confidence 9999999999999999999986432 235799999999999999999999988 9999999999999
Q ss_pred CCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002121 762 DENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREV 840 (964)
Q Consensus 762 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~ 840 (964)
+.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+| |..||........ +
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~ 276 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-F 276 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-H
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-H
Confidence 9999999999999987655443333445567889999999999999999999999999999999 8899864332211 1
Q ss_pred HHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 841 RTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
......... ...... ....+.+++.+||+.||++||++.|+++.|+.+.+..
T Consensus 277 ~~~~~~~~~------~~~~~~-------~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 277 YKLVKDGYQ------MAQPAF-------APKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HHHHHHTCC------CCCCTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCC------CCCCCC-------CCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 111111110 000000 1145678999999999999999999999999887643
No 119
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.3e-39 Score=368.70 Aligned_cols=251 Identities=21% Similarity=0.346 Sum_probs=199.5
Q ss_pred cCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCc--chhHHHHHHHHHHHhcC--CCCccceeEEEEeeCceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVH--HKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~lV~ 702 (964)
++|.+.+.||+|+||+||+|...+|+.||||++..... .....+.+|++++++++ |||||++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 45889999999999999999988899999999875433 33467899999999996 599999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
| +.+|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 67889999998654 6889999999999999999999988 99999999999996 5899999999998765433
Q ss_pred CCceeecccccCcccCcccccc-----------CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMT-----------QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEH 851 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 851 (964)
.........||+.|+|||++.. ..++.++|||||||++|||++|+.||.........+..........
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~- 287 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI- 287 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCC-
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccC-
Confidence 3223345679999999999864 4688999999999999999999999975444334444333222110
Q ss_pred cccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 852 YGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 852 ~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
...... ...+.+++.+||+.||++||++.|+++.
T Consensus 288 -~~~~~~-----------~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 288 -EFPDIP-----------EKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp -CCCCCS-----------CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -CCCccc-----------hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 011111 1346689999999999999999999864
No 120
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=367.68 Aligned_cols=268 Identities=16% Similarity=0.204 Sum_probs=208.9
Q ss_pred cCCCccceeecCCcEEEEEEEecC---------CcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccc----------
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLSD---------GQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVG---------- 687 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~---------- 687 (964)
++|...+.||+|+||.||+|+... ++.||||++... ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578899999999999999999753 789999998754 36889999999999999988
Q ss_pred -----eeEEEEe-eCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE
Q 002121 688 -----LVGFCFE-QGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL 761 (964)
Q Consensus 688 -----l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 761 (964)
+++++.. .+..++||||+ +|+|.+++.......+++.+++.++.|++.||+|||+.+ |+||||||+|||+
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEE
Confidence 6777776 67789999999 999999998654457999999999999999999999988 9999999999999
Q ss_pred CCCC--cEEEeecccceeecCCCCC-----ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc
Q 002121 762 DENL--TAKVADFGLSKLVSDSSKG-----HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGK 834 (964)
Q Consensus 762 ~~~~--~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~ 834 (964)
+.++ .+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 9999999999876432211 11234579999999999999899999999999999999999999997543
Q ss_pred hhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCCCC
Q 002121 835 YVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDGMN 908 (964)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 908 (964)
.....+.......... .....+.... .......+.+++.+||+.||++||++.|+++.|+.++++.+..
T Consensus 273 ~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 273 PNTEDIMKQKQKFVDK---PGPFVGPCGH--WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp TCHHHHHHHHHHHHHS---CCCEECTTSC--EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHhccCC---hhhhhhhccc--cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 1122221111100000 0111110000 0001145678999999999999999999999999999887543
No 121
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.3e-39 Score=376.15 Aligned_cols=360 Identities=19% Similarity=0.191 Sum_probs=299.4
Q ss_pred CCcc--EEecC----------CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCC-CCCCCCcccchhhccc
Q 002121 55 SWEG--VTCNN----------SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSL-SPRIGDLQKLNILILA 121 (964)
Q Consensus 55 ~w~g--v~C~~----------~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~-p~~l~~l~~L~~L~L~ 121 (964)
.|.+ |.|+. .+++.|+|++|.+++..|..|+++++|++|+|++| .+.+.+ +..|.++++|++|+|+
T Consensus 9 ~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n-~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 9 SVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQ-TPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp EEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCC-STTCEECTTTTTTCTTCCEEECT
T ss_pred EEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCC-cccceECcccccccccCCEEeCC
Confidence 5555 88874 46899999999999988999999999999999999 677665 5679999999999999
Q ss_pred cccccCcCCcccCCCCCccEEEcccCcccCcCCCc--CCCccccccccccccccccccCcccCCCCccccccCCCeeEcc
Q 002121 122 GCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPS--LGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFN 199 (964)
Q Consensus 122 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~ 199 (964)
+|.+++..|..|+++++|++|+|++|++++.+|.. |.++++|++|+|++|++++..|.. .+..+++|++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-----~~~~l~~L~~L~L~ 162 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS-----FFLNMRRFHVLDLT 162 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG-----GGGGCTTCCEEECT
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccc-----ccCCCCcccEEeCC
Confidence 99999888999999999999999999999855544 999999999999999999665621 37889999999999
Q ss_pred CCcccccccccccC-CCcceeEEEccCCcCcccCCccc--------CCCCCCcEEEcccCcCccccCccccC--------
Q 002121 200 KNKLSGTISEQLFS-PDMVLIHVLFDGNQLSGNIPESL--------GYVQTLEVLRLDRNALTGKVPTNLNN-------- 262 (964)
Q Consensus 200 ~N~l~g~l~~~~f~-~~~~L~~L~l~~N~l~~~~p~~~--------~~l~~L~~L~Ls~N~l~~~~p~~~~~-------- 262 (964)
+|++++..+..+.. ....|+.|++++|.+.+..+..+ ..+++|+.|++++|++++..|..+..
T Consensus 163 ~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~ 242 (455)
T 3v47_A 163 FNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQ 242 (455)
T ss_dssp TCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEE
T ss_pred CCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhcccccccee
Confidence 99999666654422 12578888888888876555432 35577888888888777655544322
Q ss_pred -------------------------------CCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCC
Q 002121 263 -------------------------------LTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFST 310 (964)
Q Consensus 263 -------------------------------l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 310 (964)
.++|+.|+|++|.+++.++. +..+++|++|+|++|.++ ...+..|.+
T Consensus 243 ~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~ 321 (455)
T 3v47_A 243 SLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWG 321 (455)
T ss_dssp EEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCC-EECTTTTTT
T ss_pred eEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCccc-ccChhHhcC
Confidence 26899999999999998775 899999999999999998 677888999
Q ss_pred CCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCC---CcccceeE
Q 002121 311 LPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGS---GIKNYTLI 387 (964)
Q Consensus 311 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~---~~~l~~l~ 387 (964)
+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+|+.++... ...++.|+
T Consensus 322 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 401 (455)
T 3v47_A 322 LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIW 401 (455)
T ss_dssp CTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999998643 45588999
Q ss_pred eecCC-ccccc-ccccCccccCCCCCcccccccccCCCC
Q 002121 388 LVGNP-VCTAT-LANTNYCQLQQPTTKAYSTSLANCGGK 424 (964)
Q Consensus 388 l~~Np-~c~~~-l~~~~~~~~~~~~~~~~~~~~~~c~~~ 424 (964)
|.+|| .|+|. +.++..|...... .......|.++
T Consensus 402 l~~N~l~~~~~~~~~l~~~l~~~~~---~~~~~~~c~~~ 437 (455)
T 3v47_A 402 LHTNPWDCSCPRIDYLSRWLNKNSQ---KEQGSAKCSGS 437 (455)
T ss_dssp CCSSCBCCCTTTTHHHHHHHHHTTT---TEESCCBBTTT
T ss_pred ccCCCcccCCCcchHHHHHHHhCcc---ceeeeeeecCC
Confidence 99999 89997 6677777433222 12233456654
No 122
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=366.23 Aligned_cols=247 Identities=23% Similarity=0.330 Sum_probs=201.0
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
++|...+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57888999999999999999964 68999999986432 223456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 95 e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp CCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred ecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999998653 6899999999999999999999988 9999999999999999999999999998765432
Q ss_pred CCceeecccccCcccCcccccc---CCCCCchhHHHHHHHHHHHHhCCCCCCCC--chhHHHHHHHhccCcccccccccc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMT---QQLTEKSDVYSFGVVMLELITAKQPIEKG--KYVVREVRTAMNRDDEEHYGLTEM 857 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~S~Gvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 857 (964)
......||+.|+|||++.. ..++.++|||||||++|||++|+.||... ......+......... ...
T Consensus 170 ---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~----~p~- 241 (384)
T 4fr4_A 170 ---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT----YPS- 241 (384)
T ss_dssp ---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC----CCT-
T ss_pred ---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC----CCC-
Confidence 2345679999999999864 45899999999999999999999999632 2222222221111110 111
Q ss_pred cCccchhhhHHHHHHHHHHHHHhhhcCCCCCCC-HHHHHH
Q 002121 858 MDPTIRNTVLLGFRRYLELALQCVEESATDRPT-MSEVVK 896 (964)
Q Consensus 858 ~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 896 (964)
.+ ...+.+++.+||+.||++||+ ++++.+
T Consensus 242 ---~~-------s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 242 ---AW-------SQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ---TS-------CHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ---cC-------CHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 11 145678999999999999998 666653
No 123
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=6.7e-39 Score=356.59 Aligned_cols=251 Identities=21% Similarity=0.308 Sum_probs=205.9
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc------hhHHHHHHHHHHHhcCCCCccceeEEEEeeCce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ------GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQ 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 698 (964)
.++|...+.||+|+||.||+|+.. +|+.||||+++..... ..+++.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 457888999999999999999965 6899999998754322 246799999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC----cEEEeeccc
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL----TAKVADFGL 774 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~DFGl 774 (964)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 99999999999999997643 6899999999999999999999988 99999999999999888 799999999
Q ss_pred ceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccc
Q 002121 775 SKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGL 854 (964)
Q Consensus 775 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (964)
++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+..........
T Consensus 166 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~------ 235 (321)
T 2a2a_A 166 AHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANITSVSY------ 235 (321)
T ss_dssp CEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHTTCC------
T ss_pred ceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhccc------
Confidence 987654322 2345699999999999999999999999999999999999999964332 222222221111
Q ss_pred ccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 855 TEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 855 ~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..++.... .....+.+++.+||+.||++|||+.|+++
T Consensus 236 --~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 --DFDEEFFS---HTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --CCCHHHHT---TCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --ccChhhhc---ccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 01111111 11245678999999999999999999975
No 124
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.4e-39 Score=356.91 Aligned_cols=261 Identities=21% Similarity=0.295 Sum_probs=200.3
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc---hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ---GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|...+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++++++||||+++++++.+++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999964 6899999998754322 235788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++++|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999997543 5899999999999999999999988 999999999999999999999999999876443
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
.. .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .+...+...... .....+.
T Consensus 188 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~----~~~~~~~ 260 (309)
T 2h34_A 188 KL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPR----PSTVRPG 260 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCC----GGGTSTT
T ss_pred cc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCC----ccccCCC
Confidence 21 2223456999999999999999999999999999999999999999754322 222222221110 0011111
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCC-CHHHHHHHHHHHHHhC
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRP-TMSEVVKAIETLLQND 905 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~ 905 (964)
+ ...+.+++.+||+.||++|| +++++++.|+..+...
T Consensus 261 ~-------~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 261 I-------PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp C-------CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred C-------CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 1 13466899999999999999 9999999998875443
No 125
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.5e-39 Score=362.01 Aligned_cols=244 Identities=21% Similarity=0.306 Sum_probs=197.5
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc---chhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM---QGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 701 (964)
++|...+.||+|+||+||+|+.. +|+.||+|+++.... .....+.+|+.++.++ +|||||++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888999999999999999965 689999999975432 2234578999999988 899999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 ~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999997543 5899999999999999999999988 999999999999999999999999999864322
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc-------hhHHHHHHHhccCccccccc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGK-------YVVREVRTAMNRDDEEHYGL 854 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~ 854 (964)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .....+...+.... ...
T Consensus 164 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~---~~~ 238 (345)
T 3a8x_A 164 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ---IRI 238 (345)
T ss_dssp T--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC---CCC
T ss_pred C--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC---CCC
Confidence 2 22345679999999999999999999999999999999999999996311 11111211111111 001
Q ss_pred ccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCH
Q 002121 855 TEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTM 891 (964)
Q Consensus 855 ~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 891 (964)
.. .+ ...+.+++.+||+.||++||++
T Consensus 239 p~----~~-------s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 239 PR----SL-------SVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CT----TS-------CHHHHHHHHHHTCSSTTTSTTC
T ss_pred CC----CC-------CHHHHHHHHHHhcCCHhHCCCC
Confidence 11 11 1346689999999999999996
No 126
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5.3e-39 Score=349.36 Aligned_cols=250 Identities=22% Similarity=0.270 Sum_probs=204.6
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEe
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
.++|...+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 457889999999999999999965 5789999999876556667899999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE---CCCCcEEEeecccceeecCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL---DENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DFGla~~~~~~ 781 (964)
+++++|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 88 CTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 99999999887543 5899999999999999999999988 9999999999999 88899999999999876543
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
. ......||+.|+|||++.+ .++.++||||||+++|||++|+.||...... +........... . ...
T Consensus 163 ~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~----~----~~~ 229 (277)
T 3f3z_A 163 K---MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS-EVMLKIREGTFT----F----PEK 229 (277)
T ss_dssp S---CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCC----C----CHH
T ss_pred c---chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCC----C----Cch
Confidence 2 2234569999999998865 4899999999999999999999999754322 222222111110 0 000
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
. .......+.+++.+||+.||++||++.|+++
T Consensus 230 ~---~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 230 D---WLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp H---HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred h---hhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0011245678999999999999999999985
No 127
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.6e-39 Score=369.95 Aligned_cols=204 Identities=20% Similarity=0.288 Sum_probs=177.3
Q ss_pred hcCCCccceeecC--CcEEEEEEEec-CCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEE
Q 002121 626 SNNFSESNEIGSG--GYGKVYRGMLS-DGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 626 ~~~~~~~~~lG~G--~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
.++|++.+.||+| +||+||+|+.. +|+.||||+++.... .....+.+|++++++++|||||++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3578889999999 99999999975 799999999875432 234568899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
|||||++|+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999998765456999999999999999999999988 99999999999999999999999999875432
Q ss_pred CCC-----CceeecccccCcccCcccccc--CCCCCchhHHHHHHHHHHHHhCCCCCCC
Q 002121 781 SSK-----GHVSTQVKGTMGYLDPEYYMT--QQLTEKSDVYSFGVVMLELITAKQPIEK 832 (964)
Q Consensus 781 ~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~S~Gvvl~elltg~~p~~~ 832 (964)
... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 239 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 211 111223468999999999987 6799999999999999999999999964
No 128
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.9e-39 Score=358.04 Aligned_cols=267 Identities=26% Similarity=0.373 Sum_probs=199.9
Q ss_pred HHHHhhcCCCccceeecCCcEEEEEEEec----CCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002121 621 ELKKCSNNFSESNEIGSGGYGKVYRGMLS----DGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFE 694 (964)
Q Consensus 621 el~~~~~~~~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 694 (964)
++....++|...+.||+|+||.||+|... .++.||||+++.... ...+.+.+|++++++++||||+++++++.+
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence 33344568888999999999999999854 345899999875433 234568999999999999999999999987
Q ss_pred eC-----ceEEEEEeccCCChhhhhcCC----CCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC
Q 002121 695 QG-----EQMLVYEFMANGTLRESLSGR----SGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL 765 (964)
Q Consensus 695 ~~-----~~~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~ 765 (964)
.+ ..++||||+++|+|.+++... ....+++.+++.++.|+++||+|||+.+ |+||||||+||+++.++
T Consensus 108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTS
T ss_pred ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCC
Confidence 55 349999999999999998432 2346999999999999999999999988 99999999999999999
Q ss_pred cEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHh
Q 002121 766 TAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAM 844 (964)
Q Consensus 766 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~ 844 (964)
.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .......
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~ 263 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-EMYDYLL 263 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHH
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-HHHHHHH
Confidence 999999999987654433233344567889999999999999999999999999999999 88888643321 1111111
Q ss_pred ccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 845 NRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 845 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
..... ... . .....+.+++.+||+.||++||++.|+++.|+.+++.-
T Consensus 264 ~~~~~---~~~----~-------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 264 HGHRL---KQP----E-------DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp TTCCC---CCB----T-------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCCC---CCC----c-------cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 11110 000 1 11245678999999999999999999999999988653
No 129
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.9e-39 Score=363.37 Aligned_cols=248 Identities=21% Similarity=0.261 Sum_probs=202.8
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 700 (964)
.++|...+.||+|+||+||+|+.. +|+.||||+++... ......+..|.+++..+ +||||+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 468999999999999999999975 58899999987532 22345678999999988 79999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
||||+++|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 99 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999997543 5899999999999999999999988 99999999999999999999999999986432
Q ss_pred CCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 781 SSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 781 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+........... ....+
T Consensus 174 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-~~~~~~~i~~~~~~----~p~~~-- 244 (353)
T 2i0e_A 174 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSIMEHNVA----YPKSM-- 244 (353)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCCC----CCTTS--
T ss_pred CC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC-HHHHHHHHHhCCCC----CCCCC--
Confidence 22 22345679999999999999999999999999999999999999996432 22333333322211 11111
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCC-----HHHHHH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPT-----MSEVVK 896 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 896 (964)
...+.+++.+||+.||++||+ ++|+++
T Consensus 245 ---------s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 245 ---------SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp ---------CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred ---------CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 134668999999999999996 466654
No 130
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=360.14 Aligned_cols=258 Identities=24% Similarity=0.436 Sum_probs=198.9
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCc----EEEEEEecCCC-cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQ----VVAIKRAQQGS-MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQM 699 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 699 (964)
.++|+..+.||+|+||+||+|+.. +++ +||+|.+.... .....++.+|+.++++++||||+++++++.+. ..+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-Cce
Confidence 357889999999999999999953 454 35778776433 33456799999999999999999999999865 488
Q ss_pred EEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeec
Q 002121 700 LVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVS 779 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 779 (964)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 9999999999999997653 36899999999999999999999988 9999999999999999999999999998765
Q ss_pred CCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCccccccccccc
Q 002121 780 DSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 780 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
............||+.|+|||++.+..++.++|||||||++|||++ |+.||....... +...+..... . ..
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~~----~--~~ 240 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGER----L--PQ 240 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCC----C--CC
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCC----C--CC
Confidence 4433333344567889999999999999999999999999999999 999996432211 1111111110 0 00
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHH
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQ 903 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 903 (964)
.+. ....+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 241 ~~~-------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 241 PPI-------CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CTT-------BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred Ccc-------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 111 11346789999999999999999999999999874
No 131
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.5e-39 Score=353.86 Aligned_cols=260 Identities=29% Similarity=0.430 Sum_probs=203.2
Q ss_pred cCCCccceeecCCcEEEEEEEecC----CcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEe-eCceEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLSD----GQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFE-QGEQML 700 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~l 700 (964)
.+|...+.||+|+||+||+|...+ +..||+|++..... ...+.+.+|++++++++||||+++++++.+ ++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 467788999999999999998642 23689999876443 334578999999999999999999999754 567899
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
||||+++|+|.+++.... ..+++.+++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999997643 46899999999999999999999988 99999999999999999999999999986643
Q ss_pred CCC--CceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCC-CCCCCCchhHHHHHHHhccCcccccccccc
Q 002121 781 SSK--GHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAK-QPIEKGKYVVREVRTAMNRDDEEHYGLTEM 857 (964)
Q Consensus 781 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (964)
... ........||+.|+|||.+.+..++.++||||||+++|||++|. +||.. ....+........... .
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~ 252 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-VNTFDITVYLLQGRRL-------L 252 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-SCTTTHHHHHHTTCCC-------C
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc-CCHHHHHHHHhcCCCC-------C
Confidence 221 11233456788999999999999999999999999999999954 45542 2222222222111110 0
Q ss_pred cCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 858 MDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 858 ~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
..... ...+.+++.+||+.||++||++.|+++.|++++...
T Consensus 253 ~~~~~-------~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 253 QPEYC-------PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp CCTTC-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred CCccC-------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 00111 135678999999999999999999999999998754
No 132
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-39 Score=351.55 Aligned_cols=260 Identities=27% Similarity=0.359 Sum_probs=205.8
Q ss_pred CCCccceeecCCcEEEEEEEec-CC---cEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCce-EEE
Q 002121 628 NFSESNEIGSGGYGKVYRGMLS-DG---QVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQ-MLV 701 (964)
Q Consensus 628 ~~~~~~~lG~G~fg~Vy~~~~~-~g---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~-~lV 701 (964)
.|...+.||+|+||+||+|... ++ ..||+|++..... ...+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4555689999999999999853 33 3799999876443 3346789999999999999999999999876655 999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+.+|+|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 99999999999997643 46899999999999999999999988 999999999999999999999999999865332
Q ss_pred C--CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccC
Q 002121 782 S--KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 782 ~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
. .........+|+.|+|||.+.+..++.++||||||+++|||++|..|+.......+............ ...
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~--- 251 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP---QPE--- 251 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC---CCT---
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCC---CCc---
Confidence 1 11122345688999999999999999999999999999999997666543333222222211111100 000
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
. ....+.+++.+||+.||++|||+.|+++.|+++++..
T Consensus 252 -~-------~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 252 -Y-------CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp -T-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -c-------chHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 1 1145678999999999999999999999999998765
No 133
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.3e-39 Score=357.45 Aligned_cols=265 Identities=23% Similarity=0.370 Sum_probs=190.0
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
.++|+..+.||+|+||+||+|... +|+.||||+++.... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 357888999999999999999964 689999999875433 234578899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCC----CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeec
Q 002121 704 FMANGTLRESLSGRS----GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVS 779 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 779 (964)
|++ |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999886431 235899999999999999999999988 9999999999999999999999999998764
Q ss_pred CCCCCceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchh--HHHHHHHhccCcccccc-cc
Q 002121 780 DSSKGHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYV--VREVRTAMNRDDEEHYG-LT 855 (964)
Q Consensus 780 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~-~~ 855 (964)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+............. ..
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 3321 2234568999999999876 46899999999999999999999999754322 12222222111110000 00
Q ss_pred c--ccCc--------cchhh-----hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 856 E--MMDP--------TIRNT-----VLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 856 ~--~~d~--------~l~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
. ...+ .+... .......+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 0000 00000 0011245779999999999999999999975
No 134
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.7e-39 Score=358.35 Aligned_cols=268 Identities=27% Similarity=0.415 Sum_probs=199.9
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHH--HHhcCCCCccceeEEEEee-----Cce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIEL--LSRVHHKNLVGLVGFCFEQ-----GEQ 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~~-----~~~ 698 (964)
.++|...+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++... ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 35788899999999999999987 68999999986432 2344445554 4458999999999876542 256
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcC------CCCeeccCCCCCcEEECCCCcEEEeec
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELA------NPPIIHRDVKSTNILLDENLTAKVADF 772 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivH~Dlk~~NILl~~~~~~kl~DF 772 (964)
++||||+++|+|.+++.... .++..+..++.|+++||+|||+.. .++|+||||||+|||++.++.+||+||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred EEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 89999999999999997653 689999999999999999999881 113999999999999999999999999
Q ss_pred ccceeecCCCC------CceeecccccCcccCcccccc-------CCCCCchhHHHHHHHHHHHHhCCCCCCCCchh---
Q 002121 773 GLSKLVSDSSK------GHVSTQVKGTMGYLDPEYYMT-------QQLTEKSDVYSFGVVMLELITAKQPIEKGKYV--- 836 (964)
Q Consensus 773 Gla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~--- 836 (964)
|+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.|+..+...
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 99987653221 112234569999999999876 45678999999999999999998877533211
Q ss_pred -------------HHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHH
Q 002121 837 -------------VREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQ 903 (964)
Q Consensus 837 -------------~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 903 (964)
............ ....+.... .........+.+++.+||+.||++|||++|+++.|+.++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREK-----QRPKFPEAW-KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSC-----CCCCCCTTC-CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhhhcccCCCchHHHHHhhhcccc-----cCCCCCccc-ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 111111111111 000011111 1122344568899999999999999999999999999997
Q ss_pred hCC
Q 002121 904 NDG 906 (964)
Q Consensus 904 ~~~ 906 (964)
...
T Consensus 319 ~~~ 321 (336)
T 3g2f_A 319 IWE 321 (336)
T ss_dssp CCC
T ss_pred HHH
Confidence 654
No 135
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.7e-38 Score=356.42 Aligned_cols=267 Identities=26% Similarity=0.421 Sum_probs=211.9
Q ss_pred HHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHh--cCCCCccceeEEEEeeC---
Q 002121 622 LKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSR--VHHKNLVGLVGFCFEQG--- 696 (964)
Q Consensus 622 l~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~--- 696 (964)
-....++|...+.||+|+||.||+|+. +|+.||||++... ....+.+|++++.. ++||||+++++++...+
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 344567899999999999999999998 5899999998643 34567889999988 78999999999998876
Q ss_pred -ceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHh--------hcCCCCeeccCCCCCcEEECCCCcE
Q 002121 697 -EQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLH--------ELANPPIIHRDVKSTNILLDENLTA 767 (964)
Q Consensus 697 -~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dlk~~NILl~~~~~~ 767 (964)
..++||||+++|+|.+++... .+++.+++.++.|++.||+||| +.+ |+||||||+|||++.++.+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCE
T ss_pred ceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCE
Confidence 789999999999999999754 5899999999999999999999 666 9999999999999999999
Q ss_pred EEeecccceeecCCCCCc--eeecccccCcccCccccccC------CCCCchhHHHHHHHHHHHHhC----------CCC
Q 002121 768 KVADFGLSKLVSDSSKGH--VSTQVKGTMGYLDPEYYMTQ------QLTEKSDVYSFGVVMLELITA----------KQP 829 (964)
Q Consensus 768 kl~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~S~Gvvl~elltg----------~~p 829 (964)
||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||+|| ..|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 999999998775543211 12345799999999998765 234789999999999999999 678
Q ss_pred CCCCc---hhHHHHHHHhccCcccccccccccCccchhh--hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 830 IEKGK---YVVREVRTAMNRDDEEHYGLTEMMDPTIRNT--VLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 830 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
|.... .....+........ ..+.+... .......+.+++.+||+.||++||++.||++.|+.+.++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCEQK---------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSC---------CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccccCcCcccHHHHHHHHHHHH---------hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 75321 11222222221111 11222211 234456788999999999999999999999999999887
Q ss_pred CCC
Q 002121 905 DGM 907 (964)
Q Consensus 905 ~~~ 907 (964)
.+.
T Consensus 338 ~~~ 340 (342)
T 1b6c_B 338 EGI 340 (342)
T ss_dssp TC-
T ss_pred hcC
Confidence 653
No 136
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5e-39 Score=350.37 Aligned_cols=256 Identities=24% Similarity=0.398 Sum_probs=203.3
Q ss_pred hcCCCccceeecCCcEEEEEEEecC----CcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSD----GQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
.++|...+.||+|+||+||+|+... +..||||+++.... ...+.+.+|++++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678889999999999999998643 34699999876533 345679999999999999999999999864 56789
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
||||+++|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 90 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999997543 35899999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCch--hHHHHHHHhccCcccccccccc
Q 002121 781 SSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKY--VVREVRTAMNRDDEEHYGLTEM 857 (964)
Q Consensus 781 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 857 (964)
... .......+|+.|+|||++....++.++||||||+++|||++ |+.||..... ....+.. .... .....
T Consensus 166 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~---~~~~---~~~~~ 238 (281)
T 3cc6_A 166 EDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDRL---PKPDL 238 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH---TCCC---CCCTT
T ss_pred ccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc---CCCC---CCCCC
Confidence 322 22234457889999999998899999999999999999998 9999963322 2221111 1100 01111
Q ss_pred cCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 858 MDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 858 ~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
....+.+++.+||+.||++||++.|+++.|+.+.+.
T Consensus 239 -----------~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 239 -----------CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp -----------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----------CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 114467899999999999999999999999988754
No 137
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6.4e-39 Score=348.32 Aligned_cols=253 Identities=24% Similarity=0.376 Sum_probs=204.6
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC-cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS-MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
.++|+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 357888999999999999999975 78999999986433 2334678999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 783 (964)
|+++|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred ecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999999764 36899999999999999999999988 99999999999999999999999999987643322
Q ss_pred CceeecccccCcccCccccccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccc
Q 002121 784 GHVSTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTI 862 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (964)
........||+.|+|||++.+..+ +.++||||||+++|||++|+.||................... .. ..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------~~-~~ 231 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--------LN-PW 231 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--------ST-TG
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--------cC-ch
Confidence 222344579999999999987665 689999999999999999999997543322222222111110 00 00
Q ss_pred hhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 863 RNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 863 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
......+.+++.+||+.||++|||+.|+++
T Consensus 232 ----~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 232 ----KKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ----GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----hhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 011244668999999999999999999875
No 138
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.6e-39 Score=351.94 Aligned_cols=260 Identities=25% Similarity=0.382 Sum_probs=205.5
Q ss_pred hhcCCCccc-eeecCCcEEEEEEEe---cCCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCCCCccceeEEEEeeCce
Q 002121 625 CSNNFSESN-EIGSGGYGKVYRGML---SDGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQ 698 (964)
Q Consensus 625 ~~~~~~~~~-~lG~G~fg~Vy~~~~---~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 698 (964)
..++|...+ .||+|+||+||+|.+ ..++.||||+++..... ..+++.+|++++++++||||+++++++ +.+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 345677777 999999999999964 34689999998764322 246799999999999999999999999 66788
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
++||||+++|+|.+++.... .+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 99999999999999997643 5899999999999999999999988 999999999999999999999999999876
Q ss_pred cCCCCCc-eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCccccccccc
Q 002121 779 SDSSKGH-VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTE 856 (964)
Q Consensus 779 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (964)
....... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... .+ +...+..... .
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~-~~~~~~~~~~-----~- 239 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-SE-VTAMLEKGER-----M- 239 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HH-HHHHHHTTCC-----C-
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH-HH-HHHHHHcCCC-----C-
Confidence 5433211 1223346789999999988889999999999999999999 9999975332 11 2222211110 0
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 857 MMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 857 ~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
..... ....+.+++.+||+.||++||++.|+++.|+.+..+.
T Consensus 240 ~~~~~-------~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 240 GCPAG-------CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp CCCTT-------CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCCC-------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 01111 1245678999999999999999999999999998654
No 139
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.7e-39 Score=366.73 Aligned_cols=249 Identities=22% Similarity=0.294 Sum_probs=190.4
Q ss_pred cCCCcc-ceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhc-CCCCccceeEEEEe----eCceE
Q 002121 627 NNFSES-NEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRV-HHKNLVGLVGFCFE----QGEQM 699 (964)
Q Consensus 627 ~~~~~~-~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~----~~~~~ 699 (964)
++|... +.||+|+||+||+|... +|+.||||+++.. ..+.+|++++.++ +||||+++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456665 68999999999999964 6899999998632 3677899987554 89999999999876 56789
Q ss_pred EEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC---CCcEEEeecccce
Q 002121 700 LVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE---NLTAKVADFGLSK 776 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DFGla~ 776 (964)
+|||||++|+|.+++.......+++.++..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998765567999999999999999999999988 999999999999997 7899999999998
Q ss_pred eecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhH---HHHHHHhccCcccccc
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVV---REVRTAMNRDDEEHYG 853 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~ 853 (964)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ............
T Consensus 213 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~---- 285 (400)
T 1nxk_A 213 ETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE---- 285 (400)
T ss_dssp ECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC----
T ss_pred ccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc----
Confidence 764322 2345678999999999999999999999999999999999999996432110 001111111000
Q ss_pred cccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 854 LTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
.. .+.. ......+.+++.+||+.||++|||+.|+++.
T Consensus 286 ~~---~~~~----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 286 FP---NPEW----SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CC---TTTT----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CC---Cccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 0000 0112456789999999999999999999874
No 140
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.6e-39 Score=378.42 Aligned_cols=248 Identities=22% Similarity=0.275 Sum_probs=194.8
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCC---CcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQG---SMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|+..+.||+|+||.||+|.. .+|+.||||+++.. .......+.+|++++++++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46789999999999999999995 46899999998753 223334678899999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhh-cCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHE-LANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||+|+....
T Consensus 227 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999997543 68999999999999999999998 77 99999999999999999999999999985432
Q ss_pred CCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 781 SSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 781 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ............. ....++
T Consensus 302 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~~~~~----~p~~~~- 373 (446)
T 4ejn_A 302 DG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILMEEIR----FPRTLG- 373 (446)
T ss_dssp -------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCCC----CCTTSC-
T ss_pred CC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-HHHHHHHHhCCCC----CCccCC-
Confidence 21 223456799999999999999999999999999999999999999965432 2222222221111 111111
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRP-----TMSEVVK 896 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 896 (964)
..+.+++.+||+.||++|| +++|+++
T Consensus 374 ----------~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 374 ----------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ----------HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----------HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 3466899999999999999 9999875
No 141
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=366.24 Aligned_cols=263 Identities=18% Similarity=0.230 Sum_probs=197.9
Q ss_pred hcCCCccceeecCCcEEEEEEEec----CCcEEEEEEecCCCcc-----------hhHHHHHHHHHHHhcCCCCccceeE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS----DGQVVAIKRAQQGSMQ-----------GGLEFKTEIELLSRVHHKNLVGLVG 690 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l~~ 690 (964)
.++|...+.||+|+||+||+|... ++..||||+....... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357888999999999999999975 5789999998765322 1123667889999999999999999
Q ss_pred EEEe----eCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC-
Q 002121 691 FCFE----QGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL- 765 (964)
Q Consensus 691 ~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~- 765 (964)
++.+ ....++||||+ +++|.+++.... .+++.+++.++.||+.||+|||+.+ |+||||||+|||++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSST
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCC
Confidence 9988 67889999999 999999998654 7999999999999999999999988 99999999999998887
Q ss_pred -cEEEeecccceeecCCCCC-----ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHH
Q 002121 766 -TAKVADFGLSKLVSDSSKG-----HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVRE 839 (964)
Q Consensus 766 -~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~ 839 (964)
.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 9999999999876432211 1113457999999999999999999999999999999999999999532111111
Q ss_pred HHHHhccCcccccccccccCccchhhh--HHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 002121 840 VRTAMNRDDEEHYGLTEMMDPTIRNTV--LLGFRRYLELALQCVEESATDRPTMSEVVKAIETL 901 (964)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~d~~l~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 901 (964)
....... ....+...+.... ......+.+++.+||+.||++||++.+|++.|+..
T Consensus 270 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 270 VQTAKTN-------LLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHH-------HHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHHHh-------hcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 1111000 0000111111000 01224677999999999999999999999988753
No 142
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-39 Score=365.87 Aligned_cols=259 Identities=30% Similarity=0.467 Sum_probs=194.9
Q ss_pred CCCccceeecCCcEEEEEEEec--CC--cEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEe-eCceEEE
Q 002121 628 NFSESNEIGSGGYGKVYRGMLS--DG--QVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFE-QGEQMLV 701 (964)
Q Consensus 628 ~~~~~~~lG~G~fg~Vy~~~~~--~g--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lV 701 (964)
.|...+.||+|+||+||+|... ++ ..||||.++.... ...+++.+|+.++++++||||+++++++.+ ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4566789999999999999863 22 4689999875433 345679999999999999999999999765 4578999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++|+|.+++.... ..+++.+++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999997643 46899999999999999999999988 999999999999999999999999999866433
Q ss_pred CCC--ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCccccccccccc
Q 002121 782 SKG--HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 782 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
... .......+|+.|+|||++.+..++.++|||||||++|||+| |.+||...... +.......... ..
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-~~~~~~~~~~~--------~~ 316 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRR--------LL 316 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-CHHHHHHTTCC--------CC
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-HHHHHHHcCCC--------CC
Confidence 211 12234567889999999999999999999999999999999 66676532211 11111111111 00
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
.+. .....+.+++.+||+.||++||++.|+++.|+.+....
T Consensus 317 ~p~------~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 317 QPE------YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp CCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred CCC------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 010 11145678999999999999999999999999998654
No 143
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.7e-39 Score=372.94 Aligned_cols=247 Identities=23% Similarity=0.394 Sum_probs=204.7
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc---chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM---QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|...+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357888999999999999999965 799999999865321 2235788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++|+|.+++...+ .+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 95 ~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 99999999999997643 6899999999999999999999988 999999999999999999999999999876543
Q ss_pred CCCceeecccccCcccCccccccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
. ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... .............. ....++
T Consensus 170 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-~~~~~~~i~~~~~~----~p~~~s- 240 (476)
T 2y94_A 170 E---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-VPTLFKKICDGIFY----TPQYLN- 240 (476)
T ss_dssp C---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS-SHHHHHHHHTTCCC----CCTTCC-
T ss_pred c---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC-HHHHHHHHhcCCcC----CCccCC-
Confidence 2 2234579999999999988765 689999999999999999999997433 22233332222110 111111
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..+.+++.+||+.||++|||+.|+++
T Consensus 241 ----------~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 241 ----------PSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ----------HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----------HHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 34568999999999999999999986
No 144
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=8.3e-39 Score=351.06 Aligned_cols=263 Identities=21% Similarity=0.294 Sum_probs=205.0
Q ss_pred hhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEE-eeCceEEEE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCF-EQGEQMLVY 702 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~-~~~~~~lV~ 702 (964)
..++|...+.||+|+||+||+|+. .+|+.||||++...... .++.+|++++++++|++++..++++. +.+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999995 57899999987654322 36889999999999988887777764 556779999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE---CCCCcEEEeecccceeec
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL---DENLTAKVADFGLSKLVS 779 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DFGla~~~~ 779 (964)
||+ +|+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 999999997433 35999999999999999999999988 9999999999999 789999999999998775
Q ss_pred CCCCC-----ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCch-----hHHHHHHHhccCcc
Q 002121 780 DSSKG-----HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKY-----VVREVRTAMNRDDE 849 (964)
Q Consensus 780 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~-----~~~~~~~~~~~~~~ 849 (964)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+........
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~- 238 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP- 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch-
Confidence 44321 122345799999999999999999999999999999999999999964211 1111111000000
Q ss_pred cccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCCC
Q 002121 850 EHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDGM 907 (964)
Q Consensus 850 ~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 907 (964)
...........+.+++.+||+.||++||++.|+++.|+.+.++.+.
T Consensus 239 ------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 239 ------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp ------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred ------------hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 0000001124577999999999999999999999999999987653
No 145
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.4e-38 Score=347.16 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=204.1
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
.++|+..+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 568999999999999999999964 689999999875432 23456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc---EEEeecccceeec
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT---AKVADFGLSKLVS 779 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~DFGla~~~~ 779 (964)
||+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++....
T Consensus 85 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999999887543 5899999999999999999999988 999999999999986655 9999999998765
Q ss_pred CCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccC
Q 002121 780 DSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 780 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ............ .. .
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~----~~---~ 228 (284)
T 3kk8_A 160 DSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIKAGAYD----YP---S 228 (284)
T ss_dssp SSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC----CC---T
T ss_pred cCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-HHHHHHHhcccc----CC---c
Confidence 432 223456999999999999999999999999999999999999999654322 222222111110 00 0
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
+.. ......+.+++.+||+.||++|||+.|+++.
T Consensus 229 ~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 229 PEW----DTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TTT----TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhh----cccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000 0111446689999999999999999999873
No 146
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=355.61 Aligned_cols=260 Identities=28% Similarity=0.488 Sum_probs=202.3
Q ss_pred cCCCccceeecCCcEEEEEEEecC-----CcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLSD-----GQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~~-----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
.+|...+.||+|+||+||+|.... +..||||+++.... .....+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 466778999999999999998642 24699999976433 334578999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
||||+++|+|.+++.... ..+++.+++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 124 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999999997543 46899999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCC-ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCccccccccccc
Q 002121 781 SSKG-HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 781 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
.... .......+|+.|+|||++....++.++|||||||++|||++ |+.||..... .+.... +..... .. .
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-~~~~~~-~~~~~~----~~--~ 271 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HEVMKA-INDGFR----LP--T 271 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHH-HHTTCC----CC--C
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-HHHHHH-HHCCCc----CC--C
Confidence 3221 12223446889999999998999999999999999999999 9999964332 122222 111110 00 0
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
... ....+.+++.+||+.||++||++.|+++.|+++++..
T Consensus 272 ~~~-------~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 272 PMD-------CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp CTT-------CBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred ccc-------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 011 1245678999999999999999999999999988644
No 147
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.2e-38 Score=347.76 Aligned_cols=262 Identities=21% Similarity=0.296 Sum_probs=208.5
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEE-eeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCF-EQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~-~~~~~~lV~E 703 (964)
.++|...+.||+|+||.||+|+. .+|+.||||++...... .++.+|++++++++|++++..+.++. +.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 56899999999999999999996 57999999998754432 46899999999999998887777664 4566799999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE---CCCCcEEEeecccceeecC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL---DENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DFGla~~~~~ 780 (964)
|+ +|+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 899999997433 36999999999999999999999988 9999999999999 4889999999999987654
Q ss_pred CCCCc-----eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCch-----hHHHHHHHhccCccc
Q 002121 781 SSKGH-----VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKY-----VVREVRTAMNRDDEE 850 (964)
Q Consensus 781 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~ 850 (964)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+........
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 238 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-- 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc--
Confidence 43211 12345799999999999999999999999999999999999999964211 1111111000000
Q ss_pred ccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCCC
Q 002121 851 HYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDGM 907 (964)
Q Consensus 851 ~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 907 (964)
...........+.+++.+||+.||++||++.|+++.|+.+.+..+.
T Consensus 239 -----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 239 -----------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp -----------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred -----------hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 0000011124577999999999999999999999999999987754
No 148
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=4.9e-39 Score=379.46 Aligned_cols=251 Identities=25% Similarity=0.364 Sum_probs=206.4
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+++|++++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467889999999999999999964 79999999986532 22345688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++|+|.+++.......+++.++..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999998765556999999999999999999999988 999999999999999999999999999876543
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCch--hHHHHHHHhccCcccccccccccC
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKY--VVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+...+...... ....+
T Consensus 340 ~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~---~p~~~- 412 (576)
T 2acx_A 340 Q---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE---YSERF- 412 (576)
T ss_dssp C---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCC---CCTTS-
T ss_pred c---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccccc---CCccC-
Confidence 2 23445799999999999998999999999999999999999999975321 122222222111100 11111
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCC-----CHHHHHH
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRP-----TMSEVVK 896 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 896 (964)
...+.+++.+||+.||++|| +++|+++
T Consensus 413 ----------s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 413 ----------SPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ----------CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ----------CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 14466899999999999999 7788864
No 149
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=367.83 Aligned_cols=273 Identities=22% Similarity=0.273 Sum_probs=213.4
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeC--ceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQG--EQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lV~ 702 (964)
++|...+.||+|+||+||+|+.. +|+.||||+++.... .....+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 57888999999999999999975 589999999975432 33456889999999999999999999998765 679999
Q ss_pred EeccCCChhhhhcCCC-CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE----CCCCcEEEeeccccee
Q 002121 703 EFMANGTLRESLSGRS-GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL----DENLTAKVADFGLSKL 777 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl----~~~~~~kl~DFGla~~ 777 (964)
||+++|+|.+++.... ...+++.+++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997653 234899999999999999999999988 9999999999999 7888899999999987
Q ss_pred ecCCCCCceeecccccCcccCcccccc--------CCCCCchhHHHHHHHHHHHHhCCCCCCCC---chhHHHHHHHhcc
Q 002121 778 VSDSSKGHVSTQVKGTMGYLDPEYYMT--------QQLTEKSDVYSFGVVMLELITAKQPIEKG---KYVVREVRTAMNR 846 (964)
Q Consensus 778 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDv~S~Gvvl~elltg~~p~~~~---~~~~~~~~~~~~~ 846 (964)
..... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||... ....+.+......
T Consensus 166 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 166 LEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp CCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred ccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 65432 2234569999999999864 56788999999999999999999999621 2223333333333
Q ss_pred Cccccc-ccccccCc------cc---hhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 847 DDEEHY-GLTEMMDP------TI---RNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 847 ~~~~~~-~~~~~~d~------~l---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
.+.... ........ .+ ..........+.+++.+||+.||++||++.|+++.++.++...
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 221110 00000000 00 0112334466789999999999999999999999999988653
No 150
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=9.4e-39 Score=361.11 Aligned_cols=250 Identities=22% Similarity=0.333 Sum_probs=194.0
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEe
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
.++|...+.||+|+||+||+|+.. +|+.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 457889999999999999999965 789999999975433 235788999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc--EEEeecccceeecCCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT--AKVADFGLSKLVSDSS 782 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~--~kl~DFGla~~~~~~~ 782 (964)
+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 98 ~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~- 171 (361)
T 3uc3_A 98 ASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH- 171 (361)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcccccccc-
Confidence 99999999987543 5899999999999999999999988 999999999999987765 999999999754322
Q ss_pred CCceeecccccCcccCccccccCCCCCc-hhHHHHHHHHHHHHhCCCCCCCCc---hhHHHHHHHhccCccccccccccc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEK-SDVYSFGVVMLELITAKQPIEKGK---YVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDv~S~Gvvl~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
.......||+.|+|||++.+..++.+ +|||||||++|||++|+.||.... .....+......... ...
T Consensus 172 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~----~~~-- 243 (361)
T 3uc3_A 172 --SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS----IPD-- 243 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCC----CCT--
T ss_pred --CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCC----CCC--
Confidence 12234569999999999988877655 899999999999999999997432 222222222221110 110
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
+..+ ...+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~-------s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 DIRI-------SPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TSCC-------CHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cCCC-------CHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0011 1456689999999999999999999864
No 151
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.8e-39 Score=372.94 Aligned_cols=259 Identities=24% Similarity=0.318 Sum_probs=195.6
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCC--cchhHHHHHHHHHHHhcCCCCccceeEEEEee------C
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGS--MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ------G 696 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~ 696 (964)
.++|+..+.||+|+||+||+|.. .+|+.||||++.... .....++.+|+.++++++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 56899999999999999999985 468999999997542 23345788999999999999999999999754 3
Q ss_pred ceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 697 EQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 697 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
..++|||||++ +|.+.+.. .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+|+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 56999999986 57666643 3899999999999999999999988 9999999999999999999999999998
Q ss_pred eecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhc---cCccc---
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMN---RDDEE--- 850 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~--- 850 (964)
..... ...+...||+.|+|||++.+..++.++||||+||++|||++|+.||....... .+..++. ....+
T Consensus 213 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 213 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp ----C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHT
T ss_pred ecCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 76432 22345679999999999999999999999999999999999999997544322 2222211 10000
Q ss_pred -----------------ccccccccCccc----hhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 851 -----------------HYGLTEMMDPTI----RNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 851 -----------------~~~~~~~~d~~l----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.......+...+ ..........+.+++.+||+.||++|||++|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000111000 0001112456789999999999999999999975
No 152
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=384.20 Aligned_cols=259 Identities=25% Similarity=0.397 Sum_probs=203.1
Q ss_pred CCCccc-eeecCCcEEEEEEEec---CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 628 NFSESN-EIGSGGYGKVYRGMLS---DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 628 ~~~~~~-~lG~G~fg~Vy~~~~~---~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
++...+ .||+|+||.||+|.+. ++..||||+++.... ...+++.+|+++|++++|||||+++++|.+ +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 333344 7999999999999864 466899999986533 345689999999999999999999999976 6799999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
|||++|+|.+++.... ..+++.++..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 415 E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~ 490 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490 (613)
T ss_dssp ECCTTCBHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred EeCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence 9999999999997643 46999999999999999999999988 9999999999999999999999999998764332
Q ss_pred CC-ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 783 KG-HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 783 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
.. .......+|+.|+|||++..+.++.++|||||||++|||+| |+.||..... .+.... +..... . ...+
T Consensus 491 ~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-~~~~~~-i~~~~~----~--~~p~ 562 (613)
T 2ozo_A 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-PEVMAF-IEQGKR----M--ECPP 562 (613)
T ss_dssp -----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-HHHHHH-HHTTCC----C--CCCT
T ss_pred ceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-HHHHHH-HHcCCC----C--CCCC
Confidence 21 11223346789999999999999999999999999999998 9999964332 122221 211110 0 0011
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCC
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDG 906 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 906 (964)
. ....+.+++.+||+.||++||++.+|++.|+.+.....
T Consensus 563 ~-------~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 563 E-------CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp T-------CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred c-------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 1 12456789999999999999999999999999887654
No 153
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=9.2e-39 Score=354.51 Aligned_cols=255 Identities=20% Similarity=0.265 Sum_probs=195.8
Q ss_pred cCCCcc-ceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEEEEE
Q 002121 627 NNFSES-NEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 627 ~~~~~~-~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
+.|.+. +.||+|+||+||+|.. .+|+.||||++..........+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 467664 7899999999999995 47899999999876655567899999999995 79999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc---EEEeecccceeecC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT---AKVADFGLSKLVSD 780 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~DFGla~~~~~ 780 (964)
|+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++....
T Consensus 92 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred cCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 999999999997643 5899999999999999999999988 999999999999998776 99999999976542
Q ss_pred CCC-----CceeecccccCcccCcccccc-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCchh-------------H
Q 002121 781 SSK-----GHVSTQVKGTMGYLDPEYYMT-----QQLTEKSDVYSFGVVMLELITAKQPIEKGKYV-------------V 837 (964)
Q Consensus 781 ~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~-------------~ 837 (964)
... ........||+.|+|||++.. ..++.++|||||||++|||++|+.||...... .
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 211 111223469999999999875 56889999999999999999999999643210 0
Q ss_pred HHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 838 REVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..+...+..... .. .... .......+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~i~~~~~---~~----~~~~---~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 247 NMLFESIQEGKY---EF----PDKD---WAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHCCC---CC----CHHH---HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhccCc---cc----Cchh---cccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 111111111100 00 0000 0011245679999999999999999999976
No 154
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.8e-39 Score=361.46 Aligned_cols=246 Identities=28% Similarity=0.433 Sum_probs=199.8
Q ss_pred cCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcc---hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQ---GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
+.|...+.||+|+||+||+|+. .+|+.||||++...... ...++.+|++++++++||||+++++++.+++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999995 57899999998754332 2346889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||++ |+|.+++.... ..+++.++..++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred ecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 9997 68888875432 46899999999999999999999988 999999999999999999999999999865432
Q ss_pred CCceeecccccCcccCccccc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccC
Q 002121 783 KGHVSTQVKGTMGYLDPEYYM---TQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
....||+.|+|||++. .+.++.++|||||||++|||++|+.||...... ..+........ .....
T Consensus 208 -----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~------~~~~~ 275 (348)
T 1u5q_A 208 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNES------PALQS 275 (348)
T ss_dssp -----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCC------CCCCC
T ss_pred -----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcCC------CCCCC
Confidence 2356999999999984 567899999999999999999999999754432 22222222111 00011
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
... ...+.+++.+||+.||++|||+.|+++.
T Consensus 276 ~~~-------~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 276 GHW-------SEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp TTS-------CHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCC-------CHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111 1346689999999999999999999864
No 155
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-40 Score=366.58 Aligned_cols=262 Identities=27% Similarity=0.424 Sum_probs=189.9
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHh--cCCCCccceeEEEEeeC----ceE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSR--VHHKNLVGLVGFCFEQG----EQM 699 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~ 699 (964)
.++|...+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++.. ++||||+++++++.+.+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 357899999999999999999874 899999998643 33467788888888 78999999999998877 789
Q ss_pred EEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHh--------hcCCCCeeccCCCCCcEEECCCCcEEEee
Q 002121 700 LVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLH--------ELANPPIIHRDVKSTNILLDENLTAKVAD 771 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 771 (964)
+||||+++|+|.+++... .+++.+++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|
T Consensus 78 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred EEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEee
Confidence 999999999999999754 5889999999999999999999 666 99999999999999999999999
Q ss_pred cccceeecCCCCCc--eeecccccCcccCccccccC------CCCCchhHHHHHHHHHHHHhC----------CCCCCCC
Q 002121 772 FGLSKLVSDSSKGH--VSTQVKGTMGYLDPEYYMTQ------QLTEKSDVYSFGVVMLELITA----------KQPIEKG 833 (964)
Q Consensus 772 FGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~S~Gvvl~elltg----------~~p~~~~ 833 (964)
||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| ..||...
T Consensus 152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 99998765433211 12334699999999998765 444689999999999999999 5565421
Q ss_pred ch---hHHHHHHHhccCcccccccccccCccchhh--hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCC
Q 002121 834 KY---VVREVRTAMNRDDEEHYGLTEMMDPTIRNT--VLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDG 906 (964)
Q Consensus 834 ~~---~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 906 (964)
.. ....+.... ......+..... .......+.+++.+||+.||++|||+.|+++.|+.+.++.+
T Consensus 232 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 232 VPSDPSVEEMRKVV---------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp CC-CCCCC-CHHHH---------TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred CCCCccHHHHHHHH---------HHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 10 000011111 011112222211 22445678899999999999999999999999998765543
No 156
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.1e-39 Score=370.07 Aligned_cols=253 Identities=24% Similarity=0.368 Sum_probs=191.6
Q ss_pred HhhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc--------chhHHHHHHHHHHHhcCCCCccceeEEEEe
Q 002121 624 KCSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM--------QGGLEFKTEIELLSRVHHKNLVGLVGFCFE 694 (964)
Q Consensus 624 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 694 (964)
...++|...+.||+|+||+||+|... +++.||||++..... .....+.+|+++|++++|||||++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 34678999999999999999999964 689999999864321 12235889999999999999999999975
Q ss_pred eCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCC---CcEEEee
Q 002121 695 QGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDEN---LTAKVAD 771 (964)
Q Consensus 695 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~---~~~kl~D 771 (964)
.+..++||||+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.+ +.+||+|
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred cCceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEee
Confidence 456899999999999999987653 6899999999999999999999988 9999999999999654 4599999
Q ss_pred cccceeecCCCCCceeecccccCcccCcccccc---CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCc
Q 002121 772 FGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMT---QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDD 848 (964)
Q Consensus 772 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 848 (964)
||+++..... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||..................
T Consensus 286 FG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~ 362 (419)
T 3i6u_A 286 FGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 362 (419)
T ss_dssp SSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC
T ss_pred cccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC
Confidence 9999876432 22345679999999999853 67788999999999999999999999643221111111111110
Q ss_pred ccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 849 EEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 849 ~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
. ..+... ......+.+++.+||+.||++||+++|+++
T Consensus 363 ~--------~~~~~~---~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 363 N--------FIPEVW---AEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp C--------CCHHHH---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred C--------CCchhh---cccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0 011111 112245678999999999999999999875
No 157
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=351.14 Aligned_cols=263 Identities=24% Similarity=0.324 Sum_probs=198.7
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
++|...+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57889999999999999999975 5899999998654433 24568899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 783 (964)
|+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS- 156 (311)
T ss_dssp CCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-
Confidence 999999999887543 5899999999999999999999988 9999999999999999999999999998765332
Q ss_pred CceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHH--HHHHHhccCccc---------c
Q 002121 784 GHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVR--EVRTAMNRDDEE---------H 851 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~--~~~~~~~~~~~~---------~ 851 (964)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ .+.......... .
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 157 -DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred -cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 22334568999999999875 6789999999999999999999999975433221 111111110000 0
Q ss_pred cccccccCcc----chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 852 YGLTEMMDPT----IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 852 ~~~~~~~d~~----l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.......++. +..........+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000000 00001122345779999999999999999999985
No 158
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5.4e-39 Score=349.72 Aligned_cols=253 Identities=26% Similarity=0.433 Sum_probs=202.6
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc---chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM---QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|...+.||+|+||+||+|... +++.||||++..... .....+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467889999999999999999864 578999999864321 2235688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999999987543 5899999999999999999999988 999999999999999999999999998654332
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...... +........... ..+.+
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~----~~~~~--- 230 (279)
T 3fdn_A 163 ----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFT----FPDFV--- 230 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCC----CCTTS---
T ss_pred ----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH-HHHHHHHhCCCC----CCCcC---
Confidence 223457999999999999999999999999999999999999999754322 222211111110 11111
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
...+.+++.+||+.||++||++.|+++. .+++..
T Consensus 231 --------~~~~~~li~~~l~~~p~~Rps~~e~l~h--~~~~~~ 264 (279)
T 3fdn_A 231 --------TEGARDLISRLLKHNPSQRPMLREVLEH--PWITAN 264 (279)
T ss_dssp --------CHHHHHHHHHHCCSSGGGSCCHHHHHHC--HHHHHH
T ss_pred --------CHHHHHHHHHHhccChhhCCCHHHHhhC--ccccCC
Confidence 1345689999999999999999999974 444433
No 159
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=362.34 Aligned_cols=262 Identities=24% Similarity=0.419 Sum_probs=209.1
Q ss_pred hcCCCccceeecCCcEEEEEEEe-----cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeC--ce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-----SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQG--EQ 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~ 698 (964)
.++|...+.||+|+||.||+|++ .+|+.||||++..........+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35678889999999999999984 368899999998766666678999999999999999999999987644 78
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
++||||+++|+|.+++.... ..+++.+++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 99999999999999997653 35899999999999999999999988 999999999999999999999999999877
Q ss_pred cCCCCCc-eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhH--------------HHHHHH
Q 002121 779 SDSSKGH-VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVV--------------REVRTA 843 (964)
Q Consensus 779 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~--------------~~~~~~ 843 (964)
....... ......++..|+|||++.+..++.++||||||+++|||+||..|+....... ..+...
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence 5433211 1223457788999999998889999999999999999999999985321110 011111
Q ss_pred hccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 844 MNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 844 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
+.... ..... ......+.+++.+||+.||++||++.|+++.|+++.++
T Consensus 276 ~~~~~----------~~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 276 LKNNG----------RLPRP---DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHTTC----------CCCCC---TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhcCC----------CCCCC---CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11100 00000 11124577899999999999999999999999988754
No 160
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=6.2e-39 Score=357.84 Aligned_cols=262 Identities=25% Similarity=0.387 Sum_probs=206.0
Q ss_pred hcCCCccceeecCCcEEEEEEEe------cCCcEEEEEEecCCC-cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML------SDGQVVAIKRAQQGS-MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQ 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 698 (964)
.++|...+.||+|+||.||+|+. .+++.||||++.... .....++.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46889999999999999999984 257799999997543 23445789999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCCC-----CccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC---CCcEEEe
Q 002121 699 MLVYEFMANGTLRESLSGRSG-----IHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE---NLTAKVA 770 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~ 770 (964)
++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||+.+ |+||||||+|||++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999976431 35899999999999999999999988 999999999999984 4569999
Q ss_pred ecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcc
Q 002121 771 DFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDE 849 (964)
Q Consensus 771 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 849 (964)
|||+++...............||+.|+|||++.+..++.++||||||+++|||+| |+.||..... .+...........
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~ 264 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRM 264 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCCC
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-HHHHHHHhcCCCC
Confidence 9999986544333233344568999999999998999999999999999999998 8999864332 1222221111110
Q ss_pred cccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 850 EHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 850 ~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
.. ... ....+.+++.+||+.||++||++.|+++.|+.+....
T Consensus 265 ---~~----~~~-------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 265 ---DP----PKN-------CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp ---CC----CTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred ---CC----CCC-------CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 00 111 1145678999999999999999999999999887644
No 161
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=349.87 Aligned_cols=249 Identities=24% Similarity=0.378 Sum_probs=182.1
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCc---chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSM---QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|...+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35788899999999999999996 5789999999864321 2235789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++++|.+++.... ..+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999998653 46899999999999999999999988 999999999999999999999999999876432
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ........ . +..
T Consensus 166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~---------~---~~~ 230 (278)
T 3cok_A 166 HE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK-NTLNKVVL---------A---DYE 230 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------CCS---------S---CCC
T ss_pred CC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH-HHHHHHhh---------c---ccC
Confidence 21 123356899999999999888999999999999999999999999643211 11111000 0 001
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.... ....+.+++.+||+.||++||++.|+++
T Consensus 231 ~~~~---~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 231 MPSF---LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CCTT---SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred Cccc---cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1111 1145668999999999999999999875
No 162
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.5e-38 Score=345.10 Aligned_cols=256 Identities=20% Similarity=0.297 Sum_probs=204.3
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc------hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ------GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQM 699 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 699 (964)
++|...+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56888999999999999999975 6899999998754321 3467999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC----cEEEeecccc
Q 002121 700 LVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL----TAKVADFGLS 775 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~DFGla 775 (964)
+||||+++++|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++
T Consensus 85 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 999999999999999753 36899999999999999999999988 99999999999998877 8999999999
Q ss_pred eeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccc
Q 002121 776 KLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLT 855 (964)
Q Consensus 776 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (964)
+...... ......||+.|+|||++....++.++||||||+++|||++|+.||..... .+..........
T Consensus 160 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~------- 228 (283)
T 3bhy_A 160 HKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-QETLTNISAVNY------- 228 (283)
T ss_dssp EECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTTCC-------
T ss_pred eeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-HHHHHHhHhccc-------
Confidence 8764432 22345699999999999989999999999999999999999999975432 222222111111
Q ss_pred cccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH--HHHHHH
Q 002121 856 EMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK--AIETLL 902 (964)
Q Consensus 856 ~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~ 902 (964)
..+.... ......+.+++.+||+.||++||++.|+++ .++.+.
T Consensus 229 -~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 229 -DFDEEYF---SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp -CCCHHHH---TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred -CCcchhc---ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 0111111 111245678999999999999999999987 455544
No 163
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.5e-39 Score=367.15 Aligned_cols=263 Identities=22% Similarity=0.365 Sum_probs=192.1
Q ss_pred HhhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCC--cchhHHHHHHHHHHHhcC-CCCccceeEEEEeeC--c
Q 002121 624 KCSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGS--MQGGLEFKTEIELLSRVH-HKNLVGLVGFCFEQG--E 697 (964)
Q Consensus 624 ~~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~--~ 697 (964)
...++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3457899999999999999999995 478999999986542 233456789999999997 999999999997644 6
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
.++|||||+ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+|+.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 899999998 5999998753 5899999999999999999999988 99999999999999999999999999987
Q ss_pred ecCCC-------------------CCceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhH
Q 002121 778 VSDSS-------------------KGHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVV 837 (964)
Q Consensus 778 ~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~ 837 (964)
..... .....+...||+.|+|||++.+ ..++.++||||+||++|||++|++||..... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~ 237 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST-M 237 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-H
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH-H
Confidence 54311 1122344679999999999876 6789999999999999999999999965433 2
Q ss_pred HHHHHHh---ccCcccccccccccCc----------------------cchhh---------hHHHHHHHHHHHHHhhhc
Q 002121 838 REVRTAM---NRDDEEHYGLTEMMDP----------------------TIRNT---------VLLGFRRYLELALQCVEE 883 (964)
Q Consensus 838 ~~~~~~~---~~~~~~~~~~~~~~d~----------------------~l~~~---------~~~~~~~l~~li~~cl~~ 883 (964)
+.+...+ ....... +.....+ ..... .......+.+++.+||+.
T Consensus 238 ~~~~~i~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~ 315 (388)
T 3oz6_A 238 NQLERIIGVIDFPSNED--VESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315 (388)
T ss_dssp HHHHHHHHHHCCCCHHH--HHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHhcCCCCHHH--HHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence 2222221 1111000 0000000 00000 001124577999999999
Q ss_pred CCCCCCCHHHHHH
Q 002121 884 SATDRPTMSEVVK 896 (964)
Q Consensus 884 dP~~RPs~~evl~ 896 (964)
||++|||++|+++
T Consensus 316 dP~~R~t~~e~l~ 328 (388)
T 3oz6_A 316 NPNKRISANDALK 328 (388)
T ss_dssp SGGGSCCHHHHTT
T ss_pred CcccCCCHHHHhC
Confidence 9999999999875
No 164
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=359.46 Aligned_cols=243 Identities=24% Similarity=0.346 Sum_probs=201.8
Q ss_pred hhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcc--------hhHHHHHHHHHHHhcCCCCccceeEEEEee
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQ--------GGLEFKTEIELLSRVHHKNLVGLVGFCFEQ 695 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 695 (964)
..++|...+.||+|+||+||+|+. .+|+.||||+++..... ....+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356899999999999999999995 57899999998765321 223578899999999999999999999999
Q ss_pred CceEEEEEeccCC-ChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccc
Q 002121 696 GEQMLVYEFMANG-TLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGL 774 (964)
Q Consensus 696 ~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGl 774 (964)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeeccc
Confidence 9999999999777 9999998654 5999999999999999999999988 99999999999999999999999999
Q ss_pred ceeecCCCCCceeecccccCcccCccccccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccc
Q 002121 775 SKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYG 853 (964)
Q Consensus 775 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 853 (964)
++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .....
T Consensus 177 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~----- 241 (335)
T 3dls_A 177 AAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------VEAAI----- 241 (335)
T ss_dssp CEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------TTTCC-----
T ss_pred ceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------Hhhcc-----
Confidence 987654322 234569999999999988776 78999999999999999999999642110 00000
Q ss_pred cccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 854 LTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
..+.. ....+.+++.+||+.||++|||+.|+++.
T Consensus 242 ----~~~~~------~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 242 ----HPPYL------VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----CCSSC------CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----CCCcc------cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 11456789999999999999999999863
No 165
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.4e-39 Score=350.25 Aligned_cols=254 Identities=26% Similarity=0.427 Sum_probs=200.1
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEee-CceEEEEEe
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ-GEQMLVYEF 704 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lV~E~ 704 (964)
.++|+..+.||+|+||+||+|... |+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 467888999999999999999884 8899999987543 345789999999999999999999997654 578999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKG 784 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 784 (964)
+++|+|.+++.......+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 99999999997654334889999999999999999999988 9999999999999999999999999998654321
Q ss_pred ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccCccch
Q 002121 785 HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIR 863 (964)
Q Consensus 785 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (964)
....+++.|+|||++.+..++.++||||||+++|||+| |+.||..... .+.... +.... .....
T Consensus 172 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-~~~~~~-~~~~~----------~~~~~ 236 (278)
T 1byg_A 172 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KDVVPR-VEKGY----------KMDAP 236 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-GGHHHH-HTTTC----------CCCCC
T ss_pred ---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHH-HhcCC----------CCCCc
Confidence 22357899999999998999999999999999999998 9999864321 111111 11111 00011
Q ss_pred hhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 864 NTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 864 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
. .....+.+++.+||+.||++||++.|+++.|+.+...+
T Consensus 237 ~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 237 D---GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred c---cCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 1 11245678999999999999999999999999987654
No 166
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.8e-39 Score=364.98 Aligned_cols=247 Identities=26% Similarity=0.332 Sum_probs=193.8
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc---chhHHHHHHHHH-HHhcCCCCccceeEEEEeeCceEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM---QGGLEFKTEIEL-LSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
.++|...+.||+|+||+||+|+.. +++.||||+++.... .....+.+|..+ ++.++|||||++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357889999999999999999965 588999999875432 223356677776 577899999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecC
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~ 780 (964)
||||+++|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999997643 5889999999999999999999988 99999999999999999999999999986432
Q ss_pred CCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 781 SSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 781 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+........... . .+
T Consensus 192 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-~~~~~~~i~~~~~~----~----~~ 260 (373)
T 2r5t_A 192 HN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-TAEMYDNILNKPLQ----L----KP 260 (373)
T ss_dssp CC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB-HHHHHHHHHHSCCC----C----CS
T ss_pred CC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHhcccC----C----CC
Confidence 22 22345679999999999999999999999999999999999999996533 23333333322111 1 11
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVV 895 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 895 (964)
.+. ..+.+++.+||+.||++||++.+.+
T Consensus 261 ~~~-------~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 261 NIT-------NSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp SSC-------HHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred CCC-------HHHHHHHHHHcccCHHhCCCCCCCH
Confidence 111 3456899999999999999986433
No 167
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.2e-38 Score=355.49 Aligned_cols=257 Identities=20% Similarity=0.277 Sum_probs=203.2
Q ss_pred HHHhhcCCCcc-ceeecCCcEEEEEEEec-CCcEEEEEEecCCCc--chhHHHHHHHHHHHhcC-CCCccceeEEEEeeC
Q 002121 622 LKKCSNNFSES-NEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVH-HKNLVGLVGFCFEQG 696 (964)
Q Consensus 622 l~~~~~~~~~~-~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~ 696 (964)
.+...+.|.+. +.||+|+||+||+|+.. +|+.||||+++.... ....++.+|+.++.+++ ||||+++++++.+.+
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~ 102 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS 102 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence 34445667776 88999999999999965 689999999875332 33567899999999995 699999999999999
Q ss_pred ceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC---CCcEEEeecc
Q 002121 697 EQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE---NLTAKVADFG 773 (964)
Q Consensus 697 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DFG 773 (964)
..++||||+++|+|.+++.......+++.+++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 103 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 9999999999999999997665567999999999999999999999988 999999999999998 7899999999
Q ss_pred cceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccc
Q 002121 774 LSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYG 853 (964)
Q Consensus 774 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 853 (964)
+++...... ......||+.|+|||++....++.++|||||||++|||++|+.||........ ..........
T Consensus 180 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~---- 251 (327)
T 3lm5_A 180 MSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-YLNISQVNVD---- 251 (327)
T ss_dssp GCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCC----
T ss_pred cccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-HHHHHhcccc----
Confidence 998765332 22345799999999999999999999999999999999999999975433222 1111111110
Q ss_pred cccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 854 LTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.. .... ......+.+++.+||+.||++|||++|+++
T Consensus 252 ~~----~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 252 YS----EETF---SSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp CC----TTTT---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cC----chhh---cccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 00 0000 111244668999999999999999999975
No 168
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.8e-38 Score=354.10 Aligned_cols=259 Identities=28% Similarity=0.448 Sum_probs=205.9
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcE--EEEEEecCCC-cchhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQV--VAIKRAQQGS-MQGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 701 (964)
++|...+.||+|+||.||+|+.. +|.. ||+|+++... ......+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888999999999999999964 5664 4999887533 23445789999999999 899999999999999999999
Q ss_pred EEeccCCChhhhhcCCC--------------CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcE
Q 002121 702 YEFMANGTLRESLSGRS--------------GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTA 767 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~ 767 (964)
|||+++|+|.+++.... ...+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 99999999999997643 246899999999999999999999988 9999999999999999999
Q ss_pred EEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhcc
Q 002121 768 KVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNR 846 (964)
Q Consensus 768 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 846 (964)
||+|||+++...... ......+++.|+|||++....++.++|||||||++|||+| |+.||..... .+.... +..
T Consensus 182 kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-~~~~~~-~~~ 256 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEK-LPQ 256 (327)
T ss_dssp EECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHH-GGG
T ss_pred EEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-HHHHHH-hhc
Confidence 999999997432211 1223457889999999988889999999999999999998 9999965332 222222 211
Q ss_pred CcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCC
Q 002121 847 DDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDG 906 (964)
Q Consensus 847 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 906 (964)
... . ..... ....+.+++.+||+.||++||++.|+++.|+.++++..
T Consensus 257 ~~~----~--~~~~~-------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 257 GYR----L--EKPLN-------CDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp TCC----C--CCCTT-------BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCC----C--CCCCC-------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 110 0 00111 11456789999999999999999999999999987654
No 169
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8.6e-39 Score=356.18 Aligned_cols=244 Identities=20% Similarity=0.304 Sum_probs=179.1
Q ss_pred cceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcC-CCCccceeEEEEeeCceEEEEEeccCCC
Q 002121 632 SNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVH-HKNLVGLVGFCFEQGEQMLVYEFMANGT 709 (964)
Q Consensus 632 ~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~E~~~~gs 709 (964)
.+.||+|+||+||+|... +|+.||||++... ....+.+|+.+++++. ||||+++++++.+.+..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999974 6899999998643 3457889999999997 9999999999999999999999999999
Q ss_pred hhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC---cEEEeecccceeecCCCCCce
Q 002121 710 LRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL---TAKVADFGLSKLVSDSSKGHV 786 (964)
Q Consensus 710 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~DFGla~~~~~~~~~~~ 786 (964)
|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++...... ..
T Consensus 93 L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~ 165 (325)
T 3kn6_A 93 LFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QP 165 (325)
T ss_dssp HHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--Cc
Confidence 999998653 6999999999999999999999988 99999999999997765 89999999998764432 22
Q ss_pred eecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCch------hHHHHHHHhccCcccccccccccCc
Q 002121 787 STQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKY------VVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 787 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+........... ...
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~ 237 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS--------FEG 237 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC--------CCS
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC--------CCc
Confidence 3445689999999999999999999999999999999999999964321 11222222111110 010
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.. .......+.+++.+||+.||++|||++|+++
T Consensus 238 ~~---~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 238 EA---WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HH---HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cc---ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 11 1112245678999999999999999999874
No 170
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=9.1e-39 Score=358.17 Aligned_cols=251 Identities=20% Similarity=0.320 Sum_probs=200.4
Q ss_pred hhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEEEE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
..++|...+.||+|+||+||+|... +|+.||||+++.... ...+|++++.++ +||||+++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3567899999999999999999965 689999999976432 345788899888 7999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCC----CcEEEeecccceee
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDEN----LTAKVADFGLSKLV 778 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~----~~~kl~DFGla~~~ 778 (964)
||+++|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||+.++ +.+||+|||+++..
T Consensus 96 E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999997653 6899999999999999999999988 9999999999998443 35999999999876
Q ss_pred cCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCC--chhHHHHHHHhccCccccccccc
Q 002121 779 SDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKG--KYVVREVRTAMNRDDEEHYGLTE 856 (964)
Q Consensus 779 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 856 (964)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||... ....+........... ..
T Consensus 171 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~----~~- 243 (342)
T 2qr7_A 171 RAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFS----LS- 243 (342)
T ss_dssp BCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCC----CC-
T ss_pred cCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcc----cC-
Confidence 54322 233457899999999998888999999999999999999999999743 2222222222211110 10
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 857 MMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 857 ~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
...... ....+.+++.+||+.||++||++.|+++.
T Consensus 244 ---~~~~~~---~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 244 ---GGYWNS---VSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ---STTTTT---SCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---cccccc---CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001111 11446689999999999999999999863
No 171
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=363.23 Aligned_cols=266 Identities=24% Similarity=0.337 Sum_probs=193.4
Q ss_pred HhhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcC-CCCccceeEEEEe-------
Q 002121 624 KCSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVH-HKNLVGLVGFCFE------- 694 (964)
Q Consensus 624 ~~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~------- 694 (964)
....+|...+.||+|+||.||+|+. .+|+.||||++..........+.+|+.++.++. ||||+++++++..
T Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 3345789999999999999999996 478999999987665555667899999999996 9999999999953
Q ss_pred -eCceEEEEEeccCCChhhhhcCC-CCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeec
Q 002121 695 -QGEQMLVYEFMANGTLRESLSGR-SGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADF 772 (964)
Q Consensus 695 -~~~~~lV~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DF 772 (964)
....++||||++ |+|.+++... ....+++.+++.++.|++.||+|||+.+ ++|+||||||+|||++.++.+||+||
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecC
Confidence 334799999996 7999988642 2346999999999999999999999865 46999999999999999999999999
Q ss_pred ccceeecCCCCCc----------eeecccccCcccCcccc---ccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHH
Q 002121 773 GLSKLVSDSSKGH----------VSTQVKGTMGYLDPEYY---MTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVRE 839 (964)
Q Consensus 773 Gla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~ 839 (964)
|+++......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||...... ..
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~ 261 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-RI 261 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-Hh
Confidence 9998765432211 11134589999999998 5667889999999999999999999999643221 11
Q ss_pred HHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCCCCC
Q 002121 840 VRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDGMNT 909 (964)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 909 (964)
........ ...... ..+.+++.+||+.||++||++.|+++.|+.+........
T Consensus 262 ~~~~~~~~------~~~~~~-----------~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~~ 314 (337)
T 3ll6_A 262 VNGKYSIP------PHDTQY-----------TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNP 314 (337)
T ss_dssp ----CCCC------TTCCSS-----------GGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCCT
T ss_pred hcCcccCC------cccccc-----------hHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCCC
Confidence 10000000 000011 225589999999999999999999999999987765443
No 172
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-38 Score=347.80 Aligned_cols=251 Identities=25% Similarity=0.347 Sum_probs=196.5
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
.++|...+.||+|+||+||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 357888999999999999999964 689999999875432 345678999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCC--CCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE---CCCCcEEEeecccceee
Q 002121 704 FMANGTLRESLSGR--SGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL---DENLTAKVADFGLSKLV 778 (964)
Q Consensus 704 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DFGla~~~ 778 (964)
|+++|+|.+++... .+..+++..+..++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988543 1346899999999999999999999988 9999999999999 55688999999999865
Q ss_pred cCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccccccc
Q 002121 779 SDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 779 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
.... ......||+.|+|||++. +.++.++||||||+++|||++|+.||...... +........... ....
T Consensus 178 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~~----~~~~- 247 (285)
T 3is5_A 178 KSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-EVQQKATYKEPN----YAVE- 247 (285)
T ss_dssp ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCC----CCC--
T ss_pred CCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-HHHhhhccCCcc----cccc-
Confidence 4332 234456999999999875 56899999999999999999999999753321 111111111110 0000
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
... ....+.+++.+||+.||++||++.|+++
T Consensus 248 ~~~-------~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 CRP-------LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp -CC-------CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCc-------CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 1145668999999999999999999975
No 173
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.2e-38 Score=396.06 Aligned_cols=350 Identities=27% Similarity=0.403 Sum_probs=254.7
Q ss_pred CCeeEEEcCCCCccccccCC-cCCCCcccEEecccCCCCCCCCCCCCCCcc-cchhhccccccccCcCCcccCC--CCCc
Q 002121 64 SRVTALGLSTMGLTGKLSGD-IGGLTELRSLDLSYNGGLTGSLSPRIGDLQ-KLNILILAGCGFTGNIPDEIGN--LAEL 139 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~-l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~--l~~L 139 (964)
.+++.|+|++|.++|.+|.. +..+++|++|+|++| .+.+.+|..+.++. +|++|+|++|.+++.+|..+.. +++|
T Consensus 318 ~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n-~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L 396 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN-EFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396 (768)
T ss_dssp TTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSS-EEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCC
T ss_pred CCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCC-ccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCc
Confidence 57888999999998888876 888999999999988 78888888888887 8888888888888777777766 7778
Q ss_pred cEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCccee
Q 002121 140 SFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLI 219 (964)
Q Consensus 140 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~ 219 (964)
++|+|++|.+++.+|..|.++++|++|+|++|+++|.+| ..+..+++|+.|++++|++++.+|.. |..+++|+
T Consensus 397 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p------~~l~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~ 469 (768)
T 3rgz_A 397 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP------SSLGSLSKLRDLKLWLNMLEGEIPQE-LMYVKTLE 469 (768)
T ss_dssp CEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCC------GGGGGCTTCCEEECCSSCCCSCCCGG-GGGCTTCC
T ss_pred cEEECCCCccccccCHHHhcCCCCCEEECcCCcccCccc------HHHhcCCCCCEEECCCCcccCcCCHH-HcCCCCce
Confidence 888888888887788888888888888888888877777 44667777777777777777666654 44566777
Q ss_pred EEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCC
Q 002121 220 HVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNS 298 (964)
Q Consensus 220 ~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~ 298 (964)
+|++++|++++.+|..+..+++|++|+|++|++++.+|.+|+++++|++|+|++|++++.+|. +..+++|++|+|++|+
T Consensus 470 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 549 (768)
T 3rgz_A 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNL 549 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSE
T ss_pred EEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCc
Confidence 777777777777777777777777777777777777777777777777777777777765553 7777777777777777
Q ss_pred CCCCCCC---------------------------------------------------------------------cccC
Q 002121 299 FDPTEAP---------------------------------------------------------------------LWFS 309 (964)
Q Consensus 299 l~~~~~~---------------------------------------------------------------------~~~~ 309 (964)
+++..+. ..+.
T Consensus 550 l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~ 629 (768)
T 3rgz_A 550 FNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 629 (768)
T ss_dssp EESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCS
T ss_pred cCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhh
Confidence 7532221 1233
Q ss_pred CCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccC---CCccccee
Q 002121 310 TLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLG---SGIKNYTL 386 (964)
Q Consensus 310 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~---~~~~l~~l 386 (964)
.+++|+.|+|++|+++|.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|||++|++++..+. ....+..|
T Consensus 630 ~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred ccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 456677777777777777777777777777777777777777777777777777777777777754332 33446677
Q ss_pred EeecCCcccccccccCccccCCCCCcccccccccCCCC
Q 002121 387 ILVGNPVCTATLANTNYCQLQQPTTKAYSTSLANCGGK 424 (964)
Q Consensus 387 ~l~~Np~c~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~ 424 (964)
+|++|++... ++... ..+......+..+...||.|
T Consensus 710 ~ls~N~l~g~-iP~~~--~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 710 DLSNNNLSGP-IPEMG--QFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp ECCSSEEEEE-CCSSS--SGGGSCGGGGCSCTEEESTT
T ss_pred ECcCCccccc-CCCch--hhccCCHHHhcCCchhcCCC
Confidence 7777775321 22111 11222333455566677765
No 174
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.6e-38 Score=348.76 Aligned_cols=249 Identities=24% Similarity=0.356 Sum_probs=205.0
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357888999999999999999975 58899999986542 23345788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++++|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 94 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 99999999999887543 6899999999999999999999988 999999999999999999999999999876533
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... +.......... .....++
T Consensus 169 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~----~~~~~~~-- 239 (294)
T 2rku_A 169 GE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-ETYLRIKKNEY----SIPKHIN-- 239 (294)
T ss_dssp TC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTTCC----CCCTTSC--
T ss_pred cc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhhccC----CCccccC--
Confidence 22 223456999999999999888999999999999999999999999754322 22222221111 0111111
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
..+.+++.+||+.||++||++.|+++.
T Consensus 240 ---------~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 240 ---------PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ---------HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---------HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 346689999999999999999999873
No 175
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2e-38 Score=349.93 Aligned_cols=250 Identities=22% Similarity=0.349 Sum_probs=201.6
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEe
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
.++|...+.||+|+||.||+|+.. +|+.||+|+++.........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 457888999999999999999964 7899999999865544556789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE---CCCCcEEEeecccceeecCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL---DENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DFGla~~~~~~ 781 (964)
+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 88 VSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred CCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 99999999986543 5899999999999999999999988 9999999999999 78899999999999764322
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ............. .. ..
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~----~~----~~ 229 (304)
T 2jam_A 163 ----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIKEGYYE----FE----SP 229 (304)
T ss_dssp ----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHCCCC----CC----TT
T ss_pred ----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHcCCCC----CC----cc
Confidence 12345699999999999999999999999999999999999999965432 2222222111110 00 01
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
... .....+.+++.+||+.||++||++.|+++
T Consensus 230 ~~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 230 FWD---DISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTT---TSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccc---cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111 11145678999999999999999999986
No 176
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.4e-39 Score=357.20 Aligned_cols=261 Identities=21% Similarity=0.340 Sum_probs=195.8
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcch-hHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEe
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQG-GLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
++|...+.||+|+||+||+|+.. +|+.||||++....... ...+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 47888999999999999999975 78999999987543322 22456799999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKG 784 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 784 (964)
++ |+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-- 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 154 (324)
T ss_dssp CS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCc--
Confidence 98 59999887653 46899999999999999999999988 9999999999999999999999999998654322
Q ss_pred ceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCch--hHHHHHHHhccCcccccccccccC--
Q 002121 785 HVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKY--VVREVRTAMNRDDEEHYGLTEMMD-- 859 (964)
Q Consensus 785 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d-- 859 (964)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ....+........... ......
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~ 232 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEET--WPGILSNE 232 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT--STTGGGCH
T ss_pred cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHh--chhhhcch
Confidence 22334568999999999876 5689999999999999999999999965432 1222222222111110 111000
Q ss_pred ------------ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 860 ------------PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 860 ------------~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..+..........+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000011112245679999999999999999999986
No 177
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-38 Score=354.79 Aligned_cols=266 Identities=25% Similarity=0.349 Sum_probs=198.7
Q ss_pred HhhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc-----hhHHHHHHHHHHHhcCCCCccceeEEEEeeCc
Q 002121 624 KCSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ-----GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE 697 (964)
Q Consensus 624 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 697 (964)
...++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999964 6899999998753221 12468899999999999999999999999999
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
.++||||+++ +|.+++.... ..+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred eEEEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 9999999986 8998887643 46899999999999999999999988 99999999999999999999999999987
Q ss_pred ecCCCCCceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhc---cCcccc--
Q 002121 778 VSDSSKGHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMN---RDDEEH-- 851 (964)
Q Consensus 778 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~-- 851 (964)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|.+||..... .+.+...+. ......
T Consensus 162 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~ 238 (346)
T 1ua2_A 162 FGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFETLGTPTEEQWP 238 (346)
T ss_dssp TTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTSS
T ss_pred ccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHcCCCChhhhh
Confidence 64332 22334578999999999875 4588999999999999999999999865433 222222221 111000
Q ss_pred --cccccccCc------cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 852 --YGLTEMMDP------TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 852 --~~~~~~~d~------~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
....+.+.. .+..........+.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000010000 0000011122567899999999999999999999863
No 178
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=356.52 Aligned_cols=258 Identities=25% Similarity=0.395 Sum_probs=203.1
Q ss_pred hhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEe----eCceE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFE----QGEQM 699 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~ 699 (964)
..++|...+.||+|+||.||+|.. .+|+.||||++..........+.+|++++++++||||+++++++.. ....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 346899999999999999999996 5789999999876655566789999999999999999999999973 34789
Q ss_pred EEEEeccCCChhhhhcCC--CCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 700 LVYEFMANGTLRESLSGR--SGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
+||||+++|+|.+++... .+..+++.+++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999999988752 2346999999999999999999999988 99999999999999999999999999876
Q ss_pred ecCCCCCc-------eeecccccCcccCccccccCC---CCCchhHHHHHHHHHHHHhCCCCCCC----CchhHHHHHHH
Q 002121 778 VSDSSKGH-------VSTQVKGTMGYLDPEYYMTQQ---LTEKSDVYSFGVVMLELITAKQPIEK----GKYVVREVRTA 843 (964)
Q Consensus 778 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~sDv~S~Gvvl~elltg~~p~~~----~~~~~~~~~~~ 843 (964)
........ ......||+.|+|||++.... ++.++||||||+++|||++|+.||.. ........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~--- 260 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV--- 260 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH---
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh---
Confidence 43211100 012345799999999987543 78999999999999999999999852 11111111
Q ss_pred hccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 002121 844 MNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLL 902 (964)
Q Consensus 844 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 902 (964)
..... ... .+ .....+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 261 -~~~~~----~~~--~~-------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 261 -QNQLS----IPQ--SP-------RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp -HCC------CCC--CT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred -hccCC----CCc--cc-------cCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 11000 000 01 11245678999999999999999999999998763
No 179
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.9e-38 Score=347.51 Aligned_cols=263 Identities=22% Similarity=0.330 Sum_probs=202.3
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
++|+..+.||+|+||.||+|+.. +|+.||||+++.... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999975 789999999875432 223578899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 783 (964)
|++ |+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 998 69999998765456899999999999999999999988 9999999999999999999999999998654321
Q ss_pred CceeecccccCcccCccccccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhc---cCcccc--------
Q 002121 784 GHVSTQVKGTMGYLDPEYYMTQQ-LTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMN---RDDEEH-------- 851 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~-------- 851 (964)
.......||+.|+|||++.+.. ++.++|||||||++|||++|+.||....... ....... ......
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 158 -RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp -BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred -cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhcCc
Confidence 1223346899999999998755 7899999999999999999999997544322 2222111 111000
Q ss_pred ---cccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 852 ---YGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 852 ---~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..........+..........+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000011111111111112255779999999999999999999985
No 180
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.7e-38 Score=355.63 Aligned_cols=249 Identities=24% Similarity=0.356 Sum_probs=205.2
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|...+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 457888999999999999999965 57899999986542 23345788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++++|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 120 ~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999987543 6899999999999999999999988 999999999999999999999999999876533
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... +.......... .....++
T Consensus 195 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~----~~~~~~~-- 265 (335)
T 2owb_A 195 GE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-ETYLRIKKNEY----SIPKHIN-- 265 (335)
T ss_dssp TC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCC----CCCTTSC--
T ss_pred cc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHHhcCCC----CCCccCC--
Confidence 22 223456999999999999888999999999999999999999999754322 22222211111 0111111
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
..+.+++.+||+.||++||++.|+++.
T Consensus 266 ---------~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 266 ---------PVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ---------HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---------HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 345689999999999999999999863
No 181
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.1e-38 Score=380.13 Aligned_cols=197 Identities=14% Similarity=0.064 Sum_probs=149.5
Q ss_pred CcccCCCCCCcEEEcccCcCccccC-ccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCC
Q 002121 233 PESLGYVQTLEVLRLDRNALTGKVP-TNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFST 310 (964)
Q Consensus 233 p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 310 (964)
|..+..+++|+.|++++|++++..| ..|.++++|++|+|++|.+++..+. +..+++|++|++++|.+++...|..+..
T Consensus 392 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 471 (606)
T 3vq2_A 392 SANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFAN 471 (606)
T ss_dssp CCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred hhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhcc
Confidence 3455566666666666666665555 5677777777777777777776554 7778888888888888864356888899
Q ss_pred CCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccC--CCc-ccceeE
Q 002121 311 LPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLG--SGI-KNYTLI 387 (964)
Q Consensus 311 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~--~~~-~l~~l~ 387 (964)
+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|+|+.+|.. ... .++.|+
T Consensus 472 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~ 551 (606)
T 3vq2_A 472 TTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFN 551 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEE
T ss_pred CCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999865 333 378899
Q ss_pred eecCC-cccccccccCccccCCCCCcccccccccCCCCCCCCCC
Q 002121 388 LVGNP-VCTATLANTNYCQLQQPTTKAYSTSLANCGGKSCPPEQ 430 (964)
Q Consensus 388 l~~Np-~c~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 430 (964)
+.+|| .|+|.+.+...|.... ...+.......|..|....++
T Consensus 552 l~~N~~~c~c~~~~~~~~l~~~-~~~~~~~~~~~C~~p~~~~~~ 594 (606)
T 3vq2_A 552 LTNNSVACICEHQKFLQWVKEQ-KQFLVNVEQMTCATPVEMNTS 594 (606)
T ss_dssp CCSCCCCCSSTTHHHHTTTTTS-SSSBSSGGGCCCC--------
T ss_pred ccCCCcccCCccHHHHHHHHcC-cccccCCccceeCCChHhCCC
Confidence 99999 8999999888884333 333334556678777544443
No 182
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=5.8e-38 Score=346.12 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=200.6
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCC----cchhHHHHHHHHHHHhcCCCCccceeEEEE--eeCce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGS----MQGGLEFKTEIELLSRVHHKNLVGLVGFCF--EQGEQ 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~--~~~~~ 698 (964)
.++|...+.||+|+||.||+|.. .+++.||+|+++... ......+.+|++++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999996 468999999987532 233467999999999999999999999984 45688
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
++||||+++| |.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 777776655567999999999999999999999988 999999999999999999999999999876
Q ss_pred cCCCCCceeecccccCcccCccccccCC--CCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccccc
Q 002121 779 SDSSKGHVSTQVKGTMGYLDPEYYMTQQ--LTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTE 856 (964)
Q Consensus 779 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (964)
.............||+.|+|||++.+.. ++.++||||||+++|||++|+.||.... ..+.......... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~i~~~~~----~~~~ 234 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-IYKLFENIGKGSY----AIPG 234 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHCCC----CCCS
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-HHHHHHHHhcCCC----CCCC
Confidence 5433333444567999999999987643 4789999999999999999999997533 2222222211111 0111
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 857 MMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 857 ~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
.. ...+.+++.+||+.||++||++.|+++.
T Consensus 235 ----~~-------~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 235 ----DC-------GPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----SS-------CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----cc-------CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11 1346689999999999999999999864
No 183
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.1e-38 Score=382.97 Aligned_cols=251 Identities=27% Similarity=0.412 Sum_probs=198.7
Q ss_pred ceeecCCcEEEEEEEec---CCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEeccC
Q 002121 633 NEIGSGGYGKVYRGMLS---DGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMAN 707 (964)
Q Consensus 633 ~~lG~G~fg~Vy~~~~~---~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~~~ 707 (964)
+.||+|+||+||+|.+. .++.||||+++.... ...+++.+|+++|++++|||||++++++. .+..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 57999999999999753 467899999976433 23467999999999999999999999996 4568999999999
Q ss_pred CChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC-Cce
Q 002121 708 GTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK-GHV 786 (964)
Q Consensus 708 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~-~~~ 786 (964)
|+|.+++.... .+++.+++.++.||+.||+|||+.+ ||||||||+|||+++++.+||+|||+++....... ...
T Consensus 454 g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 99999997543 6899999999999999999999988 99999999999999999999999999987654322 122
Q ss_pred eecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCcccccccccccCccchhh
Q 002121 787 STQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNT 865 (964)
Q Consensus 787 ~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 865 (964)
.....+|+.|+|||++....++.++|||||||++|||++ |+.||..... . .+...+...... ... ..
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-~-~~~~~i~~~~~~--~~p----~~---- 596 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-S-EVTAMLEKGERM--GCP----AG---- 596 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-H-HHHHHHHTTCCC--CCC----TT----
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-H-HHHHHHHcCCCC--CCC----CC----
Confidence 334457889999999999999999999999999999998 9999964332 1 122222221100 011 11
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHh
Q 002121 866 VLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQN 904 (964)
Q Consensus 866 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 904 (964)
....+.+++.+||+.||++||++.+|++.|+.+..+
T Consensus 597 ---~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 597 ---CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp ---CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 124567899999999999999999999999988754
No 184
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.6e-38 Score=357.67 Aligned_cols=263 Identities=19% Similarity=0.337 Sum_probs=207.8
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcch-----------------hHHHHHHHHHHHhcCCCCccce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQG-----------------GLEFKTEIELLSRVHHKNLVGL 688 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~nIv~l 688 (964)
.++|...+.||+|+||.||+|.. +|+.||||++....... ...+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 89999999986432211 1679999999999999999999
Q ss_pred eEEEEeeCceEEEEEeccCCChhhh------hcCCCCCccchHHHHHHHHHHHHHHHHHhh-cCCCCeeccCCCCCcEEE
Q 002121 689 VGFCFEQGEQMLVYEFMANGTLRES------LSGRSGIHLDWKRRLRIALGSARGLAYLHE-LANPPIIHRDVKSTNILL 761 (964)
Q Consensus 689 ~~~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl 761 (964)
++++.+.+..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ .+ |+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence 9999999999999999999999999 665435679999999999999999999998 77 9999999999999
Q ss_pred CCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccC-CCCC-chhHHHHHHHHHHHHhCCCCCCCCchhHHH
Q 002121 762 DENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQ-QLTE-KSDVYSFGVVMLELITAKQPIEKGKYVVRE 839 (964)
Q Consensus 762 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDv~S~Gvvl~elltg~~p~~~~~~~~~~ 839 (964)
+.++.+||+|||+++..... ......||+.|+|||++.+. .++. ++||||||+++|||++|+.||.......+.
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 99999999999999876432 23446799999999999877 6666 999999999999999999999765443333
Q ss_pred HHHHhccCcccccccccccCccchh----hhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 840 VRTAMNRDDEEHYGLTEMMDPTIRN----TVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~d~~l~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
....................+.... ........+.+++.+||+.||++||++.|+++
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 3333322211110000000000000 00112245779999999999999999999975
No 185
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.5e-38 Score=356.18 Aligned_cols=258 Identities=22% Similarity=0.351 Sum_probs=206.9
Q ss_pred HHHHHHhhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc--------hhHHHHHHHHHHHhc-CCCCccce
Q 002121 619 YDELKKCSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ--------GGLEFKTEIELLSRV-HHKNLVGL 688 (964)
Q Consensus 619 ~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~H~nIv~l 688 (964)
+.......++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+++++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3445556678999999999999999999975 7999999998754321 134578999999999 79999999
Q ss_pred eEEEEeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEE
Q 002121 689 VGFCFEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAK 768 (964)
Q Consensus 689 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~k 768 (964)
++++...+..++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+|
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEE
Confidence 99999999999999999999999999754 36899999999999999999999988 99999999999999999999
Q ss_pred EeecccceeecCCCCCceeecccccCcccCcccccc------CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHH
Q 002121 769 VADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMT------QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRT 842 (964)
Q Consensus 769 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~ 842 (964)
|+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....
T Consensus 241 l~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~ 316 (365)
T 2y7j_A 241 LSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-LMLRM 316 (365)
T ss_dssp ECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH
T ss_pred EEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-HHHHH
Confidence 999999987754322 234679999999999863 35889999999999999999999999654322 22222
Q ss_pred HhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 843 AMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 843 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
....... ...... ......+.+++.+||+.||++||++.|+++
T Consensus 317 i~~~~~~--------~~~~~~---~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 317 IMEGQYQ--------FSSPEW---DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHTCCC--------CCHHHH---SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhCCCC--------CCCccc---ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2111110 000000 011244678999999999999999999985
No 186
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=344.67 Aligned_cols=252 Identities=24% Similarity=0.361 Sum_probs=198.6
Q ss_pred cCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEec
Q 002121 627 NNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFM 705 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~~ 705 (964)
++|.....||+|+||.||+|.. .+++.||||++..........+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 3455567999999999999995 568899999998766555678999999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCC-CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC-CCcEEEeecccceeecCCCC
Q 002121 706 ANGTLRESLSGRS-GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE-NLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 706 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-~~~~kl~DFGla~~~~~~~~ 783 (964)
++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~- 177 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN- 177 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence 9999999997653 345778999999999999999999988 999999999999987 8999999999998764322
Q ss_pred CceeecccccCcccCccccccCC--CCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 784 GHVSTQVKGTMGYLDPEYYMTQQ--LTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
.......||+.|+|||++..+. ++.++||||||+++|||++|+.||................. ..+.
T Consensus 178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~----------~~~~ 246 (295)
T 2clq_A 178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK----------VHPE 246 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC----------CCCC
T ss_pred -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc----------cccc
Confidence 1223456899999999987643 78999999999999999999999964322221111110000 0011
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
+... ....+.+++.+||+.||++||++.|+++
T Consensus 247 ~~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 247 IPES---MSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCTT---SCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cccc---CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111 1145668999999999999999999975
No 187
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5.3e-38 Score=343.91 Aligned_cols=248 Identities=27% Similarity=0.426 Sum_probs=199.6
Q ss_pred CCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCC--cchhHHHHHHHHHHHhcCCCCccceeEEEEee----CceEE
Q 002121 628 NFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGS--MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ----GEQML 700 (964)
Q Consensus 628 ~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----~~~~l 700 (964)
.|...+.||+|+||+||+|.. .++..||+|++.... ......+.+|++++++++||||+++++++... ...++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 466778999999999999996 468899999987543 23345789999999999999999999998763 45899
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEEC-CCCcEEEeecccceeec
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLD-ENLTAKVADFGLSKLVS 779 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-~~~~~kl~DFGla~~~~ 779 (964)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||||||+|||++ +++.+||+|||++....
T Consensus 107 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999999754 35899999999999999999999865 4699999999999997 88999999999997543
Q ss_pred CCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccC
Q 002121 780 DSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 780 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
.. ......||+.|+|||++. +.++.++||||+||++|||++|+.||...................
T Consensus 184 ~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------- 248 (290)
T 1t4h_A 184 AS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP---------- 248 (290)
T ss_dssp TT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC----------
T ss_pred cc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc----------
Confidence 32 223456999999999876 568999999999999999999999997655444444333222110
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
...... ....+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 ASFDKV---AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGGGGC---CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccCCC---CCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 011111 1135678999999999999999999985
No 188
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.5e-38 Score=358.10 Aligned_cols=272 Identities=25% Similarity=0.321 Sum_probs=201.9
Q ss_pred ccHHHHHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcch-----------hHHHHHHHHHHHhcCCCCc
Q 002121 617 FSYDELKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQG-----------GLEFKTEIELLSRVHHKNL 685 (964)
Q Consensus 617 ~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~nI 685 (964)
....++....++|...+.||+|+||.||+|...+|+.||||++....... .+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 45678889999999999999999999999998889999999986432211 2578999999999999999
Q ss_pred cceeEEEEee-----CceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEE
Q 002121 686 VGLVGFCFEQ-----GEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNIL 760 (964)
Q Consensus 686 v~l~~~~~~~-----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NIL 760 (964)
+++++++... ...++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl 166 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNIL 166 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEE
Confidence 9999999653 35799999998 68888887543 46999999999999999999999988 999999999999
Q ss_pred ECCCCcEEEeecccceeecCCCCCceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhH--
Q 002121 761 LDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVV-- 837 (964)
Q Consensus 761 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~-- 837 (964)
++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 243 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243 (362)
T ss_dssp ECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred EcCCCCEEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999999999999854432 22334578999999999876 678999999999999999999999997543211
Q ss_pred HHHHHHhccCcccc--------------cccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 838 REVRTAMNRDDEEH--------------YGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 838 ~~~~~~~~~~~~~~--------------~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..+........... .....................+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 11111111111000 000000000111111122345779999999999999999999985
No 189
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8.4e-38 Score=392.48 Aligned_cols=119 Identities=23% Similarity=0.157 Sum_probs=70.2
Q ss_pred CCccEEecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCC-CCCCCCcccchhhccccccccCcCCccc
Q 002121 55 SWEGVTCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSL-SPRIGDLQKLNILILAGCGFTGNIPDEI 133 (964)
Q Consensus 55 ~w~gv~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~-p~~l~~l~~L~~L~L~~n~l~~~~p~~~ 133 (964)
+|..|.+...+++.|+|++|.+++..+..|.++++|++|+|++| ...+.+ |..|+++++|++|+|++|.|++..|..|
T Consensus 15 ~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n-~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 15 NLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQ-YTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTT-CCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCC-CCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 56666664467778888888777766666666666666666666 333333 4555556666666666665555555555
Q ss_pred CCCCCccEEEcccCcccCcCCCc--CCCccccccccccccccc
Q 002121 134 GNLAELSFLALNSNNFSGRIPPS--LGKLSQLYWLDLADNQLT 174 (964)
Q Consensus 134 ~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~ 174 (964)
.++++|++|+|++|.+++.+|.. |.++++|++|+|++|.++
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~ 136 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIR 136 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCC
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCccc
Confidence 55555555555555555444333 555555555555555554
No 190
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=6.7e-38 Score=345.42 Aligned_cols=249 Identities=24% Similarity=0.398 Sum_probs=205.3
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
.+.|...+.||+|+||.||+|+. .+|+.||||++..... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 35688899999999999999985 4689999999875543 345679999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 783 (964)
|+++++|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 101 ~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 174 (303)
T 3a7i_A 101 YLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174 (303)
T ss_dssp CCTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred eCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence 99999999999753 5899999999999999999999988 99999999999999999999999999987654321
Q ss_pred CceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccch
Q 002121 784 GHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIR 863 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (964)
......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .......... ..+....
T Consensus 175 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~-------~~~~~~~- 243 (303)
T 3a7i_A 175 --KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK-VLFLIPKNNP-------PTLEGNY- 243 (303)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCC-------CCCCSSC-
T ss_pred --ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH-HHHHhhcCCC-------CCCcccc-
Confidence 2234568999999999999999999999999999999999999997543221 1111111110 0111111
Q ss_pred hhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 864 NTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 864 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
...+.+++.+||+.||++||++.|+++.
T Consensus 244 ------~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 244 ------SKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ------CHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ------CHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 1346689999999999999999999874
No 191
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.6e-38 Score=345.33 Aligned_cols=246 Identities=24% Similarity=0.391 Sum_probs=203.1
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57888999999999999999965 67899999986432 122357899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999997643 5899999999999999999999988 9999999999999999999999999997654321
Q ss_pred CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTI 862 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 862 (964)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...... ............ .. +.+
T Consensus 169 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~----~~----~~~ 235 (284)
T 2vgo_A 169 ----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-ETHRRIVNVDLK----FP----PFL 235 (284)
T ss_dssp ----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTTCCC----CC----TTS
T ss_pred ----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-HHHHHHhccccC----CC----CcC
Confidence 23456899999999999999999999999999999999999999754322 222222211110 11 111
Q ss_pred hhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 863 RNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 863 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
...+.+++.+|++.||++||++.|+++.
T Consensus 236 -------~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 236 -------SDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp -------CHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred -------CHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 1345689999999999999999999863
No 192
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.5e-38 Score=372.67 Aligned_cols=246 Identities=21% Similarity=0.348 Sum_probs=201.4
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc---chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM---QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|...+.||+|+||+||+|+.. +|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 357888899999999999999975 699999999865322 2235688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCC--CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeec
Q 002121 702 YEFMANGTLRESLSGRS--GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVS 779 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 779 (964)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999987643 346999999999999999999999988 9999999999999999999999999998765
Q ss_pred CCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc---hhHHHHHHHhccCccccccccc
Q 002121 780 DSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGK---YVVREVRTAMNRDDEEHYGLTE 856 (964)
Q Consensus 780 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 856 (964)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............... ...
T Consensus 341 ~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~----~p~ 414 (543)
T 3c4z_A 341 AGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT----YPD 414 (543)
T ss_dssp TTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC----CCT
T ss_pred CCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccC----CCc
Confidence 4322 2234579999999999999999999999999999999999999997432 112222222211110 111
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCH
Q 002121 857 MMDPTIRNTVLLGFRRYLELALQCVEESATDRPTM 891 (964)
Q Consensus 857 ~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 891 (964)
.+ ...+.+++.+||+.||++||++
T Consensus 415 ~~-----------s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 415 KF-----------SPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp TS-----------CHHHHHHHHHHSCSSGGGSCCC
T ss_pred cc-----------CHHHHHHHHHhccCCHhHCCCC
Confidence 11 1345689999999999999976
No 193
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.9e-38 Score=346.55 Aligned_cols=244 Identities=20% Similarity=0.345 Sum_probs=198.0
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC--cchhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS--MQGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|...+.||+|+||+||+|+.. +|+.||||+++... .....++.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467889999999999999999975 79999999987543 23445788999999999 999999999999999999999
Q ss_pred EEeccCCChhhhhcCCC--CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC----------------
Q 002121 702 YEFMANGTLRESLSGRS--GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE---------------- 763 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---------------- 763 (964)
|||+++|+|.+++.... ...+++.++..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997542 245899999999999999999999988 999999999999984
Q ss_pred ---CCcEEEeecccceeecCCCCCceeecccccCcccCccccccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHH
Q 002121 764 ---NLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVVMLELITAKQPIEKGKYVVRE 839 (964)
Q Consensus 764 ---~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~ 839 (964)
...+||+|||+++...... ...||+.|+|||++.+. .++.++|||||||++|||++|.+++........
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~- 239 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE- 239 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH-
T ss_pred cCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH-
Confidence 4489999999998765432 23589999999999765 566899999999999999999987754432211
Q ss_pred HHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 840 VRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
+ ..... . .+...+ ...+.+++.+||+.||++||++.|+++
T Consensus 240 ~---~~~~~------~-~~~~~~-------~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 240 I---RQGRL------P-RIPQVL-------SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp H---HTTCC------C-CCSSCC-------CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H---HcCCC------C-CCCccc-------CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1 11110 0 011111 145668999999999999999999975
No 194
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.8e-38 Score=354.48 Aligned_cols=264 Identities=19% Similarity=0.319 Sum_probs=194.5
Q ss_pred HhhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcch--hHHHHHHHHHHHhcCCCCccceeEEEEeeCceEE
Q 002121 624 KCSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQG--GLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 624 ~~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 700 (964)
...++|...+.||+|+||+||+|+. .+|+.||||+++...... ...+.+|++++++++||||+++++++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3456899999999999999999995 478999999987543322 3467899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE-----CCCCcEEEeecccc
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL-----DENLTAKVADFGLS 775 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl-----~~~~~~kl~DFGla 775 (964)
||||++ |+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||++
T Consensus 111 v~e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 999998 49999997654 5899999999999999999999988 9999999999999 45566999999999
Q ss_pred eeecCCCCCceeecccccCcccCccccccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhc---cCcccc
Q 002121 776 KLVSDSSKGHVSTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMN---RDDEEH 851 (964)
Q Consensus 776 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~ 851 (964)
+...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .+..... ......
T Consensus 185 ~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 185 RAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDDTT 261 (329)
T ss_dssp HHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTT
T ss_pred cccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCchhh
Confidence 8764322 223345689999999999874 58999999999999999999999997544322 2222211 111000
Q ss_pred c-----------ccccccCccchhh-hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 852 Y-----------GLTEMMDPTIRNT-VLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 852 ~-----------~~~~~~d~~l~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
. .........+... .......+.+++.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 0000000111110 0012245779999999999999999999975
No 195
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4.7e-38 Score=341.56 Aligned_cols=248 Identities=23% Similarity=0.369 Sum_probs=195.1
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|...+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 467889999999999999999975 78999999986432 12345788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++++|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 99999999999997543 5899999999999999999999998 999999999999999999999999999876433
Q ss_pred CCCceeecccccCcccCccccccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDP 860 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 860 (964)
. ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||..... ............ ...+.+
T Consensus 165 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~----~~~~~~-- 234 (276)
T 2h6d_A 165 E---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-PTLFKKIRGGVF----YIPEYL-- 234 (276)
T ss_dssp ---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCC----CCCTTS--
T ss_pred c---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHhhcCcc----cCchhc--
Confidence 2 2234568999999999987765 5899999999999999999999965332 122222111111 011111
Q ss_pred cchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 861 TIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 861 ~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
...+.+++.+||+.||++||++.|+++.
T Consensus 235 ---------~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 235 ---------NRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---------CHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---------CHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1346689999999999999999999873
No 196
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=359.05 Aligned_cols=251 Identities=24% Similarity=0.323 Sum_probs=200.1
Q ss_pred hcCCCccceeecCCcEEEEEEEe----cCCcEEEEEEecCCCc----chhHHHHHHHHHHHhc-CCCCccceeEEEEeeC
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML----SDGQVVAIKRAQQGSM----QGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQG 696 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~----~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 696 (964)
.++|...+.||+|+||+||+|+. .+|+.||||+++.... .....+.+|+++++++ +||||+++++++.+.+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788999999999999999997 3689999999875321 2334678899999999 6999999999999999
Q ss_pred ceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 697 EQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 697 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
..++||||+++|+|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999997643 5899999999999999999999988 9999999999999999999999999998
Q ss_pred eecCCCCCceeecccccCcccCcccccc--CCCCCchhHHHHHHHHHHHHhCCCCCCCCc---hhHHHHHHHhccCcccc
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYMT--QQLTEKSDVYSFGVVMLELITAKQPIEKGK---YVVREVRTAMNRDDEEH 851 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~S~Gvvl~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~ 851 (964)
....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ...............
T Consensus 208 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-- 284 (355)
T 1vzo_A 208 EFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP-- 284 (355)
T ss_dssp ECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC--
T ss_pred ecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC--
Confidence 7543221 22334679999999999985 457899999999999999999999996321 222222222211110
Q ss_pred cccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 002121 852 YGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRP-----TMSEVVKA 897 (964)
Q Consensus 852 ~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 897 (964)
.. +.+ ...+.+++.+||+.||++|| ++.|+++.
T Consensus 285 --~~----~~~-------~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 285 --YP----QEM-------SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp --CC----TTS-------CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred --CC----ccc-------CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11 111 13456899999999999999 89998753
No 197
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=9.1e-39 Score=358.49 Aligned_cols=254 Identities=24% Similarity=0.402 Sum_probs=201.5
Q ss_pred HHhhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcc-hhHHHHHHHHH-HHhcCCCCccceeEEEEeeCceE
Q 002121 623 KKCSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQ-GGLEFKTEIEL-LSRVHHKNLVGLVGFCFEQGEQM 699 (964)
Q Consensus 623 ~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~-~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~ 699 (964)
....++|...+.||+|+||+||+|+. .+|+.||||+++..... ...++..|+.+ ++.++||||+++++++.+.+..+
T Consensus 47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 34467888999999999999999996 57899999999765332 33455566655 77889999999999999999999
Q ss_pred EEEEeccCCChhhhhcCC--CCCccchHHHHHHHHHHHHHHHHHhhc-CCCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 700 LVYEFMANGTLRESLSGR--SGIHLDWKRRLRIALGSARGLAYLHEL-ANPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
+||||+++ +|.+++... ....+++..+..++.||+.||+|||+. + |+||||||+|||++.++.+||+|||+++
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 99999985 998887631 234699999999999999999999986 7 9999999999999999999999999998
Q ss_pred eecCCCCCceeecccccCcccCccccc----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccc
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYM----TQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHY 852 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 852 (964)
..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||.........+.........
T Consensus 203 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--- 276 (340)
T 3an0_A 203 YLVDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP--- 276 (340)
T ss_dssp HHSCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCC---
T ss_pred ecccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCC---
Confidence 66432 1223356999999999964 3478999999999999999999999997544433334333322211
Q ss_pred ccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 853 GLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 853 ~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..... .....+.+++.+||+.||++||++.|+++
T Consensus 277 ---~~~~~-------~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 277 ---QLPAD-------KFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ---CCCGG-------GSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCCcc-------cCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 00000 11245678999999999999999999986
No 198
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.7e-38 Score=365.68 Aligned_cols=264 Identities=20% Similarity=0.299 Sum_probs=207.6
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCC-CccceeEEEEeeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHK-NLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~-nIv~l~~~~~~~~~~~lV~E 703 (964)
.++|.+.++||+|+||.||+|+. .+|+.||||++...... .++.+|+++++.++|+ +|..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999996 57899999988754332 3688999999999874 55566666667778899999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE---CCCCcEEEeecccceeecC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL---DENLTAKVADFGLSKLVSD 780 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DFGla~~~~~ 780 (964)
|+ +++|.+++.... ..+++.+++.|+.||+.||+|||+.+ ||||||||+|||+ +.++.+||+|||+++....
T Consensus 84 ~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99 999999997543 36999999999999999999999988 9999999999999 6889999999999998765
Q ss_pred CCCC-----ceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCch--hHHHHHHHhccCcccccc
Q 002121 781 SSKG-----HVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKY--VVREVRTAMNRDDEEHYG 853 (964)
Q Consensus 781 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~ 853 (964)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+.+........
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~----- 233 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV----- 233 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH-----
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc-----
Confidence 4321 112356799999999999999999999999999999999999999974221 1222211111100
Q ss_pred cccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhCC
Q 002121 854 LTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQNDG 906 (964)
Q Consensus 854 ~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 906 (964)
...+..........+.+++.+||+.+|++||++.+|++.|+.++...+
T Consensus 234 -----~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~ 281 (483)
T 3sv0_A 234 -----ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG 281 (483)
T ss_dssp -----HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred -----cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC
Confidence 000000001112467799999999999999999999999999987554
No 199
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-38 Score=368.88 Aligned_cols=195 Identities=27% Similarity=0.424 Sum_probs=154.9
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEee-----Cc
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ-----GE 697 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 697 (964)
.++|.+.+.||+|+||+||+|+.. +|+.||||++..... ...+++.+|+++|++++|||||++++++... +.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 467999999999999999999954 789999999875432 2345788999999999999999999999543 56
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
.|+||||+. |+|.+++... ..+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+|+.
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeccc-cchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchh
Confidence 899999985 6999999764 36999999999999999999999988 99999999999999999999999999987
Q ss_pred ecCCCCC-------------------------ceeecccccCcccCcccc-ccCCCCCchhHHHHHHHHHHHHhC
Q 002121 778 VSDSSKG-------------------------HVSTQVKGTMGYLDPEYY-MTQQLTEKSDVYSFGVVMLELITA 826 (964)
Q Consensus 778 ~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDv~S~Gvvl~elltg 826 (964)
....... ...+..+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 6432211 123456789999999986 456799999999999999999993
No 200
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.6e-38 Score=353.38 Aligned_cols=264 Identities=23% Similarity=0.366 Sum_probs=200.1
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357888999999999999999975 5899999998654433 2345789999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 104 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 9999999998876543 5899999999999999999999988 9999999999999999999999999998664332
Q ss_pred CCceeecccccCcccCccccccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHh--cc-----------Cc
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAM--NR-----------DD 848 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~--~~-----------~~ 848 (964)
.......||+.|+|||++.+. .++.++|||||||++|||++|+.||.............. .. ..
T Consensus 179 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 179 --EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred --cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 223345699999999999765 789999999999999999999999975443222111110 00 00
Q ss_pred c-cccccccccCcc-chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 849 E-EHYGLTEMMDPT-IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 849 ~-~~~~~~~~~d~~-l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
. ......+..... ...........+.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 000011111100 00111122356789999999999999999999976
No 201
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=352.41 Aligned_cols=260 Identities=25% Similarity=0.424 Sum_probs=201.4
Q ss_pred ccHHHHHHhhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhc-CCCCccceeEEEEe
Q 002121 617 FSYDELKKCSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRV-HHKNLVGLVGFCFE 694 (964)
Q Consensus 617 ~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~ 694 (964)
+++.++....++|...+.||+|+||.||+|+. .+|+.||||++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 44445566778999999999999999999996 478999999987543 3346789999999999 79999999999987
Q ss_pred ------eCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEE
Q 002121 695 ------QGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAK 768 (964)
Q Consensus 695 ------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~k 768 (964)
.+..++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEE
Confidence 457899999999999999998655457899999999999999999999988 99999999999999999999
Q ss_pred EeecccceeecCCCCCceeecccccCcccCccccc-----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002121 769 VADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYM-----TQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTA 843 (964)
Q Consensus 769 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~ 843 (964)
|+|||++....... .......||+.|+|||++. ...++.++|||||||++|||++|+.||....... .....
T Consensus 170 l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~ 246 (326)
T 2x7f_A 170 LVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-ALFLI 246 (326)
T ss_dssp ECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHH
T ss_pred EeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHh
Confidence 99999998654321 1223456899999999986 5678999999999999999999999996543322 11111
Q ss_pred hccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 844 MNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 844 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..... .......+ ...+.+++.+||+.||++||++.|+++
T Consensus 247 ~~~~~------~~~~~~~~-------~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 247 PRNPA------PRLKSKKW-------SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHSCC------CCCSCSCS-------CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hcCcc------ccCCcccc-------CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11111 11111111 145678999999999999999999986
No 202
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=6.2e-38 Score=369.86 Aligned_cols=250 Identities=24% Similarity=0.354 Sum_probs=198.2
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC--cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS--MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
.+.|...+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++|||||++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457889999999999999999965 68999999987543 233567899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC---CCcEEEeecccceeec
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE---NLTAKVADFGLSKLVS 779 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DFGla~~~~ 779 (964)
|||++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 116 e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 9999999999886543 5899999999999999999999988 999999999999976 4559999999998765
Q ss_pred CCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccC
Q 002121 780 DSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 780 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
... ......||+.|+|||++. +.++.++||||+||++|||++|+.||..... .+.+......... ...
T Consensus 191 ~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~-------~~~ 258 (494)
T 3lij_A 191 NQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-QEILRKVEKGKYT-------FDS 258 (494)
T ss_dssp TTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCCC-------CCS
T ss_pred CCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCC-------CCc
Confidence 432 234457999999999876 5699999999999999999999999964332 2222222221110 001
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
+.+. .....+.+++.+||+.||++|||+.|+++
T Consensus 259 ~~~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 259 PEWK----NVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp GGGT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcc----cCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 1111 11134668999999999999999999985
No 203
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-38 Score=356.34 Aligned_cols=258 Identities=26% Similarity=0.372 Sum_probs=195.7
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCCCCccceeEEEEeeC------
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHHKNLVGLVGFCFEQG------ 696 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------ 696 (964)
.++|...+.||+|+||.||+|.. .+|+.||||++...... ..+++.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46899999999999999999996 47999999998654322 3456889999999999999999999997653
Q ss_pred ceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 697 EQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 697 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
..++||||+ +++|.+++... .+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 459999999 78999999763 5899999999999999999999988 9999999999999999999999999998
Q ss_pred eecCCCCCceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhc---cCccccc
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMN---RDDEEHY 852 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~ 852 (964)
..... .+...||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +.+...+. ....+..
T Consensus 177 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 177 QADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp ECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHH
T ss_pred ccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHH
Confidence 76432 234568999999999877 67999999999999999999999999754332 22222211 1110000
Q ss_pred -------------ccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 853 -------------GLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 853 -------------~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.+.......+..........+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 00000011111111122345779999999999999999999986
No 204
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.6e-38 Score=356.61 Aligned_cols=199 Identities=28% Similarity=0.474 Sum_probs=175.2
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
.++|...+.||+|+||+||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 357888999999999999999975 689999999876533 334578999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhc-CCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHEL-ANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccc-
Confidence 999999999997643 589999999999999999999985 7 999999999999999999999999999765322
Q ss_pred CCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 002121 783 KGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKG 833 (964)
Q Consensus 783 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~ 833 (964)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 123456999999999999999999999999999999999999999753
No 205
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.8e-38 Score=356.30 Aligned_cols=259 Identities=24% Similarity=0.326 Sum_probs=193.4
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeC------
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQG------ 696 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------ 696 (964)
.++|...+.||+|+||.||+|... +|+.||||++..... .....+.+|+.++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999954 689999999875432 23456889999999999999999999997654
Q ss_pred ceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 697 EQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 697 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
..++||||+++ +|.+++.. .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 67999999975 78888863 4899999999999999999999988 9999999999999999999999999998
Q ss_pred eecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccc-----
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEH----- 851 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----- 851 (964)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+...+.......
T Consensus 176 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 176 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-CCCCCHHHHT
T ss_pred ccccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 65432 12334579999999999999999999999999999999999999997544322 2222222111000
Q ss_pred ------------------cccccccC----ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 852 ------------------YGLTEMMD----PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 852 ------------------~~~~~~~d----~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
....+.+. +............+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 00000000 0000011222456789999999999999999999986
No 206
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.3e-38 Score=370.59 Aligned_cols=251 Identities=24% Similarity=0.334 Sum_probs=204.5
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|...+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++|||||++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457888999999999999999965 78999999986543 23456789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE---CCCCcEEEeecccceee
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL---DENLTAKVADFGLSKLV 778 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DFGla~~~ 778 (964)
|||+.+|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 105 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp ECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 99999999999997654 6899999999999999999999988 9999999999999 56789999999999876
Q ss_pred cCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccccccc
Q 002121 779 SDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 779 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
.... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||.... ..+.+.......... -
T Consensus 180 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~-------~ 247 (484)
T 3nyv_A 180 EASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN-EYDILKKVEKGKYTF-------E 247 (484)
T ss_dssp CCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCCCC-------C
T ss_pred cccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHcCCCCC-------C
Confidence 5432 2344579999999999865 68999999999999999999999996533 222222222221110 0
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
.+.. ......+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 LPQW----KKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp SGGG----GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred Cccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0111 1112456689999999999999999999863
No 207
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.3e-38 Score=344.44 Aligned_cols=251 Identities=23% Similarity=0.383 Sum_probs=188.9
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcch--hHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQG--GLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
.++|+..+.||+|+||+||+|+. .+|+.||||+++...... ...+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46788999999999999999996 578999999997643322 223455566688889999999999999999999999
Q ss_pred EeccCCChhhhhcCC--CCCccchHHHHHHHHHHHHHHHHHhhc-CCCCeeccCCCCCcEEECCCCcEEEeecccceeec
Q 002121 703 EFMANGTLRESLSGR--SGIHLDWKRRLRIALGSARGLAYLHEL-ANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVS 779 (964)
Q Consensus 703 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 779 (964)
||++ |+|.+++... .+..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9998 5888777531 234699999999999999999999997 7 9999999999999999999999999998764
Q ss_pred CCCCCceeecccccCcccCcccc----ccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccc
Q 002121 780 DSSKGHVSTQVKGTMGYLDPEYY----MTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLT 855 (964)
Q Consensus 780 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (964)
... ......||+.|+|||++ ....++.++|||||||++|||++|+.||.........+..........
T Consensus 162 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----- 233 (290)
T 3fme_A 162 DDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ----- 233 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC-----
T ss_pred ccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCC-----
Confidence 432 22334699999999996 456789999999999999999999999975444444444333322210
Q ss_pred cccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 856 EMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 856 ~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
...... ...+.+++.+||+.||++|||+.|+++
T Consensus 234 -~~~~~~-------~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 -LPADKF-------SAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -CCTTTS-------CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -cccccC-------CHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 001111 145678999999999999999999987
No 208
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.6e-38 Score=350.88 Aligned_cols=249 Identities=25% Similarity=0.389 Sum_probs=195.7
Q ss_pred hhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc--------chhHHHHHHHHHHHhcCCCCccceeEEEEee
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM--------QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ 695 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 695 (964)
..++|...+.||+|+||.||+|... +|+.||||++..... .....+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3467899999999999999999964 689999999875321 1223588999999999999999999998655
Q ss_pred CceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc---EEEeec
Q 002121 696 GEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT---AKVADF 772 (964)
Q Consensus 696 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~DF 772 (964)
..++||||+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++. +||+||
T Consensus 88 -~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 88 -DYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp -SEEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred -ceEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccC
Confidence 4899999999999999987643 6899999999999999999999988 999999999999987664 999999
Q ss_pred ccceeecCCCCCceeecccccCcccCccccc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCch---hHHHHHHHhcc
Q 002121 773 GLSKLVSDSSKGHVSTQVKGTMGYLDPEYYM---TQQLTEKSDVYSFGVVMLELITAKQPIEKGKY---VVREVRTAMNR 846 (964)
Q Consensus 773 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~---~~~~~~~~~~~ 846 (964)
|+++..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||..... ....+.. .
T Consensus 162 g~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~---~ 235 (322)
T 2ycf_A 162 GHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS---G 235 (322)
T ss_dssp TTCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHH---T
T ss_pred ccceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHh---C
Confidence 999876432 2233456999999999974 56788999999999999999999999964322 1221111 1
Q ss_pred CcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 847 DDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 847 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.. ...+... ......+.+++.+||+.||++||++.|+++
T Consensus 236 ~~--------~~~~~~~---~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 KY--------NFIPEVW---AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CC--------CCCHHHH---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cc--------ccCchhh---hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00 0011111 111245679999999999999999999974
No 209
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=9e-38 Score=369.40 Aligned_cols=252 Identities=27% Similarity=0.338 Sum_probs=201.0
Q ss_pred hhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc-------------chhHHHHHHHHHHHhcCCCCccceeE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM-------------QGGLEFKTEIELLSRVHHKNLVGLVG 690 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~l~~ 690 (964)
..++|...+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4578999999999999999999964 688999999875432 22457889999999999999999999
Q ss_pred EEEeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC---cE
Q 002121 691 FCFEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL---TA 767 (964)
Q Consensus 691 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~---~~ 767 (964)
++.+.+..++|||||++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccE
Confidence 9999999999999999999999887543 5899999999999999999999988 99999999999998776 69
Q ss_pred EEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccC
Q 002121 768 KVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRD 847 (964)
Q Consensus 768 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 847 (964)
||+|||+++...... ......||+.|+|||++. +.++.++||||+||++|||++|+.||.... ..+.+.......
T Consensus 189 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~ 263 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN-DQDIIKKVEKGK 263 (504)
T ss_dssp EECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCC
T ss_pred EEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCC
Confidence 999999998765432 234457999999999986 568999999999999999999999996433 222222222211
Q ss_pred cccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 848 DEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 848 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
.. .+..... .....+.+++.+||+.||.+|||+.|+++.
T Consensus 264 ~~--------~~~~~~~---~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 264 YY--------FDFNDWK---NISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CC--------CCHHHHT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CC--------CCccccC---CCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 10 0101001 112456789999999999999999999863
No 210
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=4e-39 Score=366.74 Aligned_cols=241 Identities=15% Similarity=0.147 Sum_probs=189.1
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCC---CcchhHHHHHHH---HHHHhcCCCCcccee-------EE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQG---SMQGGLEFKTEI---ELLSRVHHKNLVGLV-------GF 691 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~H~nIv~l~-------~~ 691 (964)
.++|...+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788889999999999999995 57999999998743 233456789999 555566899999998 66
Q ss_pred EEeeC-----------------ceEEEEEeccCCChhhhhcCCC-----CCccchHHHHHHHHHHHHHHHHHhhcCCCCe
Q 002121 692 CFEQG-----------------EQMLVYEFMANGTLRESLSGRS-----GIHLDWKRRLRIALGSARGLAYLHELANPPI 749 (964)
Q Consensus 692 ~~~~~-----------------~~~lV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 749 (964)
+.+.+ ..++||||+ +|+|.+++.... ...++|..++.|+.||+.||+|||+.+ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 65543 278999999 689999997532 234567899999999999999999988 9
Q ss_pred eccCCCCCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccC-----------CCCCchhHHHHHH
Q 002121 750 IHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQ-----------QLTEKSDVYSFGV 818 (964)
Q Consensus 750 vH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDv~S~Gv 818 (964)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999986322 2344567 999999999877 8999999999999
Q ss_pred HHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 819 VMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 819 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
++|||++|+.||....... . ...... .. ......+.+++.+||+.||++||++.|+++
T Consensus 302 il~elltg~~Pf~~~~~~~---------~------~~~~~~-~~----~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALG---------G------SEWIFR-SC----KNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHHSSCCC------C---------C------SGGGGS-SC----CCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHHCCCCCccccccc---------c------hhhhhh-hc----cCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999995321100 0 000000 00 011145678999999999999999999985
No 211
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=7e-38 Score=368.72 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=201.1
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC--cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS--MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
.++|.+.+.||+|+||+||+|... +|+.||||++.... ......+.+|++++++++|||||++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 457899999999999999999964 78999999986432 233467899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEEC---CCCcEEEeecccceeec
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLD---ENLTAKVADFGLSKLVS 779 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~---~~~~~kl~DFGla~~~~ 779 (964)
||+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++ .++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 9999999999886543 6899999999999999999999988 99999999999995 56689999999998654
Q ss_pred CCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccC
Q 002121 780 DSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 780 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||.... ..+.+.......... -.
T Consensus 176 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~-------~~ 243 (486)
T 3mwu_A 176 QNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN-EYDILKRVETGKYAF-------DL 243 (486)
T ss_dssp CC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCS-------CS
T ss_pred CCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCCC-------CC
Confidence 332 2334579999999999875 58999999999999999999999996433 222222222211100 00
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
+.+. .....+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~----~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 244 PQWR----TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGGG----GSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cccC----CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111 112446689999999999999999999873
No 212
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.4e-38 Score=362.13 Aligned_cols=199 Identities=27% Similarity=0.395 Sum_probs=167.0
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEee-----Cc
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ-----GE 697 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 697 (964)
.++|...+.||+|+||.||+|+.. +|+.||||+++.... ...+++.+|+++|++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 568999999999999999999964 688999999976432 2345788999999999999999999999776 56
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
.|+||||++ |+|.+++... ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+|+.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 899999997 5999999764 36999999999999999999999988 99999999999999999999999999987
Q ss_pred ecCCCCC--------------------ceeecccccCcccCcccc-ccCCCCCchhHHHHHHHHHHHHhCCCCC
Q 002121 778 VSDSSKG--------------------HVSTQVKGTMGYLDPEYY-MTQQLTEKSDVYSFGVVMLELITAKQPI 830 (964)
Q Consensus 778 ~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDv~S~Gvvl~elltg~~p~ 830 (964)
....... ...+...||++|+|||++ ....++.++||||+||++|||++|..|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 6543211 123556799999999986 5567999999999999999999854443
No 213
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.4e-38 Score=343.27 Aligned_cols=256 Identities=22% Similarity=0.348 Sum_probs=200.5
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEe--eCceEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFE--QGEQML 700 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~l 700 (964)
.++|+..+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+ .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357888999999999999999964 789999999975433 334578999999999999999999998865 567899
Q ss_pred EEEeccCCChhhhhcCCC--CCccchHHHHHHHHHHHHHHHHHhhcC--CCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 701 VYEFMANGTLRESLSGRS--GIHLDWKRRLRIALGSARGLAYLHELA--NPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 999999999999987532 345899999999999999999999876 2459999999999999999999999999998
Q ss_pred eecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccccc
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTE 856 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (964)
...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... .+.......... .
T Consensus 165 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~i~~~~~------~- 234 (279)
T 2w5a_A 165 ILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-KELAGKIREGKF------R- 234 (279)
T ss_dssp HC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCC------C-
T ss_pred eecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-HHHHHHHhhccc------c-
Confidence 654321 122345689999999999988999999999999999999999999975432 111111111111 0
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 002121 857 MMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAI 898 (964)
Q Consensus 857 ~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 898 (964)
.+... ....+.+++.+||+.||++||++.|+++.+
T Consensus 235 ~~~~~-------~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 235 RIPYR-------YSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp CCCTT-------SCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred cCCcc-------cCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 01111 124567899999999999999999998643
No 214
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.4e-37 Score=350.56 Aligned_cols=265 Identities=22% Similarity=0.354 Sum_probs=200.7
Q ss_pred cCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCCCCccceeEEEEe--------e
Q 002121 627 NNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHHKNLVGLVGFCFE--------Q 695 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--------~ 695 (964)
++|...+.||+|+||+||+|+. .+|+.||||++...... ....+.+|++++++++||||+++++++.+ .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788999999999999999997 57899999998654332 24568899999999999999999999987 3
Q ss_pred CceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccc
Q 002121 696 GEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLS 775 (964)
Q Consensus 696 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla 775 (964)
+..++||||+++ +|.+.+.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred ceEEEEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 468999999985 7877776543 35899999999999999999999988 999999999999999999999999999
Q ss_pred eeecCCCC--CceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchh--HHHHHHHhccCccc
Q 002121 776 KLVSDSSK--GHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYV--VREVRTAMNRDDEE 850 (964)
Q Consensus 776 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~--~~~~~~~~~~~~~~ 850 (964)
+....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+..........
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 87653221 122344578999999999876 56899999999999999999999999754322 22222222211111
Q ss_pred ccc-c-----cc---ccC---ccchhhhH--HHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 851 HYG-L-----TE---MMD---PTIRNTVL--LGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 851 ~~~-~-----~~---~~d---~~l~~~~~--~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
... . .+ ... ..+..... .....+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 000 0 00 000 00000000 01234779999999999999999999986
No 215
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=7.5e-38 Score=348.67 Aligned_cols=266 Identities=24% Similarity=0.353 Sum_probs=203.4
Q ss_pred HhhcCCCccceeecCCcEEEEEEEe--cCCcEEEEEEecCCCc--chhHHHHHHHHHHHhc---CCCCccceeEEEE---
Q 002121 624 KCSNNFSESNEIGSGGYGKVYRGML--SDGQVVAIKRAQQGSM--QGGLEFKTEIELLSRV---HHKNLVGLVGFCF--- 693 (964)
Q Consensus 624 ~~~~~~~~~~~lG~G~fg~Vy~~~~--~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~--- 693 (964)
.+.++|...+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|+++++++ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3567899999999999999999997 4688999999864322 2234577888888777 8999999999997
Q ss_pred --eeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEee
Q 002121 694 --EQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVAD 771 (964)
Q Consensus 694 --~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 771 (964)
.....++||||++ |+|.+++.......+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEec
Confidence 4567899999998 69999998765556999999999999999999999988 99999999999999999999999
Q ss_pred cccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhH--HHHHHHhccCcc
Q 002121 772 FGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVV--REVRTAMNRDDE 849 (964)
Q Consensus 772 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~ 849 (964)
||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+.........
T Consensus 164 fg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 164 FGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240 (326)
T ss_dssp CCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred CcccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc
Confidence 9999865432 12234568999999999999999999999999999999999999997544322 112111111111
Q ss_pred cccc---------cccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 850 EHYG---------LTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 850 ~~~~---------~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..+. ........+..........+.+++.+||+.||++||++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 0000000111111112245678999999999999999999985
No 216
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.6e-38 Score=348.34 Aligned_cols=263 Identities=27% Similarity=0.378 Sum_probs=186.3
Q ss_pred hhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCC-cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGS-MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
..++|...+.||+|+||.||+|.. .+|+.||||++.... .....++.+|++++++++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 356899999999999999999995 478999999886543 233457889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcC------CCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 703 EFMANGTLRESLSG------RSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 703 E~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
||+++|+|.+++.. .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999863 12346899999999999999999999988 9999999999999999999999999997
Q ss_pred eecCCCC---CceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccc
Q 002121 777 LVSDSSK---GHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHY 852 (964)
Q Consensus 777 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 852 (964)
....... ........||+.|+|||++.. ..++.++||||||+++|||++|+.||............ ........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~- 247 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-LQNDPPSL- 247 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH-HTSSCCCT-
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH-hccCCCcc-
Confidence 6543221 112234569999999999875 56899999999999999999999999754332222211 11111000
Q ss_pred ccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 853 GLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 853 ~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.....++.... .....+.+++.+||+.||++||++.|+++
T Consensus 248 -~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 248 -ETGVQDKEMLK---KYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -TC-----CCCC---CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -ccccccchhhh---hhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00001111111 11245678999999999999999999985
No 217
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.2e-38 Score=349.74 Aligned_cols=262 Identities=20% Similarity=0.336 Sum_probs=202.3
Q ss_pred cccHHHHHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCc--chhHHHHHHHHHHHhcC--CCCccceeEE
Q 002121 616 WFSYDELKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVH--HKNLVGLVGF 691 (964)
Q Consensus 616 ~~~~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--H~nIv~l~~~ 691 (964)
.+.++.+....++|...+.||+|+||.||+|...+|+.||||++..... .....+.+|++++++++ |+||++++++
T Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~ 96 (313)
T 3cek_A 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 96 (313)
T ss_dssp ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence 3444455556678999999999999999999988899999999875433 33467899999999997 5999999999
Q ss_pred EEeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEee
Q 002121 692 CFEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVAD 771 (964)
Q Consensus 692 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 771 (964)
+.+.+..++||| +.+++|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+|||+++ +.+||+|
T Consensus 97 ~~~~~~~~lv~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~D 169 (313)
T 3cek_A 97 EITDQYIYMVME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLID 169 (313)
T ss_dssp EECSSEEEEEEC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECC
T ss_pred eecCCEEEEEEe-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEee
Confidence 999999999999 66889999997653 6899999999999999999999988 999999999999964 8999999
Q ss_pred cccceeecCCCCCceeecccccCcccCcccccc-----------CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHH
Q 002121 772 FGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMT-----------QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREV 840 (964)
Q Consensus 772 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~ 840 (964)
||+++...............||+.|+|||++.. ..++.++|||||||++|||++|+.||.........+
T Consensus 170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 249 (313)
T 3cek_A 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249 (313)
T ss_dssp CSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH
T ss_pred ccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH
Confidence 999987654333223344569999999999865 468889999999999999999999997654444444
Q ss_pred HHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 841 RTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
.......... ...... ...+.+++.+||+.||++||++.|+++.
T Consensus 250 ~~~~~~~~~~--~~~~~~-----------~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 250 HAIIDPNHEI--EFPDIP-----------EKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHHCTTSCC--CCCCCS-----------CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhccccc--CCcccc-----------hHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 3333222110 011111 1356689999999999999999999864
No 218
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.6e-38 Score=346.43 Aligned_cols=252 Identities=22% Similarity=0.378 Sum_probs=198.1
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEEe
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467889999999999999999975 5899999999876666667899999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCC
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKG 784 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 784 (964)
+++|+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 171 (302)
T 2j7t_A 98 CPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-- 171 (302)
T ss_dssp CTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH--
T ss_pred CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccc--
Confidence 99999999886532 35899999999999999999999988 9999999999999999999999999976432110
Q ss_pred ceeecccccCcccCccccc-----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccC
Q 002121 785 HVSTQVKGTMGYLDPEYYM-----TQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 785 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
.......||+.|+|||++. ...++.++||||||+++|||++|+.||...... ............ ....
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~------~~~~ 244 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKSDPP------TLLT 244 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCC------CCSS
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-HHHHHHhccCCc------ccCC
Confidence 1122346899999999983 567899999999999999999999999754322 222222211110 0000
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
+ ......+.+++.+||+.||++|||+.|+++
T Consensus 245 ~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 P------SKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp G------GGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred c------cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0 011245678999999999999999999874
No 219
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1e-37 Score=348.24 Aligned_cols=254 Identities=19% Similarity=0.296 Sum_probs=200.5
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcC-CCCccceeEEEEe--eCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVH-HKNLVGLVGFCFE--QGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~--~~~~~lV 701 (964)
.++|+..+.||+|+||+||+|+. .+|+.||||+++... ...+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 35788999999999999999985 578999999987432 457899999999997 9999999999987 5678999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC-cEEEeecccceeecC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL-TAKVADFGLSKLVSD 780 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-~~kl~DFGla~~~~~ 780 (964)
|||+++++|.+++. .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++....
T Consensus 112 ~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 99999999999985 3788999999999999999999988 99999999999999776 899999999987654
Q ss_pred CCCCceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccc---------
Q 002121 781 SSKGHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEE--------- 850 (964)
Q Consensus 781 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------- 850 (964)
... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||..+....+.+..........
T Consensus 184 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 184 GQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp TCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence 322 234568999999999876 6789999999999999999999999965544333322211100000
Q ss_pred ----------------ccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 851 ----------------HYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 851 ----------------~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.....+...... .......+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSEN---QHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTT---GGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccc---cccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000000 0112356779999999999999999999985
No 220
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=9e-38 Score=361.24 Aligned_cols=198 Identities=22% Similarity=0.264 Sum_probs=173.6
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhc------CCCCccceeEEEEeeCce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRV------HHKNLVGLVGFCFEQGEQ 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~nIv~l~~~~~~~~~~ 698 (964)
..+|.+.+.||+|+||+||+|... +++.||||+++... ....++.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457899999999999999999864 58999999997532 2335678899998887 467999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc--EEEeecccce
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT--AKVADFGLSK 776 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~--~kl~DFGla~ 776 (964)
++||||+. |+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 69999998766556999999999999999999999998 999999999999999987 9999999997
Q ss_pred eecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKG 833 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~ 833 (964)
..... .....||+.|+|||++.+..++.++|||||||++|||++|++||...
T Consensus 251 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 65432 22357899999999999999999999999999999999999999644
No 221
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=342.73 Aligned_cols=251 Identities=26% Similarity=0.412 Sum_probs=199.9
Q ss_pred hhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEEE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 703 (964)
..++|...+.||+|+||.||+|... +|+.||||++.... ...++.+|++++++++||||+++++++.+.+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3567899999999999999999975 58999999987643 33578999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCC
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSK 783 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~ 783 (964)
|+++|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 105 ~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 105 YCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp CCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 99999999998632 236899999999999999999999988 99999999999999999999999999987654321
Q ss_pred CceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccch
Q 002121 784 GHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIR 863 (964)
Q Consensus 784 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 863 (964)
......||+.|+|||++.+..++.++||||||+++|||++|+.||......... ........ .. ...+.
T Consensus 181 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~-~~-----~~~~~-- 249 (314)
T 3com_A 181 --KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-FMIPTNPP-PT-----FRKPE-- 249 (314)
T ss_dssp --CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSCC-CC-----CSSGG--
T ss_pred --ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHhcCCC-cc-----cCCcc--
Confidence 223456899999999999989999999999999999999999999754432221 11111111 00 00011
Q ss_pred hhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 864 NTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 864 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.....+.+++.+||+.||++||++.|+++
T Consensus 250 ----~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 250 ----LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ----GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11245678999999999999999999986
No 222
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-37 Score=355.37 Aligned_cols=263 Identities=22% Similarity=0.309 Sum_probs=195.4
Q ss_pred HHhhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEee------
Q 002121 623 KKCSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ------ 695 (964)
Q Consensus 623 ~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------ 695 (964)
....++|...+.||+|+||+||+|+. .+|+.||||++..... ...+|++++++++|||||++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 44567899999999999999999995 5799999999865432 234799999999999999999998543
Q ss_pred --------------------------------CceEEEEEeccCCChhhhhcC--CCCCccchHHHHHHHHHHHHHHHHH
Q 002121 696 --------------------------------GEQMLVYEFMANGTLRESLSG--RSGIHLDWKRRLRIALGSARGLAYL 741 (964)
Q Consensus 696 --------------------------------~~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yL 741 (964)
...++||||++ |+|.+.+.. ..+..+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 23789999998 588777653 1234699999999999999999999
Q ss_pred hhcCCCCeeccCCCCCcEEEC-CCCcEEEeecccceeecCCCCCceeecccccCcccCccccccC-CCCCchhHHHHHHH
Q 002121 742 HELANPPIIHRDVKSTNILLD-ENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVV 819 (964)
Q Consensus 742 H~~~~~~ivH~Dlk~~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~S~Gvv 819 (964)
|+.+ |+||||||+|||++ .++.+||+|||+|+....... .....||+.|+|||++.+. .++.++||||+||+
T Consensus 158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9988 99999999999997 689999999999987654322 2345689999999998764 58999999999999
Q ss_pred HHHHHhCCCCCCCCchhHHH--HHHHhccCccc----------ccccccccCccchhh-hHHHHHHHHHHHHHhhhcCCC
Q 002121 820 MLELITAKQPIEKGKYVVRE--VRTAMNRDDEE----------HYGLTEMMDPTIRNT-VLLGFRRYLELALQCVEESAT 886 (964)
Q Consensus 820 l~elltg~~p~~~~~~~~~~--~~~~~~~~~~~----------~~~~~~~~d~~l~~~-~~~~~~~l~~li~~cl~~dP~ 886 (964)
+|||++|+.||......... +.........+ ...........+... .......+.+++.+||+.||+
T Consensus 232 l~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 99999999999754332211 11111111000 000111111111110 111224577999999999999
Q ss_pred CCCCHHHHHH
Q 002121 887 DRPTMSEVVK 896 (964)
Q Consensus 887 ~RPs~~evl~ 896 (964)
+|||+.|+++
T Consensus 312 ~R~t~~e~l~ 321 (383)
T 3eb0_A 312 LRINPYEAMA 321 (383)
T ss_dssp GSCCHHHHHT
T ss_pred hCCCHHHHhc
Confidence 9999999984
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.9e-37 Score=340.80 Aligned_cols=252 Identities=25% Similarity=0.320 Sum_probs=203.2
Q ss_pred hhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc---------chhHHHHHHHHHHHhcC-CCCccceeEEEE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM---------QGGLEFKTEIELLSRVH-HKNLVGLVGFCF 693 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~ 693 (964)
..++|...+.||+|+||.||+|... +|+.||||+++.... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3568999999999999999999974 689999999875431 12346789999999996 999999999999
Q ss_pred eeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecc
Q 002121 694 EQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFG 773 (964)
Q Consensus 694 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFG 773 (964)
+.+..++||||+++|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEeccc
Confidence 999999999999999999999754 36899999999999999999999988 9999999999999999999999999
Q ss_pred cceeecCCCCCceeecccccCcccCccccc------cCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccC
Q 002121 774 LSKLVSDSSKGHVSTQVKGTMGYLDPEYYM------TQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRD 847 (964)
Q Consensus 774 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 847 (964)
+++...... ......||+.|+|||++. ...++.++||||||+++|||++|+.||..... ...........
T Consensus 170 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~ 245 (298)
T 1phk_A 170 FSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-MLMLRMIMSGN 245 (298)
T ss_dssp TCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTC
T ss_pred chhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-HHHHHHHhcCC
Confidence 998765432 223456899999999985 45688999999999999999999999965432 22222222211
Q ss_pred cccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 848 DEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 848 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.. . ..+.. ......+.+++.+||+.||++||++.|+++
T Consensus 246 ~~----~---~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 246 YQ----F---GSPEW----DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CC----C---CTTTG----GGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cc----c---Ccccc----cccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11 0 00110 111245679999999999999999999975
No 224
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4.5e-38 Score=344.47 Aligned_cols=259 Identities=23% Similarity=0.368 Sum_probs=197.0
Q ss_pred hcCCCccceeecCCcEEEEEEEec--CCc--EEEEEEecCCC---cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS--DGQ--VVAIKRAQQGS---MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQ 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~--~g~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 698 (964)
.++|+..+.||+|+||+||+|++. +++ .||||+++... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357888999999999999999853 333 68999887542 233467899999999999999999999998654 8
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccc
Confidence 89999999999999997542 35899999999999999999999988 999999999999999999999999999877
Q ss_pred cCCCCCc-eeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCccccccccc
Q 002121 779 SDSSKGH-VSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTE 856 (964)
Q Consensus 779 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (964)
....... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... .+.+......... ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~----~~- 245 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILHKIDKEGER----LP- 245 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHHTSCCC----CC-
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-HHHHHHHHccCCC----CC-
Confidence 5433211 2234457889999999998889999999999999999999 9999964332 2222222211110 00
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHH
Q 002121 857 MMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQ 903 (964)
Q Consensus 857 ~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 903 (964)
.... ....+.+++.+||+.||++||++.++++.|+++..
T Consensus 246 -~~~~-------~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 246 -RPED-------CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp -CCTT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred -CCcC-------cCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 0011 12456789999999999999999999999988754
No 225
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.4e-37 Score=342.10 Aligned_cols=252 Identities=25% Similarity=0.409 Sum_probs=192.9
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEe----------
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFE---------- 694 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~---------- 694 (964)
.++|+..+.||+|+||.||+|+. .+|+.||||++... ......+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 46788999999999999999996 47899999998642 2334578899999999999999999999865
Q ss_pred ---eCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEee
Q 002121 695 ---QGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVAD 771 (964)
Q Consensus 695 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 771 (964)
.+..++||||+++|+|.+++.... ..+++.+++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEee
Confidence 456799999999999999997543 46788999999999999999999988 99999999999999999999999
Q ss_pred cccceeecCCCC------------CceeecccccCcccCccccccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCchhHH
Q 002121 772 FGLSKLVSDSSK------------GHVSTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVVMLELITAKQPIEKGKYVVR 838 (964)
Q Consensus 772 FGla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~ 838 (964)
||+++....... ........||+.|+|||++.+. .++.++|||||||++|||++ ||..+.....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~ 236 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN 236 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence 999986542210 1122345689999999998754 78999999999999999998 5544333223
Q ss_pred HHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 839 EVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
........... . .+.+.. .....+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~----~----~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 237 ILKKLRSVSIE----F----PPDFDD---NKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHSTTCC----C----CTTCCT---TTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhccccccc----c----Cccccc---cchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 22222211110 1 111111 11244668999999999999999999985
No 226
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=8.9e-38 Score=380.14 Aligned_cols=249 Identities=20% Similarity=0.254 Sum_probs=204.7
Q ss_pred hhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC---cchhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQM 699 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 699 (964)
..++|...+.||+|+||+||+|+.. +|+.||||+++... ......+..|.+++..+ +||||+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3568999999999999999999964 68899999987532 22345678899999988 7999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeec
Q 002121 700 LVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVS 779 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~ 779 (964)
+||||+++|+|.+++...+ .+++.++..++.||+.||+|||+.+ ||||||||+||||+.++.+||+|||+|+...
T Consensus 419 lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999998643 5899999999999999999999988 9999999999999999999999999998643
Q ss_pred CCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccC
Q 002121 780 DSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMD 859 (964)
Q Consensus 780 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 859 (964)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+.+..++..... ....+
T Consensus 494 ~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~-~~~~~~~~i~~~~~~----~p~~~- 565 (674)
T 3pfq_A 494 WDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-DEDELFQSIMEHNVA----YPKSM- 565 (674)
T ss_dssp CTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHSSCCC----CCTTS-
T ss_pred cCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC-CHHHHHHHHHhCCCC----CCccC-
Confidence 322 2234567999999999999999999999999999999999999999653 333333333332221 11111
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCH-----HHHHH
Q 002121 860 PTIRNTVLLGFRRYLELALQCVEESATDRPTM-----SEVVK 896 (964)
Q Consensus 860 ~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 896 (964)
...+.+++.+||+.||++||++ +||++
T Consensus 566 ----------s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 566 ----------SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ----------CHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ----------CHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1346689999999999999997 56543
No 227
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.6e-38 Score=354.49 Aligned_cols=265 Identities=22% Similarity=0.332 Sum_probs=201.7
Q ss_pred hhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc-hhHHHHHHHHHHHhcCCCCccceeEEEEee-----Cc
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ-GGLEFKTEIELLSRVHHKNLVGLVGFCFEQ-----GE 697 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 697 (964)
..++|+..+.||+|+||.||+|... +++.||||++...... ....+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 4568999999999999999999964 6889999999754332 335788999999999999999999999765 36
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
.++||||++ |+|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 899999998 5999998754 4899999999999999999999988 99999999999999999999999999987
Q ss_pred ecCCCCC-ceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCch--hHHHHHHHhccCcccccc
Q 002121 778 VSDSSKG-HVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKY--VVREVRTAMNRDDEEHYG 853 (964)
Q Consensus 778 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~ 853 (964)
....... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ....+.............
T Consensus 178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257 (364)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHH
T ss_pred cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 6533211 11234579999999998764 4589999999999999999999999964332 222222222111110000
Q ss_pred -------------cccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 854 -------------LTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 854 -------------~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
....-...+..........+.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000001112245779999999999999999999985
No 228
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.3e-38 Score=354.91 Aligned_cols=258 Identities=24% Similarity=0.369 Sum_probs=183.4
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEee------C
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ------G 696 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~ 696 (964)
.++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+|++++++++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 47899999999999999999995 5789999999875432 2345788999999999999999999999754 5
Q ss_pred ceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 697 EQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 697 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
..++||||+ +++|.+++... .+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 679999999 68999988753 5999999999999999999999988 9999999999999999999999999998
Q ss_pred eecCCCCCceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHH---hccCccccc
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTA---MNRDDEEHY 852 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~---~~~~~~~~~ 852 (964)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .+.+... .........
T Consensus 181 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 181 HTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCHHHH
T ss_pred ccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHH
Confidence 65432 234579999999999876 6789999999999999999999999965433 2222222 111110000
Q ss_pred -------------ccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 853 -------------GLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 853 -------------~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.+...-...+..........+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00000000011111112245679999999999999999999985
No 229
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.1e-38 Score=358.63 Aligned_cols=252 Identities=11% Similarity=0.017 Sum_probs=180.4
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc---chhHHHHHHHHHHHhc--CCCCcccee-------EEEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM---QGGLEFKTEIELLSRV--HHKNLVGLV-------GFCF 693 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~H~nIv~l~-------~~~~ 693 (964)
.+|...+.||+|+||+||+|+.. +|+.||||++..... .....+++|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888899999999999999964 789999999987553 2234677886555555 699988755 4544
Q ss_pred ee-----------------CceEEEEEeccCCChhhhhcCCCCCccchHHH------HHHHHHHHHHHHHHhhcCCCCee
Q 002121 694 EQ-----------------GEQMLVYEFMANGTLRESLSGRSGIHLDWKRR------LRIALGSARGLAYLHELANPPII 750 (964)
Q Consensus 694 ~~-----------------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~iv 750 (964)
.. ...++|||||+ |+|.+++.... ..+.+..+ ..++.||++||+|||+.+ |+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---iv 216 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKG---LV 216 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---Cc
Confidence 33 23799999999 89999997642 23566666 788899999999999988 99
Q ss_pred ccCCCCCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCcccccc--CCCCCchhHHHHHHHHHHHHhCCC
Q 002121 751 HRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMT--QQLTEKSDVYSFGVVMLELITAKQ 828 (964)
Q Consensus 751 H~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~S~Gvvl~elltg~~ 828 (964)
||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999986532 1224567799999999987 679999999999999999999999
Q ss_pred CCCCCchhHHHHHHHhccCcccccccccccCccchhh-hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 829 PIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNT-VLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 829 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
||......... ..... ............. .......+.+++.+||+.||++|||+.|+++
T Consensus 292 Pf~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKG---SWKRP-----SLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTT---CCCBC-----CTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCccccc---chhhh-----hhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99643211000 00000 0000000000000 0112245678999999999999999999975
No 230
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.3e-37 Score=375.29 Aligned_cols=262 Identities=25% Similarity=0.393 Sum_probs=206.8
Q ss_pred HHhhcCCCccceeecCCcEEEEEEEec----CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCc
Q 002121 623 KKCSNNFSESNEIGSGGYGKVYRGMLS----DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE 697 (964)
Q Consensus 623 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 697 (964)
....++|...+.||+|+||+||+|.+. .+..||||+++.... ...+.+.+|+.++++++||||+++++++. .+.
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 344567888999999999999999964 246799999876433 33467899999999999999999999985 467
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
.++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred eEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCee
Confidence 899999999999999997543 46899999999999999999999988 99999999999999999999999999987
Q ss_pred ecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCccccccccc
Q 002121 778 VSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGLTE 856 (964)
Q Consensus 778 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (964)
...... .......+|+.|+|||++....++.++|||||||++|||++ |..||..... .+.+......... ..
T Consensus 541 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-~~~~~~i~~~~~~---~~-- 613 (656)
T 2j0j_A 541 MEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERL---PM-- 613 (656)
T ss_dssp CCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHHHHTCCC---CC--
T ss_pred cCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHcCCCC---CC--
Confidence 644322 22234457889999999998899999999999999999997 9999864332 2222222111110 01
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 857 MMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 857 ~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
.+.. ...+.+++.+||+.||++||++.|+++.|+.++++.
T Consensus 614 --~~~~-------~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 614 --PPNC-------PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp --CTTC-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --Cccc-------cHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 1111 145678999999999999999999999999988654
No 231
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=345.99 Aligned_cols=263 Identities=22% Similarity=0.321 Sum_probs=195.0
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEE-----------
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCF----------- 693 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~----------- 693 (964)
.++|...+.||+|+||.||+|... +|+.||||++........+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467889999999999999999975 58999999998766556678999999999999999999999873
Q ss_pred ---eeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEEC-CCCcEEE
Q 002121 694 ---EQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLD-ENLTAKV 769 (964)
Q Consensus 694 ---~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-~~~~~kl 769 (964)
+.+..++||||++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEE
Confidence 3467899999998 6999999753 5899999999999999999999988 99999999999997 5779999
Q ss_pred eecccceeecCCCC-CceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccC
Q 002121 770 ADFGLSKLVSDSSK-GHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRD 847 (964)
Q Consensus 770 ~DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 847 (964)
+|||+++....... ........+|..|+|||.+.. ..++.++|||||||++|||++|+.||...... +.+.......
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~~ 241 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQMQLILESI 241 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHS
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhc
Confidence 99999987643211 112234567999999998865 67899999999999999999999999754432 2222222111
Q ss_pred cccc----cccccccC-----------ccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 848 DEEH----YGLTEMMD-----------PTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 848 ~~~~----~~~~~~~d-----------~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.... ......+. ..+..........+.+++.+||+.||++||+++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 1000 00000000 0000001112356789999999999999999999986
No 232
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.6e-37 Score=343.83 Aligned_cols=261 Identities=20% Similarity=0.320 Sum_probs=203.3
Q ss_pred hcCCCccceeecCCcEEEEEEEe--cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCC------ccceeEEEEeeCc
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML--SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKN------LVGLVGFCFEQGE 697 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~~ 697 (964)
.++|.+.+.||+|+||+||+|.. .+|+.||||+++... .....+.+|++++++++|++ ++++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 45889999999999999999986 368899999987532 33457889999999997664 9999999999999
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC--------------
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE-------------- 763 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-------------- 763 (964)
.++||||+ +++|.+++.......+++.++..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999998766567899999999999999999999988 999999999999987
Q ss_pred -----CCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchh--
Q 002121 764 -----NLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYV-- 836 (964)
Q Consensus 764 -----~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~-- 836 (964)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 242 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred cccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 678999999999875432 23356899999999999999999999999999999999999999744321
Q ss_pred HHHHHHHhccCcccc--------c------cccc----------ccCc--cchhhhHHHHHHHHHHHHHhhhcCCCCCCC
Q 002121 837 VREVRTAMNRDDEEH--------Y------GLTE----------MMDP--TIRNTVLLGFRRYLELALQCVEESATDRPT 890 (964)
Q Consensus 837 ~~~~~~~~~~~~~~~--------~------~~~~----------~~d~--~l~~~~~~~~~~l~~li~~cl~~dP~~RPs 890 (964)
...+.......+... + .... ...+ ............+.+++.+||+.||++|||
T Consensus 243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 322 (339)
T 1z57_A 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT 322 (339)
T ss_dssp HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence 122222111111000 0 0000 0000 000001223466889999999999999999
Q ss_pred HHHHHH
Q 002121 891 MSEVVK 896 (964)
Q Consensus 891 ~~evl~ 896 (964)
+.|+++
T Consensus 323 ~~ell~ 328 (339)
T 1z57_A 323 LREALK 328 (339)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 999975
No 233
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.8e-37 Score=355.38 Aligned_cols=261 Identities=21% Similarity=0.220 Sum_probs=199.6
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcC--------CCCccceeEEEE---
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVH--------HKNLVGLVGFCF--- 693 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~l~~~~~--- 693 (964)
.++|.+.+.||+|+||+||+|+. .+|+.||||+++.. ......+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46899999999999999999985 46889999999743 233457889999999996 788999999998
Q ss_pred -eeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhc-CCCCeeccCCCCCcEEECCCC------
Q 002121 694 -EQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHEL-ANPPIIHRDVKSTNILLDENL------ 765 (964)
Q Consensus 694 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~------ 765 (964)
+....++||||+ +|+|.+++.......+++..+..++.||+.||+|||++ + |+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhh
Confidence 456789999999 56777766554445699999999999999999999997 7 99999999999999775
Q ss_pred -------------------------------------------cEEEeecccceeecCCCCCceeecccccCcccCcccc
Q 002121 766 -------------------------------------------TAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYY 802 (964)
Q Consensus 766 -------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 802 (964)
.+||+|||+++..... .....||+.|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 8999999999876432 2335689999999999
Q ss_pred ccCCCCCchhHHHHHHHHHHHHhCCCCCCCCch-----hH---HHHHHHhccCcccc----------c----ccccccC-
Q 002121 803 MTQQLTEKSDVYSFGVVMLELITAKQPIEKGKY-----VV---REVRTAMNRDDEEH----------Y----GLTEMMD- 859 (964)
Q Consensus 803 ~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~-----~~---~~~~~~~~~~~~~~----------~----~~~~~~d- 859 (964)
.+..++.++|||||||++|||++|+.||..... .. ..+.......+... + ......+
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 999999999999999999999999999963221 11 11111111111000 0 0000000
Q ss_pred --ccc-------hhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 860 --PTI-------RNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 860 --~~l-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..+ ..........+.+++.+||+.||++|||++|+++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 000 0012334467889999999999999999999985
No 234
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=357.49 Aligned_cols=323 Identities=20% Similarity=0.180 Sum_probs=274.1
Q ss_pred EEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCc
Q 002121 69 LGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNN 148 (964)
Q Consensus 69 L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 148 (964)
++.++++++ .+|..+. ++|+.|+|++| .+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 16 v~c~~~~l~-~ip~~~~--~~l~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 16 VLCHRKRFV-AVPEGIP--TETRLLDLGKN-RIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSS-CCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEECCCC-ccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 344444554 4555443 57899999999 7888888899999999999999999998888899999999999999999
Q ss_pred ccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcC
Q 002121 149 FSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQL 228 (964)
Q Consensus 149 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l 228 (964)
++...+..|.++++|++|+|++|++++..| ..+..+++|+.|++++|.++ .++...|..+++|++|++++|++
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~------~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l 164 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLD------YMFQDLYNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNL 164 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECT------TTTTTCTTCCEEEECCTTCC-EECTTSSTTCTTCCEEEEESCCC
T ss_pred CCccCcccccCCCCCCEEECCCCccccCCh------hHccccccCCEEECCCCccc-eeChhhccCCCCCCEEECCCCcC
Confidence 997666678899999999999999986555 45788899999999999998 55566788889999999999999
Q ss_pred cccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCCCCCCCCcc
Q 002121 229 SGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSFDPTEAPLW 307 (964)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~ 307 (964)
++..+..+..+++|+.|+|++|.+++..+..|..+++|++|+|++|.+.+..+ ......+|++|+|++|.++ ...+..
T Consensus 165 ~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~ 243 (477)
T 2id5_A 165 TSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLA 243 (477)
T ss_dssp SSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-SCCHHH
T ss_pred cccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-ccCHHH
Confidence 98777789999999999999999998888899999999999999987766444 4556669999999999996 555567
Q ss_pred cCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCC---Ccccc
Q 002121 308 FSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGS---GIKNY 384 (964)
Q Consensus 308 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~---~~~l~ 384 (964)
|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+|+.++... ...++
T Consensus 244 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 323 (477)
T 2id5_A 244 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLE 323 (477)
T ss_dssp HTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCC
T ss_pred hcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccC
Confidence 899999999999999999999999999999999999999999999999999999999999999999988653 34578
Q ss_pred eeEeecCC-cccccccccCc
Q 002121 385 TLILVGNP-VCTATLANTNY 403 (964)
Q Consensus 385 ~l~l~~Np-~c~~~l~~~~~ 403 (964)
.|+|.+|| .|+|.+.+...
T Consensus 324 ~L~l~~N~l~c~c~~~~~~~ 343 (477)
T 2id5_A 324 TLILDSNPLACDCRLLWVFR 343 (477)
T ss_dssp EEECCSSCEECSGGGHHHHT
T ss_pred EEEccCCCccCccchHhHHh
Confidence 89999999 89999865433
No 235
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.4e-37 Score=349.04 Aligned_cols=257 Identities=22% Similarity=0.361 Sum_probs=196.8
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCCCCccceeEEEEeeCce----
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQ---- 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---- 698 (964)
.++|...+.||+|+||+||+|... +|+.||||++...... ....+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 568999999999999999999964 6899999999764332 245788999999999999999999999877654
Q ss_pred --EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 699 --MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 699 --~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
++||||++ |+|.+++.. .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999998 689888743 4899999999999999999999988 9999999999999999999999999998
Q ss_pred eecCCCCCceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhc---cCccccc
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMN---RDDEEHY 852 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~ 852 (964)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +.+..... .......
T Consensus 193 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 193 HADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHH
T ss_pred ccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCcHHHH
Confidence 65432 234568999999999887 68899999999999999999999999754322 22222211 1110000
Q ss_pred -c------------cccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 853 -G------------LTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 853 -~------------~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
. ........+..........+.+++.+||+.||++|||+.|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0 0000000011111112356789999999999999999999985
No 236
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4e-37 Score=354.95 Aligned_cols=258 Identities=24% Similarity=0.346 Sum_probs=192.3
Q ss_pred cCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeC------ceE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQG------EQM 699 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~ 699 (964)
.+|...+.||+|+||.||+|+.. +|+.||||++.... ..+.+|+++|++++|||||++++++...+ ..+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 36888899999999999999975 68999999986532 22357999999999999999999986532 367
Q ss_pred EEEEeccCCChhhhhcC--CCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCC-CcEEEeecccce
Q 002121 700 LVYEFMANGTLRESLSG--RSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDEN-LTAKVADFGLSK 776 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-~~~kl~DFGla~ 776 (964)
+||||+++ +|.+.+.. .....+++..+..++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999986 66665542 12346999999999999999999999988 9999999999999965 678999999998
Q ss_pred eecCCCCCceeecccccCcccCccccccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhc---cCcc---
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMN---RDDE--- 849 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~--- 849 (964)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... +.+...+. ....
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 7654322 2345789999999998764 7899999999999999999999999754322 22222111 1100
Q ss_pred -------cccccccccCccchhh-hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 850 -------EHYGLTEMMDPTIRNT-VLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 850 -------~~~~~~~~~d~~l~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..+.........+... .......+.+++.+||+.||++||++.|+++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0000111100001000 0111246779999999999999999999985
No 237
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=348.22 Aligned_cols=264 Identities=23% Similarity=0.355 Sum_probs=201.5
Q ss_pred HHHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCc--chhHHHHHHHHHHHhcCCCCccceeEEEEeeCce
Q 002121 621 ELKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSM--QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQ 698 (964)
Q Consensus 621 el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 698 (964)
++....++|...+.||+|+||.||+|.... .||+|+++.... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 104 (319)
T 2y4i_B 27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHL 104 (319)
T ss_dssp GSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCE
T ss_pred cccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCce
Confidence 344446788999999999999999999853 499999875432 2334678999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+||+++ ++.+||+|||+++..
T Consensus 105 ~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 105 AIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp EEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred EEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 99999999999999997643 46899999999999999999999988 99999999999998 679999999998765
Q ss_pred cCCC---CCceeecccccCcccCcccccc---------CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhcc
Q 002121 779 SDSS---KGHVSTQVKGTMGYLDPEYYMT---------QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNR 846 (964)
Q Consensus 779 ~~~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 846 (964)
.... .........||+.|+|||++.. ..++.++||||||+++|||++|+.||...... .........
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~ 258 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-AIIWQMGTG 258 (319)
T ss_dssp --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-HHHHHHHTT
T ss_pred ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhccC
Confidence 3211 1112233468999999999864 45788999999999999999999999754322 112221111
Q ss_pred CcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 847 DDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 847 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
.. ......... ..+.+++.+||+.||++||++.|+++.|+.+.++.
T Consensus 259 ~~------~~~~~~~~~-------~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 259 MK------PNLSQIGMG-------KEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CC------CCCCCSSCC-------TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CC------CCCCcCCCC-------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 11 000111111 23568999999999999999999999999876554
No 238
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.3e-37 Score=352.73 Aligned_cols=259 Identities=23% Similarity=0.332 Sum_probs=193.2
Q ss_pred cCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCc------eEE
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE------QML 700 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------~~l 700 (964)
.+|...+.||+|+||+||+|+...+..||+|++..... ...+|++++++++||||+++++++...+. .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 46888999999999999999987777799998764322 22479999999999999999999977654 789
Q ss_pred EEEeccCCChhhhhcC-CCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEEC-CCCcEEEeecccceee
Q 002121 701 VYEFMANGTLRESLSG-RSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLD-ENLTAKVADFGLSKLV 778 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-~~~~~kl~DFGla~~~ 778 (964)
||||++++.+....+. .....+++..+..++.|+++||+|||+.+ |+||||||+|||++ .++.+||+|||+|+..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 9999987544433321 11346899999999999999999999988 99999999999999 8999999999999876
Q ss_pred cCCCCCceeecccccCcccCccccccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhc---cCccc----
Q 002121 779 SDSSKGHVSTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMN---RDDEE---- 850 (964)
Q Consensus 779 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~---- 850 (964)
..... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...... +.+...+. .....
T Consensus 193 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 193 IAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHH
T ss_pred cCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHh
Confidence 44322 2345689999999998764 5899999999999999999999999754322 22211111 11000
Q ss_pred ------ccccccccCccchhh-hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 851 ------HYGLTEMMDPTIRNT-VLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 851 ------~~~~~~~~d~~l~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
...........+... .......+.+++.+||+.||++|||+.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 000111000011100 0112246789999999999999999999985
No 239
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.6e-36 Score=370.98 Aligned_cols=366 Identities=19% Similarity=0.183 Sum_probs=282.1
Q ss_pred CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccC-----cCCc----ccC
Q 002121 64 SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTG-----NIPD----EIG 134 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~-----~~p~----~~~ 134 (964)
.+++.|+|++|.+++..+..++.+++|++|+|++| .+.+..|..|..+++|++|+|++|...+ .+|. .|.
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~ 326 (680)
T 1ziw_A 248 TNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYN-NIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQ 326 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSC-CBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTT
T ss_pred CCCCEEECCCCCcCccCcccccCcccccEeeCCCC-ccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcc
Confidence 35888888888888777777888888888888888 6777777777777777777777665443 2332 677
Q ss_pred CCCCccEEEcccCcccCcCCCcCCCccccccccccccccccc-cCcc---------------------cCCCCccccccC
Q 002121 135 NLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGS-IPVS---------------------TITSPGLDQLKN 192 (964)
Q Consensus 135 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~-iP~~---------------------~~~~~~l~~l~~ 192 (964)
.+++|++|+|++|++++..+..|.++++|++|+|++|.+++. +|.. .+....+..+++
T Consensus 327 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~ 406 (680)
T 1ziw_A 327 WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGH 406 (680)
T ss_dssp TCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTT
T ss_pred cCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCC
Confidence 788888888888888887777788888888887777654321 1100 011245677889
Q ss_pred CCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCc--cccCccccCCCCCCeee
Q 002121 193 AKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALT--GKVPTNLNNLTNVNELN 270 (964)
Q Consensus 193 L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~ 270 (964)
|+.|++++|++++.+|...|..+.+|++|++++|++++..+..|..+++|+.|++++|.++ +.+|..|.++++|+.|+
T Consensus 407 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~ 486 (680)
T 1ziw_A 407 LEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILD 486 (680)
T ss_dssp CCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEE
T ss_pred CCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEE
Confidence 9999999999988888888889999999999999999888889999999999999999987 67899999999999999
Q ss_pred ccCccCccCCCC-CCCCCCCCEEEccCCCCCCC-------CCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEE
Q 002121 271 LAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPT-------EAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVK 342 (964)
Q Consensus 271 Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~-------~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 342 (964)
|++|+|+++++. +.++++|++|+|++|++++. .....|.++++|+.|+|++|+++...+..|.++++|+.|+
T Consensus 487 Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 566 (680)
T 1ziw_A 487 LSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIID 566 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeE
Confidence 999999998886 89999999999999999732 1223488999999999999999977667899999999999
Q ss_pred cCCcccccccCCCCccCCCCcEEeccCCcceeeccC----CCcccceeEeecCC-cccccc-cccCccccCCCCCccccc
Q 002121 343 LRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLG----SGIKNYTLILVGNP-VCTATL-ANTNYCQLQQPTTKAYST 416 (964)
Q Consensus 343 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~----~~~~l~~l~l~~Np-~c~~~l-~~~~~~~~~~~~~~~~~~ 416 (964)
|++|++++.++..|..+++|+.|+|++|+|+.++.. ....+..|+|.+|| .|+|.. .+...|............
T Consensus 567 Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~~~~~~~~~~~~ 646 (680)
T 1ziw_A 567 LGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELS 646 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEECCSSCC--------
T ss_pred CCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHHHHHHhcCccccccc
Confidence 999999999999999999999999999999999865 34568899999999 899996 888888433222222223
Q ss_pred ccccCCCCCCCCCC
Q 002121 417 SLANCGGKSCPPEQ 430 (964)
Q Consensus 417 ~~~~c~~~~~~~~~ 430 (964)
....|..|+-..++
T Consensus 647 ~~~~C~~p~~~~g~ 660 (680)
T 1ziw_A 647 SHYLCNTPPHYHGF 660 (680)
T ss_dssp --------------
T ss_pred CCcEECCchHHCCC
Confidence 45678888655555
No 240
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.6e-37 Score=348.24 Aligned_cols=269 Identities=22% Similarity=0.279 Sum_probs=190.3
Q ss_pred HHHHHhhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEeeCc-
Q 002121 620 DELKKCSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE- 697 (964)
Q Consensus 620 ~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~- 697 (964)
.+.....++|.+.+.||+|+||+||+|+.. +|+.||||++..... ....+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455667789999999999999999999974 689999998865432 23456788899999999999999999987554
Q ss_pred ------eEEEEEeccCCChhhhhcC--CCCCccchHHHHHHHHHHHHHHHHHh--hcCCCCeeccCCCCCcEEECC-CCc
Q 002121 698 ------QMLVYEFMANGTLRESLSG--RSGIHLDWKRRLRIALGSARGLAYLH--ELANPPIIHRDVKSTNILLDE-NLT 766 (964)
Q Consensus 698 ------~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivH~Dlk~~NILl~~-~~~ 766 (964)
.++||||+++ +|.+.+.. .....+++..+..++.|++.||+||| +.+ |+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCc
Confidence 7899999986 55443331 12346889999999999999999999 777 999999999999996 899
Q ss_pred EEEeecccceeecCCCCCceeecccccCcccCccccccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCchhH--HHHHHH
Q 002121 767 AKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQ-QLTEKSDVYSFGVVMLELITAKQPIEKGKYVV--REVRTA 843 (964)
Q Consensus 767 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~--~~~~~~ 843 (964)
+||+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ..+...
T Consensus 171 ~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 247 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247 (360)
T ss_dssp EEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence 99999999987654322 2345689999999998654 48999999999999999999999997543221 111111
Q ss_pred hccCcccc----------cccccccCccch----hhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 844 MNRDDEEH----------YGLTEMMDPTIR----NTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 844 ~~~~~~~~----------~~~~~~~d~~l~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
........ ..........+. .........+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11111000 000000000000 001113456789999999999999999999985
No 241
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.1e-37 Score=346.85 Aligned_cols=263 Identities=22% Similarity=0.337 Sum_probs=199.4
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEee-----Cce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQ-----GEQ 698 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~ 698 (964)
.++|...+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468899999999999999999965 689999999975433 2345688999999999999999999998764 678
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 90 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999997 5999998753 5899999999999999999999988 999999999999999999999999999876
Q ss_pred cCCCCCc--------eeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHH--HHHHhccC
Q 002121 779 SDSSKGH--------VSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVRE--VRTAMNRD 847 (964)
Q Consensus 779 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~--~~~~~~~~ 847 (964)
....... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||......... +.......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence 5322111 1223468999999998764 67899999999999999999999999754432111 11111111
Q ss_pred cccccccccc---------------cCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 848 DEEHYGLTEM---------------MDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 848 ~~~~~~~~~~---------------~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
... ...... ....+..........+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 243 HSD-NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CST-TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred chh-ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 100 000000 000011111122345779999999999999999999986
No 242
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=6.6e-37 Score=342.67 Aligned_cols=251 Identities=20% Similarity=0.283 Sum_probs=173.6
Q ss_pred hcCCCccc-eeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEe----eCceE
Q 002121 626 SNNFSESN-EIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFE----QGEQM 699 (964)
Q Consensus 626 ~~~~~~~~-~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~ 699 (964)
.++|.+.+ .||+|+||+||+|... +|+.||||++.... ....+....++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 56788854 6999999999999975 68999999986531 122233344666799999999999987 45589
Q ss_pred EEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC---CCcEEEeecccce
Q 002121 700 LVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE---NLTAKVADFGLSK 776 (964)
Q Consensus 700 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DFGla~ 776 (964)
+||||+++|+|.+++.......+++.+++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998776567999999999999999999999988 999999999999976 4559999999998
Q ss_pred eecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhH--HHHHHHhccCccccccc
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVV--REVRTAMNRDDEEHYGL 854 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~ 854 (964)
...... .....||+.|+|||++....++.++|||||||++|||++|+.||....... ......+.... ...
T Consensus 180 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~ 252 (336)
T 3fhr_A 180 ETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ---YGF 252 (336)
T ss_dssp EC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------CC
T ss_pred eccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccc---ccc
Confidence 754322 234568999999999988889999999999999999999999996432111 00010000000 000
Q ss_pred ccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 002121 855 TEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKA 897 (964)
Q Consensus 855 ~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 897 (964)
. .+. .......+.+++.+||+.||++|||+.|+++.
T Consensus 253 ~---~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 253 P---NPE----WSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp C---TTT----STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred C---chh----hccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 000 01112456789999999999999999999873
No 243
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.9e-37 Score=334.15 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=201.0
Q ss_pred hhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCC--cchhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 625 CSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGS--MQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 625 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
..++|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4568999999999999999999975 78999999986533 23456789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCC---CcEEEeecccceee
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDEN---LTAKVADFGLSKLV 778 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~---~~~kl~DFGla~~~ 778 (964)
|||+++++|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||+++.+ +.+||+|||+++..
T Consensus 100 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 99999999999886543 5899999999999999999999988 9999999999999754 47999999999865
Q ss_pred cCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccccccc
Q 002121 779 SDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMM 858 (964)
Q Consensus 779 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (964)
..... .....||+.|+|||++.+ .++.++||||||+++|||++|+.||..... .+........... .
T Consensus 175 ~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~--------~ 241 (287)
T 2wei_A 175 QQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-YDILKRVETGKYA--------F 241 (287)
T ss_dssp CCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCCC--------C
T ss_pred cCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCCC--------C
Confidence 43321 233458999999998865 589999999999999999999999965332 2222222211110 0
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 859 DPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 859 d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 DLPQW---RTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CSGGG---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Cchhh---hhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00000 011245678999999999999999999987
No 244
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.1e-37 Score=351.64 Aligned_cols=263 Identities=21% Similarity=0.331 Sum_probs=182.2
Q ss_pred CCCc-cceeecCCcEEEEEEEec---CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCccceeEEEEe--eCceEEE
Q 002121 628 NFSE-SNEIGSGGYGKVYRGMLS---DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFE--QGEQMLV 701 (964)
Q Consensus 628 ~~~~-~~~lG~G~fg~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lV 701 (964)
.|.. .++||+|+||+||+|+.. +++.||||++..... ...+.+|+++|++++|||||++++++.. ....++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3444 457999999999999965 578999999975433 2468899999999999999999999965 5678999
Q ss_pred EEeccCCChhhhhcCC-------CCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE----CCCCcEEEe
Q 002121 702 YEFMANGTLRESLSGR-------SGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL----DENLTAKVA 770 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl----~~~~~~kl~ 770 (964)
|||+++ +|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 999974 888877522 1235899999999999999999999988 9999999999999 778999999
Q ss_pred ecccceeecCCCC-CceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCch-----------hH
Q 002121 771 DFGLSKLVSDSSK-GHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKY-----------VV 837 (964)
Q Consensus 771 DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~-----------~~ 837 (964)
|||+|+....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ..
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l 254 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence 9999987653221 122344679999999999987 4589999999999999999999999963321 11
Q ss_pred HHHHHHhccCcccccccccccCc-----------cchhh-hH--------HHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 838 REVRTAMNRDDEEHYGLTEMMDP-----------TIRNT-VL--------LGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~d~-----------~l~~~-~~--------~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
..+...+.............+.. ..... .. .....+.+++.+||+.||++|||++|+++
T Consensus 255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 22222222111110000000000 00000 00 00235678999999999999999999986
No 245
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.5e-37 Score=347.87 Aligned_cols=261 Identities=19% Similarity=0.249 Sum_probs=199.5
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHHHhcC-----------CCCccceeEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVH-----------HKNLVGLVGFCF 693 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~~~~~ 693 (964)
.++|...+.||+|+||+||+|+. .+|+.||||++.... .....+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35788999999999999999996 578999999987432 33456889999999886 899999999998
Q ss_pred eeC----ceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhc-CCCCeeccCCCCCcEEEC------
Q 002121 694 EQG----EQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHEL-ANPPIIHRDVKSTNILLD------ 762 (964)
Q Consensus 694 ~~~----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~------ 762 (964)
..+ ..++||||+ +++|.+++.......+++..+..++.||+.||+|||+. + |+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCc
Confidence 765 789999999 88999999876555699999999999999999999997 7 99999999999994
Q ss_pred CCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCch-------
Q 002121 763 ENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKY------- 835 (964)
Q Consensus 763 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~------- 835 (964)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4558999999999876432 2334689999999999999999999999999999999999999973321
Q ss_pred -hHHHHHHHhccCcccc-------------ccccccc-Ccc---c-------hhhhHHHHHHHHHHHHHhhhcCCCCCCC
Q 002121 836 -VVREVRTAMNRDDEEH-------------YGLTEMM-DPT---I-------RNTVLLGFRRYLELALQCVEESATDRPT 890 (964)
Q Consensus 836 -~~~~~~~~~~~~~~~~-------------~~~~~~~-d~~---l-------~~~~~~~~~~l~~li~~cl~~dP~~RPs 890 (964)
....+.......+... ......+ ... + ..........+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 1111111111111000 0000000 000 0 0012344567889999999999999999
Q ss_pred HHHHHH
Q 002121 891 MSEVVK 896 (964)
Q Consensus 891 ~~evl~ 896 (964)
++|+++
T Consensus 328 ~~ell~ 333 (373)
T 1q8y_A 328 AGGLVN 333 (373)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999986
No 246
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.4e-37 Score=342.80 Aligned_cols=254 Identities=25% Similarity=0.402 Sum_probs=177.1
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCc-chhHHHHHHHH-HHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM-QGGLEFKTEIE-LLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
.++|...+.||+|+||.||+|... +|+.||||+++.... ....++..|+. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367888899999999999999974 789999999976533 23345556665 777789999999999999999999999
Q ss_pred EeccCCChhhhhcC---CCCCccchHHHHHHHHHHHHHHHHHhhc-CCCCeeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 703 EFMANGTLRESLSG---RSGIHLDWKRRLRIALGSARGLAYLHEL-ANPPIIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 703 E~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
||+++ +|.+++.. .....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99985 88777652 1234689999999999999999999997 7 999999999999999999999999999876
Q ss_pred cCCCCCceeecccccCcccCcccc----ccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccc
Q 002121 779 SDSSKGHVSTQVKGTMGYLDPEYY----MTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGL 854 (964)
Q Consensus 779 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (964)
.... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.......+.+........
T Consensus 177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~------ 247 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDP------ 247 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCC------
T ss_pred cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCC------
Confidence 4332 22334699999999998 4567899999999999999999999999753322222111111100
Q ss_pred ccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 855 TEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 855 ~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
. .+.... .......+.+++.+||+.||++||++.|+++
T Consensus 248 ~-~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 P-QLSNSE---EREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp C-CCCCCS---SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C-CCCCcc---cccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0 000000 0011245779999999999999999999975
No 247
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2e-36 Score=345.09 Aligned_cols=203 Identities=23% Similarity=0.295 Sum_probs=173.1
Q ss_pred HhhcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcC-CC-----CccceeEEEEeeC
Q 002121 624 KCSNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVH-HK-----NLVGLVGFCFEQG 696 (964)
Q Consensus 624 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----nIv~l~~~~~~~~ 696 (964)
...++|...+.||+|+||+||+|+.. +|+.||||+++... ....++..|+++++.++ |+ +|+++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 34678999999999999999999964 68899999997432 23456788999999885 55 4999999999999
Q ss_pred ceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEEC--CCCcEEEeeccc
Q 002121 697 EQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLD--ENLTAKVADFGL 774 (964)
Q Consensus 697 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~--~~~~~kl~DFGl 774 (964)
..++||||++ |+|.+++.......+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999996 5999999876545699999999999999999999953 13499999999999994 578899999999
Q ss_pred ceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc
Q 002121 775 SKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGK 834 (964)
Q Consensus 775 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~ 834 (964)
++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 208 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 208 SCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9876432 234568999999999999999999999999999999999999997543
No 248
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.9e-36 Score=367.00 Aligned_cols=362 Identities=22% Similarity=0.198 Sum_probs=282.3
Q ss_pred CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEE
Q 002121 64 SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLA 143 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 143 (964)
..++.|||++|+|++..+.+|.++++|++|||++| .+.+..+..|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N-~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRC-EIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTC-CCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCC-cCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 36899999999999888889999999999999999 79888888999999999999999999977777899999999999
Q ss_pred cccCcccCcCCCcCCCcccccccccccccccc-ccCcccCCCCccccccCCCeeEccCCcccccccccc-----------
Q 002121 144 LNSNNFSGRIPPSLGKLSQLYWLDLADNQLTG-SIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQL----------- 211 (964)
Q Consensus 144 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~----------- 211 (964)
|++|+|++..+..|+++++|++|+|++|++++ .+| ..+..+++|++|+|++|++++..+..+
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~------~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~ 204 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLP------EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 204 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCC------GGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCC
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCc------hhhccchhhhhhcccCccccccccccccchhhhhhhhh
Confidence 99999998777889999999999999999974 234 457788999999999998864322211
Q ss_pred ----------------c---------------------------------------------------------------
Q 002121 212 ----------------F--------------------------------------------------------------- 212 (964)
Q Consensus 212 ----------------f--------------------------------------------------------------- 212 (964)
+
T Consensus 205 ~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 284 (635)
T 4g8a_A 205 SLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 284 (635)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEE
T ss_pred hhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhh
Confidence 0
Q ss_pred ----------------------------------------CCCcceeEEEccCCcCcccCCcc-----------------
Q 002121 213 ----------------------------------------SPDMVLIHVLFDGNQLSGNIPES----------------- 235 (964)
Q Consensus 213 ----------------------------------------~~~~~L~~L~l~~N~l~~~~p~~----------------- 235 (964)
.....|+.|++.+|++.+..+..
T Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~ 364 (635)
T 4g8a_A 285 EFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNA 364 (635)
T ss_dssp EEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCB
T ss_pred hhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCC
Confidence 00011223333333332211111
Q ss_pred --cCCCCCCcEEEcccCcCcc-------------------------------------------------c-cCccccCC
Q 002121 236 --LGYVQTLEVLRLDRNALTG-------------------------------------------------K-VPTNLNNL 263 (964)
Q Consensus 236 --~~~l~~L~~L~Ls~N~l~~-------------------------------------------------~-~p~~~~~l 263 (964)
...+++|+.|++++|.+.. . .+..|.++
T Consensus 365 ~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l 444 (635)
T 4g8a_A 365 FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL 444 (635)
T ss_dssp CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTC
T ss_pred cccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccc
Confidence 1234556666666665531 1 11234555
Q ss_pred CCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEE
Q 002121 264 TNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVK 342 (964)
Q Consensus 264 ~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 342 (964)
++|+.++++.|.+.+..+. +..+++|+.|+|++|.+.....|..|..+++|++|+|++|+|++..|..|.++++|++|+
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 6666666677777766654 677888999999998865466788899999999999999999999999999999999999
Q ss_pred cCCcccccccCCCCccCCCCcEEeccCCcceeeccCCC----cccceeEeecCC-cccccccccCccccCCCCCcccccc
Q 002121 343 LRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSG----IKNYTLILVGNP-VCTATLANTNYCQLQQPTTKAYSTS 417 (964)
Q Consensus 343 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~----~~l~~l~l~~Np-~c~~~l~~~~~~~~~~~~~~~~~~~ 417 (964)
|++|+|++..+..|..+++|+.|+|++|+|+.+++..+ ..++.|+|.+|| .|||.+.++..|...... .+....
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl~~~~~-~~~~~~ 603 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQ-LLVEVE 603 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHHHHTTT-TBSCGG
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHHHhCCC-ccCCCC
Confidence 99999999999999999999999999999999987643 347889999999 899999999999543333 233345
Q ss_pred cccCCCCCCCCCCCCC
Q 002121 418 LANCGGKSCPPEQKLS 433 (964)
Q Consensus 418 ~~~c~~~~~~~~~~~~ 433 (964)
...|.+|+-..|+...
T Consensus 604 ~~~C~~P~~~~g~~l~ 619 (635)
T 4g8a_A 604 RMECATPSDKQGMPVL 619 (635)
T ss_dssp GCBBCSSTTTTTCBGG
T ss_pred CceeCCchHHCCCEee
Confidence 6789999888877443
No 249
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=342.10 Aligned_cols=257 Identities=22% Similarity=0.361 Sum_probs=195.9
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc--hhHHHHHHHHHHHhcCCCCccceeEEEEeeCc-----
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ--GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE----- 697 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----- 697 (964)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467888999999999999999964 6899999999764332 24568899999999999999999999987654
Q ss_pred -eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 698 -QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 698 -~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
.++||||++ |+|.+++.. .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 174 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 174 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred eEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeeccccc
Confidence 499999998 589888753 4899999999999999999999988 9999999999999999999999999998
Q ss_pred eecCCCCCceeecccccCcccCcccccc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhc---cCccccc
Q 002121 777 LVSDSSKGHVSTQVKGTMGYLDPEYYMT-QQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMN---RDDEEHY 852 (964)
Q Consensus 777 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~ 852 (964)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +.+..... .......
T Consensus 175 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 175 HADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFV 248 (353)
T ss_dssp C-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHHCBCCHHHH
T ss_pred CCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 65422 234568999999999876 67899999999999999999999999754422 22222111 1100000
Q ss_pred -------------ccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 853 -------------GLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 853 -------------~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.+.....+.+..........+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000111111122356779999999999999999999975
No 250
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=336.29 Aligned_cols=251 Identities=22% Similarity=0.357 Sum_probs=182.1
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcch--hHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQG--GLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
.++|...+.||+|+||.||+|... +|+.||||++....... ...+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888999999999999999975 78999999997654322 223455566788889999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhc-CCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHEL-ANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
||+ ++.+..+.... ...+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++.....
T Consensus 104 e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 44555554322 34689999999999999999999985 7 999999999999999999999999999765433
Q ss_pred CCCceeecccccCcccCccccc-----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccccccccc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYM-----TQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTE 856 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (964)
. ......||+.|+|||++. ...++.++|||||||++|||++|+.||.......+.+.......... ...
T Consensus 179 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~ 252 (318)
T 2dyl_A 179 K---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL---LPG 252 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC---CCS
T ss_pred c---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC---CCc
Confidence 2 223456999999999984 45788999999999999999999999976444444444333322210 000
Q ss_pred ccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 857 MMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 857 ~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
...+ ...+.+++.+||+.||.+||++.|+++
T Consensus 253 --~~~~-------~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 253 --HMGF-------SGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp --SSCC-------CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --cCCC-------CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0011 144668999999999999999999975
No 251
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-37 Score=339.22 Aligned_cols=245 Identities=23% Similarity=0.397 Sum_probs=191.4
Q ss_pred HHHHhhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcc------hhHHHHHHHHHHHhc----CCCCcccee
Q 002121 621 ELKKCSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQ------GGLEFKTEIELLSRV----HHKNLVGLV 689 (964)
Q Consensus 621 el~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~H~nIv~l~ 689 (964)
+.....++|...+.||+|+||.||+|.. .+|+.||||+++..... ....+.+|+.++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3345567899999999999999999985 57899999998754332 223466899999999 899999999
Q ss_pred EEEEeeCceEEEEEe-ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEEC-CCCcE
Q 002121 690 GFCFEQGEQMLVYEF-MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLD-ENLTA 767 (964)
Q Consensus 690 ~~~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-~~~~~ 767 (964)
+++.+.+..++|||| +.+++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++ +++.+
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeE
Confidence 999999999999999 78999999997643 5899999999999999999999998 99999999999999 89999
Q ss_pred EEeecccceeecCCCCCceeecccccCcccCccccccCCCC-CchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhcc
Q 002121 768 KVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLT-EKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNR 846 (964)
Q Consensus 768 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 846 (964)
||+|||+++...... .....||..|+|||++.+..+. .++||||||+++|||++|+.||...... ...
T Consensus 180 kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~ 248 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI-------LEA 248 (312)
T ss_dssp EECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-------HHT
T ss_pred EEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH-------hhh
Confidence 999999998765432 2345699999999998876664 5899999999999999999999653211 111
Q ss_pred CcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 847 DDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 847 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.. .... .+ ...+.+++.+||+.||++||++.|+++
T Consensus 249 ~~----~~~~----~~-------~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 249 EL----HFPA----HV-------SPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp CC----CCCT----TS-------CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred cc----CCcc----cC-------CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 10 0111 11 134668999999999999999999986
No 252
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.9e-37 Score=343.21 Aligned_cols=246 Identities=24% Similarity=0.420 Sum_probs=199.4
Q ss_pred HHHHHhhcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcc------hhHHHHHHHHHHHhcC--CCCccceeE
Q 002121 620 DELKKCSNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQ------GGLEFKTEIELLSRVH--HKNLVGLVG 690 (964)
Q Consensus 620 ~el~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~nIv~l~~ 690 (964)
.+.....++|...+.||+|+||.||+|+. .+|+.||||+++..... ....+.+|+.++++++ |+||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 34455567899999999999999999985 57899999998754322 2245778999999996 599999999
Q ss_pred EEEeeCceEEEEEeccC-CChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEEC-CCCcEE
Q 002121 691 FCFEQGEQMLVYEFMAN-GTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLD-ENLTAK 768 (964)
Q Consensus 691 ~~~~~~~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-~~~~~k 768 (964)
++.+.+..++||||+.+ ++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++ +++.+|
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~k 190 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELK 190 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEE
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEE
Confidence 99999999999999986 89999987643 6899999999999999999999988 99999999999999 789999
Q ss_pred EeecccceeecCCCCCceeecccccCcccCccccccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccC
Q 002121 769 VADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQL-TEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRD 847 (964)
Q Consensus 769 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 847 (964)
|+|||+++...... .....||+.|+|||++....+ +.++|||||||++|||++|+.||...... ....
T Consensus 191 L~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-------~~~~ 259 (320)
T 3a99_A 191 LIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-------IRGQ 259 (320)
T ss_dssp ECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-------HHCC
T ss_pred EeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh-------hccc
Confidence 99999998765432 234569999999999987665 68899999999999999999999653211 1111
Q ss_pred cccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 848 DEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 848 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
. .....+. ..+.+++.+||+.||++||++.|+++
T Consensus 260 ~--------~~~~~~~-------~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 V--------FFRQRVS-------SECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp C--------CCSSCCC-------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c--------cccccCC-------HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0111111 35668999999999999999999975
No 253
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.2e-36 Score=352.48 Aligned_cols=251 Identities=24% Similarity=0.282 Sum_probs=185.6
Q ss_pred CCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEEEEEecc
Q 002121 628 NFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQMLVYEFMA 706 (964)
Q Consensus 628 ~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E~~~ 706 (964)
.|...+.||+|+||+||.+...+|+.||||++... ....+.+|+++++++ +|||||++++++.+.+..++|||||+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 34456889999999998776668999999998643 234678999999987 89999999999999999999999996
Q ss_pred CCChhhhhcCCCCCc-----cchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCC-------------CcEE
Q 002121 707 NGTLRESLSGRSGIH-----LDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDEN-------------LTAK 768 (964)
Q Consensus 707 ~gsL~~~l~~~~~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-------------~~~k 768 (964)
|+|.+++....... .++..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 69999998654211 234456889999999999999988 9999999999999654 4899
Q ss_pred EeecccceeecCCCCC--ceeecccccCcccCcccccc-------CCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHH
Q 002121 769 VADFGLSKLVSDSSKG--HVSTQVKGTMGYLDPEYYMT-------QQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVR 838 (964)
Q Consensus 769 l~DFGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~ 838 (964)
|+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||........
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~ 248 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH
Confidence 9999999987543221 11234579999999999865 678999999999999999999 9999964332221
Q ss_pred HHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 839 EVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.+.. .... .... +.+ ........+.+++.+||+.||++||++.|+++
T Consensus 249 ~i~~---~~~~----~~~~--~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 NIIR---GIFS----LDEM--KCL--HDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHH---TCCC----CCCC--TTC--CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhc---CCCC----cccc--ccc--ccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111 1110 1000 000 01223356779999999999999999999975
No 254
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.7e-36 Score=340.06 Aligned_cols=261 Identities=20% Similarity=0.270 Sum_probs=200.9
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CC-cEEEEEEecCCCcchhHHHHHHHHHHHhcCCCC------ccceeEEEEeeCc
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DG-QVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKN------LVGLVGFCFEQGE 697 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~~ 697 (964)
.++|.+.+.||+|+||+||+|... ++ +.||||+++.. ......+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999964 34 78999999753 233457889999999998766 8999999999999
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEE----------------
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILL---------------- 761 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---------------- 761 (964)
.++||||+ +|+|.+++.......+++.++..++.||+.||+|||+.+ |+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 667777776655457999999999999999999999988 9999999999999
Q ss_pred ---CCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchh--
Q 002121 762 ---DENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYV-- 836 (964)
Q Consensus 762 ---~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~-- 836 (964)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH 247 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 56889999999999875432 23356999999999999999999999999999999999999999754322
Q ss_pred HHHHHHHhccCcccc--------c--ccccccCcc----------------chhhhHHHHHHHHHHHHHhhhcCCCCCCC
Q 002121 837 VREVRTAMNRDDEEH--------Y--GLTEMMDPT----------------IRNTVLLGFRRYLELALQCVEESATDRPT 890 (964)
Q Consensus 837 ~~~~~~~~~~~~~~~--------~--~~~~~~d~~----------------l~~~~~~~~~~l~~li~~cl~~dP~~RPs 890 (964)
...+.......+... + ......+.. ...........+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 327 (355)
T 2eu9_A 248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT 327 (355)
T ss_dssp HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence 122222221111000 0 000000000 00001122346789999999999999999
Q ss_pred HHHHHH
Q 002121 891 MSEVVK 896 (964)
Q Consensus 891 ~~evl~ 896 (964)
+.|+++
T Consensus 328 ~~e~l~ 333 (355)
T 2eu9_A 328 LAEALL 333 (355)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 999974
No 255
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-36 Score=353.13 Aligned_cols=334 Identities=16% Similarity=0.148 Sum_probs=298.3
Q ss_pred CCccEEecC-----------CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccc
Q 002121 55 SWEGVTCNN-----------SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGC 123 (964)
Q Consensus 55 ~w~gv~C~~-----------~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n 123 (964)
.|..|.|.. ..++.|+|++|++++..+..|.++++|++|+|++| .+.+..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNEN-IVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTS-CCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCC-ccCEeChhhhhCCccCCEEECCCC
Confidence 578899974 36889999999999988999999999999999999 799999999999999999999999
Q ss_pred cccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcc
Q 002121 124 GFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKL 203 (964)
Q Consensus 124 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l 203 (964)
++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..| ..+..+++|+.|+|++|++
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L~l~~n~l 164 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH------RAFSGLNSLEQLTLEKCNL 164 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECT------TSSTTCTTCCEEEEESCCC
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeCh------hhccCCCCCCEEECCCCcC
Confidence 9996666778999999999999999999999999999999999999999995555 4688899999999999999
Q ss_pred cccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCC-C
Q 002121 204 SGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-D 282 (964)
Q Consensus 204 ~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~ 282 (964)
+ .++...|..+++|+.|++++|++++..+..|..+++|+.|++++|.+.+.+|..+....+|++|+|++|+|++.++ .
T Consensus 165 ~-~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 243 (477)
T 2id5_A 165 T-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLA 243 (477)
T ss_dssp S-SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHH
T ss_pred c-ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHH
Confidence 8 7888889999999999999999999999999999999999999999988888888888899999999999998775 4
Q ss_pred CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCC
Q 002121 283 LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLL 362 (964)
Q Consensus 283 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 362 (964)
+..+++|++|+|++|+++ ...+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|
T Consensus 244 ~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 322 (477)
T 2id5_A 244 VRHLVYLRFLNLSYNPIS-TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNL 322 (477)
T ss_dssp HTTCTTCCEEECCSSCCC-EECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGC
T ss_pred hcCccccCeeECCCCcCC-ccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCccc
Confidence 889999999999999998 6777789999999999999999999999999999999999999999999999999999999
Q ss_pred cEEeccCCcceeeccCCCc--ccceeEeecCC-ccccc
Q 002121 363 QLVDLQNNQISAITLGSGI--KNYTLILVGNP-VCTAT 397 (964)
Q Consensus 363 ~~L~L~~N~l~~i~~~~~~--~l~~l~l~~Np-~c~~~ 397 (964)
+.|+|++|+|++-....+. ....+.+.+|. .|.+.
T Consensus 323 ~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 323 ETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp CEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred CEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 9999999999974322111 12234455555 55543
No 256
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=350.55 Aligned_cols=250 Identities=25% Similarity=0.351 Sum_probs=187.8
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEEEEEe
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E~ 704 (964)
..+|...+.||+|+||+||.....+|+.||||++...... .+.+|+++++++ +|||||++++++.+.+..++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 4568888999999999966555567999999998754332 467899999999 799999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC-----CCcEEEeecccceeec
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE-----NLTAKVADFGLSKLVS 779 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-----~~~~kl~DFGla~~~~ 779 (964)
|+ |+|.+++.... ....+.+++.++.||++||+|||+.+ |+||||||+|||++. ...+||+|||+|+...
T Consensus 100 ~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 100 CA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 97 59999998654 34556677899999999999999988 999999999999943 3468899999998765
Q ss_pred CCCC-CceeecccccCcccCccccc---cCCCCCchhHHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHhccCccccccc
Q 002121 780 DSSK-GHVSTQVKGTMGYLDPEYYM---TQQLTEKSDVYSFGVVMLELIT-AKQPIEKGKYVVREVRTAMNRDDEEHYGL 854 (964)
Q Consensus 780 ~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~S~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (964)
.... ........||+.|+|||++. ...++.++|||||||++|||++ |..||..... ........... .
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~--~~~~~~~~~~~-----~ 247 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ--RQANILLGACS-----L 247 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT--HHHHHHTTCCC-----C
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH--HHHHHHhccCC-----c
Confidence 3321 12234567999999999997 4567889999999999999999 8888854322 11111111111 0
Q ss_pred ccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 855 TEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 855 ~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
....+ .......+.+++.+||+.||++||++.||++
T Consensus 248 -~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 248 -DCLHP-----EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -TTSCT-----TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -cccCc-----cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 01111 1112234668999999999999999999973
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.5e-36 Score=363.85 Aligned_cols=318 Identities=20% Similarity=0.258 Sum_probs=287.3
Q ss_pred cCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCC-CCC-CCCCCCCCc------ccchhhccccccccCcCCc--
Q 002121 62 NNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGG-LTG-SLSPRIGDL------QKLNILILAGCGFTGNIPD-- 131 (964)
Q Consensus 62 ~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~-l~~-~~p~~l~~l------~~L~~L~L~~n~l~~~~p~-- 131 (964)
...+++.|+|++|.+.|.+|..|+++++|++|+|++| . +.| .+|..++++ ++|++|+|++|+++ .+|.
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n-~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~ 324 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN-RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVET 324 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC-TTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHH
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC-CCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchh
Confidence 3468999999999999999999999999999999999 6 888 899999887 99999999999999 8999
Q ss_pred ccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccC-CCeeEccCCccccccccc
Q 002121 132 EIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKN-AKHFHFNKNKLSGTISEQ 210 (964)
Q Consensus 132 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~-L~~L~L~~N~l~g~l~~~ 210 (964)
.|+++++|++|+|++|+++|.+| .|.++++|++|+|++|+++ .+| ..+..+++ |++|++++|+++ .+|..
T Consensus 325 ~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp------~~l~~l~~~L~~L~Ls~N~l~-~lp~~ 395 (636)
T 4eco_A 325 SLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIP------ANFCGFTEQVENLSFAHNKLK-YIPNI 395 (636)
T ss_dssp HHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECC------TTSEEECTTCCEEECCSSCCS-SCCSC
T ss_pred hhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-ccc------HhhhhhcccCcEEEccCCcCc-ccchh
Confidence 99999999999999999999999 9999999999999999999 788 45889999 999999999999 88875
Q ss_pred ccCC-CcceeEEEccCCcCcccCCcccC-------CCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC
Q 002121 211 LFSP-DMVLIHVLFDGNQLSGNIPESLG-------YVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD 282 (964)
Q Consensus 211 ~f~~-~~~L~~L~l~~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 282 (964)
+... +.+|+.|++++|++++.+|..+. .+++|+.|+|++|++++..+..+..+++|++|+|++|+|+.+++.
T Consensus 396 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~ 475 (636)
T 4eco_A 396 FDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKN 475 (636)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSS
T ss_pred hhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHH
Confidence 4332 34899999999999999999998 888999999999999955445567799999999999999976665
Q ss_pred CCC--------CCCCCEEEccCCCCCCCCCCcccC--CCCCCcEEECCCCccccccChhccCCCCCCEEEc------CCc
Q 002121 283 LSQ--------MNSLSYVDLSNNSFDPTEAPLWFS--TLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKL------RNN 346 (964)
Q Consensus 283 l~~--------l~~L~~L~Ls~N~l~~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------~~N 346 (964)
... +++|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| ++|
T Consensus 476 ~~~~~~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N 552 (636)
T 4eco_A 476 SLKDENENFKNTYLLTSIDLRFNKLT--KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGN 552 (636)
T ss_dssp SSEETTEECTTGGGCCEEECCSSCCC--BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCC
T ss_pred HhccccccccccCCccEEECcCCcCC--ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccC
Confidence 322 239999999999996 5666676 99999999999999998 8999999999999999 568
Q ss_pred ccccccCCCCccCCCCcEEeccCCcceeeccCCCcccceeEeecCCc
Q 002121 347 AFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIKNYTLILVGNPV 393 (964)
Q Consensus 347 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~l~l~~Np~ 393 (964)
++.+.+|..+..+++|+.|+|++|+++.+|......++.|+|++||+
T Consensus 553 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ip~~~~~~L~~L~Ls~N~l 599 (636)
T 4eco_A 553 RTLREWPEGITLCPSLTQLQIGSNDIRKVNEKITPNISVLDIKDNPN 599 (636)
T ss_dssp BCCCCCCTTGGGCSSCCEEECCSSCCCBCCSCCCTTCCEEECCSCTT
T ss_pred cccccChHHHhcCCCCCEEECCCCcCCccCHhHhCcCCEEECcCCCC
Confidence 89999999999999999999999999999987667799999999995
No 258
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.3e-36 Score=359.42 Aligned_cols=357 Identities=18% Similarity=0.208 Sum_probs=229.5
Q ss_pred CCCccEEecC-------------CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhcc
Q 002121 54 GSWEGVTCNN-------------SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILIL 120 (964)
Q Consensus 54 ~~w~gv~C~~-------------~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L 120 (964)
|.|.|+ |+. .+++.|+|++|++++..|..|..+++|++|+|++| .+.+..|..|+++++|++|+|
T Consensus 4 C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n-~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 4 CDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSS-RINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp ECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTS-CCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCC-CcCccChhhccccccCCEEEC
Confidence 389998 863 37999999999999988899999999999999999 788888889999999999999
Q ss_pred ccccccCcCCcccCCCCCccEEEcccCcccC-cCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEcc
Q 002121 121 AGCGFTGNIPDEIGNLAELSFLALNSNNFSG-RIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFN 199 (964)
Q Consensus 121 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~ 199 (964)
++|.+++..|..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|++.+.+|.. .+..+++|++|+++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~-----~~~~l~~L~~L~L~ 156 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRI-----DFAGLTSLNELEIK 156 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTT-----TTTTCCEEEEEEEE
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHh-----hhhcccccCeeecc
Confidence 9999997777779999999999999999986 34667777777777777777754455421 22333333333333
Q ss_pred CCcccccccccc-----------------------cCCCcceeEEEccCCcCcc--------------------------
Q 002121 200 KNKLSGTISEQL-----------------------FSPDMVLIHVLFDGNQLSG-------------------------- 230 (964)
Q Consensus 200 ~N~l~g~l~~~~-----------------------f~~~~~L~~L~l~~N~l~~-------------------------- 230 (964)
+|++++.+|..+ +..+++|++|++++|++++
T Consensus 157 ~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 236 (549)
T 2z81_A 157 ALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLT 236 (549)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEE
T ss_pred CCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccc
Confidence 333332222111 0112222222222222222
Q ss_pred --------------------------------------------------------------------------------
Q 002121 231 -------------------------------------------------------------------------------- 230 (964)
Q Consensus 231 -------------------------------------------------------------------------------- 230 (964)
T Consensus 237 ~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~ 316 (549)
T 2z81_A 237 DESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRIT 316 (549)
T ss_dssp HHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEE
T ss_pred hhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEE
Confidence
Q ss_pred -------cCCccc-CCCCCCcEEEcccCcCccccCc---cccCCCCCCeeeccCccCccCCC---CCCCCCCCCEEEccC
Q 002121 231 -------NIPESL-GYVQTLEVLRLDRNALTGKVPT---NLNNLTNVNELNLAHNDLKGPFP---DLSQMNSLSYVDLSN 296 (964)
Q Consensus 231 -------~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~~---~l~~l~~L~~L~Ls~ 296 (964)
.+|..+ ..+++|++|+|++|++++.+|. .+..+++|++|+|++|++++.++ .+..+++|++|+|++
T Consensus 317 l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~ 396 (549)
T 2z81_A 317 VENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISR 396 (549)
T ss_dssp EESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTT
T ss_pred eccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCC
Confidence 122222 2355566666666666554432 24555555555555555554432 144555555555555
Q ss_pred CCCCCCCCCcccCCCCCCcEEECCCCccccccCh-----------------hccCCCCCCEEEcCCcccccccCCCCccC
Q 002121 297 NSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPD-----------------KLFSYSQIQQVKLRNNAFNNTLDMGNAVG 359 (964)
Q Consensus 297 N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-----------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 359 (964)
|+++ .+|..+..+++|++|+|++|++++.... .+..+++|++|+|++|+++.+ |. ...+
T Consensus 397 N~l~--~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~~i-p~-~~~l 472 (549)
T 2z81_A 397 NTFH--PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTL-PD-ASLF 472 (549)
T ss_dssp CCCC--CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSSC-CC-GGGC
T ss_pred CCCc--cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccCcC-CC-cccC
Confidence 5553 3444445555555555555554421110 123788999999999999854 43 4678
Q ss_pred CCCcEEeccCCcceeeccC---CCcccceeEeecCC-ccccc-ccccCccccCCCCCcccccccccCCCC
Q 002121 360 PLLQLVDLQNNQISAITLG---SGIKNYTLILVGNP-VCTAT-LANTNYCQLQQPTTKAYSTSLANCGGK 424 (964)
Q Consensus 360 ~~L~~L~L~~N~l~~i~~~---~~~~l~~l~l~~Np-~c~~~-l~~~~~~~~~~~~~~~~~~~~~~c~~~ 424 (964)
++|+.|+|++|+++.++.. ....++.|+|.+|| .|+|. +.....|..++... ......|.+|
T Consensus 473 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~l~~~l~~~~~~---~~~~~~C~~~ 539 (549)
T 2z81_A 473 PVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQK---EQGSAKCSGS 539 (549)
T ss_dssp TTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHHHHHHHHHHHCTTT---EESCCBBTTT
T ss_pred ccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccHHHHHHHHHhcccc---cCCCCeECCC
Confidence 9999999999999998765 34557889999999 89998 56666674332221 2345567665
No 259
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.1e-36 Score=362.03 Aligned_cols=332 Identities=19% Similarity=0.174 Sum_probs=222.6
Q ss_pred ccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCcccccccccc
Q 002121 90 LRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLA 169 (964)
Q Consensus 90 L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 169 (964)
|+.|+|++| .+.+..+..|+.+++|++|+|++|.++ .+|..+..+++|++|+|++|.+++..|..+.++++|++|+++
T Consensus 256 L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 256 VESINLQKH-YFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEECTTC-CCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred eeEEEeecC-ccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 333344443 333333444555555555555555555 455555555555555555555555545555555555555555
Q ss_pred ccccccccCcccCCCCccccccCCCeeEccCCccccccc-ccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcc
Q 002121 170 DNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTIS-EQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLD 248 (964)
Q Consensus 170 ~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~-~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 248 (964)
+|.+.+.+|. ..+..+++|++|++++|++++... ...+..+++|++|++++|++++..|..|..+++|+.|+++
T Consensus 334 ~n~~~~~~~~-----~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 408 (606)
T 3t6q_A 334 GNTKRLELGT-----GCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLA 408 (606)
T ss_dssp SCSSCCBCCS-----STTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECT
T ss_pred CCCcccccch-----hhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECC
Confidence 5555544442 235566677777777777663321 3345666777777777777777777777777777777777
Q ss_pred cCcCccccCc-cccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCCCC--CCCcccCCCCCCcEEECCCCcc
Q 002121 249 RNALTGKVPT-NLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPT--EAPLWFSTLPSLTTLICEFGSL 324 (964)
Q Consensus 249 ~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~--~~~~~~~~l~~L~~L~Ls~N~l 324 (964)
+|++++..+. .|.++++|++|+|++|.+++.++. +..+++|++|++++|++++. ..+..+..+++|+.|+|++|++
T Consensus 409 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l 488 (606)
T 3t6q_A 409 FTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDL 488 (606)
T ss_dssp TCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCC
T ss_pred CCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCcc
Confidence 7777765544 377777777777777777776654 67778888888888887632 2335677888888888888888
Q ss_pred ccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCC---CcccceeEeecCC-cccccccc
Q 002121 325 QGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGS---GIKNYTLILVGNP-VCTATLAN 400 (964)
Q Consensus 325 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~---~~~l~~l~l~~Np-~c~~~l~~ 400 (964)
++..|..|..+++|+.|+|++|++++..+..+..++.| .|+|++|+++.++... ...++.|++.+|| .|+|...+
T Consensus 489 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~ 567 (606)
T 3t6q_A 489 SSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIY 567 (606)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHH
T ss_pred CccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHH
Confidence 88888888888888888888888888888888888888 8888888888876543 3457889999999 89999988
Q ss_pred cCccccCCCCCcccccccccCCCCCCCCCC
Q 002121 401 TNYCQLQQPTTKAYSTSLANCGGKSCPPEQ 430 (964)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 430 (964)
...|..++.. .+.......|..|+...++
T Consensus 568 ~~~w~~~~~~-~~~~~~~~~C~~p~~~~g~ 596 (606)
T 3t6q_A 568 FLEWYKENMQ-KLEDTEDTLCENPPLLRGV 596 (606)
T ss_dssp HHHHHHHCGG-GEECGGGCBEEESGGGTTC
T ss_pred HHHHHHhCcc-cccCCCCCeeCCchHhCCC
Confidence 8888543322 2334455667776544444
No 260
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.1e-35 Score=352.93 Aligned_cols=326 Identities=22% Similarity=0.191 Sum_probs=270.4
Q ss_pred CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEE
Q 002121 64 SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLA 143 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 143 (964)
.+++.|+|++|.+++..+..|..+++|++|+|++| .+.+..|..|.++++|++|+|++|.|+ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHN-RIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSC-CCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCC-CCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 57899999999999888889999999999999999 799888999999999999999999999 67776 899999999
Q ss_pred cccCcccC-cCCCcCCCccccccccccccccccccCcccCCCCccccccCC--CeeEccCCcc--cccccccccC-----
Q 002121 144 LNSNNFSG-RIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNA--KHFHFNKNKL--SGTISEQLFS----- 213 (964)
Q Consensus 144 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L--~~L~L~~N~l--~g~l~~~~f~----- 213 (964)
|++|++++ .+|..|+++++|++|+|++|++++ ..+..+++| +.|++++|++ ++..|..+..
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---------~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~ 198 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---------LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTV 198 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---------TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEE
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCcccc---------CchhhhhhceeeEEEeecccccccccCcccccccCcce
Confidence 99999996 346899999999999999999873 123344444 7777777766 4333322211
Q ss_pred --------------------C-------------------------------------------------------Ccce
Q 002121 214 --------------------P-------------------------------------------------------DMVL 218 (964)
Q Consensus 214 --------------------~-------------------------------------------------------~~~L 218 (964)
. ..+|
T Consensus 199 l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L 278 (562)
T 3a79_B 199 LHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPV 278 (562)
T ss_dssp EEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSE
T ss_pred EEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccc
Confidence 0 1156
Q ss_pred eEEEccCCcCcccCCccc-----------------------------------------------------CCCCCCcEE
Q 002121 219 IHVLFDGNQLSGNIPESL-----------------------------------------------------GYVQTLEVL 245 (964)
Q Consensus 219 ~~L~l~~N~l~~~~p~~~-----------------------------------------------------~~l~~L~~L 245 (964)
++|++++|+++|.+|..+ ..+++|++|
T Consensus 279 ~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L 358 (562)
T 3a79_B 279 EYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFL 358 (562)
T ss_dssp EEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEE
T ss_pred cEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEE
Confidence 677777777777666654 678899999
Q ss_pred EcccCcCccccCccccCCCCCCeeeccCccCccCCC---CCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCC
Q 002121 246 RLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP---DLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFG 322 (964)
Q Consensus 246 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N 322 (964)
++++|.+++.+|..|.++++|++|+|++|++++..+ .+..+++|++|++++|++++...+..+..+++|+.|+|++|
T Consensus 359 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n 438 (562)
T 3a79_B 359 NFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSN 438 (562)
T ss_dssp ECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSS
T ss_pred ECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCC
Confidence 999999999899999999999999999999998653 48999999999999999984466667999999999999999
Q ss_pred ccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccC---CCcccceeEeecCC-cccccc
Q 002121 323 SLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLG---SGIKNYTLILVGNP-VCTATL 398 (964)
Q Consensus 323 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~---~~~~l~~l~l~~Np-~c~~~l 398 (964)
++++..|..+. ++|+.|+|++|+++. +|..+..+++|+.|+|++|+|+.++.. ....++.|+|.+|| .|+|.+
T Consensus 439 ~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 439 MLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp CCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CCCcchhhhhc--CcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 99988877664 799999999999995 455555999999999999999999865 44557889999999 899998
Q ss_pred ccc-Cccc
Q 002121 399 ANT-NYCQ 405 (964)
Q Consensus 399 ~~~-~~~~ 405 (964)
... ..|.
T Consensus 516 ~~~~~~~~ 523 (562)
T 3a79_B 516 IRYLSEWI 523 (562)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 876 4463
No 261
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=357.86 Aligned_cols=350 Identities=23% Similarity=0.214 Sum_probs=246.9
Q ss_pred CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEE
Q 002121 64 SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLA 143 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 143 (964)
.+++.|+|++|.+++..|..|..+++|++|+|++| .+.+..|..|+++++|++|+|++|+|+ .+|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHN-RIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSS-CCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCC-ccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 45666666666666655556666666666666666 566665666666666666666666666 45544 566666666
Q ss_pred cccCcccC-cCCCcCCCccccccccccccccc-------------------------cccCcccCCCC------------
Q 002121 144 LNSNNFSG-RIPPSLGKLSQLYWLDLADNQLT-------------------------GSIPVSTITSP------------ 185 (964)
Q Consensus 144 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~-------------------------g~iP~~~~~~~------------ 185 (964)
|++|++++ .+|..|+++++|++|+|++|+++ +.+|..+....
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~ 176 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNK 176 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSS
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCc
Confidence 66666665 34566666666666666666554 33332221100
Q ss_pred --------c------------------------------ccc---------------------------ccCCCeeEccC
Q 002121 186 --------G------------------------------LDQ---------------------------LKNAKHFHFNK 200 (964)
Q Consensus 186 --------~------------------------------l~~---------------------------l~~L~~L~L~~ 200 (964)
. +.. .++|++|++++
T Consensus 177 ~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~ 256 (520)
T 2z7x_B 177 EFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISN 256 (520)
T ss_dssp CCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEE
T ss_pred chhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeec
Confidence 0 000 12566666666
Q ss_pred Cccccccccccc----CCCcceeEEEccCCcCcccCC-cc-------------------------cCCCCCCcEEEcccC
Q 002121 201 NKLSGTISEQLF----SPDMVLIHVLFDGNQLSGNIP-ES-------------------------LGYVQTLEVLRLDRN 250 (964)
Q Consensus 201 N~l~g~l~~~~f----~~~~~L~~L~l~~N~l~~~~p-~~-------------------------~~~l~~L~~L~Ls~N 250 (964)
|+++|.+|..+| ..+..|+.+++++|.+ .+| .. +..+++|++|++++|
T Consensus 257 n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n 334 (520)
T 2z7x_B 257 VKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNN 334 (520)
T ss_dssp EEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSS
T ss_pred ccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECC
Confidence 666666666654 4455555555555554 222 00 167889999999999
Q ss_pred cCccccCccccCCCCCCeeeccCccCccCC---CCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccc
Q 002121 251 ALTGKVPTNLNNLTNVNELNLAHNDLKGPF---PDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGR 327 (964)
Q Consensus 251 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~---~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 327 (964)
++++.+|..+.++++|++|+|++|++++.. ..+..+++|++|+|++|.+++......+..+++|+.|+|++|++++.
T Consensus 335 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~ 414 (520)
T 2z7x_B 335 LLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDT 414 (520)
T ss_dssp CCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGG
T ss_pred ccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcc
Confidence 999889999999999999999999999733 24889999999999999997434445688999999999999999988
Q ss_pred cChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccC---CCcccceeEeecCC-ccccccccc-C
Q 002121 328 VPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLG---SGIKNYTLILVGNP-VCTATLANT-N 402 (964)
Q Consensus 328 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~---~~~~l~~l~l~~Np-~c~~~l~~~-~ 402 (964)
.|..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|+.++.. ....++.|+|.+|| .|+|.+.+. .
T Consensus 415 ~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~ 491 (520)
T 2z7x_B 415 IFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLS 491 (520)
T ss_dssp GGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHHHH
T ss_pred hhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCchHHHH
Confidence 887765 79999999999999 5666666999999999999999999865 34457889999999 899999888 7
Q ss_pred ccccCCCCCcccccccccCCCCC
Q 002121 403 YCQLQQPTTKAYSTSLANCGGKS 425 (964)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~c~~~~ 425 (964)
.|..+.... ......|.+|.
T Consensus 492 ~~~~~~~~~---~~~~~~C~~p~ 511 (520)
T 2z7x_B 492 RWLNKNSQK---EQGSAKCSGSG 511 (520)
T ss_dssp HHHHHTTTT---EESCCBBTTTC
T ss_pred HHHHhcccc---CCCCCCcCCcc
Confidence 784433321 33556788773
No 262
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.3e-36 Score=361.91 Aligned_cols=272 Identities=24% Similarity=0.338 Sum_probs=205.8
Q ss_pred cCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCC-cchhHHHHHHHHHHHhcCCCCccceeEEEEe------eCce
Q 002121 627 NNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGS-MQGGLEFKTEIELLSRVHHKNLVGLVGFCFE------QGEQ 698 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~~~~ 698 (964)
++|.+.+.||+|+||.||+|.. .+|+.||||+++... ......+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6799999999999999999996 468999999987643 3335678999999999999999999998765 6678
Q ss_pred EEEEEeccCCChhhhhcCCC-CCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCc---EEEeeccc
Q 002121 699 MLVYEFMANGTLRESLSGRS-GIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLT---AKVADFGL 774 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~DFGl 774 (964)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccc
Confidence 99999999999999998643 336899999999999999999999988 999999999999997765 99999999
Q ss_pred ceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCccc----
Q 002121 775 SKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEE---- 850 (964)
Q Consensus 775 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---- 850 (964)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........|...........
T Consensus 171 a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 171 AKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSC
T ss_pred cccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhh
Confidence 98765432 22446799999999999999999999999999999999999999976544333221111100000
Q ss_pred -----ccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHH-----HHHHHHHHHHhC
Q 002121 851 -----HYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSE-----VVKAIETLLQND 905 (964)
Q Consensus 851 -----~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-----vl~~L~~~~~~~ 905 (964)
........ +............+.+++.+||+.||++|||+.| ..+.++.++...
T Consensus 248 ~~l~g~~~~~~~l-p~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 248 DDLTGAVKFSSVL-PTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCCSSSCCCCSSS-CCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhcccccccccc-CCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 00000000 0000112223466789999999999999999988 567777777544
No 263
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.8e-35 Score=338.23 Aligned_cols=339 Identities=17% Similarity=0.130 Sum_probs=282.8
Q ss_pred CCCCCCCCCCCCCccEEe---cC------------------CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCC
Q 002121 44 PTWKNSDDPCGSWEGVTC---NN------------------SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLT 102 (964)
Q Consensus 44 ~~W~~~~~~C~~w~gv~C---~~------------------~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~ 102 (964)
++|....+||+.|.+..| +. ..++.|+++++.++..-+..+..+++|++|+|++| .+.
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n-~i~ 82 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDL-QIE 82 (390)
T ss_dssp ---CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTS-CCC
T ss_pred CCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCC-ccc
Confidence 578877788866555544 31 46788999999988544344789999999999999 788
Q ss_pred CCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccC
Q 002121 103 GSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTI 182 (964)
Q Consensus 103 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~ 182 (964)
+..+..|..+++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|.++++|++|+|++|++++..|
T Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~---- 158 (390)
T 3o6n_A 83 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED---- 158 (390)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT----
T ss_pred ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccCh----
Confidence 8888899999999999999999998888889999999999999999995555567999999999999999985444
Q ss_pred CCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccC
Q 002121 183 TSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNN 262 (964)
Q Consensus 183 ~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 262 (964)
..+..+++|++|++++|++++ ++ +..+++|+.|++++|.+++ +....+|+.|++++|.++.. |..+
T Consensus 159 --~~~~~l~~L~~L~l~~n~l~~-~~---~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~~-- 224 (390)
T 3o6n_A 159 --DTFQATTSLQNLQLSSNRLTH-VD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV-- 224 (390)
T ss_dssp --TTTSSCTTCCEEECCSSCCSB-CC---GGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECCC--
T ss_pred --hhccCCCCCCEEECCCCcCCc-cc---cccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-cccc--
Confidence 457889999999999999984 33 4556889999999999985 34457899999999999954 4433
Q ss_pred CCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEE
Q 002121 263 LTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVK 342 (964)
Q Consensus 263 l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 342 (964)
.++|+.|+|++|.+++. +.+..+++|++|+|++|.++ ...|..|..+++|+.|+|++|++++ +|..+..+++|+.|+
T Consensus 225 ~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~ 301 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 301 (390)
T ss_dssp CSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC-EEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEE
T ss_pred cccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCC-CcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEE
Confidence 57999999999999976 56899999999999999997 6678889999999999999999996 466678899999999
Q ss_pred cCCcccccccCCCCccCCCCcEEeccCCcceeeccCCCcccceeEeecCC-cccccccccCccc
Q 002121 343 LRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIKNYTLILVGNP-VCTATLANTNYCQ 405 (964)
Q Consensus 343 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~l~l~~Np-~c~~~l~~~~~~~ 405 (964)
|++|+++.. +..+..+++|+.|+|++|+++.++......++.|++.+|| .|+|.......|.
T Consensus 302 L~~n~l~~~-~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~ 364 (390)
T 3o6n_A 302 LSHNHLLHV-ERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSLRALFRNVA 364 (390)
T ss_dssp CCSSCCCCC-GGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHHHHHHTTTCC
T ss_pred CCCCcceec-CccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCccchhHHHHHHHHH
Confidence 999999854 5567889999999999999999998888889999999999 7888776666653
No 264
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-35 Score=364.28 Aligned_cols=240 Identities=22% Similarity=0.346 Sum_probs=193.7
Q ss_pred hcCCCccceeecCCcEEEEEEEec--CCcEEEEEEecCCCc-chhHHHHHHHHHHHhcCCCCccceeEEEEeeCc-----
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS--DGQVVAIKRAQQGSM-QGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGE----- 697 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~--~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----- 697 (964)
.++|.+.+.||+|+||+||+|... +|+.||||++..... .....+.+|++++++++|||||++++++.+.+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999975 589999999875432 334578899999999999999999999998776
Q ss_pred eEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 698 QMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 698 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
.|+||||+++++|.+++.. .++|.+++.++.||++||+|||+.+ ||||||||+|||++.+ .+||+|||+++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchh
Confidence 7999999999999988754 5899999999999999999999988 9999999999999986 999999999987
Q ss_pred ecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccc
Q 002121 778 VSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEM 857 (964)
Q Consensus 778 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (964)
.... ....||++|+|||++.++. +.++|||||||++|||++|..|+.... ...
T Consensus 231 ~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~--------------------~~~ 283 (681)
T 2pzi_A 231 INSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRY--------------------VDG 283 (681)
T ss_dssp TTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEE--------------------CSS
T ss_pred cccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccc--------------------ccc
Confidence 6432 3356999999999987654 899999999999999999998875310 000
Q ss_pred cCccchhhhHHHHHHHHHHHHHhhhcCCCCCCC-HHHHHHHHHHHH
Q 002121 858 MDPTIRNTVLLGFRRYLELALQCVEESATDRPT-MSEVVKAIETLL 902 (964)
Q Consensus 858 ~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~~~~ 902 (964)
+... .........+.+++.+||+.||++||+ ++++.+.+..++
T Consensus 284 ~~~~--~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 284 LPED--DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp CCTT--CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred cccc--ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 0000 011112245778999999999999995 666667676654
No 265
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.5e-35 Score=355.91 Aligned_cols=338 Identities=17% Similarity=0.133 Sum_probs=290.0
Q ss_pred CCCCCCCCCCCC---CccEEecC------------------CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCC
Q 002121 44 PTWKNSDDPCGS---WEGVTCNN------------------SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLT 102 (964)
Q Consensus 44 ~~W~~~~~~C~~---w~gv~C~~------------------~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~ 102 (964)
++|..+.+||.. |.++.|+. .+++.++++++.++...+..+..+++|++|+|++| .+.
T Consensus 10 ~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n-~l~ 88 (597)
T 3oja_B 10 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDL-QIE 88 (597)
T ss_dssp -CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTS-CCC
T ss_pred cCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCC-CCC
Confidence 678877777743 66665541 35688999999998655555789999999999999 799
Q ss_pred CCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccC
Q 002121 103 GSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTI 182 (964)
Q Consensus 103 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~ 182 (964)
+..|..|+.+++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|+++++|++|+|++|.+++..|
T Consensus 89 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~---- 164 (597)
T 3oja_B 89 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED---- 164 (597)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT----
T ss_pred CCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCCh----
Confidence 8888899999999999999999998888889999999999999999996666678999999999999999996555
Q ss_pred CCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccC
Q 002121 183 TSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNN 262 (964)
Q Consensus 183 ~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 262 (964)
..+..+++|+.|+|++|.+++ ++ +..+++|+.|++++|.+++ +....+|+.|++++|.++...+ .+
T Consensus 165 --~~~~~l~~L~~L~L~~N~l~~-~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~-~~-- 230 (597)
T 3oja_B 165 --DTFQATTSLQNLQLSSNRLTH-VD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRG-PV-- 230 (597)
T ss_dssp --TTTTTCTTCCEEECTTSCCSB-CC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEEC-SC--
T ss_pred --hhhhcCCcCcEEECcCCCCCC-cC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccccc-cc--
Confidence 457889999999999999984 44 4456789999999999985 3455789999999999994433 33
Q ss_pred CCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEE
Q 002121 263 LTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVK 342 (964)
Q Consensus 263 l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 342 (964)
.++|+.|+|++|.+++. +.+..+++|+.|+|++|.++ ...|..|..+++|+.|+|++|++++ +|..+..+++|+.|+
T Consensus 231 ~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 307 (597)
T 3oja_B 231 NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 307 (597)
T ss_dssp CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC-EEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccC-CCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEE
Confidence 36899999999999985 66899999999999999998 6678889999999999999999997 467778899999999
Q ss_pred cCCcccccccCCCCccCCCCcEEeccCCcceeeccCCCcccceeEeecCC-cccccccccCcc
Q 002121 343 LRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIKNYTLILVGNP-VCTATLANTNYC 404 (964)
Q Consensus 343 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~l~l~~Np-~c~~~l~~~~~~ 404 (964)
|++|+++. +|..+..+++|+.|+|++|+|+.++......+..|+|.+|| .|+|.......+
T Consensus 308 Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~~~~~~~~~~~~ 369 (597)
T 3oja_B 308 LSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSLRALFRNV 369 (597)
T ss_dssp CCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHHHHHHTTTC
T ss_pred CCCCCCCc-cCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCCChhHHHHHHHH
Confidence 99999995 56677899999999999999999998888889999999999 788866555544
No 266
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.8e-35 Score=349.64 Aligned_cols=205 Identities=20% Similarity=0.197 Sum_probs=162.6
Q ss_pred CcceeEEEccCCcCcccC--CcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCC--CCCCCCCCC
Q 002121 215 DMVLIHVLFDGNQLSGNI--PESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP--DLSQMNSLS 290 (964)
Q Consensus 215 ~~~L~~L~l~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~--~l~~l~~L~ 290 (964)
+++|++|++++|++++.. +..+..+++|++|++++|.+++..+ .+.++++|++|++++|.+++.++ .+..+++|+
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 345566666666665443 4556667777777777777774444 48888899999999999888766 488999999
Q ss_pred EEEccCCCCCCCCCCcccCCCCCCcEEECCCCccc-cccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccC
Q 002121 291 YVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQ-GRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQN 369 (964)
Q Consensus 291 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 369 (964)
+|++++|.+. ...+..+.++++|+.|+|++|++. +.+|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++
T Consensus 425 ~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 425 YLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp EEECTTSCCE-ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EEeCcCCccc-ccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 9999999997 667888999999999999999998 68999999999999999999999999999999999999999999
Q ss_pred CcceeeccCC---CcccceeEeecCC-cccccccccC-ccccCCCCCcccccccccCCCC
Q 002121 370 NQISAITLGS---GIKNYTLILVGNP-VCTATLANTN-YCQLQQPTTKAYSTSLANCGGK 424 (964)
Q Consensus 370 N~l~~i~~~~---~~~l~~l~l~~Np-~c~~~l~~~~-~~~~~~~~~~~~~~~~~~c~~~ 424 (964)
|+++.++... ...++.|++.+|| .|+|...... .|...... .+ .....|.+|
T Consensus 504 n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~-~~--~~~~~C~~~ 560 (570)
T 2z63_A 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQ-KE--QGSAKCSGS 560 (570)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGG-GE--ESCCBBTTT
T ss_pred CcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccc-cC--CCchhhCCC
Confidence 9999997653 3457889999999 8999876654 67333222 11 122277766
No 267
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=8.5e-35 Score=317.65 Aligned_cols=234 Identities=10% Similarity=0.050 Sum_probs=182.2
Q ss_pred hcCCCccceeecCCcEEEEEEEec-CCcEEEEEEecCCCcc---hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEE
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSMQ---GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 701 (964)
.++|.+.+.||+|+||.||+|+.. +|+.||||++...... ....+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 357899999999999999999975 5899999999865432 235789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||+++++|.+++... ....++.+++.|++.||+|||+.+ |+||||||+|||++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc--------
Confidence 9999999999999642 344568899999999999999988 9999999999999999999998543
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCcc
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPT 861 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 861 (964)
|++| ++.++|||||||++|||+||+.||........ +.... ....... +.
T Consensus 175 --------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-----~~~~~---~~~~~~~-~~ 224 (286)
T 3uqc_A 175 --------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-----LAPAE---RDTAGQP-IE 224 (286)
T ss_dssp --------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-----SEECC---BCTTSCB-CC
T ss_pred --------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-----hHHHH---HHhccCC-CC
Confidence 3332 68899999999999999999999964321000 00000 0000000 00
Q ss_pred chhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHhC
Q 002121 862 IRNTVLLGFRRYLELALQCVEESATDRPTMSEVVKAIETLLQND 905 (964)
Q Consensus 862 l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 905 (964)
...........+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 225 ~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 225 PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 001111122457799999999999999 9999999999987544
No 268
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.6e-34 Score=347.02 Aligned_cols=310 Identities=19% Similarity=0.193 Sum_probs=204.1
Q ss_pred CccEEecC-----------CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhcccccc
Q 002121 56 WEGVTCNN-----------SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCG 124 (964)
Q Consensus 56 w~gv~C~~-----------~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~ 124 (964)
+..+.|.. ..++.|+|++|.+++..|..|+++++|++|+|++| .+.+..|..|+++++|++|+|++|.
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n-~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRC-QIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTC-CCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCC-ccceeChhhccCccccCeeeCCCCc
Confidence 55688863 47899999999999988999999999999999999 7999899999999999999999999
Q ss_pred ccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccc-cCcccCCCCccccccCCCeeEccCCcc
Q 002121 125 FTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGS-IPVSTITSPGLDQLKNAKHFHFNKNKL 203 (964)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~-iP~~~~~~~~l~~l~~L~~L~L~~N~l 203 (964)
+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++. +| .+..+++|++|++++|++
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~-------~~~~l~~L~~L~L~~n~l 165 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLP-------KGFPTEKLKVLDFQNNAI 165 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCC-------TTCCCTTCCEEECCSSCC
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcc-------cccCCcccCEEEcccCcc
Confidence 9988899999999999999999999987788899999999999999999852 23 333467777777777777
Q ss_pred cccccccccCCCccee--EEEccCCcCcccCC------------------------------------------------
Q 002121 204 SGTISEQLFSPDMVLI--HVLFDGNQLSGNIP------------------------------------------------ 233 (964)
Q Consensus 204 ~g~l~~~~f~~~~~L~--~L~l~~N~l~~~~p------------------------------------------------ 233 (964)
+ .++...|..+.+|+ .|++++|++++..|
T Consensus 166 ~-~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~ 244 (606)
T 3t6q_A 166 H-YLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDIS 244 (606)
T ss_dssp C-EECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCC
T ss_pred c-ccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccC
Confidence 6 33333344444444 45555555554444
Q ss_pred ---------------------------cccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCC-CCCC
Q 002121 234 ---------------------------ESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-DLSQ 285 (964)
Q Consensus 234 ---------------------------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~ 285 (964)
..|..+++|+.|++++|.++ .+|..+.++++|++|+|++|.+++.++ .+..
T Consensus 245 ~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 323 (606)
T 3t6q_A 245 PAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASN 323 (606)
T ss_dssp GGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGG
T ss_pred hhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhc
Confidence 34444444555555555444 444444444455555555554444433 2444
Q ss_pred CCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCcccccc--ChhccCCCCCCEEEcCCcccccccCCCCccCCCCc
Q 002121 286 MNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRV--PDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQ 363 (964)
Q Consensus 286 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 363 (964)
+++|++|++++|.+.+...+..+..+++|++|+|++|++++.. +..+..+++|+.|+|++|++.+..+..+..+++|+
T Consensus 324 l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 403 (606)
T 3t6q_A 324 FPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLE 403 (606)
T ss_dssp CTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCS
T ss_pred cCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCC
Confidence 4444444444444443333334444555555555555554443 44444555555555555555544444455555555
Q ss_pred EEeccCCcceee
Q 002121 364 LVDLQNNQISAI 375 (964)
Q Consensus 364 ~L~L~~N~l~~i 375 (964)
.|+|++|+++.+
T Consensus 404 ~L~l~~n~l~~~ 415 (606)
T 3t6q_A 404 LLDLAFTRLKVK 415 (606)
T ss_dssp EEECTTCCEECC
T ss_pred eEECCCCcCCCc
Confidence 555555555443
No 269
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.8e-34 Score=336.93 Aligned_cols=305 Identities=17% Similarity=0.229 Sum_probs=255.5
Q ss_pred CCCeeEEEcCCCCcccccc-CCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcc--cCCCCCc
Q 002121 63 NSRVTALGLSTMGLTGKLS-GDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDE--IGNLAEL 139 (964)
Q Consensus 63 ~~~v~~L~L~~~~l~g~~~-~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L 139 (964)
..+++.|+|++|.+.+.++ ..|..+++|++|+|++| .+.+..|..|+++++|++|+|++|.+++.+|.. |..+++|
T Consensus 53 l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L 131 (455)
T 3v47_A 53 LQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN-QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSL 131 (455)
T ss_dssp CTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC-TTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTC
T ss_pred CccccEEECcCCcccceECcccccccccCCEEeCCCC-ccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccC
Confidence 3689999999999987775 57999999999999999 798888999999999999999999999866555 9999999
Q ss_pred cEEEcccCcccCcCCCc-CCCccccccccccccccccccCcccCCCCccccc--cCCCeeEccCCcccccccccc-----
Q 002121 140 SFLALNSNNFSGRIPPS-LGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQL--KNAKHFHFNKNKLSGTISEQL----- 211 (964)
Q Consensus 140 ~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l--~~L~~L~L~~N~l~g~l~~~~----- 211 (964)
++|+|++|++++..|.. |.++++|++|+|++|++++..|.. +..+ .+|+.|++++|.+.+ ++...
T Consensus 132 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~------l~~l~~~~L~~L~l~~n~l~~-~~~~~~~~~~ 204 (455)
T 3v47_A 132 EMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEED------LLNFQGKHFTLLRLSSITLQD-MNEYWLGWEK 204 (455)
T ss_dssp CEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTT------SGGGTTCEEEEEECTTCBCTT-CSTTCTTHHH
T ss_pred CEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhh------hhccccccccccccccCcccc-cchhhccccc
Confidence 99999999999887876 899999999999999999766632 3333 455555555555552 22111
Q ss_pred ---cCCCcceeEEEccCCcCcccCCccc-------------------------------------C--CCCCCcEEEccc
Q 002121 212 ---FSPDMVLIHVLFDGNQLSGNIPESL-------------------------------------G--YVQTLEVLRLDR 249 (964)
Q Consensus 212 ---f~~~~~L~~L~l~~N~l~~~~p~~~-------------------------------------~--~l~~L~~L~Ls~ 249 (964)
+...++|++|++++|++++..|..+ . ..++|+.|++++
T Consensus 205 ~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~ 284 (455)
T 3v47_A 205 CGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSK 284 (455)
T ss_dssp HCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCS
T ss_pred cccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecC
Confidence 1123455555555555554333322 1 126899999999
Q ss_pred CcCccccCccccCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCcccccc
Q 002121 250 NALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRV 328 (964)
Q Consensus 250 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 328 (964)
|.+++.+|..|..+++|++|+|++|++++.++ .+..+++|++|+|++|.++ ...+..|..+++|++|+|++|++++..
T Consensus 285 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 363 (455)
T 3v47_A 285 SKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHIRALG 363 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-EECGGGGTTCTTCCEEECCSSCCCEEC
T ss_pred ccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccC-CcChhHhcCcccCCEEECCCCcccccC
Confidence 99999999999999999999999999999877 5899999999999999997 677888999999999999999999999
Q ss_pred ChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeec
Q 002121 329 PDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAIT 376 (964)
Q Consensus 329 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 376 (964)
|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|+|++-.
T Consensus 364 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 364 DQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred hhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 999999999999999999999998888999999999999999999743
No 270
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.6e-34 Score=317.85 Aligned_cols=230 Identities=22% Similarity=0.287 Sum_probs=179.4
Q ss_pred hcCCCcc-ceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcchhHHHHHHHHHH-HhcCCCCccceeEEEEe----eCce
Q 002121 626 SNNFSES-NEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQGGLEFKTEIELL-SRVHHKNLVGLVGFCFE----QGEQ 698 (964)
Q Consensus 626 ~~~~~~~-~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~----~~~~ 698 (964)
.++|... +.||+|+||.||+|.. .+|+.||+|+++. ...+.+|++++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3466666 7799999999999996 5789999999864 24678899988 55589999999999987 6788
Q ss_pred EEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECC---CCcEEEeecccc
Q 002121 699 MLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDE---NLTAKVADFGLS 775 (964)
Q Consensus 699 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DFGla 775 (964)
++||||+++|+|.+++.......+++.++..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998766567999999999999999999999988 999999999999998 789999999998
Q ss_pred eeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCCCCchhHHHHHHHhccCcccccccc
Q 002121 776 KLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLT 855 (964)
Q Consensus 776 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (964)
+... +..++.++|||||||++|||++|+.||........ ...... ..
T Consensus 168 ~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----~~~~~~----~~ 214 (299)
T 3m2w_A 168 KETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----SPGMKT----RI 214 (299)
T ss_dssp EECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------CCSCC----SS
T ss_pred cccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----hHHHHH----HH
Confidence 7542 13467899999999999999999999964321100 000000 00
Q ss_pred cccCccchhh-hHHHHHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 002121 856 EMMDPTIRNT-VLLGFRRYLELALQCVEESATDRPTMSEVVK 896 (964)
Q Consensus 856 ~~~d~~l~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 896 (964)
.......... .......+.+++.+||+.||++|||+.|+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 215 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000000000 1112356779999999999999999999986
No 271
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=7.2e-35 Score=335.36 Aligned_cols=240 Identities=15% Similarity=0.136 Sum_probs=179.4
Q ss_pred hcCCCccceeecCCcEEEEEEEe-cCCcEEEEEEecCCCcc---hhHHHHHHHHHHHhcCC-CCccc---------eeE-
Q 002121 626 SNNFSESNEIGSGGYGKVYRGML-SDGQVVAIKRAQQGSMQ---GGLEFKTEIELLSRVHH-KNLVG---------LVG- 690 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H-~nIv~---------l~~- 690 (964)
..+|...+.||+|+||+||+|+. .+|+.||||++...... ..+.+++|+.+++.++| +|... ...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 44577788999999999999995 57999999998843322 24679999999999987 32211 111
Q ss_pred -----------EEEe-----eCceEEEEEeccCCChhhhhc-----CCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCe
Q 002121 691 -----------FCFE-----QGEQMLVYEFMANGTLRESLS-----GRSGIHLDWKRRLRIALGSARGLAYLHELANPPI 749 (964)
Q Consensus 691 -----------~~~~-----~~~~~lV~E~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 749 (964)
++.. ....+++|+++ +|+|.+++. ...+..++|..++.++.|+++||+|||+.+ |
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence 1111 12356777755 679999884 233456899999999999999999999988 9
Q ss_pred eccCCCCCcEEECCCCcEEEeecccceeecCCCCCceeecccccCcccCcccc----------ccCCCCCchhHHHHHHH
Q 002121 750 IHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYY----------MTQQLTEKSDVYSFGVV 819 (964)
Q Consensus 750 vH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDv~S~Gvv 819 (964)
|||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||+
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi 306 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence 99999999999999999999999999865322 344567 999999999 55568899999999999
Q ss_pred HHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHHHHHhhhcCCCCCCCHHHHH
Q 002121 820 MLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLELALQCVEESATDRPTMSEVV 895 (964)
Q Consensus 820 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 895 (964)
+|||++|+.||....... . ....+... . .....+.+++.+||+.||++||++.|++
T Consensus 307 l~elltg~~Pf~~~~~~~---------~------~~~~~~~~-~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 307 IYWIWCADLPNTDDAALG---------G------SEWIFRSC-K----NIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHHSSCCCCTTGGGS---------C------SGGGGSSC-C----CCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHHCCCCCCCcchhh---------h------HHHHHhhc-c----cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999999999996432100 0 00001100 0 0114577899999999999999987774
No 272
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.9e-35 Score=327.58 Aligned_cols=242 Identities=18% Similarity=0.195 Sum_probs=184.3
Q ss_pred hcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCc--------chhHHHHHHHHHHHhcC---------CCCccce
Q 002121 626 SNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSM--------QGGLEFKTEIELLSRVH---------HKNLVGL 688 (964)
Q Consensus 626 ~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------H~nIv~l 688 (964)
.++|...+.||+|+||+||+|+. +|+.||||+++.... ...+.+.+|++++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35677889999999999999998 689999999875432 22367899999999986 7777777
Q ss_pred eEEEE-----------------e-------------eCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHH
Q 002121 689 VGFCF-----------------E-------------QGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGL 738 (964)
Q Consensus 689 ~~~~~-----------------~-------------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL 738 (964)
.+++. + .+..++|||||++|++.+.+.. ..+++.++..++.||+.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 77643 1 5789999999999987777654 3589999999999999999
Q ss_pred HHHh-hcCCCCeeccCCCCCcEEECCCC--------------------cEEEeecccceeecCCCCCceeecccccCccc
Q 002121 739 AYLH-ELANPPIIHRDVKSTNILLDENL--------------------TAKVADFGLSKLVSDSSKGHVSTQVKGTMGYL 797 (964)
Q Consensus 739 ~yLH-~~~~~~ivH~Dlk~~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~ 797 (964)
+||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...||+.|+
T Consensus 175 ~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~ 244 (336)
T 2vuw_A 175 AVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSM 244 (336)
T ss_dssp HHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTT
T ss_pred HHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeeccc
Confidence 9999 888 99999999999999887 9999999999976532 246999999
Q ss_pred CccccccCCCCCchhHHHHHHH-HHHHHhCCCCCCCCchhHHHHHHHhccCcccccccccccCccchhhhHHHHHHHHHH
Q 002121 798 DPEYYMTQQLTEKSDVYSFGVV-MLELITAKQPIEKGKYVVREVRTAMNRDDEEHYGLTEMMDPTIRNTVLLGFRRYLEL 876 (964)
Q Consensus 798 aPE~~~~~~~~~~sDv~S~Gvv-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~l 876 (964)
|||++.+.. +.++||||+|++ .+++++|..||.................. .... ............+.++
T Consensus 245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~~~~s~~~~dl 315 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMT-----FKTK---CNTPAMKQIKRKIQEF 315 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCC-----CSSC---CCSHHHHHHHHHHHHH
T ss_pred ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhc-----cCcc---cchhhhhhcCHHHHHH
Confidence 999998665 899999998777 78899999998432111111111111111 0000 0111122344667899
Q ss_pred HHHhhhcCCCCCCCHHHHH
Q 002121 877 ALQCVEESATDRPTMSEVV 895 (964)
Q Consensus 877 i~~cl~~dP~~RPs~~evl 895 (964)
+.+||+.| |++|++
T Consensus 316 i~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 316 HRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHGGGSS-----SHHHHH
T ss_pred HHHHhccC-----CHHHHH
Confidence 99999976 888887
No 273
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.8e-33 Score=346.08 Aligned_cols=318 Identities=19% Similarity=0.272 Sum_probs=255.0
Q ss_pred cCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCC-CCC-CCCCCCCCcc-------cchhhccccccccCcCCc-
Q 002121 62 NNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGG-LTG-SLSPRIGDLQ-------KLNILILAGCGFTGNIPD- 131 (964)
Q Consensus 62 ~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~-l~~-~~p~~l~~l~-------~L~~L~L~~n~l~~~~p~- 131 (964)
...+++.|+|++|++.|.+|..|+++++|++|+|++| . +.| .+|..++++. +|++|+|++|+++ .+|.
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N-~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~ 566 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN-RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPAS 566 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC-TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCH
T ss_pred cCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC-CCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCCh
Confidence 3467899999999999999999999999999999999 5 888 7888777766 8999999999999 8888
Q ss_pred -ccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccC-CCeeEccCCcccccccc
Q 002121 132 -EIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKN-AKHFHFNKNKLSGTISE 209 (964)
Q Consensus 132 -~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~-L~~L~L~~N~l~g~l~~ 209 (964)
.|+++++|+.|+|++|+++ .+| .|+++++|++|+|++|+++ .+| ..+..+++ |+.|+|++|+++ .+|.
T Consensus 567 ~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp------~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 567 ASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIP------EDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp HHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCC------TTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred hhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cch------HHHhhccccCCEEECcCCCCC-cCch
Confidence 8999999999999999998 777 8888899999999999988 777 34667777 777777777776 5664
Q ss_pred cccC------------------------------CCcceeEEEccCCcCcccCCcc-cCCCCCCcEEEcccCcCccccCc
Q 002121 210 QLFS------------------------------PDMVLIHVLFDGNQLSGNIPES-LGYVQTLEVLRLDRNALTGKVPT 258 (964)
Q Consensus 210 ~~f~------------------------------~~~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~ 258 (964)
.+.. ...+|+.|++++|+|+ .+|.. +..+++|+.|+|++|+|+ .+|.
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~ 714 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPE 714 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCT
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccCh
Confidence 3211 1124555555555555 33333 346788899999999888 5665
Q ss_pred cccC--------CCCCCeeeccCccCccCCCCCC--CCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCC------C
Q 002121 259 NLNN--------LTNVNELNLAHNDLKGPFPDLS--QMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEF------G 322 (964)
Q Consensus 259 ~~~~--------l~~L~~L~Ls~N~l~~~~~~l~--~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~------N 322 (964)
.+.. +++|+.|+|++|+|+.++..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |
T Consensus 715 ~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~--lp~~l~~L~~L~~L~Ls~N~~ls~N 792 (876)
T 4ecn_A 715 NSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFSS--FPTQPLNSSQLKAFGIRHQRDAEGN 792 (876)
T ss_dssp TSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSCCSS--CCCGGGGCTTCCEEECCCCBCTTCC
T ss_pred HHhccccccccccCCccEEECCCCCCccchHHhhhccCCCcCEEEeCCCCCCc--cchhhhcCCCCCEEECCCCCCcccc
Confidence 4433 2389999999999997766666 99999999999999974 688899999999999976 8
Q ss_pred ccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCCCcc---cceeEeecCC---cccc
Q 002121 323 SLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIK---NYTLILVGNP---VCTA 396 (964)
Q Consensus 323 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~---l~~l~l~~Np---~c~~ 396 (964)
++.+.+|..|..+++|+.|+|++|++ +.+|..+. ++|+.|+|++|+|..++...+.. ...+.|.+|+ ++.|
T Consensus 793 ~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC 869 (876)
T 4ecn_A 793 RILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGC 869 (876)
T ss_dssp BCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESC
T ss_pred cccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccccCCC
Confidence 89999999999999999999999999 66676655 69999999999999998765543 4567788887 3455
Q ss_pred cc
Q 002121 397 TL 398 (964)
Q Consensus 397 ~l 398 (964)
..
T Consensus 870 ~~ 871 (876)
T 4ecn_A 870 DA 871 (876)
T ss_dssp GG
T ss_pred CC
Confidence 43
No 274
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.3e-32 Score=338.08 Aligned_cols=310 Identities=20% Similarity=0.188 Sum_probs=238.1
Q ss_pred CCccEEecC-----------CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccc
Q 002121 55 SWEGVTCNN-----------SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGC 123 (964)
Q Consensus 55 ~w~gv~C~~-----------~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n 123 (964)
.+..|.|+. .+++.|+|++|++++..+..|.++++|++|+|++| .+.+..|..|+++++|++|+|++|
T Consensus 5 ~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 5 SHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFN-TISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp BSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSS-CCCCCCTTHHHHCTTCCEEECCSS
T ss_pred ECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCC-ccCccCHHHHhcccCcCEEECCCC
Confidence 556677752 47999999999999888888999999999999999 799999999999999999999999
Q ss_pred cccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcc
Q 002121 124 GFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKL 203 (964)
Q Consensus 124 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l 203 (964)
.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..| ..+..+++|++|++++|++
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~------~~~~~l~~L~~L~L~~n~l 157 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKL------GTQVQLENLQELLLSNNKI 157 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCC------CSSSCCTTCCEEECCSSCC
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCc------hhhcccccCCEEEccCCcc
Confidence 9996555679999999999999999998778899999999999999999996655 4577899999999999999
Q ss_pred cccccccc-cCCCcceeEEEccCCcCcccCCcccCCC---------------------------CCCcEEEcccCcCccc
Q 002121 204 SGTISEQL-FSPDMVLIHVLFDGNQLSGNIPESLGYV---------------------------QTLEVLRLDRNALTGK 255 (964)
Q Consensus 204 ~g~l~~~~-f~~~~~L~~L~l~~N~l~~~~p~~~~~l---------------------------~~L~~L~Ls~N~l~~~ 255 (964)
++..+..+ +....+|++|++++|++++..|..+..+ ++|+.|++++|.+++.
T Consensus 158 ~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~ 237 (680)
T 1ziw_A 158 QALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTT 237 (680)
T ss_dssp CCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEE
T ss_pred cccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCccccc
Confidence 85444332 2345789999999999998888776654 4456666777777766
Q ss_pred cCccccCCCC--CCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCcccc-----c
Q 002121 256 VPTNLNNLTN--VNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQG-----R 327 (964)
Q Consensus 256 ~p~~~~~l~~--L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~-----~ 327 (964)
.|..|.+++. |+.|+|++|.+++.++. +..+++|++|++++|.++ ...+..|.++++|+.|+|++|...+ .
T Consensus 238 ~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~ 316 (680)
T 1ziw_A 238 SNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQ-HLFSHSLHGLFNVRYLNLKRSFTKQSISLAS 316 (680)
T ss_dssp CTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBS-EECTTTTTTCTTCCEEECTTCBCCC------
T ss_pred ChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccC-ccChhhhcCCCCccEEeccchhhhccccccc
Confidence 6777766654 77777777777776653 667777777777777776 4555566666777777766654432 1
Q ss_pred cC----hhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcc
Q 002121 328 VP----DKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQI 372 (964)
Q Consensus 328 ~p----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 372 (964)
+| ..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+
T Consensus 317 lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~ 365 (680)
T 1ziw_A 317 LPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFT 365 (680)
T ss_dssp CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBS
T ss_pred ccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCch
Confidence 22 2556666677777777776666666666666666666666653
No 275
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.2e-32 Score=329.95 Aligned_cols=163 Identities=19% Similarity=0.150 Sum_probs=148.7
Q ss_pred ccCCCcceeEEEccCCcCcccCC-cccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCcc--CCCCCCCCC
Q 002121 211 LFSPDMVLIHVLFDGNQLSGNIP-ESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKG--PFPDLSQMN 287 (964)
Q Consensus 211 ~f~~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~l~~l~ 287 (964)
.|..+++|+.|++++|++++..| ..+..+++|+.|++++|.+++..|..|.++++|++|+|++|.+++ .+..+..++
T Consensus 394 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 473 (606)
T 3vq2_A 394 NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTT 473 (606)
T ss_dssp CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCT
T ss_pred hccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCC
Confidence 45667889999999999998888 689999999999999999999999999999999999999999998 344589999
Q ss_pred CCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCC-CCcEEe
Q 002121 288 SLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGP-LLQLVD 366 (964)
Q Consensus 288 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~ 366 (964)
+|++|+|++|+++ ...|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+++.. |..+..++ +|+.|+
T Consensus 474 ~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-p~~~~~l~~~L~~l~ 551 (606)
T 3vq2_A 474 NLTFLDLSKCQLE-QISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETS-KGILQHFPKSLAFFN 551 (606)
T ss_dssp TCCEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCE-ESCGGGSCTTCCEEE
T ss_pred CCCEEECCCCcCC-ccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCccc-CHhHhhhcccCcEEE
Confidence 9999999999998 67788899999999999999999999999999999999999999999954 44588887 599999
Q ss_pred ccCCcceee
Q 002121 367 LQNNQISAI 375 (964)
Q Consensus 367 L~~N~l~~i 375 (964)
|++|+|.+-
T Consensus 552 l~~N~~~c~ 560 (606)
T 3vq2_A 552 LTNNSVACI 560 (606)
T ss_dssp CCSCCCCCS
T ss_pred ccCCCcccC
Confidence 999999973
No 276
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=326.98 Aligned_cols=308 Identities=19% Similarity=0.189 Sum_probs=237.8
Q ss_pred eEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEccc
Q 002121 67 TALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNS 146 (964)
Q Consensus 67 ~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 146 (964)
+.|++++|+++ .+|..+. ++|++|+|++| .+.+..|..|.++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n-~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQN-YISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSS-CCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCC-cccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 57999999999 6888776 89999999999 78888888999999999999999999988899999999999999999
Q ss_pred CcccCcCCCcCCCcccccccccccccccc-ccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcce--eEEEc
Q 002121 147 NNFSGRIPPSLGKLSQLYWLDLADNQLTG-SIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVL--IHVLF 223 (964)
Q Consensus 147 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L--~~L~l 223 (964)
|+|+ .+|.. .+++|++|+|++|++++ .+| ..+..+++|++|++++|++++ ..|..+.+| ++|++
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p------~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l 145 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPIC------KEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLL 145 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCC------GGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEE
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccch------hhhccCCcceEEEecCcccch----hhccccccceeeEEEe
Confidence 9999 56666 89999999999999985 455 468889999999999999874 234555566 88888
Q ss_pred cCCcC--cccCCcccCCCC-------------------------------------------------------------
Q 002121 224 DGNQL--SGNIPESLGYVQ------------------------------------------------------------- 240 (964)
Q Consensus 224 ~~N~l--~~~~p~~~~~l~------------------------------------------------------------- 240 (964)
++|++ .+..|..+..+.
T Consensus 146 ~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L 225 (520)
T 2z7x_B 146 VLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNL 225 (520)
T ss_dssp EECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEE
T ss_pred ecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhc
Confidence 88888 666666665533
Q ss_pred ----------------------CCcEEEcccCcCccccCccc-----cCCCCCCeeeccCccCccCCC------------
Q 002121 241 ----------------------TLEVLRLDRNALTGKVPTNL-----NNLTNVNELNLAHNDLKGPFP------------ 281 (964)
Q Consensus 241 ----------------------~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~~------------ 281 (964)
+|+.|++++|.++|.+|..+ .++++|+.+++++|.+ ..+.
T Consensus 226 ~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L 304 (520)
T 2z7x_B 226 TLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNI 304 (520)
T ss_dssp EEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCC
T ss_pred cccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCce
Confidence 67777777777777777776 5555555555555554 1110
Q ss_pred --------------CCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCcccc--ccChhccCCCCCCEEEcCC
Q 002121 282 --------------DLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQG--RVPDKLFSYSQIQQVKLRN 345 (964)
Q Consensus 282 --------------~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~ 345 (964)
....+++|++|++++|+++ ...|..+..+++|++|+|++|++++ .+|..+..+++|+.|+|++
T Consensus 305 ~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~ 383 (520)
T 2z7x_B 305 KNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLT-DTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQ 383 (520)
T ss_dssp SEEEEESSCCCCCCCCSSCCCCCEEECCSSCCC-TTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCS
T ss_pred eEEEcCCCccccccchhhCCcccEEEeECCccC-hhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCC
Confidence 0156778888888888886 4566677888888888888888876 4567778888888888888
Q ss_pred ccccc-ccCCCCccCCCCcEEeccCCcceeeccCCC-cccceeEeecCCc
Q 002121 346 NAFNN-TLDMGNAVGPLLQLVDLQNNQISAITLGSG-IKNYTLILVGNPV 393 (964)
Q Consensus 346 N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~-~~l~~l~l~~Np~ 393 (964)
|++++ .....+..+++|+.|+|++|+++....... ..++.|+|++|.+
T Consensus 384 N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l 433 (520)
T 2z7x_B 384 NSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKI 433 (520)
T ss_dssp SCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCC
T ss_pred CcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCcc
Confidence 88877 444457777778888888887765433332 4577777777764
No 277
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8e-32 Score=323.24 Aligned_cols=309 Identities=20% Similarity=0.213 Sum_probs=243.5
Q ss_pred eeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcc
Q 002121 66 VTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALN 145 (964)
Q Consensus 66 v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 145 (964)
.+.++++++++++ +|..+. ++|++|+|++| .+.+..+..|.++++|++|+|++|+|++..|+.|.++++|++|+|+
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N-~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQN-SISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSS-CCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCC-CccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 3889999999995 887665 89999999999 7998888999999999999999999998889999999999999999
Q ss_pred cCcccCcCCCcCCCcccccccccccccccc-ccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcce--eEEE
Q 002121 146 SNNFSGRIPPSLGKLSQLYWLDLADNQLTG-SIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVL--IHVL 222 (964)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L--~~L~ 222 (964)
+|+|+ .+|.. .+++|++|+|++|++++ .+| ..+..+++|++|++++|++++. .|..+.+| ++|+
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p------~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~L~L~~L~ 175 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVC------KEFGNLTKLTFLGLSAAKFRQL----DLLPVAHLHLSCIL 175 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBCCCC------GGGGGCTTCCEEEEECSBCCTT----TTGGGTTSCEEEEE
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCccccCch------HhhcccCcccEEecCCCccccC----chhhhhhceeeEEE
Confidence 99999 66766 89999999999999984 233 4688999999999999999842 24444455 9999
Q ss_pred ccCCcC--cccCCcccCCCC------------------------------------------------------------
Q 002121 223 FDGNQL--SGNIPESLGYVQ------------------------------------------------------------ 240 (964)
Q Consensus 223 l~~N~l--~~~~p~~~~~l~------------------------------------------------------------ 240 (964)
+++|++ ++..|..+..+.
T Consensus 176 L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~ 255 (562)
T 3a79_B 176 LDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVT 255 (562)
T ss_dssp EEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEE
T ss_pred eecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEE
Confidence 999999 777777766544
Q ss_pred ---------------------CCcEEEcccCcCccccCccc---------------------------------------
Q 002121 241 ---------------------TLEVLRLDRNALTGKVPTNL--------------------------------------- 260 (964)
Q Consensus 241 ---------------------~L~~L~Ls~N~l~~~~p~~~--------------------------------------- 260 (964)
+|++|++++|.++|.+|..+
T Consensus 256 L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~ 335 (562)
T 3a79_B 256 LQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKM 335 (562)
T ss_dssp EEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSE
T ss_pred ecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceE
Confidence 77888888888888887765
Q ss_pred --------------cCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCCCCC-CCCcccCCCCCCcEEECCCCcc
Q 002121 261 --------------NNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSFDPT-EAPLWFSTLPSLTTLICEFGSL 324 (964)
Q Consensus 261 --------------~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~-~~~~~~~~l~~L~~L~Ls~N~l 324 (964)
..+++|++|+|++|++++..+ .+.++++|++|+|++|++++. ..|..+..+++|+.|+|++|++
T Consensus 336 L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l 415 (562)
T 3a79_B 336 LSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSL 415 (562)
T ss_dssp EEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCC
T ss_pred EEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcC
Confidence 566777777777777777444 477777788888888777521 1235577777788888888887
Q ss_pred ccccCh-hccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCC--CcccceeEeecCCc
Q 002121 325 QGRVPD-KLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGS--GIKNYTLILVGNPV 393 (964)
Q Consensus 325 ~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~--~~~l~~l~l~~Np~ 393 (964)
++.+|. .+..+++|+.|+|++|++++..+..+. ++|+.|+|++|+|+.++... ...++.|+|.+|.+
T Consensus 416 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l 485 (562)
T 3a79_B 416 NSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQL 485 (562)
T ss_dssp BSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCC
T ss_pred CCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCC
Confidence 774443 467777788888888877766655443 67888888888888776543 34467778888774
No 278
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.98 E-value=9.8e-33 Score=307.40 Aligned_cols=274 Identities=18% Similarity=0.231 Sum_probs=143.6
Q ss_pred ccCCCHHHHHHHHHHHHHcCCCC----CCC----CCCCCCCCCCccEEecC----------CCeeEEEcCCCCccccccC
Q 002121 21 SSATDSRDAAALQSLKDAWQNTP----PTW----KNSDDPCGSWEGVTCNN----------SRVTALGLSTMGLTGKLSG 82 (964)
Q Consensus 21 ~~~~~~~~~~aL~~~k~~~~~~~----~~W----~~~~~~C~~w~gv~C~~----------~~v~~L~L~~~~l~g~~~~ 82 (964)
++....+|+.||++||.++..++ .+| ....++| .|.|+.|.. .+|+.|+|++|+++ .+|+
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~-~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~ 98 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE-TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD 98 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC-CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc-ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh
Confidence 34455678999999999996665 456 3344555 899999952 56777777777766 5666
Q ss_pred CcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccc
Q 002121 83 DIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQ 162 (964)
Q Consensus 83 ~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 162 (964)
.++.+++|++|+|++| .+. .+|..++++++|++|+|++|.++ .+|..|+++++|++|+|++|++.+.+|..+...
T Consensus 99 ~l~~l~~L~~L~L~~n-~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~-- 173 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAA-GLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST-- 173 (328)
T ss_dssp CGGGGTTCSEEEEESS-CCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE--
T ss_pred hhhhCCCCCEEECCCC-Ccc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc--
Confidence 6666666666666666 444 55555555555555555555555 455555555555555555555554554443320
Q ss_pred cccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCC
Q 002121 163 LYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTL 242 (964)
Q Consensus 163 L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L 242 (964)
.+. ..+..+++|++|+|++|+++ .+|..++.+++|
T Consensus 174 ---------~~~----------~~~~~l~~L~~L~L~~n~l~--------------------------~lp~~l~~l~~L 208 (328)
T 4fcg_A 174 ---------DAS----------GEHQGLVNLQSLRLEWTGIR--------------------------SLPASIANLQNL 208 (328)
T ss_dssp ---------C-C----------CCEEESTTCCEEEEEEECCC--------------------------CCCGGGGGCTTC
T ss_pred ---------cch----------hhhccCCCCCEEECcCCCcC--------------------------cchHhhcCCCCC
Confidence 000 11223333333333333332 333444445555
Q ss_pred cEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCC
Q 002121 243 EVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEF 321 (964)
Q Consensus 243 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~ 321 (964)
+.|+|++|.++ .+|..|..+++|++|+|++|.+.+..|. +..+++|++|+|++|++. ..+|..+.++++|+.|+|++
T Consensus 209 ~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~-~~~p~~~~~l~~L~~L~L~~ 286 (328)
T 4fcg_A 209 KSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNL-LTLPLDIHRLTQLEKLDLRG 286 (328)
T ss_dssp CEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTC-CBCCTTGGGCTTCCEEECTT
T ss_pred CEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCch-hhcchhhhcCCCCCEEeCCC
Confidence 55555555555 2333444555555555555444443332 444444444444444443 33333444444444444444
Q ss_pred CccccccChhccCCCCCCEEEcCCccc
Q 002121 322 GSLQGRVPDKLFSYSQIQQVKLRNNAF 348 (964)
Q Consensus 322 N~l~~~~p~~~~~l~~L~~L~L~~N~l 348 (964)
|++.+.+|..+..+++|+.+++..|.+
T Consensus 287 n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 287 CVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred CCchhhccHHHhhccCceEEeCCHHHH
Confidence 444444555454444444444444433
No 279
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.98 E-value=1e-31 Score=337.32 Aligned_cols=316 Identities=21% Similarity=0.200 Sum_probs=236.0
Q ss_pred eEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcC-CcccCCCCCccEEEcc
Q 002121 67 TALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNI-PDEIGNLAELSFLALN 145 (964)
Q Consensus 67 ~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls 145 (964)
...+.++++++ .+|. ..++|++|||++| .+.+..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|+
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N-~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls 81 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFN-YIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLG 81 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESC-CCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCC-cCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECC
Confidence 34566778887 4565 4688999999999 799999999999999999999999776666 7889999999999999
Q ss_pred cCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccC
Q 002121 146 SNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDG 225 (964)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~ 225 (964)
+|.+++..|..|.++++|++|+|++|.+++.+|.. ..+..+++|++|+|++|.+++..+...|..+++|++|++++
T Consensus 82 ~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~----~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~ 157 (844)
T 3j0a_A 82 SSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKD----GYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSS 157 (844)
T ss_dssp TCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTT----CCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEES
T ss_pred CCcCcccCHhHccCCcccCEeeCcCCCCCcccccC----ccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCC
Confidence 99999999999999999999999999999766632 34889999999999999999776767889999999999999
Q ss_pred CcCcccCCcccCCC--CCCcEEEcccCcCccccCccccCCCC------CCeeeccCccCccCCCC---------------
Q 002121 226 NQLSGNIPESLGYV--QTLEVLRLDRNALTGKVPTNLNNLTN------VNELNLAHNDLKGPFPD--------------- 282 (964)
Q Consensus 226 N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~~~--------------- 282 (964)
|++++..+..+..+ ++|+.|+|++|.+++..|..+..+++ |+.|+|++|.+++..+.
T Consensus 158 N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~ 237 (844)
T 3j0a_A 158 NQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLI 237 (844)
T ss_dssp SCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEE
T ss_pred CcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCccccccee
Confidence 99998888887766 67777777777777766666655554 66667666655543221
Q ss_pred ----------------------CCC--CCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCC
Q 002121 283 ----------------------LSQ--MNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQI 338 (964)
Q Consensus 283 ----------------------l~~--l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 338 (964)
+.+ .++|+.|+|++|.+. ...+..|..+++|+.|+|++|++.+..|..|.++++|
T Consensus 238 l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 316 (844)
T 3j0a_A 238 LAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVF-SLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNL 316 (844)
T ss_dssp CCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCC-EECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSC
T ss_pred cccccccccccccccCCCChhhhhccccCCccEEECCCCccc-ccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCC
Confidence 111 145666666666665 4445556666666666666666666666666666666
Q ss_pred CEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCC---CcccceeEeecCC
Q 002121 339 QQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGS---GIKNYTLILVGNP 392 (964)
Q Consensus 339 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~---~~~l~~l~l~~Np 392 (964)
+.|+|++|++++..+..+..+++|+.|+|++|+++.++... ...++.|+|.+|.
T Consensus 317 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 373 (844)
T 3j0a_A 317 QVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNA 373 (844)
T ss_dssp CEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCC
T ss_pred CEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCC
Confidence 66666666666666666666666666666666666655432 2335555666655
No 280
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.98 E-value=2.5e-32 Score=326.72 Aligned_cols=320 Identities=19% Similarity=0.177 Sum_probs=247.5
Q ss_pred EEecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCC
Q 002121 59 VTCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAE 138 (964)
Q Consensus 59 v~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 138 (964)
..|....+ .+.++++++ .+|..+. ++|++|+|++| .+.+..|..|.++++|++|+|++|++++..|..|.++++
T Consensus 2 ~~C~~~~~--c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 75 (549)
T 2z81_A 2 LSCDASGV--CDGRSRSFT-SIPSGLT--AAMKSLDLSFN-KITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGS 75 (549)
T ss_dssp CEECTTSE--EECTTSCCS-SCCSCCC--TTCCEEECCSS-CCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred ccCCCCce--EECCCCccc-cccccCC--CCccEEECcCC-ccCccChhhhhcCCcccEEECCCCCcCccChhhcccccc
Confidence 35766555 799999998 6777664 79999999999 799888999999999999999999999888899999999
Q ss_pred ccEEEcccCcccCcCCCcCCCcccccccccccccccc-ccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcc
Q 002121 139 LSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTG-SIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMV 217 (964)
Q Consensus 139 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~ 217 (964)
|++|+|++|++++..|..|+++++|++|+|++|++++ .+| ..+..+++|++|++++|++.+.+|...|..+++
T Consensus 76 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~------~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~ 149 (549)
T 2z81_A 76 LEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVT------SLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTS 149 (549)
T ss_dssp CCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSS------CSCTTCTTCCEEEEEESSSCCEECTTTTTTCCE
T ss_pred CCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchh------hhhhccCCccEEECCCCccccccCHhhhhcccc
Confidence 9999999999998877789999999999999999984 233 467899999999999999777899888999999
Q ss_pred eeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCcc-ccCCCCCCeeeccCccCccCC----CCCCC-------
Q 002121 218 LIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTN-LNNLTNVNELNLAHNDLKGPF----PDLSQ------- 285 (964)
Q Consensus 218 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~----~~l~~------- 285 (964)
|++|++++|++++..|..++.+++|+.|++++|.+. .+|.. +..+++|++|+|++|++++.. +....
T Consensus 150 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L 228 (549)
T 2z81_A 150 LNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKL 228 (549)
T ss_dssp EEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEE
T ss_pred cCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccce
Confidence 999999999999999999988877777777777766 33333 345666777777776666531 00000
Q ss_pred --------------------------------------------------------------------------------
Q 002121 286 -------------------------------------------------------------------------------- 285 (964)
Q Consensus 286 -------------------------------------------------------------------------------- 285 (964)
T Consensus 229 ~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~ 308 (549)
T 2z81_A 229 AFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSL 308 (549)
T ss_dssp EEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHH
T ss_pred eccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhh
Confidence
Q ss_pred CCCCCEEEccCCCCCCCCCCccc-CCCCCCcEEECCCCccccccCh---hccCCCCCCEEEcCCcccccccC--CCCccC
Q 002121 286 MNSLSYVDLSNNSFDPTEAPLWF-STLPSLTTLICEFGSLQGRVPD---KLFSYSQIQQVKLRNNAFNNTLD--MGNAVG 359 (964)
Q Consensus 286 l~~L~~L~Ls~N~l~~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l 359 (964)
+.+|+.|++++|.++ .+|..+ ..+++|+.|+|++|++.+.+|. .+..+++|+.|+|++|++++..+ ..+..+
T Consensus 309 ~~~L~~L~l~~n~l~--~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l 386 (549)
T 2z81_A 309 LEKVKRITVENSKVF--LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTL 386 (549)
T ss_dssp STTCCEEEEESSCCC--CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGC
T ss_pred cccceEEEeccCccc--cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcC
Confidence 124555555566553 334333 5678888888888888776643 36677788888888888776543 446777
Q ss_pred CCCcEEeccCCcceeeccC--CCcccceeEeecCCc
Q 002121 360 PLLQLVDLQNNQISAITLG--SGIKNYTLILVGNPV 393 (964)
Q Consensus 360 ~~L~~L~L~~N~l~~i~~~--~~~~l~~l~l~~Np~ 393 (964)
++|+.|+|++|+++.+|.. ....++.|+|.+|.+
T Consensus 387 ~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l 422 (549)
T 2z81_A 387 KNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGI 422 (549)
T ss_dssp TTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCC
T ss_pred CCCCEEECCCCCCccCChhhcccccccEEECCCCCc
Confidence 7788888888888777643 334567777777774
No 281
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=1.5e-31 Score=305.63 Aligned_cols=306 Identities=18% Similarity=0.200 Sum_probs=262.0
Q ss_pred CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEE
Q 002121 64 SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLA 143 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 143 (964)
.+++.|+|++|.+++..+..|..+++|++|+|++| .+.+..|..|+++++|++|+|++|.++...+..|.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFN-AIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSS-CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCC-CCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 68999999999999888889999999999999999 79988888999999999999999999954444579999999999
Q ss_pred cccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEc
Q 002121 144 LNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLF 223 (964)
Q Consensus 144 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l 223 (964)
|++|.+++..|..|.++++|++|+|++|++++ ++ +..+++|+.|++++|.+++ + .....|++|++
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~--------~~~l~~L~~L~l~~n~l~~-~-----~~~~~L~~L~l 212 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VD--------LSLIPSLFHANVSYNLLST-L-----AIPIAVEELDA 212 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB-CC--------GGGCTTCSEEECCSSCCSE-E-----ECCSSCSEEEC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCc-cc--------cccccccceeecccccccc-c-----CCCCcceEEEC
Confidence 99999998888899999999999999999983 23 5678999999999999973 2 23467999999
Q ss_pred cCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCCCCC
Q 002121 224 DGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSFDPT 302 (964)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ 302 (964)
++|+++.... ...++|+.|++++|.+++. ..+.++++|++|+|++|.+++..+ .+..+++|++|+|++|+++
T Consensus 213 ~~n~l~~~~~---~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-- 285 (390)
T 3o6n_A 213 SHNSINVVRG---PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-- 285 (390)
T ss_dssp CSSCCCEEEC---CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC--
T ss_pred CCCeeeeccc---cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc--
Confidence 9999996533 2358999999999999964 679999999999999999999866 4899999999999999995
Q ss_pred CCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCCCcc
Q 002121 303 EAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIK 382 (964)
Q Consensus 303 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 382 (964)
..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++... +..+++|+.|+|++|+|++-....+..
T Consensus 286 ~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~~~~~~ 361 (390)
T 3o6n_A 286 ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRALFR 361 (390)
T ss_dssp EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHHHTT
T ss_pred ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEEEcCCCCccchhHHHHHH
Confidence 45666788999999999999998 56777889999999999999998763 778899999999999999865433322
Q ss_pred -cceeEeecCC-cccc
Q 002121 383 -NYTLILVGNP-VCTA 396 (964)
Q Consensus 383 -l~~l~l~~Np-~c~~ 396 (964)
.....+.+++ .|.+
T Consensus 362 ~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 362 NVARPAVDDADQHCKI 377 (390)
T ss_dssp TCCTTTBCCCCSCCCT
T ss_pred HHHhhcccccCceecc
Confidence 3334455665 5543
No 282
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=7.4e-32 Score=324.10 Aligned_cols=184 Identities=20% Similarity=0.160 Sum_probs=159.1
Q ss_pred cCCCeeEccCCccccccc-ccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccC-ccccCCCCCCe
Q 002121 191 KNAKHFHFNKNKLSGTIS-EQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVP-TNLNNLTNVNE 268 (964)
Q Consensus 191 ~~L~~L~L~~N~l~g~l~-~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~ 268 (964)
++|+.|++++|++++... ...+..+++|++|++++|++++..+. +..+++|+.|++++|.+++..| ..|.++++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 344445555555442210 23355678999999999999976555 9999999999999999997766 57899999999
Q ss_pred eeccCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcc
Q 002121 269 LNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNA 347 (964)
Q Consensus 269 L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 347 (964)
|+|++|.+++..+. +.++++|++|+|++|.++....|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|+
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 99999999997775 89999999999999999644678889999999999999999999999999999999999999999
Q ss_pred cccccCCCCccCCCCcEEeccCCcceee
Q 002121 348 FNNTLDMGNAVGPLLQLVDLQNNQISAI 375 (964)
Q Consensus 348 l~~~~~~~~~~l~~L~~L~L~~N~l~~i 375 (964)
+++.++..+..+++|+.|+|++|++++-
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 9999999999999999999999999974
No 283
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=5e-31 Score=294.26 Aligned_cols=288 Identities=20% Similarity=0.248 Sum_probs=229.2
Q ss_pred eeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcc
Q 002121 66 VTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALN 145 (964)
Q Consensus 66 v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 145 (964)
++.+++++++++ .+|..+. +.|++|+|++| .+.+..+..|+++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 33 l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n-~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNN-KITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSS-CCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CeEEEecCCCcc-ccCccCC--CCCeEEECCCC-cCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 345556666665 4555543 57888999888 6887777788889999999999999887778888889999999999
Q ss_pred cCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccc-cccccccCCCcceeEEEcc
Q 002121 146 SNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSG-TISEQLFSPDMVLIHVLFD 224 (964)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g-~l~~~~f~~~~~L~~L~l~ 224 (964)
+|+++ .+|..+. ++|++|++++|++++..+ ..+..+++|+.|++++|.++. .+....|..+++|++|+++
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~ 179 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRK------SVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA 179 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCH------HHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECC
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCH------hHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECC
Confidence 99888 5666654 688899999998884333 346778889999999998863 2445667788889999999
Q ss_pred CCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCCCCCC
Q 002121 225 GNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSFDPTE 303 (964)
Q Consensus 225 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~ 303 (964)
+|+++. +|..+. ++|+.|++++|++++..|..|.++++|++|+|++|.+++.++ .+..+++|++|+|++|+++ .
T Consensus 180 ~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~ 254 (330)
T 1xku_A 180 DTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV--K 254 (330)
T ss_dssp SSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS--S
T ss_pred CCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc--c
Confidence 999884 555443 789999999999998888889999999999999999988877 4888899999999999994 6
Q ss_pred CCcccCCCCCCcEEECCCCccccccChhccC------CCCCCEEEcCCccccc--ccCCCCccCCCCcEEeccCCc
Q 002121 304 APLWFSTLPSLTTLICEFGSLQGRVPDKLFS------YSQIQQVKLRNNAFNN--TLDMGNAVGPLLQLVDLQNNQ 371 (964)
Q Consensus 304 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~ 371 (964)
+|..+..+++|++|+|++|+|++..+..|.. .+.|+.|+|++|++.. ..+..|..+..|+.++|++|+
T Consensus 255 lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 255 VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 6777889999999999999999887777754 3788999999999864 566788889999999999985
No 284
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=4.3e-31 Score=296.83 Aligned_cols=301 Identities=23% Similarity=0.277 Sum_probs=258.0
Q ss_pred CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEE
Q 002121 64 SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLA 143 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 143 (964)
.+++.|+++++++.. ++ .+..+++|++|+|++| .+.+..+ +..+++|++|+|++|.++. +| .+..+++|++|+
T Consensus 44 ~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n-~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~ 116 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGN-QITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELY 116 (347)
T ss_dssp TTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSS-CCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred ccccEEEEeCCcccc-ch-hhhhcCCccEEEccCC-ccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEE
Confidence 689999999999974 44 4899999999999999 6776544 9999999999999999984 44 699999999999
Q ss_pred cccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEc
Q 002121 144 LNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLF 223 (964)
Q Consensus 144 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l 223 (964)
|++|.+++. +. +.++++|++|++++|.....++ .+..+++|++|++++|.+.+. +. +..+++|++|++
T Consensus 117 l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-------~~~~l~~L~~L~l~~~~~~~~-~~--~~~l~~L~~L~l 184 (347)
T 4fmz_A 117 LNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-------PLSNMTGLNYLTVTESKVKDV-TP--IANLTDLYSLSL 184 (347)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-------GGTTCTTCCEEECCSSCCCCC-GG--GGGCTTCSEEEC
T ss_pred CcCCcccCc-hh-hccCCceeEEECCCCCCccccc-------chhhCCCCcEEEecCCCcCCc-hh--hccCCCCCEEEc
Confidence 999999954 33 8899999999999997654443 478899999999999999843 33 778889999999
Q ss_pred cCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCC
Q 002121 224 DGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTE 303 (964)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 303 (964)
++|++++..+ +..+++|+.|++++|.+++..+ +..+++|++|+|++|.+++.++ +..+++|++|++++|.++.
T Consensus 185 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-- 257 (347)
T 4fmz_A 185 NYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISD-- 257 (347)
T ss_dssp TTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC--
T ss_pred cCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCC--
Confidence 9999986544 8889999999999999996554 8899999999999999998776 8899999999999999963
Q ss_pred CCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeecc-CCCcc
Q 002121 304 APLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITL-GSGIK 382 (964)
Q Consensus 304 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~-~~~~~ 382 (964)
. ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++.++. .....
T Consensus 258 ~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~ 334 (347)
T 4fmz_A 258 I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSK 334 (347)
T ss_dssp C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTT
T ss_pred C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhc
Confidence 2 4688999999999999999875 468899999999999999999998889999999999999999999865 55666
Q ss_pred cceeEeecCCc
Q 002121 383 NYTLILVGNPV 393 (964)
Q Consensus 383 l~~l~l~~Np~ 393 (964)
+..|++.+|++
T Consensus 335 L~~L~l~~N~i 345 (347)
T 4fmz_A 335 MDSADFANQVI 345 (347)
T ss_dssp CSEESSSCC--
T ss_pred cceeehhhhcc
Confidence 88999999984
No 285
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=5e-32 Score=299.83 Aligned_cols=252 Identities=30% Similarity=0.494 Sum_probs=155.6
Q ss_pred cccEEecccCCCCCC--CCCCCCCCcccchhhcccc-ccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCcccccc
Q 002121 89 ELRSLDLSYNGGLTG--SLSPRIGDLQKLNILILAG-CGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYW 165 (964)
Q Consensus 89 ~L~~L~L~~N~~l~~--~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 165 (964)
+++.|+|++| .+.+ .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++
T Consensus 51 ~l~~L~L~~~-~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 51 RVNNLDLSGL-NLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CEEEEEEECC-CCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred eEEEEECCCC-CccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 4555555555 4555 4555555555555555553 5555555555555555555555555555555555555555555
Q ss_pred ccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCC-CCcE
Q 002121 166 LDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQ-TLEV 244 (964)
Q Consensus 166 L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~ 244 (964)
|+|++|++++.+| ..+..++ +|++|++++|++++.+|..+..++ +|+.
T Consensus 130 L~Ls~N~l~~~~p------~~~~~l~-------------------------~L~~L~L~~N~l~~~~p~~l~~l~~~L~~ 178 (313)
T 1ogq_A 130 LDFSYNALSGTLP------PSISSLP-------------------------NLVGITFDGNRISGAIPDSYGSFSKLFTS 178 (313)
T ss_dssp EECCSSEEESCCC------GGGGGCT-------------------------TCCEEECCSSCCEEECCGGGGCCCTTCCE
T ss_pred EeCCCCccCCcCC------hHHhcCC-------------------------CCCeEECcCCcccCcCCHHHhhhhhcCcE
Confidence 5555555443333 1122222 233333333333334444445554 5555
Q ss_pred EEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCcc
Q 002121 245 LRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSL 324 (964)
Q Consensus 245 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 324 (964)
|+|++|++++.+|..|..++ |++|+|++|.++ ...+..|..+++|+.|+|++|++
T Consensus 179 L~L~~N~l~~~~~~~~~~l~------------------------L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l 233 (313)
T 1ogq_A 179 MTISRNRLTGKIPPTFANLN------------------------LAFVDLSRNMLE-GDASVLFGSDKNTQKIHLAKNSL 233 (313)
T ss_dssp EECCSSEEEEECCGGGGGCC------------------------CSEEECCSSEEE-ECCGGGCCTTSCCSEEECCSSEE
T ss_pred EECcCCeeeccCChHHhCCc------------------------ccEEECcCCccc-CcCCHHHhcCCCCCEEECCCCce
Confidence 55555555555555555443 555555555554 34556677778888888888888
Q ss_pred ccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCccee-eccC-CCcccceeEeecCC-cccccc
Q 002121 325 QGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISA-ITLG-SGIKNYTLILVGNP-VCTATL 398 (964)
Q Consensus 325 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-i~~~-~~~~l~~l~l~~Np-~c~~~l 398 (964)
++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|+|++|++++ +|.. ....+..+++.+|| .|...+
T Consensus 234 ~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 234 AFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp CCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred eeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCC
Confidence 777666 8889999999999999999999999999999999999999995 4433 34457789999999 887543
No 286
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.8e-31 Score=296.49 Aligned_cols=287 Identities=22% Similarity=0.276 Sum_probs=240.4
Q ss_pred eeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcc
Q 002121 66 VTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALN 145 (964)
Q Consensus 66 v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 145 (964)
++.+++++++++ .+|..+. ++|++|+|++| .+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n-~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNN-DISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSS-CCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCC-cCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 455666777776 5666663 68999999999 7888778899999999999999999998888999999999999999
Q ss_pred cCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccc-cccccccCCCcceeEEEcc
Q 002121 146 SNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSG-TISEQLFSPDMVLIHVLFD 224 (964)
Q Consensus 146 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g-~l~~~~f~~~~~L~~L~l~ 224 (964)
+|+++ .+|..+. ++|++|++++|+++ .+|. ..+..+++|+.|++++|.++. .+....|..+ +|++|+++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~-----~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~ 180 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIR-KVPK-----GVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 180 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCC-CCCS-----GGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCC
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccC-ccCH-----hHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECc
Confidence 99999 6666665 78999999999998 3441 357889999999999999963 2445556666 89999999
Q ss_pred CCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCCCCC
Q 002121 225 GNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTE 303 (964)
Q Consensus 225 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~ 303 (964)
+|++++ +|..+. ++|+.|+|++|.+++..+..|.++++|+.|+|++|++++.++. +..+++|++|+|++|+++ .
T Consensus 181 ~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~ 255 (332)
T 2ft3_A 181 EAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS--R 255 (332)
T ss_dssp SSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC--B
T ss_pred CCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe--e
Confidence 999996 565544 7899999999999988889999999999999999999998874 889999999999999995 6
Q ss_pred CCcccCCCCCCcEEECCCCccccccChhccCC------CCCCEEEcCCcccc--cccCCCCccCCCCcEEeccCCc
Q 002121 304 APLWFSTLPSLTTLICEFGSLQGRVPDKLFSY------SQIQQVKLRNNAFN--NTLDMGNAVGPLLQLVDLQNNQ 371 (964)
Q Consensus 304 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~ 371 (964)
+|..+..+++|+.|+|++|+|++..+..|..+ +.|+.|+|++|++. ...+..|..++.|+.|+|++|+
T Consensus 256 lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 256 VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 77779999999999999999998888877653 67999999999998 6778889999999999999985
No 287
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=3.2e-31 Score=319.93 Aligned_cols=287 Identities=19% Similarity=0.215 Sum_probs=256.2
Q ss_pred CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEE
Q 002121 64 SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLA 143 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 143 (964)
.+++.|+|++|.+++..+..|+.+++|++|+|++| .+.+..|..|+++++|++|+|++|.|++..+..|+++++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFN-AIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSS-CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCC-cCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 58999999999999988889999999999999999 79998888999999999999999999966566679999999999
Q ss_pred cccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEc
Q 002121 144 LNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLF 223 (964)
Q Consensus 144 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l 223 (964)
|++|.+++..|..|.++++|++|+|++|.+++ +| +..+++|+.|++++|.+++ +....+|+.|++
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~--------~~~l~~L~~L~l~~n~l~~------l~~~~~L~~L~l 218 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VD--------LSLIPSLFHANVSYNLLST------LAIPIAVEELDA 218 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB-CC--------GGGCTTCSEEECCSSCCSE------EECCTTCSEEEC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCC-cC--------hhhhhhhhhhhcccCcccc------ccCCchhheeec
Confidence 99999999889999999999999999999984 33 5678999999999999984 234467999999
Q ss_pred cCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCCCCC
Q 002121 224 DGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSFDPT 302 (964)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ 302 (964)
++|.++...+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.|++.+| .+..+++|++|+|++|.++
T Consensus 219 s~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-- 291 (597)
T 3oja_B 219 SHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-- 291 (597)
T ss_dssp CSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCC--
T ss_pred cCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCC--
Confidence 999998654432 3689999999999996 4789999999999999999999876 4899999999999999996
Q ss_pred CCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeecc
Q 002121 303 EAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITL 377 (964)
Q Consensus 303 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~ 377 (964)
.+|..+..+++|+.|+|++|.+. .+|..+..+++|+.|+|++|++++.. +..++.|+.|+|++|+|++-..
T Consensus 292 ~l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 292 ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHH
T ss_pred CCCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhH
Confidence 35777788999999999999999 67788899999999999999998763 6778999999999999997653
No 288
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.4e-30 Score=290.64 Aligned_cols=279 Identities=21% Similarity=0.230 Sum_probs=184.6
Q ss_pred CCCccEEecC-----------CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhcccc
Q 002121 54 GSWEGVTCNN-----------SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAG 122 (964)
Q Consensus 54 ~~w~gv~C~~-----------~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~ 122 (964)
|.|+.+.|+. ..++.|+|++|++++..+..|+++++|++|+|++| .+.+..|..|+++++|++|+|++
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINN-KISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS-CCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCC-cCCeeCHHHhcCCCCCCEEECCC
Confidence 4677777752 24666777777777666666777777777777777 56666677777777777777777
Q ss_pred ccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCcccccccccccccccc--ccCcccCCCCccccccCCCeeEccC
Q 002121 123 CGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTG--SIPVSTITSPGLDQLKNAKHFHFNK 200 (964)
Q Consensus 123 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~iP~~~~~~~~l~~l~~L~~L~L~~ 200 (964)
|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|+++. ..| ..+..+++|++|++++
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~------~~~~~l~~L~~L~l~~ 180 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIEN------GAFQGMKKLSYIRIAD 180 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCT------TGGGGCTTCCEEECCS
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcCh------hhccCCCCcCEEECCC
Confidence 7776 5555544 567777777777776655667777777777777777652 222 3566677777777777
Q ss_pred CcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCC
Q 002121 201 NKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPF 280 (964)
Q Consensus 201 N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 280 (964)
|+++ .+|..++ ++|++|++++|++++..|..+..+++|+.|+|++|.+++..+..|..+++|++|+|++|+++.++
T Consensus 181 n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 256 (330)
T 1xku_A 181 TNIT-TIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVP 256 (330)
T ss_dssp SCCC-SCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCC
T ss_pred Cccc-cCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCC
Confidence 7776 4555544 56777777777777666677777777777777777777666666777777777777777777666
Q ss_pred CCCCCCCCCCEEEccCCCCCCCCCCcccCC------CCCCcEEECCCCcccc--ccChhccCCCCCCEEEcCCcc
Q 002121 281 PDLSQMNSLSYVDLSNNSFDPTEAPLWFST------LPSLTTLICEFGSLQG--RVPDKLFSYSQIQQVKLRNNA 347 (964)
Q Consensus 281 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~------l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~ 347 (964)
..+..+++|++|++++|+++ ...+..|.. .+.|+.|++++|.+.. ..|..|..+.+|+.|+|++|+
T Consensus 257 ~~l~~l~~L~~L~l~~N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 257 GGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TTTTTCSSCCEEECCSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred hhhccCCCcCEEECCCCcCC-ccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 66677777777777777776 444444432 3566777777777653 455667777777777777764
No 289
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=6.7e-31 Score=293.44 Aligned_cols=265 Identities=25% Similarity=0.315 Sum_probs=150.7
Q ss_pred cccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccc
Q 002121 89 ELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDL 168 (964)
Q Consensus 89 ~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 168 (964)
+|+.+++++| .+. .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 34 ~l~~l~~~~~-~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDL-GLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSS-CCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCC-Ccc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 4556666655 333 4444442 45666666666666544555666666666666666666555556666666666666
Q ss_pred cccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCc--ccCCcccCCCCCCcEEE
Q 002121 169 ADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLS--GNIPESLGYVQTLEVLR 246 (964)
Q Consensus 169 s~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~ 246 (964)
++|+++ .+|.. +. ++|++|++++|+++ .++...|..+++|++|++++|+++ +..+..+..+ +|+.|+
T Consensus 110 ~~n~l~-~l~~~------~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~ 178 (332)
T 2ft3_A 110 SKNHLV-EIPPN------LP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLR 178 (332)
T ss_dssp CSSCCC-SCCSS------CC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCB
T ss_pred CCCcCC-ccCcc------cc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEE
Confidence 666665 44422 11 45666666666665 455555555666666666666664 2455555555 666666
Q ss_pred cccCcCccccCccccCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccc
Q 002121 247 LDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQ 325 (964)
Q Consensus 247 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 325 (964)
+++|++++ +|..+. ++|++|+|++|.+++.++ .+..+++|++|+|++|+++ ...+..+..+++|+.|+|++|+++
T Consensus 179 l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 179 ISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIR-MIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp CCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCC-CCCTTGGGGCTTCCEEECCSSCCC
T ss_pred CcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCC-cCChhHhhCCCCCCEEECCCCcCe
Confidence 66666663 444333 456666666666665553 3555666666666666665 344445566666666666666665
Q ss_pred cccChhccCCCCCCEEEcCCcccccccCCCCccC------CCCcEEeccCCcce
Q 002121 326 GRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVG------PLLQLVDLQNNQIS 373 (964)
Q Consensus 326 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~L~~N~l~ 373 (964)
.+|..+..+++|+.|+|++|++++..+..|... +.|+.|++++|++.
T Consensus 255 -~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 255 -RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp -BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred -ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 455556666666666666666665555554432 34566666666655
No 290
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=1.9e-30 Score=301.96 Aligned_cols=298 Identities=19% Similarity=0.223 Sum_probs=253.1
Q ss_pred CCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEE
Q 002121 63 NSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFL 142 (964)
Q Consensus 63 ~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 142 (964)
-.+++.|+|++|++++. | .++.+++|++|+|++| .+.+. | ++.+++|++|+|++|.|++. | ++++++|++|
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n-~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L 111 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSN-NITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYL 111 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSS-CCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCC-cCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEE
Confidence 36899999999999975 4 7999999999999999 68774 3 89999999999999999964 4 8999999999
Q ss_pred EcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEE
Q 002121 143 ALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVL 222 (964)
Q Consensus 143 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~ 222 (964)
+|++|++++ +| ++++++|++|++++|++++ +| +..+++|++|++++|+..+.++ +..+++|++|+
T Consensus 112 ~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--------l~~l~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ 176 (457)
T 3bz5_A 112 NCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--------VSHNTQLTELDCHLNKKITKLD---VTPQTQLTTLD 176 (457)
T ss_dssp ECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--------CTTCTTCCEEECTTCSCCCCCC---CTTCTTCCEEE
T ss_pred ECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--------cccCCcCCEEECCCCCcccccc---cccCCcCCEEE
Confidence 999999996 44 8999999999999999995 33 6788999999999997666663 67789999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCC
Q 002121 223 FDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPT 302 (964)
Q Consensus 223 l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ 302 (964)
+++|++++ +| ++.+++|+.|++++|.+++. .+..+++|++|+|++|++++++ +..+++|++|++++|++++
T Consensus 177 ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~- 247 (457)
T 3bz5_A 177 CSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTE- 247 (457)
T ss_dssp CCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSC-
T ss_pred CCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCC-
Confidence 99999997 44 88999999999999999965 4889999999999999999954 8899999999999999984
Q ss_pred CCCcccCCCC-------CCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCC--------CCccCCCCcEEec
Q 002121 303 EAPLWFSTLP-------SLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDM--------GNAVGPLLQLVDL 367 (964)
Q Consensus 303 ~~~~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~--------~~~~l~~L~~L~L 367 (964)
..+..+..+. +|+.|++++|.+.+.+| +..+++|+.|+|++|++.+.+|. .+..+++|+.|+|
T Consensus 248 ~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L 325 (457)
T 3bz5_A 248 LDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYL 325 (457)
T ss_dssp CCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEEC
T ss_pred cCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEEC
Confidence 3444444444 55666777777666666 56789999999999987665553 3667788999999
Q ss_pred cCCcceeeccCCCcccceeEeecCCccc
Q 002121 368 QNNQISAITLGSGIKNYTLILVGNPVCT 395 (964)
Q Consensus 368 ~~N~l~~i~~~~~~~l~~l~l~~Np~c~ 395 (964)
++|+|+.++......++.|++.+|.+-+
T Consensus 326 ~~N~l~~l~l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 326 NNTELTELDVSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp TTCCCSCCCCTTCTTCSEEECCSSCCCB
T ss_pred CCCcccccccccCCcCcEEECCCCCCCC
Confidence 9999999988888889999999998643
No 291
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=1.7e-30 Score=304.17 Aligned_cols=296 Identities=26% Similarity=0.313 Sum_probs=154.1
Q ss_pred CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEE
Q 002121 64 SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLA 143 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 143 (964)
.+++.|+|++|.+++..+ +..+++|++|+|++| .+.+..+ ++++++|++|+|++|.+++. +. +.++++|++|+
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n-~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~ 140 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNN-QIADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLE 140 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS-CCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCC-ccccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEE
Confidence 456666666666665433 666666666666666 4554443 66666666666666666633 22 66666666666
Q ss_pred cccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEc
Q 002121 144 LNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLF 223 (964)
Q Consensus 144 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l 223 (964)
|++|.+++. + .+.++++|++|+++ |.+.+ ...+..+++|+.|++++|.+++ ++ .+..+++|++|++
T Consensus 141 l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~--------~~~~~~l~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~l 206 (466)
T 1o6v_A 141 LSSNTISDI-S-ALSGLTSLQQLSFG-NQVTD--------LKPLANLTTLERLDISSNKVSD-IS--VLAKLTNLESLIA 206 (466)
T ss_dssp EEEEEECCC-G-GGTTCTTCSEEEEE-ESCCC--------CGGGTTCTTCCEEECCSSCCCC-CG--GGGGCTTCSEEEC
T ss_pred CCCCccCCC-h-hhccCCcccEeecC-CcccC--------chhhccCCCCCEEECcCCcCCC-Ch--hhccCCCCCEEEe
Confidence 666666532 2 23333333333332 11111 1124455556666666665552 22 2444555555555
Q ss_pred cCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCC
Q 002121 224 DGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTE 303 (964)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 303 (964)
++|++++..| ++.+++|+.|++++|.+++. ..+..+++|+.|+|++|.+++..+ +..+++|++|++++|.++ .
T Consensus 207 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~-~- 279 (466)
T 1o6v_A 207 TNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQIS-N- 279 (466)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCC-C-
T ss_pred cCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccC-c-
Confidence 5555554433 44455555555555555532 234555555555555555555443 555555555555555553 1
Q ss_pred CCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeec-cCCCcc
Q 002121 304 APLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAIT-LGSGIK 382 (964)
Q Consensus 304 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~-~~~~~~ 382 (964)
.+. +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|+++.++ ......
T Consensus 280 ~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~ 354 (466)
T 1o6v_A 280 ISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLANLTN 354 (466)
T ss_dssp CGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTT
T ss_pred ccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCchhhccCCC
Confidence 121 4555555555555555554433 4455555555555555555443 445555555555555555543 122333
Q ss_pred cceeEeecCC
Q 002121 383 NYTLILVGNP 392 (964)
Q Consensus 383 l~~l~l~~Np 392 (964)
++.|++.+|+
T Consensus 355 L~~L~l~~n~ 364 (466)
T 1o6v_A 355 INWLSAGHNQ 364 (466)
T ss_dssp CCEEECCSSC
T ss_pred CCEEeCCCCc
Confidence 4455555555
No 292
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=4.6e-30 Score=300.50 Aligned_cols=299 Identities=26% Similarity=0.359 Sum_probs=259.3
Q ss_pred CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEE
Q 002121 64 SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLA 143 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 143 (964)
.+++.|++.+++++. +| .+..+++|++|+|++| .+.+..+ +.++++|++|+|++|.+++..| ++++++|++|+
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n-~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNN-QLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSS-CCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCC-ccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 579999999999985 55 4889999999999999 6776655 9999999999999999996554 99999999999
Q ss_pred cccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEc
Q 002121 144 LNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLF 223 (964)
Q Consensus 144 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l 223 (964)
|++|.+++..+ +.++++|++|++++|++++ +| .+..+++|+.|+++ |.+.+. +. +..+++|++|++
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-------~~~~l~~L~~L~l~-~~~~~~-~~--~~~l~~L~~L~l 184 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-------ALSGLTSLQQLSFG-NQVTDL-KP--LANLTTLERLDI 184 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-------GGTTCTTCSEEEEE-ESCCCC-GG--GTTCTTCCEEEC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-------hhccCCcccEeecC-CcccCc-hh--hccCCCCCEEEC
Confidence 99999996543 9999999999999999983 33 47889999999997 555533 22 788899999999
Q ss_pred cCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCC
Q 002121 224 DGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTE 303 (964)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 303 (964)
++|++++. ..+..+++|+.|++++|.+++..| +..+++|++|+|++|.+++. +.+..+++|++|++++|.++ ..
T Consensus 185 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~-~~ 258 (466)
T 1o6v_A 185 SSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQIS-NL 258 (466)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC-CC
T ss_pred cCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccc-cc
Confidence 99999864 348899999999999999997666 78899999999999999975 56889999999999999997 33
Q ss_pred CCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeecc-CCCcc
Q 002121 304 APLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITL-GSGIK 382 (964)
Q Consensus 304 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~-~~~~~ 382 (964)
.+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|+++.++. .....
T Consensus 259 ~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~ 332 (466)
T 1o6v_A 259 AP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 332 (466)
T ss_dssp GG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTT
T ss_pred hh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCcc
Confidence 33 8999999999999999998765 8899999999999999998766 8899999999999999998864 45566
Q ss_pred cceeEeecCCccc
Q 002121 383 NYTLILVGNPVCT 395 (964)
Q Consensus 383 l~~l~l~~Np~c~ 395 (964)
++.|++.+|++.+
T Consensus 333 L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 333 LQRLFFYNNKVSD 345 (466)
T ss_dssp CCEEECCSSCCCC
T ss_pred CCEeECCCCccCC
Confidence 8999999998543
No 293
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=4.3e-30 Score=288.71 Aligned_cols=283 Identities=18% Similarity=0.273 Sum_probs=247.4
Q ss_pred CCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEE
Q 002121 63 NSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFL 142 (964)
Q Consensus 63 ~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 142 (964)
..+++.|++++|.+++..+ +..+++|++|+|++| .+... +.+..+++|++|+|++|.+++ ++. +..+++|++|
T Consensus 65 ~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n-~i~~~--~~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L 137 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTN-KITDI--SALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSL 137 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS-CCCCC--GGGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEE
T ss_pred cCCccEEEccCCccccchh--hhcCCcCCEEEccCC-cccCc--hHHcCCCcCCEEECcCCcccC-chh-hccCCceeEE
Confidence 4689999999999986544 999999999999999 67653 479999999999999999995 444 8999999999
Q ss_pred EcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEE
Q 002121 143 ALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVL 222 (964)
Q Consensus 143 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~ 222 (964)
++++|.....+ ..+..+++|++|++++|.+.+ ++ .+..+++|+.|++++|.+. .++. +..+.+|+.|+
T Consensus 138 ~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~-~~-------~~~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~ 205 (347)
T 4fmz_A 138 NLGANHNLSDL-SPLSNMTGLNYLTVTESKVKD-VT-------PIANLTDLYSLSLNYNQIE-DISP--LASLTSLHYFT 205 (347)
T ss_dssp ECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCC-CG-------GGGGCTTCSEEECTTSCCC-CCGG--GGGCTTCCEEE
T ss_pred ECCCCCCcccc-cchhhCCCCcEEEecCCCcCC-ch-------hhccCCCCCEEEccCCccc-cccc--ccCCCccceee
Confidence 99999776444 459999999999999999983 22 2788999999999999998 4444 77889999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCC
Q 002121 223 FDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPT 302 (964)
Q Consensus 223 l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ 302 (964)
+++|++++..+ +..+++|+.|++++|.+++..+ +..+++|++|+|++|.+++. +.+..+++|++|++++|.++.
T Consensus 206 l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~- 279 (347)
T 4fmz_A 206 AYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQISD- 279 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCC-
T ss_pred cccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccCC-
Confidence 99999997655 8899999999999999995544 99999999999999999986 568899999999999999963
Q ss_pred CCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCccee
Q 002121 303 EAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISA 374 (964)
Q Consensus 303 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (964)
. ..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..+ +..+++|+.|++++|+|+.
T Consensus 280 -~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~~ 347 (347)
T 4fmz_A 280 -I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIKK 347 (347)
T ss_dssp -C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC----
T ss_pred -C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhcccC
Confidence 3 458999999999999999999999999999999999999999998877 8899999999999999863
No 294
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1e-30 Score=294.60 Aligned_cols=288 Identities=20% Similarity=0.200 Sum_probs=209.8
Q ss_pred CCCCCCCCCCCCccEEecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhcccccc
Q 002121 45 TWKNSDDPCGSWEGVTCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCG 124 (964)
Q Consensus 45 ~W~~~~~~C~~w~gv~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~ 124 (964)
.|.....+| .|.|+ | ++++++++ .+|..+. ++|++|+|++| .+.+..+..|.++++|++|+|++|+
T Consensus 22 ~~~~~~~~C-~~~~~-c--------~~~~~~l~-~iP~~~~--~~L~~L~l~~n-~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQASLSC-DRNGI-C--------KGSSGSLN-SIPSGLT--EAVKSLDLSNN-RITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -----CCEE-CTTSE-E--------ECCSTTCS-SCCTTCC--TTCCEEECTTS-CCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCccCCCC-CCCeE-e--------eCCCCCcc-ccccccc--ccCcEEECCCC-cCcccCHHHhccCCCCCEEECCCCc
Confidence 343334445 89887 6 45677777 5676655 58999999999 7887777789999999999999999
Q ss_pred ccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCccc
Q 002121 125 FTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLS 204 (964)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~ 204 (964)
+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++ .+|.. ..+..+++|++|++++|+..
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~----~~~~~l~~L~~L~l~~n~~~ 162 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGET----SLFSHLTKLQILRVGNMDTF 162 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSS----CSCTTCTTCCEEEEEESSSC
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCch----hhhccCCCCcEEECCCCccc
Confidence 99877888999999999999999999655555889999999999999998 45521 35678888999999888533
Q ss_pred ccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-C
Q 002121 205 GTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-L 283 (964)
Q Consensus 205 g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l 283 (964)
+.++...|..+++|++|++++|++++..|..+..+++|+.|++++|.++...+..+..+++|+.|+|++|.+++..+. +
T Consensus 163 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l 242 (353)
T 2z80_A 163 TKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSEL 242 (353)
T ss_dssp CEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC--
T ss_pred cccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccc
Confidence 366666777778888888888888877788888888888888888887743333445577788888888877765432 1
Q ss_pred CCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCcccc----ccChhccCCCCCCEEEcCCcccccccCCCCccC
Q 002121 284 SQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQG----RVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVG 359 (964)
Q Consensus 284 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 359 (964)
.. ....+.++.++|++|.+.+ .+|..+..+++|+.|+|++|+++...+..+..+
T Consensus 243 ~~----------------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l 300 (353)
T 2z80_A 243 ST----------------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRL 300 (353)
T ss_dssp --------------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred cc----------------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcC
Confidence 10 1123344455555555544 367778888888888888888886555556777
Q ss_pred CCCcEEeccCCcce
Q 002121 360 PLLQLVDLQNNQIS 373 (964)
Q Consensus 360 ~~L~~L~L~~N~l~ 373 (964)
++|+.|+|++|+++
T Consensus 301 ~~L~~L~L~~N~~~ 314 (353)
T 2z80_A 301 TSLQKIWLHTNPWD 314 (353)
T ss_dssp TTCCEEECCSSCBC
T ss_pred CCCCEEEeeCCCcc
Confidence 77887777777664
No 295
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.1e-29 Score=295.97 Aligned_cols=262 Identities=19% Similarity=0.181 Sum_probs=135.2
Q ss_pred CccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcc
Q 002121 138 ELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMV 217 (964)
Q Consensus 138 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~ 217 (964)
+|++|+|++|+|++..|..|.++++|++|+|++|++++..| ..|..+++|++|+|++|+++ .++...|..+++
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~------~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~ 148 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEV------GAFNGLASLNTLELFDNWLT-VIPSGAFEYLSK 148 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECT------TTTTTCTTCCEEECCSSCCS-BCCTTTSSSCTT
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcCh------hhccCcccCCEEECCCCcCC-ccChhhhcccCC
Confidence 44444444444444444444444444444444444442222 22333344444444444433 333333444444
Q ss_pred eeEEEccCCcCcccCCcccCCCCCCcEEEccc-CcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccC
Q 002121 218 LIHVLFDGNQLSGNIPESLGYVQTLEVLRLDR-NALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSN 296 (964)
Q Consensus 218 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~ 296 (964)
|++|+|++|+|+...+..|..+++|+.|+|++ |.++...+..|.++++|++|+|++|++++. |.+..+++|++|+|++
T Consensus 149 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~ 227 (452)
T 3zyi_A 149 LRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSG 227 (452)
T ss_dssp CCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTT
T ss_pred CCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcC
Confidence 44444455555444444556666666666665 334433334566666666666666666544 3455555555555555
Q ss_pred CCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeec
Q 002121 297 NSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAIT 376 (964)
Q Consensus 297 N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 376 (964)
|.++ ...+..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|++++..+..+..+++|+
T Consensus 228 N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~------------- 293 (452)
T 3zyi_A 228 NHFP-EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLV------------- 293 (452)
T ss_dssp SCCS-EECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCC-------------
T ss_pred CcCc-ccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCC-------------
Confidence 5554 34444455555555555555555555555555555555555555555544444444444444
Q ss_pred cCCCcccceeEeecCC-cccccccccCccccCCCCCcccccccccCCCCCCCCCCC
Q 002121 377 LGSGIKNYTLILVGNP-VCTATLANTNYCQLQQPTTKAYSTSLANCGGKSCPPEQK 431 (964)
Q Consensus 377 ~~~~~~l~~l~l~~Np-~c~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 431 (964)
.|+|.+|| .|+|.+.++..|..+... ...+....|.+|.-..++.
T Consensus 294 --------~L~L~~Np~~CdC~~~~l~~~l~~~~~--~~~~~~~~C~~P~~l~g~~ 339 (452)
T 3zyi_A 294 --------ELHLHHNPWNCDCDILWLAWWLREYIP--TNSTCCGRCHAPMHMRGRY 339 (452)
T ss_dssp --------EEECCSSCEECSTTTHHHHHHHHHHC-----CCSSCBEEESTTTTTCB
T ss_pred --------EEEccCCCcCCCCCchHHHHHHHHhCc--cCCccCcEeCCchHhccch
Confidence 45566666 699999988888533221 1223346788887666663
No 296
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.5e-29 Score=291.98 Aligned_cols=280 Identities=20% Similarity=0.187 Sum_probs=148.7
Q ss_pred cEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccc
Q 002121 91 RSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLAD 170 (964)
Q Consensus 91 ~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 170 (964)
+.++.+++ .+. .+|..+. .+|+.|+|++|+|++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++
T Consensus 46 ~~v~c~~~-~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 46 SKVICVRK-NLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp CEEECCSC-CCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CEEEeCCC-CcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 45666655 232 3444443 3455555555555544455555555555555555555544445555555555555555
Q ss_pred cccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEccc-
Q 002121 171 NQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDR- 249 (964)
Q Consensus 171 N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~- 249 (964)
|+++ .++...|..+++|++|+|++|+|+...+..|..+++|+.|+|++
T Consensus 122 n~l~-------------------------------~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~ 170 (440)
T 3zyj_A 122 NRLT-------------------------------TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 170 (440)
T ss_dssp SCCS-------------------------------SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC
T ss_pred CcCC-------------------------------eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCC
Confidence 5554 33333333444444444444444444444555666666666665
Q ss_pred CcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccC
Q 002121 250 NALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVP 329 (964)
Q Consensus 250 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 329 (964)
|.++...+..|.++++|++|+|++|+|+.+ |.+..+++|++|+|++|+++ ...+..|.++++|+.|+|++|+|++..+
T Consensus 171 ~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 248 (440)
T 3zyj_A 171 KRLSYISEGAFEGLSNLRYLNLAMCNLREI-PNLTPLIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLWMIQSQIQVIER 248 (440)
T ss_dssp TTCCEECTTTTTTCSSCCEEECTTSCCSSC-CCCTTCSSCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECT
T ss_pred CCcceeCcchhhcccccCeecCCCCcCccc-cccCCCcccCEEECCCCccC-ccChhhhccCccCCEEECCCCceeEECh
Confidence 333333333556666666666666666533 23455555555555555554 3334445555555555555555555555
Q ss_pred hhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCCCcccceeEeecCC-cccccccccCccccCC
Q 002121 330 DKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIKNYTLILVGNP-VCTATLANTNYCQLQQ 408 (964)
Q Consensus 330 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~l~l~~Np-~c~~~l~~~~~~~~~~ 408 (964)
..|.++++|+.|+|++|+++...+..+..+++| +.|+|.+|| .|||.+.++..|....
T Consensus 249 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L---------------------~~L~L~~Np~~CdC~l~~l~~~~~~~ 307 (440)
T 3zyj_A 249 NAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL---------------------ERIHLHHNPWNCNCDILWLSWWIKDM 307 (440)
T ss_dssp TSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC---------------------CEEECCSSCEECSSTTHHHHHHHHTT
T ss_pred hhhcCCCCCCEEECCCCCCCccChhHhccccCC---------------------CEEEcCCCCccCCCCchHHHHHHHhc
Confidence 555555555555555555554444444444444 455566666 6999999998885443
Q ss_pred CCCcccccccccCCCCCCCCCC
Q 002121 409 PTTKAYSTSLANCGGKSCPPEQ 430 (964)
Q Consensus 409 ~~~~~~~~~~~~c~~~~~~~~~ 430 (964)
.. ........|..|+-..++
T Consensus 308 ~~--~~~~~~~~C~~P~~l~g~ 327 (440)
T 3zyj_A 308 AP--SNTACCARCNTPPNLKGR 327 (440)
T ss_dssp SC--SSCSCCCBEEESTTTTTC
T ss_pred cc--cCCccccCCCChhHhcCc
Confidence 22 122334567777666555
No 297
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=5.7e-29 Score=302.58 Aligned_cols=308 Identities=17% Similarity=0.175 Sum_probs=247.4
Q ss_pred CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEE
Q 002121 64 SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLA 143 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 143 (964)
.+++.|+|++|+|++..+.+|.+|++|++|+|++| .+.+..+..|.++++|++|+|++|+|++..+..|+++++|++|+
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N-~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN-PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC-CCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCC-cCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 57899999999999888889999999999999999 78887778899999999999999999977777899999999999
Q ss_pred cccCcccC-cCCCcCCCccccccccccccccccccCcccCC---------------------------------------
Q 002121 144 LNSNNFSG-RIPPSLGKLSQLYWLDLADNQLTGSIPVSTIT--------------------------------------- 183 (964)
Q Consensus 144 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~--------------------------------------- 183 (964)
|++|.+++ .+|..++++++|++|+|++|++++..|.....
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 99999986 45788999999999999999987543321000
Q ss_pred --------------------------------------------------------------------------------
Q 002121 184 -------------------------------------------------------------------------------- 183 (964)
Q Consensus 184 -------------------------------------------------------------------------------- 183 (964)
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence
Q ss_pred ------CCccccccCCCeeEccCCcccccccccc-------------------cCCCcceeEEEccCCcC----------
Q 002121 184 ------SPGLDQLKNAKHFHFNKNKLSGTISEQL-------------------FSPDMVLIHVLFDGNQL---------- 228 (964)
Q Consensus 184 ------~~~l~~l~~L~~L~L~~N~l~g~l~~~~-------------------f~~~~~L~~L~l~~N~l---------- 228 (964)
...+.....|+.|++.+|.+.+ ++... +..+++|+.|++++|.+
T Consensus 315 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 393 (635)
T 4g8a_A 315 SVTIERVKDFSYNFGWQHLELVNCKFGQ-FPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSD 393 (635)
T ss_dssp SCEEEECGGGGSCCCCSEEEEESCEESS-CCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHH
T ss_pred ccccccccccccchhhhhhhcccccccC-cCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccch
Confidence 0000111123444444444331 11000 01233444444444443
Q ss_pred ---------------------------------------cccC-CcccCCCCCCcEEEcccCcCccccCccccCCCCCCe
Q 002121 229 ---------------------------------------SGNI-PESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNE 268 (964)
Q Consensus 229 ---------------------------------------~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 268 (964)
.... +..+..+.+++.++++.|.+++..+..+..++.|+.
T Consensus 394 ~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~ 473 (635)
T 4g8a_A 394 FGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 473 (635)
T ss_dssp HSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred hhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhh
Confidence 3222 234677888999999999999999999999999999
Q ss_pred eeccCccCcc-CCC-CCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCc
Q 002121 269 LNLAHNDLKG-PFP-DLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNN 346 (964)
Q Consensus 269 L~Ls~N~l~~-~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 346 (964)
|+|++|.+.. ..| .+..+++|++|+|++|+|+ ...|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 474 L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~-~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N 552 (635)
T 4g8a_A 474 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 552 (635)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTS
T ss_pred hhhhhcccccccCchhhhhccccCEEECCCCccC-CcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCC
Confidence 9999998544 444 4899999999999999998 777889999999999999999999999999999999999999999
Q ss_pred ccccccCCCCccC-CCCcEEeccCCccee
Q 002121 347 AFNNTLDMGNAVG-PLLQLVDLQNNQISA 374 (964)
Q Consensus 347 ~l~~~~~~~~~~l-~~L~~L~L~~N~l~~ 374 (964)
+|++..+..+..+ ++|+.|+|++|+|++
T Consensus 553 ~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 553 HIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred cCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 9999999999988 579999999999997
No 298
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=9.5e-29 Score=287.60 Aligned_cols=289 Identities=17% Similarity=0.135 Sum_probs=240.6
Q ss_pred CCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEE
Q 002121 63 NSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFL 142 (964)
Q Consensus 63 ~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 142 (964)
..+++.|+|++|++++. | ++.+++|++|+|++| .+.+. + ++++++|++|+|++|.+++ +| ++.+++|++|
T Consensus 63 l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N-~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L 132 (457)
T 3bz5_A 63 LTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSN-KLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYL 132 (457)
T ss_dssp CTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSS-CCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEE
T ss_pred cCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCC-CCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEE
Confidence 46899999999999985 3 999999999999999 68774 3 9999999999999999996 55 8999999999
Q ss_pred EcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEE
Q 002121 143 ALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVL 222 (964)
Q Consensus 143 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~ 222 (964)
+|++|++++. + ++++++|++|++++|+..+.++ +..+++|+.|++++|++++ +| +..+++|+.|+
T Consensus 133 ~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~--------~~~l~~L~~L~ls~n~l~~-l~---l~~l~~L~~L~ 197 (457)
T 3bz5_A 133 NCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD--------VTPQTQLTTLDCSFNKITE-LD---VSQNKLLNRLN 197 (457)
T ss_dssp ECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC--------CTTCTTCCEEECCSSCCCC-CC---CTTCTTCCEEE
T ss_pred ECCCCcccee-c--cccCCcCCEEECCCCCcccccc--------cccCCcCCEEECCCCccce-ec---cccCCCCCEEE
Confidence 9999999974 3 8899999999999997665553 6788999999999999995 65 77889999999
Q ss_pred ccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCC
Q 002121 223 FDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPT 302 (964)
Q Consensus 223 l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ 302 (964)
+++|++++. .++.+++|+.|++++|++++ +| +..+++|+.|+|++|++++.++ ..+++|+.|++++|.+...
T Consensus 198 l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~--~~l~~L~~L~l~~n~L~~L 269 (457)
T 3bz5_A 198 CDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV--STLSKLTTLHCIQTDLLEI 269 (457)
T ss_dssp CCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC--TTCTTCCEEECTTCCCSCC
T ss_pred CcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH--HHCCCCCEEeccCCCCCEE
Confidence 999999975 38899999999999999997 66 8999999999999999999764 4455555554444444311
Q ss_pred C-------CCcccCCCCCCcEEECCCCccccccCh--------hccCCCCCCEEEcCCcccccccCCCCccCCCCcEEec
Q 002121 303 E-------APLWFSTLPSLTTLICEFGSLQGRVPD--------KLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDL 367 (964)
Q Consensus 303 ~-------~~~~~~~l~~L~~L~Ls~N~l~~~~p~--------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 367 (964)
. ....+..+++|+.|+|++|...+.+|. .+.++++|+.|+|++|++++. .+..+++|+.|++
T Consensus 270 ~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l 346 (457)
T 3bz5_A 270 DLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL---DVSHNTKLKSLSC 346 (457)
T ss_dssp CCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC---CCTTCTTCSEEEC
T ss_pred ECCCCccCCcccccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc---ccccCCcCcEEEC
Confidence 1 111256789999999999998777664 356678999999999999995 3889999999999
Q ss_pred cCCcceeeccCCCcccceeEeecCC
Q 002121 368 QNNQISAITLGSGIKNYTLILVGNP 392 (964)
Q Consensus 368 ~~N~l~~i~~~~~~~l~~l~l~~Np 392 (964)
++|+|++++ .+..|.+.+|.
T Consensus 347 ~~N~l~~l~-----~L~~L~l~~n~ 366 (457)
T 3bz5_A 347 VNAHIQDFS-----SVGKIPALNNN 366 (457)
T ss_dssp CSSCCCBCT-----TGGGSSGGGTS
T ss_pred CCCCCCCcc-----ccccccccCCc
Confidence 999999864 34455566665
No 299
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=4.8e-29 Score=289.85 Aligned_cols=294 Identities=20% Similarity=0.256 Sum_probs=153.1
Q ss_pred CCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccc-------------hhhccccccccCcC
Q 002121 63 NSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKL-------------NILILAGCGFTGNI 129 (964)
Q Consensus 63 ~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L-------------~~L~L~~n~l~~~~ 129 (964)
..+++.|++++|++ |.+|.+|+++++|++|+|++| .+.|.+|..++++.+| ++|++++|.+++ +
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n-~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWS-EWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp -------------------------CCHHHHHHHHH-HHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCC-cccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 35677888888888 788888888888888888888 6788888888877664 666666666663 3
Q ss_pred CcccCCCCCccEEEcccCcccCcCCCcCC----------------Cc-cccccccccccccccccCcccCCCCccccccC
Q 002121 130 PDEIGNLAELSFLALNSNNFSGRIPPSLG----------------KL-SQLYWLDLADNQLTGSIPVSTITSPGLDQLKN 192 (964)
Q Consensus 130 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----------------~l-~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~ 192 (964)
|.. .++|++|+|++|.+++ +|..+. .+ ++|++|++++|++++ +| .+..+++
T Consensus 87 p~~---~~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-------~~~~l~~ 154 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-------ELQNSSF 154 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-------CCTTCTT
T ss_pred CCC---cCCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-------ccCCCCC
Confidence 331 1344444444444443 232211 11 456666666666663 44 3667777
Q ss_pred CCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeecc
Q 002121 193 AKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLA 272 (964)
Q Consensus 193 L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 272 (964)
|++|++++|++++ +|.. ..+|++|++++|++++ +| .++.+++|+.|++++|++++ +|... ++|++|+++
T Consensus 155 L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~ 223 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAG 223 (454)
T ss_dssp CCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECC
T ss_pred CCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECc
Confidence 7777777777773 5543 2467777777777775 44 46777777777777777764 33322 356666666
Q ss_pred CccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccc-
Q 002121 273 HNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNT- 351 (964)
Q Consensus 273 ~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~- 351 (964)
+|.++.+ |.+..+++|++|++++|++++ +|. .+++|+.|++++|++++ +|.. +++|+.|+|++|++++.
T Consensus 224 ~n~l~~l-p~~~~l~~L~~L~l~~N~l~~--l~~---~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~ 293 (454)
T 1jl5_A 224 NNILEEL-PELQNLPFLTTIYADNNLLKT--LPD---LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLS 293 (454)
T ss_dssp SSCCSSC-CCCTTCTTCCEEECCSSCCSS--CCS---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEES
T ss_pred CCcCCcc-cccCCCCCCCEEECCCCcCCc--ccc---cccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCccc
Confidence 6666633 346666666666666666642 222 12445555555555543 2221 13444444444444331
Q ss_pred -cCCC-------------CccC-CCCcEEeccCCcceeeccCCCcccceeEeecCCc
Q 002121 352 -LDMG-------------NAVG-PLLQLVDLQNNQISAITLGSGIKNYTLILVGNPV 393 (964)
Q Consensus 352 -~~~~-------------~~~l-~~L~~L~L~~N~l~~i~~~~~~~l~~l~l~~Np~ 393 (964)
.+.. +..+ ++|+.|+|++|+++.++.. ...++.|++.+|.+
T Consensus 294 ~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~lp~~-~~~L~~L~L~~N~l 349 (454)
T 1jl5_A 294 ELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL-PPRLERLIASFNHL 349 (454)
T ss_dssp CCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSCCCCC-CTTCCEEECCSSCC
T ss_pred CcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccccccc-CCcCCEEECCCCcc
Confidence 1111 1112 3677777777777765543 34566777777764
No 300
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.3e-29 Score=279.44 Aligned_cols=249 Identities=21% Similarity=0.274 Sum_probs=131.7
Q ss_pred CCCccEEecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCc--CCc
Q 002121 54 GSWEGVTCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGN--IPD 131 (964)
Q Consensus 54 ~~w~gv~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--~p~ 131 (964)
|.|.+|.|+..+++ .+|..+. ++|++|+|++| .+....+..|.++++|++|+|++|.++.. .|.
T Consensus 7 C~~~~l~c~~~~l~-----------~ip~~~~--~~l~~L~L~~n-~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 72 (306)
T 2z66_A 7 CSGTEIRCNSKGLT-----------SVPTGIP--SSATRLELESN-KLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQ 72 (306)
T ss_dssp EETTEEECCSSCCS-----------SCCSCCC--TTCCEEECCSS-CCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEH
T ss_pred eCCCEEEcCCCCcc-----------cCCCCCC--CCCCEEECCCC-ccCccCHhHhhccccCCEEECCCCccCcccCccc
Confidence 68888888654433 3343332 57888888888 56644444467777777777777777622 355
Q ss_pred ccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccc
Q 002121 132 EIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQL 211 (964)
Q Consensus 132 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~ 211 (964)
.+..+++|++|+|++|.++ .+|..+.++++|++|+|++|++++ +| +...
T Consensus 73 ~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~-~~-----------------------------~~~~ 121 (306)
T 2z66_A 73 SDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ-MS-----------------------------EFSV 121 (306)
T ss_dssp HHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEES-ST-----------------------------TTTT
T ss_pred ccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccc-cc-----------------------------cchh
Confidence 5666677777777777766 345556666666666666666652 11 1122
Q ss_pred cCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCcc-ccCccccCCCCCCeeeccCccCccCCCC-CCCCCCC
Q 002121 212 FSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTG-KVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSL 289 (964)
Q Consensus 212 f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L 289 (964)
|..+++|++|++++|++++..+..+..+++|+.|+|++|.+++ .+|..|..+++|++|+|++|.+++.++. +..+++|
T Consensus 122 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 201 (306)
T 2z66_A 122 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 201 (306)
T ss_dssp TTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred hhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCC
Confidence 2333334444444444444444555555555555555555554 3455555555555555555555554332 4444444
Q ss_pred CEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCC-CCCEEEcCCccc
Q 002121 290 SYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYS-QIQQVKLRNNAF 348 (964)
Q Consensus 290 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l 348 (964)
++|+|++|+++ ...+..+..+++|+.|+|++|++++..|..+..++ +|+.|+|++|++
T Consensus 202 ~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~ 260 (306)
T 2z66_A 202 QVLNMSHNNFF-SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260 (306)
T ss_dssp CEEECTTSCCS-BCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCE
T ss_pred CEEECCCCccC-ccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCe
Confidence 44444444443 22233344444444444444444444444444432 344444444443
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3.4e-29 Score=276.21 Aligned_cols=280 Identities=19% Similarity=0.179 Sum_probs=189.8
Q ss_pred hhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCcccccccccccccccc--ccCcccCCCCccccccCC
Q 002121 116 NILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTG--SIPVSTITSPGLDQLKNA 193 (964)
Q Consensus 116 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~iP~~~~~~~~l~~l~~L 193 (964)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++. .+| ..+..+++|
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~------~~~~~~~~L 80 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCS------QSDFGTTSL 80 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEE------HHHHSCSCC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcc------ccccccccc
Confidence 35566666666 5565443 577777888777774444456777778888888777762 122 234456777
Q ss_pred CeeEccCCcccccccccccCCCcceeEEEccCCcCcccCC-cccCCCCCCcEEEcccCcCccccCccccCCCCCCeeecc
Q 002121 194 KHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIP-ESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLA 272 (964)
Q Consensus 194 ~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 272 (964)
++|++++|.++ .+|.. |..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..+..|.++++|++|+|+
T Consensus 81 ~~L~Ls~n~i~-~l~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 158 (306)
T 2z66_A 81 KYLDLSFNGVI-TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA 158 (306)
T ss_dssp CEEECCSCSEE-EEEEE-EETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECT
T ss_pred CEEECCCCccc-cChhh-cCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECC
Confidence 77777777776 45544 5556777777777777776554 567788888888888888887777788888888888888
Q ss_pred CccCcc--CCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCccccc
Q 002121 273 HNDLKG--PFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNN 350 (964)
Q Consensus 273 ~N~l~~--~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 350 (964)
+|.+++ .+..+..+++|++|+|++|.++ ...+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++
T Consensus 159 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 237 (306)
T 2z66_A 159 GNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 237 (306)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCB
T ss_pred CCccccccchhHHhhCcCCCEEECCCCCcC-CcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcc
Confidence 888876 3445777778888888888776 5556677777777777777777777777677777777777777777777
Q ss_pred ccCCCCccCC-CCcEEeccCCcceeeccCCCcccceeEeecCCcccccccccCccccCCCCCcccccccccCCCCCCCC
Q 002121 351 TLDMGNAVGP-LLQLVDLQNNQISAITLGSGIKNYTLILVGNPVCTATLANTNYCQLQQPTTKAYSTSLANCGGKSCPP 428 (964)
Q Consensus 351 ~~~~~~~~l~-~L~~L~L~~N~l~~i~~~~~~~l~~l~l~~Np~c~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 428 (964)
..+..+..++ +|+.|+|++|+| .|+|.+.....|...... .........|..|+-..
T Consensus 238 ~~~~~~~~~~~~L~~L~L~~N~~--------------------~~~c~~~~~~~~l~~~~~-~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 238 SKKQELQHFPSSLAFLNLTQNDF--------------------ACTCEHQSFLQWIKDQRQ-LLVEVERMECATPSDKQ 295 (306)
T ss_dssp CSSSSCCCCCTTCCEEECTTCCE--------------------ECSGGGHHHHHHHHHTGG-GBSCGGGCBEEESGGGT
T ss_pred cCHHHHHhhhccCCEEEccCCCe--------------------ecccChHHHHHHHHhhhh-hhccccccccCCchhhC
Confidence 7777666664 566666665555 467776666566322221 12223445566554333
No 302
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.2e-28 Score=266.87 Aligned_cols=264 Identities=19% Similarity=0.221 Sum_probs=189.1
Q ss_pred ccEEecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCC
Q 002121 57 EGVTCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNL 136 (964)
Q Consensus 57 ~gv~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 136 (964)
.+..|.....+.++.++++++ .+|..+ .++|++|+|++| .+.+..+..|..+++|++|+|++|.+++..|..|..+
T Consensus 4 ~~C~C~~~~~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n-~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 79 (285)
T 1ozn_A 4 GACVCYNEPKVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGN-RISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGL 79 (285)
T ss_dssp TTCEEECSSSCEEECCSSCCS-SCCTTC--CTTCSEEECTTS-CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCceECCCCCeEEEcCcCCcc-cCCcCC--CCCceEEEeeCC-cCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCc
Confidence 355677666678889998887 456544 578999999999 7888777889999999999999999998778899999
Q ss_pred CCccEEEcccCc-ccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCC
Q 002121 137 AELSFLALNSNN-FSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPD 215 (964)
Q Consensus 137 ~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~ 215 (964)
++|++|+|++|. ++...|..|.++++|++|+|++|++++..| ..+..+++|++|++++|+++ .++...|..+
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l 152 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGP------GLFRGLAALQYLYLQDNALQ-ALPDDTFRDL 152 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCT------TTTTTCTTCCEEECCSSCCC-CCCTTTTTTC
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECH------hHhhCCcCCCEEECCCCccc-ccCHhHhccC
Confidence 999999999997 876668889999999999999999985444 45677788888888888877 5555566666
Q ss_pred cceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEc
Q 002121 216 MVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDL 294 (964)
Q Consensus 216 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~L 294 (964)
++|++|++++|++++..+..+..+++|+.|+|++|.+++..|..|.++++|+.|+|++|++++.++. +..+++|++|+|
T Consensus 153 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 232 (285)
T 1ozn_A 153 GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRL 232 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEec
Confidence 6777777777777665555666677777777777777666666666666777777777766665543 566666666666
Q ss_pred cCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhcc
Q 002121 295 SNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLF 333 (964)
Q Consensus 295 s~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 333 (964)
++|++.+.....++ ...++.+..+.+.+.+..|..+.
T Consensus 233 ~~N~~~c~~~~~~~--~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 233 NDNPWVCDCRARPL--WAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp CSSCEECSGGGHHH--HHHHHHCCSEECCCBEEESGGGT
T ss_pred cCCCccCCCCcHHH--HHHHHhcccccCccccCCchHhC
Confidence 66666432221111 12233334445555555555443
No 303
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.8e-27 Score=274.81 Aligned_cols=244 Identities=21% Similarity=0.219 Sum_probs=171.4
Q ss_pred EEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccC
Q 002121 68 ALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSN 147 (964)
Q Consensus 68 ~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 147 (964)
.++..+.+++ .+|..+. +.|+.|+|++| .+.+..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n-~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHEN-QIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSC-CCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCC-cCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 4455555665 5666554 68999999999 799888899999999999999999999888889999999999999999
Q ss_pred cccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCc
Q 002121 148 NFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQ 227 (964)
Q Consensus 148 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~ 227 (964)
+|+...+..|.++++|++|+|++|+++ .+|. ..+..+++|+.|+|++|+..+.++...|..+.+|++|++++|+
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~-----~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~ 196 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIE-SIPS-----YAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCN 196 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCC-EECT-----TTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSC
T ss_pred cCCeeCHhHhhccccCceeeCCCCccc-ccCH-----HHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCc
Confidence 999777778999999999999999998 3442 4577888888888888655556666666666667777777766
Q ss_pred CcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCc
Q 002121 228 LSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPL 306 (964)
Q Consensus 228 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~ 306 (964)
++. +| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+. +.++++|++|+|++|+++ ...+.
T Consensus 197 l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~ 273 (440)
T 3zyj_A 197 LRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHD 273 (440)
T ss_dssp CSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC-CCCTT
T ss_pred Ccc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC-ccChh
Confidence 663 33 255666666666666666655566666666666666666666655443 444444444444444444 33333
Q ss_pred ccCCCCCCcEEECCCCcc
Q 002121 307 WFSTLPSLTTLICEFGSL 324 (964)
Q Consensus 307 ~~~~l~~L~~L~Ls~N~l 324 (964)
.|..+++|+.|+|++|.+
T Consensus 274 ~~~~l~~L~~L~L~~Np~ 291 (440)
T 3zyj_A 274 LFTPLHHLERIHLHHNPW 291 (440)
T ss_dssp TTSSCTTCCEEECCSSCE
T ss_pred HhccccCCCEEEcCCCCc
Confidence 334444444444444433
No 304
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=6.7e-28 Score=268.36 Aligned_cols=238 Identities=20% Similarity=0.259 Sum_probs=200.5
Q ss_pred CCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccc
Q 002121 87 LTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWL 166 (964)
Q Consensus 87 l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 166 (964)
.+.++.|+|++| .+. .+|+.++++++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..|+++++|++|
T Consensus 80 ~~~l~~L~L~~n-~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 80 QPGRVALELRSV-PLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp STTCCEEEEESS-CCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred ccceeEEEccCC-Cch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 467788888887 555 67777777888888888888877 77777777888888888888877 667777777777777
Q ss_pred cccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEE
Q 002121 167 DLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLR 246 (964)
Q Consensus 167 ~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 246 (964)
+|++|++.+.+|.. +.. + ..+..+..+++|++|+
T Consensus 156 ~L~~n~~~~~~p~~------~~~------------------------------------~----~~~~~~~~l~~L~~L~ 189 (328)
T 4fcg_A 156 SIRACPELTELPEP------LAS------------------------------------T----DASGEHQGLVNLQSLR 189 (328)
T ss_dssp EEEEETTCCCCCSC------SEE------------------------------------E----C-CCCEEESTTCCEEE
T ss_pred ECCCCCCccccChh------Hhh------------------------------------c----cchhhhccCCCCCEEE
Confidence 77777776666622 100 0 1233467789999999
Q ss_pred cccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCcccc
Q 002121 247 LDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQG 326 (964)
Q Consensus 247 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 326 (964)
|++|+|+ .+|..|.++++|++|+|++|.+++.++.+..+++|++|+|++|.+. ...|..+..+++|+.|+|++|++.+
T Consensus 190 L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~-~~~p~~~~~l~~L~~L~L~~n~~~~ 267 (328)
T 4fcg_A 190 LEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTAL-RNYPPIFGGRAPLKRLILKDCSNLL 267 (328)
T ss_dssp EEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTC-CBCCCCTTCCCCCCEEECTTCTTCC
T ss_pred CcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcch-hhhHHHhcCCCCCCEEECCCCCchh
Confidence 9999999 8899999999999999999999998888999999999999999998 6778889999999999999999999
Q ss_pred ccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeec
Q 002121 327 RVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAIT 376 (964)
Q Consensus 327 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 376 (964)
.+|..+..+++|+.|+|++|++.+.+|..+..+++|+.+++..|.+..++
T Consensus 268 ~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l~ 317 (328)
T 4fcg_A 268 TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLD 317 (328)
T ss_dssp BCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC--
T ss_pred hcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHHHh
Confidence 99999999999999999999999999999999999999999999887754
No 305
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=2.2e-29 Score=299.79 Aligned_cols=185 Identities=18% Similarity=0.124 Sum_probs=130.9
Q ss_pred eeecCCcEEEEEEE-ecCCcEEEEEEecCCCc----------chhHHHHHHHHHHHhc-CCCCccceeEEEEeeCceEEE
Q 002121 634 EIGSGGYGKVYRGM-LSDGQVVAIKRAQQGSM----------QGGLEFKTEIELLSRV-HHKNLVGLVGFCFEQGEQMLV 701 (964)
Q Consensus 634 ~lG~G~fg~Vy~~~-~~~g~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 701 (964)
..+.|++|.+..++ .-.|+.+|||++..... ...++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45667777666655 33589999999875321 1234699999999999 799999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCC
Q 002121 702 YEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDS 781 (964)
Q Consensus 702 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~ 781 (964)
|||++||+|.++|...+ +++.. +|+.||+.||+|+|+++ ||||||||+|||++++|++||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999998754 45543 58899999999999999 999999999999999999999999999876543
Q ss_pred CCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCC
Q 002121 782 SKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQP 829 (964)
Q Consensus 782 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p 829 (964)
. ......+||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 393 ~--~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 C--SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred C--ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 2 22345679999999999864 567889999999998887665443
No 306
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.1e-27 Score=284.46 Aligned_cols=281 Identities=24% Similarity=0.269 Sum_probs=233.1
Q ss_pred CCCCCCCCCCCCccE--------EecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccch
Q 002121 45 TWKNSDDPCGSWEGV--------TCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLN 116 (964)
Q Consensus 45 ~W~~~~~~C~~w~gv--------~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~ 116 (964)
.|....++| .|+|. .|....++.|++++++++ .+|..+. ++|++|+|++| .+. .+|. .+++|+
T Consensus 14 ~W~~~~~~~-~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N-~l~-~lp~---~l~~L~ 84 (622)
T 3g06_A 14 AWRRAAPAE-ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDN-NLT-SLPA---LPPELR 84 (622)
T ss_dssp HHHHTCCGG-GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSC-CCS-CCCC---CCTTCC
T ss_pred HHHhcCCcc-hhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCC-CCC-CCCC---cCCCCC
Confidence 465444554 88663 444568999999999999 7888776 89999999999 676 4565 578999
Q ss_pred hhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCee
Q 002121 117 ILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHF 196 (964)
Q Consensus 117 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L 196 (964)
+|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+++ .+|. .+++|++|
T Consensus 85 ~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~---------~l~~L~~L 146 (622)
T 3g06_A 85 TLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPV---------LPPGLQEL 146 (622)
T ss_dssp EEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCC---------CCTTCCEE
T ss_pred EEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCC---------CCCCCCEE
Confidence 9999999999 5776 78999999999999995 555 5689999999999999 4662 24899999
Q ss_pred EccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccC
Q 002121 197 HFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDL 276 (964)
Q Consensus 197 ~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 276 (964)
+|++|+++ .+|. ...+|+.|++++|+|++ +| ..+++|+.|+|++|.|++ +|.. +++|+.|++++|.|
T Consensus 147 ~Ls~N~l~-~l~~----~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l 213 (622)
T 3g06_A 147 SVSDNQLA-SLPA----LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRL 213 (622)
T ss_dssp ECCSSCCS-CCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred ECcCCcCC-CcCC----ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcc
Confidence 99999998 4554 34689999999999996 55 557899999999999994 5543 47899999999999
Q ss_pred ccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCC
Q 002121 277 KGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGN 356 (964)
Q Consensus 277 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 356 (964)
+.++.. +++|++|+|++|.|++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..+
T Consensus 214 ~~l~~~---~~~L~~L~Ls~N~L~~--lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l 280 (622)
T 3g06_A 214 TSLPAL---PSGLKELIVSGNRLTS--LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESL 280 (622)
T ss_dssp SSCCCC---CTTCCEEECCSSCCSC--CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGG
T ss_pred cccCCC---CCCCCEEEccCCccCc--CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHH
Confidence 977653 4789999999999963 44 567899999999999995 454 6789999999999999 557789
Q ss_pred ccCCCCcEEeccCCcceeeccC
Q 002121 357 AVGPLLQLVDLQNNQISAITLG 378 (964)
Q Consensus 357 ~~l~~L~~L~L~~N~l~~i~~~ 378 (964)
..+++|+.|+|++|+|++..+.
T Consensus 281 ~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 281 IHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp GGSCTTCEEECCSCCCCHHHHH
T ss_pred hhccccCEEEecCCCCCCcCHH
Confidence 9999999999999999986544
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=5.5e-27 Score=273.29 Aligned_cols=244 Identities=20% Similarity=0.211 Sum_probs=176.0
Q ss_pred EEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCc
Q 002121 69 LGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNN 148 (964)
Q Consensus 69 L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 148 (964)
++..+.+++ .+|..+. ++|++|+|++| .+.+..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+
T Consensus 59 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n-~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 59 VVCTRRGLS-EVPQGIP--SNTRYLNLMEN-NIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EECCSSCCS-SCCSCCC--TTCSEEECCSS-CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcC-ccCCCCC--CCccEEECcCC-cCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 334444554 4555443 68899999999 7888888999999999999999999998888899999999999999999
Q ss_pred ccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcC
Q 002121 149 FSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQL 228 (964)
Q Consensus 149 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l 228 (964)
|++..+..|.++++|++|+|++|+++ .+|. ..+..+++|+.|++++|+..+.++...|..+.+|++|++++|++
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~-----~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 208 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIE-SIPS-----YAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI 208 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCC-EECT-----TTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCccChhhhcccCCCCEEECCCCCcc-eeCH-----hHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcc
Confidence 99777777999999999999999998 4442 35778888888888886555577777777777777777777777
Q ss_pred cccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcc
Q 002121 229 SGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLW 307 (964)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~ 307 (964)
++. | .+..+++|+.|+|++|.|++..|..|.++++|+.|+|++|++++..+. +..+++|++|+|++|+|+ ...+..
T Consensus 209 ~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~ 285 (452)
T 3zyi_A 209 KDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS-SLPHDL 285 (452)
T ss_dssp SSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-CCCTTS
T ss_pred ccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCC-ccChHH
Confidence 743 3 366677777777777777766677777777777777777777665543 555555555555555554 333334
Q ss_pred cCCCCCCcEEECCCCccc
Q 002121 308 FSTLPSLTTLICEFGSLQ 325 (964)
Q Consensus 308 ~~~l~~L~~L~Ls~N~l~ 325 (964)
|..+++|+.|+|++|.+.
T Consensus 286 ~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 286 FTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp STTCTTCCEEECCSSCEE
T ss_pred hccccCCCEEEccCCCcC
Confidence 444444444444444433
No 308
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.4e-29 Score=276.97 Aligned_cols=249 Identities=20% Similarity=0.230 Sum_probs=146.6
Q ss_pred cCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccc-cCcCCcccC-------CCCCccEEEcccCcccCcCCC
Q 002121 84 IGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGF-TGNIPDEIG-------NLAELSFLALNSNNFSGRIPP 155 (964)
Q Consensus 84 l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~ 155 (964)
++..++|+.|+|++| .+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|.
T Consensus 39 ~~~~~~L~~l~l~~n-~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVD-TE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCC-TT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeeccc-cc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 456677888888888 56 667666554 88888888888 445776665 788888888888888888888
Q ss_pred cC--CCccccccccccccccccccCcccCCCCccccc-----cCCCeeEccCCcccccccccccCCCcceeEEEccCCcC
Q 002121 156 SL--GKLSQLYWLDLADNQLTGSIPVSTITSPGLDQL-----KNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQL 228 (964)
Q Consensus 156 ~~--~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l-----~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l 228 (964)
.+ ..+++|++|+|++|++++. | ..+..+ ++|++|+|++|+++
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~------~~~~~l~~~~~~~L~~L~L~~N~l~------------------------ 162 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-D------AWLAELQQWLKPGLKVLSIAQAHSL------------------------ 162 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-S------SHHHHHHTTCCTTCCEEEEESCSCC------------------------
T ss_pred HHHHhcCCCccEEEccCCCCcch-h------HHHHHHHHhhcCCCcEEEeeCCCCc------------------------
Confidence 76 7888888888888888854 5 334444 56666666666655
Q ss_pred cccCCcccCCCCCCcEEEcccCcCccc--cCccc--cCCCCCCeeeccCccCccCCC---C-CCCCCCCCEEEccCCCCC
Q 002121 229 SGNIPESLGYVQTLEVLRLDRNALTGK--VPTNL--NNLTNVNELNLAHNDLKGPFP---D-LSQMNSLSYVDLSNNSFD 300 (964)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~~~~~---~-l~~l~~L~~L~Ls~N~l~ 300 (964)
+..|..|+.+++|++|+|++|++.+. .+..+ .++++|++|+|++|+|++... . +..+++|++|+|++|+++
T Consensus 163 -~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 241 (312)
T 1wwl_A 163 -NFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLR 241 (312)
T ss_dssp -CCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCC
T ss_pred -cchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCC
Confidence 33334444444444444444444432 12222 444444445554444442211 1 233444555555555554
Q ss_pred CCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCccee
Q 002121 301 PTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISA 374 (964)
Q Consensus 301 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (964)
+......+..+++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 242 ~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 242 DAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 2221233444555555555555555 4444443 5566666666666555 22 5566666666666666654
No 309
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=4.9e-27 Score=272.95 Aligned_cols=272 Identities=21% Similarity=0.229 Sum_probs=195.0
Q ss_pred CCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCc-------------cEEEcccCc
Q 002121 82 GDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAEL-------------SFLALNSNN 148 (964)
Q Consensus 82 ~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~Ls~N~ 148 (964)
+.-...++|++|++++| .+ |.+|++++++++|++|++++|.++|.+|..++++++| ++|++++|.
T Consensus 5 p~~~~~~~L~~L~l~~n-~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~ 82 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSS-NL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLG 82 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSC
T ss_pred ccccccccchhhhcccC-ch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCc
Confidence 33445789999999999 67 8999999999999999999999999999999999875 999999999
Q ss_pred ccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcC
Q 002121 149 FSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQL 228 (964)
Q Consensus 149 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l 228 (964)
+++ +|.. .++|++|++++|++++ +|. .+++|++|++++|++++ ++.. .++|++|++++|++
T Consensus 83 l~~-lp~~---~~~L~~L~l~~n~l~~-lp~---------~~~~L~~L~l~~n~l~~-l~~~----~~~L~~L~L~~n~l 143 (454)
T 1jl5_A 83 LSS-LPEL---PPHLESLVASCNSLTE-LPE---------LPQSLKSLLVDNNNLKA-LSDL----PPLLEYLGVSNNQL 143 (454)
T ss_dssp CSC-CCSC---CTTCSEEECCSSCCSS-CCC---------CCTTCCEEECCSSCCSC-CCSC----CTTCCEEECCSSCC
T ss_pred ccc-CCCC---cCCCCEEEccCCcCCc-ccc---------ccCCCcEEECCCCccCc-ccCC----CCCCCEEECcCCCC
Confidence 995 4542 3789999999999995 772 23788999999999883 4432 26899999999999
Q ss_pred cccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCccc
Q 002121 229 SGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWF 308 (964)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 308 (964)
++ +| .++.+++|++|++++|++++ +|..+ ++|++|+|++|++++. |.+.++++|++|++++|.+++ +|..
T Consensus 144 ~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~~~~~l~~L~~L~l~~N~l~~--l~~~- 213 (454)
T 1jl5_A 144 EK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-PELQNLPFLTAIYADNNSLKK--LPDL- 213 (454)
T ss_dssp SS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSSCCSS--CCCC-
T ss_pred CC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-ccccCCCCCCEEECCCCcCCc--CCCC-
Confidence 86 66 58889999999999999985 66543 5889999999999885 478889999999999999863 3332
Q ss_pred CCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCCCcccceeEe
Q 002121 309 STLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIKNYTLIL 388 (964)
Q Consensus 309 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~l~l 388 (964)
.++|+.|++++|+++ .+| .+..+++|+.|++++|++++... .+++|+.|++++|+++.++.. ...++.|++
T Consensus 214 --~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~l~~~-~~~L~~L~l 284 (454)
T 1jl5_A 214 --PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTDLPEL-PQSLTFLDV 284 (454)
T ss_dssp --CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSCCCCC-CTTCCEEEC
T ss_pred --cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCcccccCcc-cCcCCEEEC
Confidence 258889999999888 566 48888899999999998886432 247788888888888887643 355778888
Q ss_pred ecCCc
Q 002121 389 VGNPV 393 (964)
Q Consensus 389 ~~Np~ 393 (964)
++|.+
T Consensus 285 s~N~l 289 (454)
T 1jl5_A 285 SENIF 289 (454)
T ss_dssp CSSCC
T ss_pred cCCcc
Confidence 88874
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=7.5e-29 Score=274.27 Aligned_cols=264 Identities=18% Similarity=0.215 Sum_probs=188.0
Q ss_pred CCCCCCCCCCCCCcc--EEecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCC-CCCCCCCCC-------Ccc
Q 002121 44 PTWKNSDDPCGSWEG--VTCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGL-TGSLSPRIG-------DLQ 113 (964)
Q Consensus 44 ~~W~~~~~~C~~w~g--v~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l-~~~~p~~l~-------~l~ 113 (964)
.+|.....|+ .+.. +.|...+++.|++++|.+ .+|..+... |+.|+|++| .+ .+.+|..+. +++
T Consensus 22 ~~~~~~~~c~-~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n-~l~~~~~~~~~~~~~~~~~~l~ 95 (312)
T 1wwl_A 22 PDWSSAFNCL-GAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRL-TVRAARIPSRILFGALRVLGIS 95 (312)
T ss_dssp CCGGGGGGSS-SCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEE-EEEEEECBHHHHHHHHHHHTTS
T ss_pred cchHHHhhhh-ccccEEEEccCCCceeEeeccccc--ccHHHHHHH--Hhhcccccc-cccCCCcCHHHHHHHHHhcCcC
Confidence 5676444443 4544 567777899999999999 777766655 999999999 66 556776666 789
Q ss_pred cchhhccccccccCcCCccc--CCCCCccEEEcccCcccCcCCCcCCCc-----cccccccccccccccccCcccCCCCc
Q 002121 114 KLNILILAGCGFTGNIPDEI--GNLAELSFLALNSNNFSGRIPPSLGKL-----SQLYWLDLADNQLTGSIPVSTITSPG 186 (964)
Q Consensus 114 ~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~g~iP~~~~~~~~ 186 (964)
+|++|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..| ..
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~------~~ 168 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSC------EQ 168 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCT------TT
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchH------HH
Confidence 99999999999999999987 8999999999999999977 8888888 899999999999996554 45
Q ss_pred cccccCCCeeEccCCcccccc--c-ccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCcc---ccCccc
Q 002121 187 LDQLKNAKHFHFNKNKLSGTI--S-EQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTG---KVPTNL 260 (964)
Q Consensus 187 l~~l~~L~~L~L~~N~l~g~l--~-~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p~~~ 260 (964)
+..+++|++|+|++|++.+.+ + ...| ..+++|++|+|++|+|++ .....+
T Consensus 169 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~~ 224 (312)
T 1wwl_A 169 VRVFPALSTLDLSDNPELGERGLISALCP------------------------LKFPTLQVLALRNAGMETPSGVCSALA 224 (312)
T ss_dssp CCCCSSCCEEECCSCTTCHHHHHHHHSCT------------------------TSCTTCCEEECTTSCCCCHHHHHHHHH
T ss_pred hccCCCCCEEECCCCCcCcchHHHHHHHh------------------------ccCCCCCEEECCCCcCcchHHHHHHHH
Confidence 778889999999999876542 1 1112 444555555555555551 111233
Q ss_pred cCCCCCCeeeccCccCccCCC--CCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCC
Q 002121 261 NNLTNVNELNLAHNDLKGPFP--DLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQI 338 (964)
Q Consensus 261 ~~l~~L~~L~Ls~N~l~~~~~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 338 (964)
.++++|++|+|++|++++.++ .+..+++|++|+|++|.|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|
T Consensus 225 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~--~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L 298 (312)
T 1wwl_A 225 AARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK--QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQV 298 (312)
T ss_dssp HTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS--SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEE
T ss_pred hcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC--hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCC
Confidence 455566666666666665442 3455566666666666664 3344343 6677777777777655 44 6677777
Q ss_pred CEEEcCCccccc
Q 002121 339 QQVKLRNNAFNN 350 (964)
Q Consensus 339 ~~L~L~~N~l~~ 350 (964)
++|+|++|++++
T Consensus 299 ~~L~L~~N~l~~ 310 (312)
T 1wwl_A 299 GNLSLKGNPFLD 310 (312)
T ss_dssp EEEECTTCTTTC
T ss_pred CEEeccCCCCCC
Confidence 777777777764
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2.5e-28 Score=270.64 Aligned_cols=261 Identities=19% Similarity=0.165 Sum_probs=170.3
Q ss_pred EEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCcccccccccccc
Q 002121 92 SLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADN 171 (964)
Q Consensus 92 ~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 171 (964)
.++++.+ .+...+...+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+ |..+++|++|+|++|
T Consensus 14 i~~ls~~-~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 14 IEKVTDS-SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EESCCTT-THHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred Eeecccc-chhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 3444444 3333333333444555666666666665555566666666666666666664443 666666666666666
Q ss_pred ccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCc
Q 002121 172 QLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNA 251 (964)
Q Consensus 172 ~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 251 (964)
++++ +| ..++|+.|++++|++++..+ . .+++|++|++++|++++..+..+..+++|++|+|++|.
T Consensus 91 ~l~~-l~----------~~~~L~~L~l~~n~l~~~~~-~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 155 (317)
T 3o53_A 91 YVQE-LL----------VGPSIETLHAANNNISRVSC-S---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE 155 (317)
T ss_dssp EEEE-EE----------ECTTCCEEECCSSCCSEEEE-C---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSC
T ss_pred cccc-cc----------CCCCcCEEECCCCccCCcCc-c---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCC
Confidence 6652 22 23566666666666663322 2 23557777777777777667677777778888888888
Q ss_pred CccccCcccc-CCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccCh
Q 002121 252 LTGKVPTNLN-NLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPD 330 (964)
Q Consensus 252 l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 330 (964)
+++..+..+. .+++|++|+|++|.|++.+ ....+++|++|+|++|+++ .++..+..+++|+.|+|++|+|+ .+|.
T Consensus 156 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~l~~L~~L~Ls~N~l~--~l~~~~~~l~~L~~L~L~~N~l~-~l~~ 231 (317)
T 3o53_A 156 IDTVNFAELAASSDTLEHLNLQYNFIYDVK-GQVVFAKLKTLDLSSNKLA--FMGPEFQSAAGVTWISLRNNKLV-LIEK 231 (317)
T ss_dssp CCEEEGGGGGGGTTTCCEEECTTSCCCEEE-CCCCCTTCCEEECCSSCCC--EECGGGGGGTTCSEEECTTSCCC-EECT
T ss_pred CCcccHHHHhhccCcCCEEECCCCcCcccc-cccccccCCEEECCCCcCC--cchhhhcccCcccEEECcCCccc-chhh
Confidence 8766666653 6777888888888877763 3345777888888888885 33444777888888888888887 4566
Q ss_pred hccCCCCCCEEEcCCcccc-cccCCCCccCCCCcEEecc-CCccee
Q 002121 331 KLFSYSQIQQVKLRNNAFN-NTLDMGNAVGPLLQLVDLQ-NNQISA 374 (964)
Q Consensus 331 ~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~-~N~l~~ 374 (964)
.+..+++|+.|+|++|++. +..+..+..++.|+.|+++ .+.++.
T Consensus 232 ~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp TCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccC
Confidence 7778888888888888887 6666677777788888887 334444
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.6e-28 Score=272.30 Aligned_cols=237 Identities=18% Similarity=0.155 Sum_probs=130.3
Q ss_pred chhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCC
Q 002121 115 LNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAK 194 (964)
Q Consensus 115 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~ 194 (964)
++.++++.+.+...++..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..| +..+++|+
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--------~~~l~~L~ 83 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--------LESLSTLR 83 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--------ETTCTTCC
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--------hhhcCCCC
Confidence 4444555555543333444455566666666666665555556666666666666666653222 44556666
Q ss_pred eeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCc
Q 002121 195 HFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHN 274 (964)
Q Consensus 195 ~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 274 (964)
+|++++|+++ .++ ..++|++|++++|++++..+.. +++|+.|++++|++++..+..|..+++|++|+|++|
T Consensus 84 ~L~Ls~n~l~-~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 154 (317)
T 3o53_A 84 TLDLNNNYVQ-ELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN 154 (317)
T ss_dssp EEECCSSEEE-EEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTS
T ss_pred EEECcCCccc-ccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCC
Confidence 6666666655 222 1245666666666665544332 355666666666666555555666666666666666
Q ss_pred cCccCCCC-C-CCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCccccccc
Q 002121 275 DLKGPFPD-L-SQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTL 352 (964)
Q Consensus 275 ~l~~~~~~-l-~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 352 (964)
.+++..+. + ..+++|++|+|++|.++.. +. ...+++|++|+|++|++++..+ .+..+++|+.|+|++|+++. +
T Consensus 155 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~-~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~-l 229 (317)
T 3o53_A 155 EIDTVNFAELAASSDTLEHLNLQYNFIYDV--KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-I 229 (317)
T ss_dssp CCCEEEGGGGGGGTTTCCEEECTTSCCCEE--EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-E
T ss_pred CCCcccHHHHhhccCcCCEEECCCCcCccc--cc-ccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccc-h
Confidence 66654433 2 3455666666666666411 21 2235666666666666654333 35556666666666666653 3
Q ss_pred CCCCccCCCCcEEeccCCcce
Q 002121 353 DMGNAVGPLLQLVDLQNNQIS 373 (964)
Q Consensus 353 ~~~~~~l~~L~~L~L~~N~l~ 373 (964)
|..+..+++|+.|+|++|+++
T Consensus 230 ~~~~~~l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 230 EKALRFSQNLEHFDLRGNGFH 250 (317)
T ss_dssp CTTCCCCTTCCEEECTTCCCB
T ss_pred hhHhhcCCCCCEEEccCCCcc
Confidence 444555666666666666665
No 313
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=1e-26 Score=253.63 Aligned_cols=222 Identities=21% Similarity=0.190 Sum_probs=109.3
Q ss_pred hhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCee
Q 002121 117 ILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHF 196 (964)
Q Consensus 117 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L 196 (964)
.++++++.++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++..| ..+..+++|++|
T Consensus 15 ~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L 85 (285)
T 1ozn_A 15 TTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDA------AAFTGLALLEQL 85 (285)
T ss_dssp EEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECT------TTTTTCTTCCEE
T ss_pred EEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCH------hhcCCccCCCEE
Confidence 3444444444 334322 2345555555555554444445555555555555555543222 233444444444
Q ss_pred EccCCc-ccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCcc
Q 002121 197 HFNKNK-LSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHND 275 (964)
Q Consensus 197 ~L~~N~-l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 275 (964)
++++|+ ++ .++...|..+++|++|++++|++++..|..+..+++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 86 ~l~~n~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 164 (285)
T 1ozn_A 86 DLSDNAQLR-SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR 164 (285)
T ss_dssp ECCSCTTCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred eCCCCCCcc-ccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCc
Confidence 444443 22 3333333444444444444444444445555555555555555555554444445555555555555555
Q ss_pred CccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccc
Q 002121 276 LKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFN 349 (964)
Q Consensus 276 l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 349 (964)
+++.++. +..+++|++|+|++|.++ ...|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++.
T Consensus 165 l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 165 ISSVPERAFRGLHSLDRLLLHQNRVA-HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ccccCHHHhcCccccCEEECCCCccc-ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 5554443 455555555555555554 333444555555555555555555444444555555555555555544
No 314
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.1e-26 Score=261.72 Aligned_cols=296 Identities=20% Similarity=0.188 Sum_probs=182.3
Q ss_pred ccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCcccccccccc
Q 002121 90 LRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLA 169 (964)
Q Consensus 90 L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 169 (964)
....++++| .+. .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 33 ~~~c~~~~~-~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 33 NGICKGSSG-SLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp TSEEECCST-TCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CeEeeCCCC-Ccc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 334555554 222 3333333 245555555555553333345555555555555555554444445555555555555
Q ss_pred ccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCC-cccCCCCCCcEEEcc
Q 002121 170 DNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIP-ESLGYVQTLEVLRLD 248 (964)
Q Consensus 170 ~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls 248 (964)
+|+++ .++...|..+++|++|++++|++++..+ ..+..+++|++|+++
T Consensus 109 ~n~l~-------------------------------~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~ 157 (353)
T 2z80_A 109 YNYLS-------------------------------NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVG 157 (353)
T ss_dssp SSCCS-------------------------------SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEE
T ss_pred CCcCC-------------------------------cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECC
Confidence 55554 3444444555555555555555553332 356666677777777
Q ss_pred cC-cCccccCccccCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCcccc
Q 002121 249 RN-ALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQG 326 (964)
Q Consensus 249 ~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 326 (964)
+| .+++..+..|.++++|++|+|++|.+++..+ .+..+++|++|++++|.++ ......+..+++|+.|+|++|++++
T Consensus 158 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 158 NMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDT 236 (353)
T ss_dssp ESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTT
T ss_pred CCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCcccc
Confidence 66 3555555666667777777777777766644 3666777777777777764 3333344557777777777777776
Q ss_pred ccChhcc---CCCCCCEEEcCCcccccc----cCCCCccCCCCcEEeccCCcceeeccC---CCcccceeEeecCC-ccc
Q 002121 327 RVPDKLF---SYSQIQQVKLRNNAFNNT----LDMGNAVGPLLQLVDLQNNQISAITLG---SGIKNYTLILVGNP-VCT 395 (964)
Q Consensus 327 ~~p~~~~---~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~i~~~---~~~~l~~l~l~~Np-~c~ 395 (964)
..+..+. ....++.++|++|.+++. +|..+..+++|+.|+|++|+++.++.. ....++.|+|.+|| .|+
T Consensus 237 ~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 237 FHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp CCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 6555443 467789999999998873 556678899999999999999999864 34558899999999 899
Q ss_pred cc-ccccCccccCCCCCcccccccccCCCC
Q 002121 396 AT-LANTNYCQLQQPTTKAYSTSLANCGGK 424 (964)
Q Consensus 396 ~~-l~~~~~~~~~~~~~~~~~~~~~~c~~~ 424 (964)
|. +.++..|....... + .....|.+|
T Consensus 317 ~~~l~~l~~~~~~~~~~-~--~~~~~C~~p 343 (353)
T 2z80_A 317 CPRIDYLSRWLNKNSQK-E--QGSAKCSGS 343 (353)
T ss_dssp HHHHHHHHHHHHHTTTT-E--ESCCBBTTT
T ss_pred CCCcHHHHHHHHhcccc-C--CCCcccCCC
Confidence 96 77778884333221 1 234567665
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.6e-27 Score=276.67 Aligned_cols=219 Identities=19% Similarity=0.181 Sum_probs=140.4
Q ss_pred CCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCcccc
Q 002121 110 GDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQ 189 (964)
Q Consensus 110 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~ 189 (964)
..+++|++|+|++|.|++..|..|..+++|++|+|++|.+++.+| |..+++|++|+|++|.+++ +| .
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~----------~ 97 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----------V 97 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EE----------E
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CC----------C
Confidence 344567777777777776666777777777777777777776554 7777777777777777763 22 2
Q ss_pred ccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCcccc-CCCCCCe
Q 002121 190 LKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLN-NLTNVNE 268 (964)
Q Consensus 190 l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~ 268 (964)
.++|+.|++++|.+++..+. .+++|+.|++++|+|++..|..++.+++|+.|+|++|.|++.+|..|. .+++|+.
T Consensus 98 ~~~L~~L~L~~N~l~~~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~ 173 (487)
T 3oja_A 98 GPSIETLHAANNNISRVSCS----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEH 173 (487)
T ss_dssp CTTCCEEECCSSCCCCEEEC----CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCE
T ss_pred CCCcCEEECcCCcCCCCCcc----ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccE
Confidence 36777777777777643332 235677777777777777777777777777777777777777777665 6777777
Q ss_pred eeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCccc
Q 002121 269 LNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAF 348 (964)
Q Consensus 269 L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 348 (964)
|+|++|.|++.++ ...+++|++|+|++|.++ . +|..+..+++|+.|+|++|.|++ +|..+..+++|+.|+|++|++
T Consensus 174 L~Ls~N~l~~~~~-~~~l~~L~~L~Ls~N~l~-~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l 249 (487)
T 3oja_A 174 LNLQYNFIYDVKG-QVVFAKLKTLDLSSNKLA-F-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGF 249 (487)
T ss_dssp EECTTSCCCEEEC-CCCCTTCCEEECCSSCCC-E-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCB
T ss_pred EecCCCccccccc-cccCCCCCEEECCCCCCC-C-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCC
Confidence 7777777776633 334666666666666664 2 22235555555555555555553 344444555555555555554
Q ss_pred c
Q 002121 349 N 349 (964)
Q Consensus 349 ~ 349 (964)
.
T Consensus 250 ~ 250 (487)
T 3oja_A 250 H 250 (487)
T ss_dssp C
T ss_pred c
Confidence 4
No 316
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.93 E-value=3.2e-29 Score=292.98 Aligned_cols=328 Identities=19% Similarity=0.168 Sum_probs=207.1
Q ss_pred CCeeEEEcCCCCccc----cccCCcCCCCcccEEecccCCCCCCCCCCCCC-Ccc----cchhhccccccccC----cCC
Q 002121 64 SRVTALGLSTMGLTG----KLSGDIGGLTELRSLDLSYNGGLTGSLSPRIG-DLQ----KLNILILAGCGFTG----NIP 130 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g----~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~-~l~----~L~~L~L~~n~l~~----~~p 130 (964)
.+++.|+|++|++++ .++..+..+++|++|+|++| .+.+..+..+. .+. +|++|+|++|.++. .+|
T Consensus 28 ~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n-~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~ 106 (461)
T 1z7x_W 28 QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSN-ELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLS 106 (461)
T ss_dssp TTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTC-CCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCC-cCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHH
Confidence 467777777777764 34556667777777777777 45543332222 233 57777777777773 456
Q ss_pred cccCCCCCccEEEcccCcccCcCCCcCC-----CccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccc
Q 002121 131 DEIGNLAELSFLALNSNNFSGRIPPSLG-----KLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSG 205 (964)
Q Consensus 131 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g 205 (964)
..+..+++|++|+|++|.++...+..+. .+++|++|+|++|++++..+..+ ...+..+++|++|++++|.++.
T Consensus 107 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l--~~~l~~~~~L~~L~L~~n~i~~ 184 (461)
T 1z7x_W 107 STLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL--ASVLRAKPDFKELTVSNNDINE 184 (461)
T ss_dssp HHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH--HHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH--HHHHhhCCCCCEEECcCCCcch
Confidence 7777777777777777777643333222 24567777777777764221000 0235556777888888887764
Q ss_pred ccccccc----CCCcceeEEEccCCcCccc----CCcccCCCCCCcEEEcccCcCcccc-----CccccCCCCCCeeecc
Q 002121 206 TISEQLF----SPDMVLIHVLFDGNQLSGN----IPESLGYVQTLEVLRLDRNALTGKV-----PTNLNNLTNVNELNLA 272 (964)
Q Consensus 206 ~l~~~~f----~~~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~-----p~~~~~l~~L~~L~Ls 272 (964)
..+..+. ...++|++|++++|++++. ++..+..+++|+.|+|++|.+++.. +..+..+++|++|+|+
T Consensus 185 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~ 264 (461)
T 1z7x_W 185 AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIW 264 (461)
T ss_dssp HHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECc
Confidence 3332222 2344777888888877753 4666667777888888888776432 3333457778888888
Q ss_pred CccCccC-----CCCCCCCCCCCEEEccCCCCCCCCCCcccC-----CCCCCcEEECCCCccccc----cChhccCCCCC
Q 002121 273 HNDLKGP-----FPDLSQMNSLSYVDLSNNSFDPTEAPLWFS-----TLPSLTTLICEFGSLQGR----VPDKLFSYSQI 338 (964)
Q Consensus 273 ~N~l~~~-----~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L 338 (964)
+|.++.. +..+..+++|++|+|++|.++ ...+..+. ..++|+.|+|++|.+++. ++..+..+++|
T Consensus 265 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~-~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 343 (461)
T 1z7x_W 265 ECGITAKGCGDLCRVLRAKESLKELSLAGNELG-DEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFL 343 (461)
T ss_dssp TSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH-HHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSC
T ss_pred CCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc-hHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCc
Confidence 8877763 333556777888888888774 22121222 235788888888887765 45566677888
Q ss_pred CEEEcCCcccccccCCCCcc-----CCCCcEEeccCCccee-----ec--cCCCcccceeEeecCCccc
Q 002121 339 QQVKLRNNAFNNTLDMGNAV-----GPLLQLVDLQNNQISA-----IT--LGSGIKNYTLILVGNPVCT 395 (964)
Q Consensus 339 ~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~-----i~--~~~~~~l~~l~l~~Np~c~ 395 (964)
+.|+|++|++++..+..+.. .++|+.|+|++|+++. ++ ......++.|+|.+|++.+
T Consensus 344 ~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 344 LELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred cEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 88888888777655443332 5678888888888773 33 1234557778888887543
No 317
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=4.3e-25 Score=241.12 Aligned_cols=214 Identities=20% Similarity=0.145 Sum_probs=175.6
Q ss_pred cccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCC
Q 002121 187 LDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNV 266 (964)
Q Consensus 187 l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 266 (964)
+..+++++.+++++|.++ .+|..++ ..++.|++++|+|++..+..|..+++|+.|+|++|.|++..+. ..+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 455666666666666666 5665543 4677888888888877788888888899999999988854332 788889
Q ss_pred CeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCc
Q 002121 267 NELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNN 346 (964)
Q Consensus 267 ~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 346 (964)
++|+|++|+|+.++..+..+++|++|+|++|+++ ...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCC-CCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCc-ccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 9999999999877777888899999999999997 666678899999999999999999888888889999999999999
Q ss_pred ccccccCCCCccCCCCcEEeccCCcceeeccCCC--cccceeEeecCC-cccccccccCccccC
Q 002121 347 AFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSG--IKNYTLILVGNP-VCTATLANTNYCQLQ 407 (964)
Q Consensus 347 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~--~~l~~l~l~~Np-~c~~~l~~~~~~~~~ 407 (964)
+|+...+..+..+++|+.|+|++|+|+.++...+ ..+..++|.+|| .|+|.+.++..|..+
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~~~~l~~wl~~ 222 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEILYFRRWLQD 222 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGGGHHHHHHHHH
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCccHHHHHHHHh
Confidence 9998888888899999999999999998886543 347889999999 899999888888543
No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.8e-26 Score=270.68 Aligned_cols=253 Identities=18% Similarity=0.150 Sum_probs=211.5
Q ss_pred EcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcc
Q 002121 70 GLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNF 149 (964)
Q Consensus 70 ~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 149 (964)
++....+...+......+++|++|+|++| .+.+..|..|+.+++|++|+|++|.+++..| |..+++|++|+|++|.|
T Consensus 16 ~~~~~~l~~~l~~l~~~~~~L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l 92 (487)
T 3oja_A 16 KVTDSSLKQALASLRQSAWNVKELDLSGN-PLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYV 92 (487)
T ss_dssp SCCTTTHHHHHHTTSTTGGGCCEEECCSS-CCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEE
T ss_pred cCchhhhHHHHHHhcccCCCccEEEeeCC-cCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcC
Confidence 44444454444445556668999999999 7888888899999999999999999987665 89999999999999999
Q ss_pred cCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCc
Q 002121 150 SGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLS 229 (964)
Q Consensus 150 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~ 229 (964)
++..+ .++|++|+|++|.+++..+ ..+++|+.|+|++|.+++. +...|..+++|+.|+|++|+|+
T Consensus 93 ~~l~~-----~~~L~~L~L~~N~l~~~~~---------~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~ 157 (487)
T 3oja_A 93 QELLV-----GPSIETLHAANNNISRVSC---------SRGQGKKNIYLANNKITML-RDLDEGCRSRVQYLDLKLNEID 157 (487)
T ss_dssp EEEEE-----CTTCCEEECCSSCCCCEEE---------CCCSSCEEEECCSSCCCSG-GGBCGGGGSSEEEEECTTSCCC
T ss_pred CCCCC-----CCCcCEEECcCCcCCCCCc---------cccCCCCEEECCCCCCCCC-CchhhcCCCCCCEEECCCCCCC
Confidence 85432 3789999999999985443 2357899999999999854 4445677889999999999999
Q ss_pred ccCCcccC-CCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCccc
Q 002121 230 GNIPESLG-YVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWF 308 (964)
Q Consensus 230 ~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 308 (964)
+.+|..+. .+++|+.|+|++|.|++..+ +..+++|+.|+|++|.|++.++.+..+++|+.|+|++|.++ .+|..+
T Consensus 158 ~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~--~lp~~l 233 (487)
T 3oja_A 158 TVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV--LIEKAL 233 (487)
T ss_dssp EEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC--EECTTC
T ss_pred CcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCc--ccchhh
Confidence 98888886 79999999999999996633 44699999999999999999999999999999999999996 367779
Q ss_pred CCCCCCcEEECCCCccc-cccChhccCCCCCCEEEcC
Q 002121 309 STLPSLTTLICEFGSLQ-GRVPDKLFSYSQIQQVKLR 344 (964)
Q Consensus 309 ~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~ 344 (964)
..+++|+.|+|++|.+. +.+|..+..++.|+.|+++
T Consensus 234 ~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 99999999999999998 6778888888888877775
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=2.4e-24 Score=257.98 Aligned_cols=259 Identities=22% Similarity=0.249 Sum_probs=216.7
Q ss_pred CcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCcccccccc
Q 002121 88 TELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLD 167 (964)
Q Consensus 88 ~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 167 (964)
..++.|++++| .+. .+|..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n-~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGES-GLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSS-CCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEE
T ss_pred CCCcEEEecCC-CcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEE
Confidence 45899999999 566 7787776 79999999999999 6776 5799999999999999 5665 678999999
Q ss_pred ccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEc
Q 002121 168 LADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRL 247 (964)
Q Consensus 168 Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 247 (964)
|++|+++ .+|. .+++|+.|++++|+++ .+|.. .++|++|++++|+|++ +|. .+.+|+.|++
T Consensus 108 Ls~N~l~-~l~~---------~l~~L~~L~L~~N~l~-~lp~~----l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L 168 (622)
T 3g06_A 108 IFSNPLT-HLPA---------LPSGLCKLWIFGNQLT-SLPVL----PPGLQELSVSDNQLAS-LPA---LPSELCKLWA 168 (622)
T ss_dssp ECSCCCC-CCCC---------CCTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CcCCcCC-CCCC---------CCCCcCEEECCCCCCC-cCCCC----CCCCCEEECcCCcCCC-cCC---ccCCCCEEEC
Confidence 9999998 4552 5689999999999998 57654 4889999999999996 443 3578999999
Q ss_pred ccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccc
Q 002121 248 DRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGR 327 (964)
Q Consensus 248 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 327 (964)
++|.|++ +| ..+++|+.|+|++|.|++++.. +++|+.|++++|.++ .+|. .+++|+.|+|++|+|++
T Consensus 169 ~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~--~l~~---~~~~L~~L~Ls~N~L~~- 235 (622)
T 3g06_A 169 YNNQLTS-LP---MLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT--SLPA---LPSGLKELIVSGNRLTS- 235 (622)
T ss_dssp CSSCCSC-CC---CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS--SCCC---CCTTCCEEECCSSCCSC-
T ss_pred CCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCccc--ccCC---CCCCCCEEEccCCccCc-
Confidence 9999994 66 5578999999999999986653 478999999999996 3443 35899999999999997
Q ss_pred cChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeecc--CCCcccceeEeecCCccccc
Q 002121 328 VPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITL--GSGIKNYTLILVGNPVCTAT 397 (964)
Q Consensus 328 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~--~~~~~l~~l~l~~Np~c~~~ 397 (964)
+| ..+++|+.|+|++|+|+.... .+++|+.|+|++|+|+.+|. .....+..|+|.+|++....
T Consensus 236 lp---~~l~~L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l~~~~ 300 (622)
T 3g06_A 236 LP---VLPSELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERT 300 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCCCHHH
T ss_pred CC---CCCCcCcEEECCCCCCCcCCc----ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCCCCcC
Confidence 45 567899999999999996544 67889999999999999874 34556888999999965433
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=6.3e-25 Score=237.43 Aligned_cols=215 Identities=23% Similarity=0.289 Sum_probs=158.8
Q ss_pred CCCCCCccEEecC-CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcC
Q 002121 51 DPCGSWEGVTCNN-SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNI 129 (964)
Q Consensus 51 ~~C~~w~gv~C~~-~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 129 (964)
+.| .|.|+.|.- ..++.+++++++++ .+|..+. ++|++|+|++| .+.+..+..|.++++|++|+|++|.++...
T Consensus 3 ~~C-~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 3 ALC-KKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSN-KLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCB-GGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSS-CCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred ccC-CCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCC-CCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 555 899999864 56789999999998 4676554 67888899888 677766667888888888888888887555
Q ss_pred CcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccc
Q 002121 130 PDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISE 209 (964)
Q Consensus 130 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~ 209 (964)
+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++ ++.
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------------------~~~ 126 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKS-------------------------------LPP 126 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCC-------------------------------CCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCe-------------------------------eCH
Confidence 5556778888888888888886666667777777777777777763 222
Q ss_pred cccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCC
Q 002121 210 QLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNS 288 (964)
Q Consensus 210 ~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~ 288 (964)
..|..+++|++|++++|+|++..+..|..+++|+.|+|++|++++..+..|.++++|++|+|++|+|++.++. +..+++
T Consensus 127 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 206 (270)
T 2o6q_A 127 RVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEK 206 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred HHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccC
Confidence 3334444455555555555555555577778888888888888866666788888888888888888877765 777888
Q ss_pred CCEEEccCCCCCC
Q 002121 289 LSYVDLSNNSFDP 301 (964)
Q Consensus 289 L~~L~Ls~N~l~~ 301 (964)
|+.|+|++|++.+
T Consensus 207 L~~L~l~~N~~~c 219 (270)
T 2o6q_A 207 LKMLQLQENPWDC 219 (270)
T ss_dssp CCEEECCSSCBCC
T ss_pred CCEEEecCCCeeC
Confidence 8888888888863
No 321
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=3.7e-26 Score=270.51 Aligned_cols=184 Identities=16% Similarity=0.206 Sum_probs=146.6
Q ss_pred ccceeecCCcEEEEEEEecCCcEEEEEEecCCCcc--------hhHHHHHHHHHHHhcCCCCccceeEEEEeeCceEEEE
Q 002121 631 ESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQ--------GGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 631 ~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 702 (964)
..+.||+|+||+||+|.. .++.+|+|+....... ..+++.+|++++++++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 357899999999999955 5788999986543221 1235899999999999999997777777888899999
Q ss_pred EeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCC
Q 002121 703 EFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSS 782 (964)
Q Consensus 703 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~ 782 (964)
||+++|+|.+++.. +..++.|+++||+|||+++ |+||||||+|||+++ .+||+|||+++......
T Consensus 419 E~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 419 SYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp ECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred ECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 99999999999975 5689999999999999988 999999999999999 99999999999875422
Q ss_pred CCc-----eeecccccCcccCcccccc--CCCCCchhHHHHHHHHHHHHhCCCCC
Q 002121 783 KGH-----VSTQVKGTMGYLDPEYYMT--QQLTEKSDVYSFGVVMLELITAKQPI 830 (964)
Q Consensus 783 ~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~S~Gvvl~elltg~~p~ 830 (964)
... ......||+.|||||++.. ..|+..+|+|+...-..+-+.++.+|
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 111 1235679999999999976 56788899999998888888777665
No 322
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.92 E-value=3.4e-28 Score=284.26 Aligned_cols=329 Identities=18% Similarity=0.139 Sum_probs=257.2
Q ss_pred CCeeEEEcCCCCccccccCC-cCCCCcccEEecccCCCCCC----CCCCCCCCcccchhhccccccccCcCCcccC-CCC
Q 002121 64 SRVTALGLSTMGLTGKLSGD-IGGLTELRSLDLSYNGGLTG----SLSPRIGDLQKLNILILAGCGFTGNIPDEIG-NLA 137 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~-l~~l~~L~~L~L~~N~~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~ 137 (964)
.+++.|+|++++++...... +..+++|++|+|++| .+.+ .++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~-~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDC-GLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESS-CCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCC-CCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 36899999999998654443 788999999999999 5664 4566778889999999999999865444433 355
Q ss_pred ----CccEEEcccCcccC----cCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccc
Q 002121 138 ----ELSFLALNSNNFSG----RIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISE 209 (964)
Q Consensus 138 ----~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~ 209 (964)
+|++|+|++|+++. .++..+.++++|++|+|++|.+++..+..+. .......++|++|++++|++++....
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~-~~l~~~~~~L~~L~L~~n~l~~~~~~ 160 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLC-EGLLDPQCRLEKLQLEYCSLSAASCE 160 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHH-HHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHH-HHHhcCCCcceEEECCCCCCCHHHHH
Confidence 79999999999994 5688899999999999999999854332110 00122356899999999999854322
Q ss_pred ---cccCCCcceeEEEccCCcCcccCCcccC-----CCCCCcEEEcccCcCccc----cCccccCCCCCCeeeccCccCc
Q 002121 210 ---QLFSPDMVLIHVLFDGNQLSGNIPESLG-----YVQTLEVLRLDRNALTGK----VPTNLNNLTNVNELNLAHNDLK 277 (964)
Q Consensus 210 ---~~f~~~~~L~~L~l~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 277 (964)
..+..+++|++|++++|.++...+..+. ..++|+.|+|++|.+++. ++..+..+++|++|+|++|.++
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 2345578999999999999876555543 367999999999999963 6788889999999999999998
Q ss_pred cCC-----CC-CCCCCCCCEEEccCCCCCCCC---CCcccCCCCCCcEEECCCCccccccChhccC-----CCCCCEEEc
Q 002121 278 GPF-----PD-LSQMNSLSYVDLSNNSFDPTE---APLWFSTLPSLTTLICEFGSLQGRVPDKLFS-----YSQIQQVKL 343 (964)
Q Consensus 278 ~~~-----~~-l~~l~~L~~L~Ls~N~l~~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L 343 (964)
+.. +. +..+++|++|++++|.++... ++..+..+++|+.|+|++|.+.+..+..+.. .++|+.|+|
T Consensus 241 ~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 320 (461)
T 1z7x_W 241 DVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 320 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEc
Confidence 642 22 446899999999999996221 4666778999999999999998776655543 379999999
Q ss_pred CCcccccc----cCCCCccCCCCcEEeccCCcceeeccC--------CCcccceeEeecCCcc
Q 002121 344 RNNAFNNT----LDMGNAVGPLLQLVDLQNNQISAITLG--------SGIKNYTLILVGNPVC 394 (964)
Q Consensus 344 ~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~i~~~--------~~~~l~~l~l~~Np~c 394 (964)
++|.+++. ++..+..+++|+.|+|++|+++..... ....++.|+|.+|.+.
T Consensus 321 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 321 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp TTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred CCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 99999876 345566779999999999999876432 1346889999999864
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=3.2e-24 Score=232.64 Aligned_cols=197 Identities=17% Similarity=0.190 Sum_probs=135.0
Q ss_pred CCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCCCCCC
Q 002121 225 GNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSFDPTE 303 (964)
Q Consensus 225 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~ 303 (964)
+|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|++++|.+++..+ .+..+++|++|++++|.++...
T Consensus 61 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 140 (276)
T 2z62_A 61 RCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK 140 (276)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC
T ss_pred CCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceec
Confidence 333333344456666677777777777776666677777777777777777777665 3777777777777777776444
Q ss_pred CCcccCCCCCCcEEECCCCccccccChhccCCCCCC----EEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCC
Q 002121 304 APLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQ----QVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGS 379 (964)
Q Consensus 304 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~ 379 (964)
.|..+..+++|+.|+|++|++++..+..+..+++|+ .|+|++|++++..+..+... +|+.|+|++|+++.++...
T Consensus 141 l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~ 219 (276)
T 2z62_A 141 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLKELALDTNQLKSVPDGI 219 (276)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSC-CEEEEECCSSCCSCCCTTT
T ss_pred CchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCC-cccEEECCCCceeecCHhH
Confidence 577788888888888888888877777777666666 78888888887766655544 7888888888888887543
Q ss_pred ---CcccceeEeecCC-ccccc-ccccCccccCCCCCcccccccccCCCCC
Q 002121 380 ---GIKNYTLILVGNP-VCTAT-LANTNYCQLQQPTTKAYSTSLANCGGKS 425 (964)
Q Consensus 380 ---~~~l~~l~l~~Np-~c~~~-l~~~~~~~~~~~~~~~~~~~~~~c~~~~ 425 (964)
...++.|+|.+|| .|+|. +.++..|...... .......|..+.
T Consensus 220 ~~~l~~L~~L~l~~N~~~c~c~~l~~l~~~~~~~~~---~~~~~~~C~~~~ 267 (276)
T 2z62_A 220 FDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQ---KEQGSAKCSGSG 267 (276)
T ss_dssp TTTCCSCCEEECCSSCBCCCTTTTHHHHHHHHHTGG---GBCSCCBBTTTC
T ss_pred hcccccccEEEccCCcccccCCchHHHHHHHHhccc---ccCCCceeeCCC
Confidence 3456778888888 78985 6666677432221 122334676653
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=4.6e-24 Score=230.66 Aligned_cols=208 Identities=21% Similarity=0.246 Sum_probs=128.8
Q ss_pred CCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeecc
Q 002121 193 AKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLA 272 (964)
Q Consensus 193 L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 272 (964)
++.+++++|+++ .+|..+. .++++|++++|++++..+..|..+++|++|+|++|.++...+..|.++++|++|+|+
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP---ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCEEEccCCCCC-ccCCCCC---CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 344444444444 3443322 345556666666665555566666666666666666664444555666666666666
Q ss_pred CccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccc
Q 002121 273 HNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNT 351 (964)
Q Consensus 273 ~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 351 (964)
+|.+++.++. +..+++|++|+|++|.++ ...+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 6666665554 466666666666666665 44555566666677777777766666656666667777777777777666
Q ss_pred cCCCCccCCCCcEEeccCCcceeeccCC---CcccceeEeecCC-ccccc-ccccCccc
Q 002121 352 LDMGNAVGPLLQLVDLQNNQISAITLGS---GIKNYTLILVGNP-VCTAT-LANTNYCQ 405 (964)
Q Consensus 352 ~~~~~~~l~~L~~L~L~~N~l~~i~~~~---~~~l~~l~l~~Np-~c~~~-l~~~~~~~ 405 (964)
.+..|..+++|+.|+|++|+++.++... ...+..|+|.+|| .|+|. +.++..|.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~~~l 231 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNGIIYMAKWL 231 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSSSHHHHHHH
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCccHHHHHHHH
Confidence 6666666777777777777777666432 2345667777778 68886 44555563
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=3.5e-24 Score=232.34 Aligned_cols=212 Identities=23% Similarity=0.250 Sum_probs=134.3
Q ss_pred cccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCC
Q 002121 79 KLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLG 158 (964)
Q Consensus 79 ~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 158 (964)
.+|..+. ++|++|+|++| .+.+..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|.
T Consensus 21 ~ip~~l~--~~l~~L~ls~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFN-PLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS 97 (276)
T ss_dssp SCCSSSC--TTCCEEECTTC-CCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTT
T ss_pred ccCCCCC--CCccEEECCCC-cccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhc
Confidence 3444443 46788888888 67766666777777788888887777766666777777777777777777766667777
Q ss_pred CccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcc-cCCcccC
Q 002121 159 KLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSG-NIPESLG 237 (964)
Q Consensus 159 ~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~-~~p~~~~ 237 (964)
++++|++|++++|++++..+ ..+..+++|++|++++| ++++ .+|..+.
T Consensus 98 ~l~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L~l~~n-------------------------~l~~~~l~~~~~ 146 (276)
T 2z62_A 98 GLSSLQKLVAVETNLASLEN------FPIGHLKTLKELNVAHN-------------------------LIQSFKLPEYFS 146 (276)
T ss_dssp TCTTCCEEECTTSCCCCSTT------CCCTTCTTCCEEECCSS-------------------------CCCCCCCCGGGG
T ss_pred CCccccEEECCCCCccccCc------hhcccCCCCCEEECcCC-------------------------ccceecCchhhc
Confidence 77777777777777763221 12344444444444444 4443 2466677
Q ss_pred CCCCCcEEEcccCcCccccCccccCCCCCC----eeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCC
Q 002121 238 YVQTLEVLRLDRNALTGKVPTNLNNLTNVN----ELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPS 313 (964)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 313 (964)
.+++|+.|+|++|++++..+..|..+++|+ .|+|++|.+++.++......+|++|+|++|+++ ...+..|..+++
T Consensus 147 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~~l~~ 225 (276)
T 2z62_A 147 NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTS 225 (276)
T ss_dssp GCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCS-CCCTTTTTTCCS
T ss_pred cCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCcee-ecCHhHhccccc
Confidence 777777777777777766666666666666 666777777666655444445555666555554 333333444555
Q ss_pred CcEEECCCCccc
Q 002121 314 LTTLICEFGSLQ 325 (964)
Q Consensus 314 L~~L~Ls~N~l~ 325 (964)
|+.|+|++|.+.
T Consensus 226 L~~L~l~~N~~~ 237 (276)
T 2z62_A 226 LQKIWLHTNPWD 237 (276)
T ss_dssp CCEEECCSSCBC
T ss_pred ccEEEccCCccc
Confidence 555555555444
No 326
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=6e-24 Score=234.64 Aligned_cols=227 Identities=17% Similarity=0.165 Sum_probs=130.0
Q ss_pred cchhhccccccccCc----CCcccCCCCCccEEEcccCcccCcCCCcC--CCccccccccccccccccccCcccCCCCcc
Q 002121 114 KLNILILAGCGFTGN----IPDEIGNLAELSFLALNSNNFSGRIPPSL--GKLSQLYWLDLADNQLTGSIPVSTITSPGL 187 (964)
Q Consensus 114 ~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l 187 (964)
.++.|.+.++.++.. ++. +..+++|++|+|++|.+++..|..+ .++++|++|+|++|++++..|.. ....+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~--~~~~~ 141 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALR-VLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWL--AELQQ 141 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHH-HHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSH--HHHHT
T ss_pred ceeEEEEeCCcCCHHHHHHHHH-hcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhh--HHHHh
Confidence 355566666655421 111 2235679999999999998888888 88899999999999988544410 00112
Q ss_pred ccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccc--c--CccccCC
Q 002121 188 DQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGK--V--PTNLNNL 263 (964)
Q Consensus 188 ~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l 263 (964)
..+++|++|+|++|++ ++..+..|+.+++|++|+|++|++.+. + +..+..+
T Consensus 142 ~~~~~L~~L~Ls~n~l-------------------------~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 142 WLKPGLKVLSIAQAHS-------------------------PAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp TBCSCCCEEEEECCSS-------------------------CCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred hhccCCCEEEeeCCCc-------------------------chhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 2345555555555555 444445555555555555555555431 1 1223455
Q ss_pred CCCCeeeccCccCccCCCC----CCCCCCCCEEEccCCCCCCCCCCcccCCC---CCCcEEECCCCccccccChhccCCC
Q 002121 264 TNVNELNLAHNDLKGPFPD----LSQMNSLSYVDLSNNSFDPTEAPLWFSTL---PSLTTLICEFGSLQGRVPDKLFSYS 336 (964)
Q Consensus 264 ~~L~~L~Ls~N~l~~~~~~----l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~ 336 (964)
++|++|+|++|+++..... +..+++|++|+|++|.++ ...|..+..+ ++|++|+|++|+|+ .+|..+. +
T Consensus 197 ~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~-~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~ 272 (310)
T 4glp_A 197 PAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLR-ATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--A 272 (310)
T ss_dssp CCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCC-CCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--S
T ss_pred CCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCC-ccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--C
Confidence 5566666666655433221 244555666666666654 3323333333 46666666666666 4454443 5
Q ss_pred CCCEEEcCCcccccccCCCCccCCCCcEEeccCCccee
Q 002121 337 QIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISA 374 (964)
Q Consensus 337 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (964)
+|+.|+|++|++++... +..+++|+.|+|++|+|+.
T Consensus 273 ~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 273 KLRVLDLSSNRLNRAPQ--PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCSCEECCSCCCCSCCC--TTSCCCCSCEECSSTTTSC
T ss_pred CCCEEECCCCcCCCCch--hhhCCCccEEECcCCCCCC
Confidence 66666666666665422 4566667777777776653
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=2e-23 Score=225.79 Aligned_cols=224 Identities=19% Similarity=0.230 Sum_probs=127.3
Q ss_pred cccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCcccccc
Q 002121 112 LQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLK 191 (964)
Q Consensus 112 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~ 191 (964)
+.++..+++..+.+.... .+..+++|+.|++++|.++. + ..+..+++|++|+|++|++++ ++ .+..++
T Consensus 18 ~~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~~-------~l~~l~ 85 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-IS-------ALKELT 85 (272)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-CG-------GGTTCT
T ss_pred HHHHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-ch-------hhcCCC
Confidence 456666777777766432 35567778888888887773 3 347777778888888877763 22 455666
Q ss_pred CCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeec
Q 002121 192 NAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNL 271 (964)
Q Consensus 192 ~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 271 (964)
+|++|++++|.++ .++...|..+++|++|++++|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|
T Consensus 86 ~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 86 NLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCccC-ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 6666666666665 444444555555555555555555555555555555555555555555444445555555555555
Q ss_pred cCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCccccc
Q 002121 272 AHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNN 350 (964)
Q Consensus 272 s~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 350 (964)
++|++++.++. +..+++|++|+|++|+++ ...+..+..+++|+.|+|++|.+.+. +++|+.|+++.|.+++
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g 236 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSG 236 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGG
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCC-ccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCC
Confidence 55555554443 345555555555555554 33334445555555555555544422 2344444555555554
Q ss_pred ccCCCC
Q 002121 351 TLDMGN 356 (964)
Q Consensus 351 ~~~~~~ 356 (964)
.+|..+
T Consensus 237 ~ip~~~ 242 (272)
T 3rfs_A 237 VVRNSA 242 (272)
T ss_dssp GBBCTT
T ss_pred cccCcc
Confidence 444433
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=7.8e-24 Score=229.09 Aligned_cols=227 Identities=24% Similarity=0.308 Sum_probs=164.1
Q ss_pred cccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccc
Q 002121 89 ELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDL 168 (964)
Q Consensus 89 ~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 168 (964)
++..+++..+ .+... ..+..+.+|+.|++++|.++ .++ .+..+++|++|+|++|.+++. ..+.++++|++|+|
T Consensus 20 ~l~~l~l~~~-~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 20 ETIKANLKKK-SVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHTCS-CTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEEC
T ss_pred HHHHHHhcCc-ccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEEC
Confidence 3444455444 23322 23445566666666666665 222 356666666666666666642 35666666666666
Q ss_pred cccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcc
Q 002121 169 ADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLD 248 (964)
Q Consensus 169 s~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 248 (964)
++|++++..| ..+..+++|++|++++|+++ .++...|..+++|++|++++|++++..+..+..+++|+.|+|+
T Consensus 93 ~~n~l~~~~~------~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 165 (272)
T 3rfs_A 93 TGNQLQSLPN------GVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLS 165 (272)
T ss_dssp TTSCCCCCCT------TTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCccCccCh------hHhcCCcCCCEEECCCCcCC-ccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECC
Confidence 6666663222 23556666666666666666 5555667777778888888888887777778899999999999
Q ss_pred cCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccc
Q 002121 249 RNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGR 327 (964)
Q Consensus 249 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 327 (964)
+|++++..+..|.++++|++|+|++|++++.++. +..+++|++|+|++|++. +.+++|+.|++..|.+.|.
T Consensus 166 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~--------~~~~~l~~l~~~~n~~~g~ 237 (272)
T 3rfs_A 166 YNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD--------CTCPGIRYLSEWINKHSGV 237 (272)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC--------CCTTTTHHHHHHHHHTGGG
T ss_pred CCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc--------ccCcHHHHHHHHHHhCCCc
Confidence 9999988888889999999999999999998876 788999999999999985 3467899999999999999
Q ss_pred cChhccCCCC
Q 002121 328 VPDKLFSYSQ 337 (964)
Q Consensus 328 ~p~~~~~l~~ 337 (964)
+|..++.+..
T Consensus 238 ip~~~~~~~~ 247 (272)
T 3rfs_A 238 VRNSAGSVAP 247 (272)
T ss_dssp BBCTTSCBCG
T ss_pred ccCcccccCC
Confidence 9998877653
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2e-22 Score=219.93 Aligned_cols=134 Identities=22% Similarity=0.235 Sum_probs=79.2
Q ss_pred CCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcE
Q 002121 238 YVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTT 316 (964)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~ 316 (964)
.+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++.++. +.++++|++|+|++|+++ ...+..|..+++|+.
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEK 152 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC-ccChhhcccccCCCE
Confidence 4445555555555555 4455555555555555555555555443 555555555555555554 444445566666666
Q ss_pred EECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCccee
Q 002121 317 LICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISA 374 (964)
Q Consensus 317 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (964)
|+|++|+|++..+..|..+++|+.|+|++|+++ .+|..+..++.|+.|+|++|+|.+
T Consensus 153 L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 153 LSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp EECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred EECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 666666666555555666666777777777666 334455555677777777777765
No 330
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.4e-23 Score=231.79 Aligned_cols=200 Identities=18% Similarity=0.147 Sum_probs=102.1
Q ss_pred cchhhccccccccCcCCccc--CCCCCccEEEcccCcccCcCC----CcCCCccccccccccccccccccCcccCCCCcc
Q 002121 114 KLNILILAGCGFTGNIPDEI--GNLAELSFLALNSNNFSGRIP----PSLGKLSQLYWLDLADNQLTGSIPVSTITSPGL 187 (964)
Q Consensus 114 ~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l 187 (964)
+|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..| ..+
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~------~~~ 165 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSC------EQV 165 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCT------TSC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhH------HHh
Confidence 35555555555554444444 445555555555555544332 123344455555555555543222 234
Q ss_pred ccccCCCeeEccCCccccc--cc-ccccCCCcceeEEEccCCcCcccCCc----ccCCCCCCcEEEcccCcCccccCccc
Q 002121 188 DQLKNAKHFHFNKNKLSGT--IS-EQLFSPDMVLIHVLFDGNQLSGNIPE----SLGYVQTLEVLRLDRNALTGKVPTNL 260 (964)
Q Consensus 188 ~~l~~L~~L~L~~N~l~g~--l~-~~~f~~~~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~ 260 (964)
..+++|++|+|++|++.+. ++ ...+..+++|++|++++|+++. ++. .++.+++|++|+|++|+|++..|..+
T Consensus 166 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~ 244 (310)
T 4glp_A 166 RAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSA 244 (310)
T ss_dssp CCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCC
T ss_pred ccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhH
Confidence 4445555555555554321 11 1222344455555555555542 111 23455666666666666665555555
Q ss_pred cCC---CCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccc
Q 002121 261 NNL---TNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQ 325 (964)
Q Consensus 261 ~~l---~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 325 (964)
..+ ++|++|+|++|+|+.++..+. ++|++|+|++|++++. |. +..+++|+.|+|++|+++
T Consensus 245 ~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~--~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 245 PRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRA--PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp SSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSC--CC-TTSCCCCSCEECSSTTTS
T ss_pred HhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCC--ch-hhhCCCccEEECcCCCCC
Confidence 554 466666666666665544442 5666666666666522 22 456667777777777665
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=9e-23 Score=217.94 Aligned_cols=188 Identities=26% Similarity=0.333 Sum_probs=111.3
Q ss_pred CCCCccEEecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcc
Q 002121 53 CGSWEGVTCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDE 132 (964)
Q Consensus 53 C~~w~gv~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 132 (964)
|+.|.|+.|.. ..+.+++++++++ .+|..+. +.|+.|+|++| .+.+..+..|.++++|++|+|++|.|++..|..
T Consensus 4 Cp~~~gC~C~~-~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 78 (251)
T 3m19_A 4 CETVTGCTCNE-GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQST-GLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV 78 (251)
T ss_dssp CHHHHSSEEEG-GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTS-CCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTT
T ss_pred CCCCCceEcCC-CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCC-CcCccCHhHhcCcccCCEEECCCCcCCccCHhH
Confidence 55899999953 3456888888887 5555554 46777777777 566666666666666666666666666555555
Q ss_pred cCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCccccccccccc
Q 002121 133 IGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLF 212 (964)
Q Consensus 133 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f 212 (964)
|..+++|++|+|++|+|++..+..|.++++|++|+|++|+++
T Consensus 79 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-------------------------------------- 120 (251)
T 3m19_A 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-------------------------------------- 120 (251)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC--------------------------------------
T ss_pred hccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCC--------------------------------------
Confidence 666666666666666666554455555555555555555554
Q ss_pred CCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCE
Q 002121 213 SPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSY 291 (964)
Q Consensus 213 ~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~ 291 (964)
+..+..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++.++. +..+++|++
T Consensus 121 -----------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 183 (251)
T 3m19_A 121 -----------------SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQT 183 (251)
T ss_dssp -----------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred -----------------CcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 12222334445555555555555544444555555555555555555555542 555566666
Q ss_pred EEccCCCCC
Q 002121 292 VDLSNNSFD 300 (964)
Q Consensus 292 L~Ls~N~l~ 300 (964)
|+|++|+++
T Consensus 184 L~l~~N~~~ 192 (251)
T 3m19_A 184 ITLFGNQFD 192 (251)
T ss_dssp EECCSCCBC
T ss_pred EEeeCCcee
Confidence 666666664
No 332
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=4.3e-23 Score=223.90 Aligned_cols=153 Identities=13% Similarity=0.068 Sum_probs=124.1
Q ss_pred HHHHHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCc------------------chhHHHHHHHHHHHhc
Q 002121 619 YDELKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSM------------------QGGLEFKTEIELLSRV 680 (964)
Q Consensus 619 ~~el~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l 680 (964)
...+......|...+.||+|+||.||+|...+|+.||||+++.... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3444555667777899999999999999997799999999864322 1245688999999999
Q ss_pred CCCCccceeEEEEeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEE
Q 002121 681 HHKNLVGLVGFCFEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNIL 760 (964)
Q Consensus 681 ~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NIL 760 (964)
+ | +++.+++. .+..++||||+++|+|.+ +.. .+...++.|++.||+|||+.+ |+||||||+|||
T Consensus 162 ~--~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NIL 225 (282)
T 1zar_A 162 Q--G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVL 225 (282)
T ss_dssp T--T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEE
T ss_pred c--C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEE
Confidence 9 5 77777654 456799999999999998 432 224579999999999999988 999999999999
Q ss_pred ECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccc
Q 002121 761 LDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYM 803 (964)
Q Consensus 761 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 803 (964)
++ ++.+||+|||+|+. +..|+|||++.
T Consensus 226 l~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp EE-TTEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred EE-CCcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence 99 99999999999873 34578899874
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.2e-22 Score=215.36 Aligned_cols=203 Identities=14% Similarity=0.170 Sum_probs=138.4
Q ss_pred cccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhcccccc-ccCcCCcccCCCCCccEEEccc-CcccCcCCCc
Q 002121 79 KLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCG-FTGNIPDEIGNLAELSFLALNS-NNFSGRIPPS 156 (964)
Q Consensus 79 ~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~ 156 (964)
.+|. +. ++|++|+|++| .+.+..+..|.++++|++|+|++|. ++...+..|.++++|++|+|++ |++++..+..
T Consensus 25 ~ip~-~~--~~l~~L~l~~n-~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~ 100 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIET-HLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDA 100 (239)
T ss_dssp SCCC-CC--TTCCEEEEESC-CCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTS
T ss_pred ccCC-CC--CcccEEEEeCC-cceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHH
Confidence 4555 33 37889999998 6887777788889999999999996 8766666888899999999998 8898777778
Q ss_pred CCCccccccccccccccccccCcccCCCCccccccCCC---eeEccCC-cccccccccccCCCccee-EEEccCCcCccc
Q 002121 157 LGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAK---HFHFNKN-KLSGTISEQLFSPDMVLI-HVLFDGNQLSGN 231 (964)
Q Consensus 157 ~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~---~L~L~~N-~l~g~l~~~~f~~~~~L~-~L~l~~N~l~~~ 231 (964)
|.++++|++|+|++|++++ +|. +..+++|+ .|++++| +++ .++...|..+.+|+ +|++++|+++..
T Consensus 101 f~~l~~L~~L~l~~n~l~~-lp~-------~~~l~~L~~L~~L~l~~N~~l~-~i~~~~~~~l~~L~~~L~l~~n~l~~i 171 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLKM-FPD-------LTKVYSTDIFFILEITDNPYMT-SIPVNAFQGLCNETLTLKLYNNGFTSV 171 (239)
T ss_dssp EECCTTCCEEEEEEECCCS-CCC-------CTTCCBCCSEEEEEEESCTTCC-EECTTTTTTTBSSEEEEECCSCCCCEE
T ss_pred hCCCCCCCEEeCCCCCCcc-ccc-------cccccccccccEEECCCCcchh-hcCcccccchhcceeEEEcCCCCCccc
Confidence 8888899999999998884 551 45555555 7777777 666 55555566666666 666666666633
Q ss_pred CCcccCCCCCCcEEEcccCc-CccccCccccCC-CCCCeeeccCccCccCCCCCCCCCCCCEEEccCC
Q 002121 232 IPESLGYVQTLEVLRLDRNA-LTGKVPTNLNNL-TNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNN 297 (964)
Q Consensus 232 ~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N 297 (964)
.+..+.. ++|+.|+|++|+ +++..+..|.++ ++|+.|+|++|+|+++++. .+++|+.|+++++
T Consensus 172 ~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 172 QGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTTC
T ss_pred CHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccCc
Confidence 3333333 566666666663 664445556666 6666666666666554443 3445555555543
No 334
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=6.1e-22 Score=211.47 Aligned_cols=178 Identities=19% Similarity=0.179 Sum_probs=133.3
Q ss_pred CCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeec
Q 002121 192 NAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNL 271 (964)
Q Consensus 192 ~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 271 (964)
..+.++++++.++ .+|..+. ..++.|+|++|++++..+..|..+++|++|+|++|.|++..+..|.++++|++|+|
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCeEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 3445566666665 5554433 45677777777777777777788888888888888888777777888888888888
Q ss_pred cCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCccccc
Q 002121 272 AHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNN 350 (964)
Q Consensus 272 s~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 350 (964)
++|+|++.++. +..+++|++|+|++|.++ ...+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 169 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQS 169 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCC-CcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCc
Confidence 88888877665 677788888888888886 5556667778888888888888887777778888888888888888887
Q ss_pred ccCCCCccCCCCcEEeccCCccee
Q 002121 351 TLDMGNAVGPLLQLVDLQNNQISA 374 (964)
Q Consensus 351 ~~~~~~~~l~~L~~L~L~~N~l~~ 374 (964)
..+..+..+++|+.|+|++|+|++
T Consensus 170 ~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 170 VPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCTTTTTTCTTCCEEECCSCCBCT
T ss_pred cCHHHHhCCCCCCEEEeeCCceeC
Confidence 777777777888887777777764
No 335
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=6.6e-25 Score=245.13 Aligned_cols=269 Identities=15% Similarity=0.153 Sum_probs=171.2
Q ss_pred CCCCCCccEEecCCCeeEEEcCCCCccccccCCcCCC--CcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCc
Q 002121 51 DPCGSWEGVTCNNSRVTALGLSTMGLTGKLSGDIGGL--TELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGN 128 (964)
Q Consensus 51 ~~C~~w~gv~C~~~~v~~L~L~~~~l~g~~~~~l~~l--~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 128 (964)
..|..|.++.|+...++.++++++.+. +..+..+ +.|+.|+|++| .+.+..+. +..+++|++|+|++|.+++.
T Consensus 34 ~vc~~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n-~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 34 GVCKRWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRS-FMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp SSCHHHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTC-EECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCc-cccccchh-hccCCCCCEEEccCCCcCHH
Confidence 446579999888777899999999887 3456666 88999999998 67766554 66789999999999998865
Q ss_pred -CCcccCCCCCccEEEcccCcccCcCCCcCCCcccccccccccc-ccccc-cCcccCCCCccccccCCCeeEccCC-ccc
Q 002121 129 -IPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADN-QLTGS-IPVSTITSPGLDQLKNAKHFHFNKN-KLS 204 (964)
Q Consensus 129 -~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g~-iP~~~~~~~~l~~l~~L~~L~L~~N-~l~ 204 (964)
+|..+..+++|++|+|++|.+++..+..++.+++|++|+|++| .+++. +| ..+..+++|++|++++| .++
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~------~~~~~~~~L~~L~l~~~~~l~ 182 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQ------TLLSSCSRLDELNLSWCFDFT 182 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHH------HHHHHCTTCCEEECCCCTTCC
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHH------HHHhcCCCCCEEcCCCCCCcC
Confidence 7888888999999999999988777888888899999999998 67642 44 23566778888888877 776
Q ss_pred ccccccccCCCc-ceeEEEccCC--cCc-ccCCcccCCCCCCcEEEcccCc-CccccCccccCCCCCCeeeccCccCccC
Q 002121 205 GTISEQLFSPDM-VLIHVLFDGN--QLS-GNIPESLGYVQTLEVLRLDRNA-LTGKVPTNLNNLTNVNELNLAHNDLKGP 279 (964)
Q Consensus 205 g~l~~~~f~~~~-~L~~L~l~~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 279 (964)
+.-....+..++ +|++|++++| .++ +.++..+..+++|+.|+|++|. +++..+..+.++
T Consensus 183 ~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l---------------- 246 (336)
T 2ast_B 183 EKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL---------------- 246 (336)
T ss_dssp HHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGC----------------
T ss_pred hHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCC----------------
Confidence 331122233344 5555555555 233 2333344444555555555554 443444444444
Q ss_pred CCCCCCCCCCCEEEccCCC-CCCCCCCcccCCCCCCcEEECCCCccccccChhccCC-CCCCEEEcCCcccccccCCCCc
Q 002121 280 FPDLSQMNSLSYVDLSNNS-FDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSY-SQIQQVKLRNNAFNNTLDMGNA 357 (964)
Q Consensus 280 ~~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~ 357 (964)
++|++|++++|. +. ......+..+++|+.|+|++| +... .+..+ ..|+.|++++|++++..|..+.
T Consensus 247 -------~~L~~L~l~~~~~~~-~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 247 -------NYLQHLSLSRCYDII-PETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp -------TTCCEEECTTCTTCC-GGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred -------CCCCEeeCCCCCCCC-HHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCccc
Confidence 555555555543 11 111123455666666666666 2221 22222 2244555667777766665554
Q ss_pred c
Q 002121 358 V 358 (964)
Q Consensus 358 ~ 358 (964)
.
T Consensus 315 ~ 315 (336)
T 2ast_B 315 N 315 (336)
T ss_dssp S
T ss_pred c
Confidence 3
No 336
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=7e-23 Score=242.35 Aligned_cols=210 Identities=22% Similarity=0.348 Sum_probs=118.5
Q ss_pred CCCCCCCCCC----CCccE-EecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhc
Q 002121 45 TWKNSDDPCG----SWEGV-TCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILI 119 (964)
Q Consensus 45 ~W~~~~~~C~----~w~gv-~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~ 119 (964)
+|..+.++|. .|.|+ .|...+++.|+|++|++++ +|..+. ++|++|+|++| .+. .+| ..+++|++|+
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N-~l~-~ip---~~l~~L~~L~ 106 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQN-ALI-SLP---ELPASLEYLD 106 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSS-CCS-CCC---CCCTTCCEEE
T ss_pred HHhccCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCC-CCc-ccc---cccCCCCEEE
Confidence 4655666773 49999 7887889999999999986 776653 67888888877 455 344 3345555555
Q ss_pred cccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEcc
Q 002121 120 LAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFN 199 (964)
Q Consensus 120 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~ 199 (964)
|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|
T Consensus 107 Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp--------------------- 156 (571)
T 3cvr_A 107 ACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LP--------------------- 156 (571)
T ss_dssp CCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---------------------
T ss_pred ccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CC---------------------
Confidence 55555553 444 333 45555555555553 333 33444444444444441 22
Q ss_pred CCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccC
Q 002121 200 KNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGP 279 (964)
Q Consensus 200 ~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 279 (964)
. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+.+
T Consensus 157 ----------------------------------~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~l 195 (571)
T 3cvr_A 157 ----------------------------------E---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESL 195 (571)
T ss_dssp ----------------------------------C---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSC
T ss_pred ----------------------------------C---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCch
Confidence 1 22344444444444442 333 33 4444444445544433
Q ss_pred CCCCCC-----CCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCC
Q 002121 280 FPDLSQ-----MNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYS 336 (964)
Q Consensus 280 ~~~l~~-----l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 336 (964)
+. +.. ...|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+.
T Consensus 196 p~-~~~~L~~~~~~L~~L~Ls~N~l~--~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 196 PA-VPVRNHHSEETEIFFRCRENRIT--HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CC-CC--------CCEEEECCSSCCC--CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred hh-HHHhhhcccccceEEecCCCcce--ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 33 222 122377777777774 3555556677777777777777777777766543
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=5.1e-22 Score=210.40 Aligned_cols=197 Identities=16% Similarity=0.092 Sum_probs=130.3
Q ss_pred CCCeeEccCCcccccccccccCCCcceeEEEccCCc-CcccCCcccCCCCCCcEEEccc-CcCccccCccccCCCCCCee
Q 002121 192 NAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQ-LSGNIPESLGYVQTLEVLRLDR-NALTGKVPTNLNNLTNVNEL 269 (964)
Q Consensus 192 ~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 269 (964)
+|++|++++|+++ .++...|..+++|++|++++|+ +++..+..|..+++|++|+|++ |++++..+..|.++++|++|
T Consensus 32 ~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 4555555555554 4444455555666666666664 5555555666777777777776 77775555667777777777
Q ss_pred eccCccCccCCCCCCCCCCCC---EEEccCC-CCCCCCCCcccCCCCCCc-EEECCCCccccccChhccCCCCCCEEEcC
Q 002121 270 NLAHNDLKGPFPDLSQMNSLS---YVDLSNN-SFDPTEAPLWFSTLPSLT-TLICEFGSLQGRVPDKLFSYSQIQQVKLR 344 (964)
Q Consensus 270 ~Ls~N~l~~~~~~l~~l~~L~---~L~Ls~N-~l~~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 344 (964)
+|++|.+++++. +..+++|+ +|++++| .++ ...+..|.++++|+ .|+|++|+++...+..|.. ++|+.|+|+
T Consensus 111 ~l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~-~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMT-SIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCC-EECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCccccc-cccccccccccEEECCCCcchh-hcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 777777776443 66666666 7777777 665 44555677777777 7777777777444444444 677777777
Q ss_pred Ccc-cccccCCCCccC-CCCcEEeccCCcceeeccCCCcccceeEeecCC
Q 002121 345 NNA-FNNTLDMGNAVG-PLLQLVDLQNNQISAITLGSGIKNYTLILVGNP 392 (964)
Q Consensus 345 ~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~i~~~~~~~l~~l~l~~Np 392 (964)
+|+ ++...+..|..+ ++|+.|+|++|+|+.++...+..+..|.+.+++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIARNTW 237 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCTTCTTCSEEECTTC-
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccccCChhHhccCceeeccCcc
Confidence 774 777777777777 777777777777777777666667777776654
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=2.5e-24 Score=243.16 Aligned_cols=105 Identities=23% Similarity=0.181 Sum_probs=58.8
Q ss_pred EEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCC----CCCCCcc-cchhhccccccccCcCCcccCCC-----CC
Q 002121 69 LGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLS----PRIGDLQ-KLNILILAGCGFTGNIPDEIGNL-----AE 138 (964)
Q Consensus 69 L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p----~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~~ 138 (964)
.+|+.++++|.+|..+...++|++|||++| .+.+..+ ..|..++ +|++|+|++|.|++..+..+..+ ++
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n-~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLN-NLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTS-CGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCC-CCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 456666666666665555555666666666 4554444 4445555 56666666666655545444443 55
Q ss_pred ccEEEcccCcccCcCCCcCCCc-----cccccccccccccc
Q 002121 139 LSFLALNSNNFSGRIPPSLGKL-----SQLYWLDLADNQLT 174 (964)
Q Consensus 139 L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~ 174 (964)
|++|+|++|.+++..+..+... ++|++|+|++|+++
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 122 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFS 122 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCC
Confidence 6666666666554444433222 45555555555554
No 339
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=6e-22 Score=218.27 Aligned_cols=217 Identities=24% Similarity=0.342 Sum_probs=135.8
Q ss_pred cccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCcccccc
Q 002121 112 LQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLK 191 (964)
Q Consensus 112 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~ 191 (964)
+.++..+.+..+.++..++ +..+++|++|++++|.++. +| .+..+++|++|+|++|++++ +| .+..++
T Consensus 18 l~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~-------~~~~l~ 85 (308)
T 1h6u_A 18 LANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LA-------PLKNLT 85 (308)
T ss_dssp HHHHHHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CG-------GGTTCC
T ss_pred HHHHHHHHhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Ch-------hHccCC
Confidence 4455566666666664332 4567778888888887773 44 57777777777777777762 22 155566
Q ss_pred CCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeec
Q 002121 192 NAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNL 271 (964)
Q Consensus 192 ~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 271 (964)
+|++|+|++|++++ ++ .+..+++|+.|+|++|++++. +. +..+++|++|+|
T Consensus 86 ~L~~L~L~~n~l~~-~~--------------------------~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 86 KITELELSGNPLKN-VS--------------------------AIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLYL 136 (308)
T ss_dssp SCCEEECCSCCCSC-CG--------------------------GGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEEC
T ss_pred CCCEEEccCCcCCC-ch--------------------------hhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEEC
Confidence 66666666666552 21 345555666666666666532 22 556666666666
Q ss_pred cCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccc
Q 002121 272 AHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNT 351 (964)
Q Consensus 272 s~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 351 (964)
++|.+++.++ +..+++|++|+|++|.++ . .+. +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++.
T Consensus 137 ~~n~l~~~~~-l~~l~~L~~L~l~~n~l~-~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 137 DLNQITNISP-LAGLTNLQYLSIGNAQVS-D-LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp CSSCCCCCGG-GGGCTTCCEEECCSSCCC-C-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBC
T ss_pred CCCccCcCcc-ccCCCCccEEEccCCcCC-C-Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcc
Confidence 6666655444 556666666666666664 2 222 6666677777777777665443 66777777777777777766
Q ss_pred cCCCCccCCCCcEEeccCCcceeecc
Q 002121 352 LDMGNAVGPLLQLVDLQNNQISAITL 377 (964)
Q Consensus 352 ~~~~~~~l~~L~~L~L~~N~l~~i~~ 377 (964)
.+ +..+++|+.|+|++|+++..+.
T Consensus 211 ~~--l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 211 SP--LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp GG--GTTCTTCCEEEEEEEEEECCCE
T ss_pred cc--ccCCCCCCEEEccCCeeecCCe
Confidence 53 6677777777777777776554
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=9.4e-24 Score=238.41 Aligned_cols=259 Identities=17% Similarity=0.163 Sum_probs=203.3
Q ss_pred EEecccCCCCCCCCCCCCCCcccchhhccccccccCcCC----cccCCCC-CccEEEcccCcccCcCCCcCCCc-----c
Q 002121 92 SLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIP----DEIGNLA-ELSFLALNSNNFSGRIPPSLGKL-----S 161 (964)
Q Consensus 92 ~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~ 161 (964)
+++|++| .+.+.+|..+....+|++|+|++|.|++..+ ..|.+++ +|++|+|++|.+++..+..|..+ +
T Consensus 2 ~~~ls~n-~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLH-PGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCC-TTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccc-cchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 4688899 7999998888888889999999999997666 7788898 89999999999998878777776 8
Q ss_pred ccccccccccccccccCcccCCCCccccc-cCCCeeEccCCcccccccccc---cCC-CcceeEEEccCCcCcccCC---
Q 002121 162 QLYWLDLADNQLTGSIPVSTITSPGLDQL-KNAKHFHFNKNKLSGTISEQL---FSP-DMVLIHVLFDGNQLSGNIP--- 233 (964)
Q Consensus 162 ~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l-~~L~~L~L~~N~l~g~l~~~~---f~~-~~~L~~L~l~~N~l~~~~p--- 233 (964)
+|++|+|++|++++..+..+. ..+..+ ++|++|+|++|++++..+..+ +.. ..+|++|++++|+|++..+
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~--~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 158 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELV--KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL 158 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHH--HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH
T ss_pred CccEEECcCCcCChHHHHHHH--HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH
Confidence 999999999999855442110 123444 899999999999985444333 333 4689999999999996443
Q ss_pred -cccCCCC-CCcEEEcccCcCccccCcccc----CC-CCCCeeeccCccCccCC-----CCCCC-CCCCCEEEccCCCCC
Q 002121 234 -ESLGYVQ-TLEVLRLDRNALTGKVPTNLN----NL-TNVNELNLAHNDLKGPF-----PDLSQ-MNSLSYVDLSNNSFD 300 (964)
Q Consensus 234 -~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~-----~~l~~-l~~L~~L~Ls~N~l~ 300 (964)
..+..++ +|+.|+|++|+|++..+..+. .+ ++|++|+|++|.|++.. ..+.. .++|++|+|++|.++
T Consensus 159 ~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 238 (362)
T 3goz_A 159 IQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLH 238 (362)
T ss_dssp HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCC
T ss_pred HHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCC
Confidence 4445555 999999999999977765444 44 69999999999999832 23444 469999999999997
Q ss_pred CCCC---CcccCCCCCCcEEECCCCcccccc-------ChhccCCCCCCEEEcCCcccccccC
Q 002121 301 PTEA---PLWFSTLPSLTTLICEFGSLQGRV-------PDKLFSYSQIQQVKLRNNAFNNTLD 353 (964)
Q Consensus 301 ~~~~---~~~~~~l~~L~~L~Ls~N~l~~~~-------p~~~~~l~~L~~L~L~~N~l~~~~~ 353 (964)
.... ...+..+++|+.|+|++|.+.+.. +..+..+++|+.|+|++|++....+
T Consensus 239 ~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 239 GPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp CCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 3222 345678899999999999955443 3467788999999999999987644
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=1.4e-21 Score=215.32 Aligned_cols=196 Identities=25% Similarity=0.401 Sum_probs=123.8
Q ss_pred CCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccc
Q 002121 109 IGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLD 188 (964)
Q Consensus 109 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~ 188 (964)
+..+++|++|++++|.++ .+| .+..+++|++|+|++|.+++..+ +.++++|++|+|++|++++ +| .+.
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-------~~~ 104 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-------AIA 104 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-------GGT
T ss_pred HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-------hhc
Confidence 456777777777777777 445 57777888888888888875433 7778888888888888773 22 466
Q ss_pred cccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCe
Q 002121 189 QLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNE 268 (964)
Q Consensus 189 ~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 268 (964)
.+++|++|++++|++++ ++. +..+++|+.|+|++|.+++..+ +..+++|++
T Consensus 105 ~l~~L~~L~l~~n~l~~-~~~--------------------------l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~ 155 (308)
T 1h6u_A 105 GLQSIKTLDLTSTQITD-VTP--------------------------LAGLSNLQVLYLDLNQITNISP--LAGLTNLQY 155 (308)
T ss_dssp TCTTCCEEECTTSCCCC-CGG--------------------------GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCE
T ss_pred CCCCCCEEECCCCCCCC-chh--------------------------hcCCCCCCEEECCCCccCcCcc--ccCCCCccE
Confidence 67777777777777662 221 4444555555555555553322 555555555
Q ss_pred eeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCccc
Q 002121 269 LNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAF 348 (964)
Q Consensus 269 L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 348 (964)
|+|++|.+++..+ +..+++|++|++++|.++ . .+. +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++
T Consensus 156 L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~-~-~~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 156 LSIGNAQVSDLTP-LANLSKLTTLKADDNKIS-D-ISP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTI 229 (308)
T ss_dssp EECCSSCCCCCGG-GTTCTTCCEEECCSSCCC-C-CGG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEE
T ss_pred EEccCCcCCCChh-hcCCCCCCEEECCCCccC-c-Chh-hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCee
Confidence 5555555555444 555566666666666664 2 222 5666677777777777765543 67777777777777777
Q ss_pred ccc
Q 002121 349 NNT 351 (964)
Q Consensus 349 ~~~ 351 (964)
++.
T Consensus 230 ~~~ 232 (308)
T 1h6u_A 230 TNQ 232 (308)
T ss_dssp ECC
T ss_pred ecC
Confidence 653
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=9.5e-24 Score=240.64 Aligned_cols=67 Identities=25% Similarity=0.269 Sum_probs=28.7
Q ss_pred cCCCCCCcEEECCCCccccc----cChhccC--CCCCCEEEcCCccccc----ccCCCC-ccCCCCcEEeccCCccee
Q 002121 308 FSTLPSLTTLICEFGSLQGR----VPDKLFS--YSQIQQVKLRNNAFNN----TLDMGN-AVGPLLQLVDLQNNQISA 374 (964)
Q Consensus 308 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~--l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~L~~N~l~~ 374 (964)
+..+++|+.|+|++|+|++. ++..+.. +++|+.|+|++|++++ .++..+ ..+++|+.|+|++|+++.
T Consensus 240 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 33444444444444444433 2333322 4444444444444444 233222 334455555555555443
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=1.2e-23 Score=239.64 Aligned_cols=243 Identities=16% Similarity=0.210 Sum_probs=154.6
Q ss_pred CCCCCCCCcccchhhccccccccCc----CCcccCCCCCccEEEcccC---cccCcCCCcC-------CCcccccccccc
Q 002121 104 SLSPRIGDLQKLNILILAGCGFTGN----IPDEIGNLAELSFLALNSN---NFSGRIPPSL-------GKLSQLYWLDLA 169 (964)
Q Consensus 104 ~~p~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls 169 (964)
.++..+..+++|++|+|++|.|++. ++..+..+++|++|+|++| ++++.+|..+ .++++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 4455566677788888888877755 3334667778888888775 4444555444 567777778888
Q ss_pred cccccc----ccCcccCCCCccccccCCCeeEccCCccccccccccc---CCC---------cceeEEEccCCcCc-ccC
Q 002121 170 DNQLTG----SIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLF---SPD---------MVLIHVLFDGNQLS-GNI 232 (964)
Q Consensus 170 ~N~l~g----~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f---~~~---------~~L~~L~l~~N~l~-~~~ 232 (964)
+|.+++ .+| ..+..+++|++|+|++|.+++..+..+. ..+ ++|++|++++|+++ +.+
T Consensus 103 ~n~l~~~~~~~l~------~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~ 176 (386)
T 2ca6_A 103 DNAFGPTAQEPLI------DFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSM 176 (386)
T ss_dssp SCCCCTTTHHHHH------HHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGH
T ss_pred CCcCCHHHHHHHH------HHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHH
Confidence 777774 244 3456677777777777777533222221 112 56777777777776 333
Q ss_pred C---cccCCCCCCcEEEcccCcCc--c---ccCccccCCCCCCeeeccCccCc----c-CCCCCCCCCCCCEEEccCCCC
Q 002121 233 P---ESLGYVQTLEVLRLDRNALT--G---KVPTNLNNLTNVNELNLAHNDLK----G-PFPDLSQMNSLSYVDLSNNSF 299 (964)
Q Consensus 233 p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~-~~~~l~~l~~L~~L~Ls~N~l 299 (964)
+ ..+..+++|+.|+|++|+|+ | .++..+..+++|+.|+|++|.|+ + ++..+..+++|++|+|++|.+
T Consensus 177 ~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i 256 (386)
T 2ca6_A 177 KEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLL 256 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred HHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCC
Confidence 3 35556677777777777776 2 34446677777777777777774 2 223366677777777777777
Q ss_pred CCC---CCCccc--CCCCCCcEEECCCCcccc----ccChhc-cCCCCCCEEEcCCccccccc
Q 002121 300 DPT---EAPLWF--STLPSLTTLICEFGSLQG----RVPDKL-FSYSQIQQVKLRNNAFNNTL 352 (964)
Q Consensus 300 ~~~---~~~~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~~ 352 (964)
+.. .++..+ ..+++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|++++..
T Consensus 257 ~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 257 SARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred chhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 521 023344 336777777777777776 366665 45677777777777776554
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=7.4e-21 Score=213.58 Aligned_cols=248 Identities=12% Similarity=0.038 Sum_probs=117.3
Q ss_pred hhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCe
Q 002121 116 NILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKH 195 (964)
Q Consensus 116 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~ 195 (964)
++++.++++++ .+|..+ .++|++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|. ..|.++++|.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~-----~~f~~L~~l~~ 83 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA-----DVFSNLPKLHE 83 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT-----TSBCSCTTCCE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh-----hHhhcchhhhh
Confidence 34566666666 566555 24677777777777744445667777777777777766544442 23444444443
Q ss_pred -eEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEccc-CcCccccCccccCCC-CCCeeecc
Q 002121 196 -FHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDR-NALTGKVPTNLNNLT-NVNELNLA 272 (964)
Q Consensus 196 -L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~-~L~~L~Ls 272 (964)
+.++.|+++ .++...|..+++|++|++++|+|++..+..+....++..|++.+ |.++...+..|..+. .|+.|+|+
T Consensus 84 ~l~~~~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~ 162 (350)
T 4ay9_X 84 IRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLN 162 (350)
T ss_dssp EEEEEETTCC-EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECC
T ss_pred hhcccCCccc-ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccc
Confidence 333344444 33333444444444444444444433333333333444444432 333333333333332 24444444
Q ss_pred CccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCC-CccccccChhccCCCCCCEEEcCCcccccc
Q 002121 273 HNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEF-GSLQGRVPDKLFSYSQIQQVKLRNNAFNNT 351 (964)
Q Consensus 273 ~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 351 (964)
+|+|+.+++..... .+|+.|++++ |.++.+.+..|.++++|++|+|++|+|+.+
T Consensus 163 ~N~i~~i~~~~f~~-------------------------~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 163 KNGIQEIHNSAFNG-------------------------TQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp SSCCCEECTTSSTT-------------------------EEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred cccccCCChhhccc-------------------------cchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 44444443333333 3444444442 333333333445555555555555555544
Q ss_pred cCCCCccCCCCcEEeccCCcceeecc-CCCcccceeEeecCCccccccc
Q 002121 352 LDMGNAVGPLLQLVDLQNNQISAITL-GSGIKNYTLILVGNPVCTATLA 399 (964)
Q Consensus 352 ~~~~~~~l~~L~~L~L~~N~l~~i~~-~~~~~l~~l~l~~Np~c~~~l~ 399 (964)
++..+..+++|+.+++ ++++.+|. ..+..+..+++..+..|+|...
T Consensus 218 p~~~~~~L~~L~~l~~--~~l~~lP~l~~l~~L~~l~l~~~~~c~~~~~ 264 (350)
T 4ay9_X 218 PSYGLENLKKLRARST--YNLKKLPTLEKLVALMEASLTYPSHCCAFAN 264 (350)
T ss_dssp CSSSCTTCCEEECTTC--TTCCCCCCTTTCCSCCEEECSCHHHHHHHHH
T ss_pred ChhhhccchHhhhccC--CCcCcCCCchhCcChhhCcCCCCccccchhh
Confidence 4444433333333222 33444442 3344455566654446765443
No 345
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=6.2e-23 Score=229.10 Aligned_cols=250 Identities=16% Similarity=0.168 Sum_probs=161.0
Q ss_pred chhhccccccccCcCCcccCCC--CCccEEEcccCcccCcCCCcCCCccccccccccccccccc-cCcccCCCCcccccc
Q 002121 115 LNILILAGCGFTGNIPDEIGNL--AELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGS-IPVSTITSPGLDQLK 191 (964)
Q Consensus 115 L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~-iP~~~~~~~~l~~l~ 191 (964)
++.|++++|.+. |..+..+ ++|+.|++++|.+.+..+. +.++++|++|+|++|.+++. +| ..+..++
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~------~~~~~~~ 118 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLH------GILSQCS 118 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHH------HHHTTBC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHH------HHHhhCC
Confidence 334444444443 2333444 4555555555555544333 33455555555555555433 33 2244455
Q ss_pred CCCeeEccCCcccccccccccCCCcceeEEEccCC-cCcc-cCCcccCCCCCCcEEEcccC-cCccc-cCccccCCC-CC
Q 002121 192 NAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGN-QLSG-NIPESLGYVQTLEVLRLDRN-ALTGK-VPTNLNNLT-NV 266 (964)
Q Consensus 192 ~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N-~l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L 266 (964)
+|++|+|++|.+++..+.. +..+++|++|++++| .+++ .++..+..+++|+.|++++| .+++. ++..+..++ +|
T Consensus 119 ~L~~L~L~~~~l~~~~~~~-l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L 197 (336)
T 2ast_B 119 KLQNLSLEGLRLSDPIVNT-LAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETI 197 (336)
T ss_dssp CCSEEECTTCBCCHHHHHH-HTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTC
T ss_pred CCCEEeCcCcccCHHHHHH-HhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCC
Confidence 5555555555555444332 333566666666666 4554 25556777888888888888 88854 577788888 89
Q ss_pred CeeeccCc--cCc--cCCCCCCCCCCCCEEEccCCC-CCCCCCCcccCCCCCCcEEECCCCc-cccccChhccCCCCCCE
Q 002121 267 NELNLAHN--DLK--GPFPDLSQMNSLSYVDLSNNS-FDPTEAPLWFSTLPSLTTLICEFGS-LQGRVPDKLFSYSQIQQ 340 (964)
Q Consensus 267 ~~L~Ls~N--~l~--~~~~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~ 340 (964)
++|+|++| .++ +.+..+..+++|++|++++|. ++ ...+..+..+++|+.|+|++|. +.......+..+++|+.
T Consensus 198 ~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~-~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~ 276 (336)
T 2ast_B 198 TQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLK-NDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKT 276 (336)
T ss_dssp CEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCC-GGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred CEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCC-HHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCE
Confidence 99999988 444 233346678899999999998 55 4556678999999999999995 44333346889999999
Q ss_pred EEcCCcccccccCCCCccC-CCCcEEeccCCcceeeccCCC
Q 002121 341 VKLRNNAFNNTLDMGNAVG-PLLQLVDLQNNQISAITLGSG 380 (964)
Q Consensus 341 L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~i~~~~~ 380 (964)
|+|++| ++ ...+..+ ..|+.|++++|+++.+.....
T Consensus 277 L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 277 LQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp EECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred EeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcc
Confidence 999999 33 3344444 347888899999998765543
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=3.8e-21 Score=215.96 Aligned_cols=218 Identities=13% Similarity=0.105 Sum_probs=139.8
Q ss_pred cEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCccee
Q 002121 140 SFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLI 219 (964)
Q Consensus 140 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~ 219 (964)
++++.++|+++ .+|..+. ++|++|+|++|+|+ .||. ..|.++++|++|+|++|++.+.+|..+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~-~i~~-----~~f~~l~~L~~L~Ls~N~i~~~i~~~~-------- 74 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLR-VIQK-----GAFSGFGDLEKIEISQNDVLEVIEADV-------- 74 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCS-EECT-----TSSTTCTTCCEEEEECCTTCCEECTTS--------
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCC-CcCH-----HHHcCCCCCCEEECcCCCCCCccChhH--------
Confidence 34556666666 4554442 35566666666665 3331 234455555555555555443444444
Q ss_pred EEEccCCcCcccCCcccCCCCCCc-EEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccC-
Q 002121 220 HVLFDGNQLSGNIPESLGYVQTLE-VLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSN- 296 (964)
Q Consensus 220 ~L~l~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~- 296 (964)
|.++++|. .+.++.|+|+...|..|.++++|++|++++|+|+..++. +....++..|++.+
T Consensus 75 ----------------f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~ 138 (350)
T 4ay9_X 75 ----------------FSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN 138 (350)
T ss_dssp ----------------BCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC
T ss_pred ----------------hhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc
Confidence 44555543 244455566655555666666666666666666655443 44455566666654
Q ss_pred CCCCCCCCCcccCCCC-CCcEEECCCCccccccChhccCCCCCCEEEcCC-cccccccCCCCccCCCCcEEeccCCccee
Q 002121 297 NSFDPTEAPLWFSTLP-SLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRN-NAFNNTLDMGNAVGPLLQLVDLQNNQISA 374 (964)
Q Consensus 297 N~l~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (964)
|.+. ...+..|..+. .++.|+|++|+|+.+.+..| ...+|+.|++++ |.++.+.+..|..+++|+.|||++|+|+.
T Consensus 139 ~~i~-~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~ 216 (350)
T 4ay9_X 139 INIH-TIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS 216 (350)
T ss_dssp TTCC-EECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCC
T ss_pred cccc-cccccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCc
Confidence 4453 44445566664 58889999999986555444 567899999985 77887777889999999999999999999
Q ss_pred eccCCCcccceeEeecCC
Q 002121 375 ITLGSGIKNYTLILVGNP 392 (964)
Q Consensus 375 i~~~~~~~l~~l~l~~Np 392 (964)
+|...+..+..|.+.+++
T Consensus 217 lp~~~~~~L~~L~~l~~~ 234 (350)
T 4ay9_X 217 LPSYGLENLKKLRARSTY 234 (350)
T ss_dssp CCSSSCTTCCEEECTTCT
T ss_pred cChhhhccchHhhhccCC
Confidence 999888888888877765
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=6e-21 Score=197.54 Aligned_cols=183 Identities=22% Similarity=0.251 Sum_probs=130.4
Q ss_pred CCCccEEecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCccc
Q 002121 54 GSWEGVTCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEI 133 (964)
Q Consensus 54 ~~w~gv~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~ 133 (964)
|.|.+|.|+...++ .+|..+ .++|++|+|++| .+.+..+..|..+++|++|+|++|++++..+..|
T Consensus 7 C~~~~v~c~~~~l~-----------~~p~~~--~~~l~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 72 (208)
T 2o6s_A 7 CSGTTVECYSQGRT-----------SVPTGI--PAQTTYLDLETN-SLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVF 72 (208)
T ss_dssp EETTEEECCSSCCS-----------SCCSCC--CTTCSEEECCSS-CCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT
T ss_pred ECCCEEEecCCCcc-----------CCCCCC--CCCCcEEEcCCC-ccCcCChhhhcccccCcEEECCCCccCccChhhc
Confidence 68999998754433 233333 457889999998 6877767778888889999999888886666667
Q ss_pred CCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccC
Q 002121 134 GNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFS 213 (964)
Q Consensus 134 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~ 213 (964)
..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+ ..+..+++|++|++++|+++ .++...|.
T Consensus 73 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~------~~~~~l~~L~~L~l~~N~l~-~~~~~~~~ 145 (208)
T 2o6s_A 73 NKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPD------GVFDKLTQLKDLRLYQNQLK-SVPDGVFD 145 (208)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT------TTTTTCTTCCEEECCSSCCS-CCCTTTTT
T ss_pred CCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCH------hHhccCCcCCEEECCCCccc-eeCHHHhc
Confidence 888889999999888886666678888888888888888873222 34566777777777777776 45555566
Q ss_pred CCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCC
Q 002121 214 PDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLT 264 (964)
Q Consensus 214 ~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 264 (964)
.+++|++|++++|.+.+ .+++|++|+++.|+++|.+|..++.++
T Consensus 146 ~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 146 RLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp TCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred cCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 66666666666665552 344566666666666666666665544
No 348
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=7.5e-21 Score=214.46 Aligned_cols=202 Identities=25% Similarity=0.264 Sum_probs=131.5
Q ss_pred EEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCcccc-CCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCC
Q 002121 220 HVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLN-NLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNN 297 (964)
Q Consensus 220 ~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N 297 (964)
.+++++|+|+ .+|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|+++++. +..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 3445555554 2443332 3466666666666655555565 666666666666666666653 666677777777777
Q ss_pred CCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCC---ccCCCCcEEeccCCccee
Q 002121 298 SFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGN---AVGPLLQLVDLQNNQISA 374 (964)
Q Consensus 298 ~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~ 374 (964)
+|+ ...+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+ ..+++|+.|+|++|+|+.
T Consensus 99 ~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 99 HLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp CCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred cCC-cCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 765 4555567777777777777777777777778888888888888888877666555 567888888888888888
Q ss_pred eccCCCcc-----cceeEeecCC-ccccccccc-CccccCCCCCcccccccccCCCCC
Q 002121 375 ITLGSGIK-----NYTLILVGNP-VCTATLANT-NYCQLQQPTTKAYSTSLANCGGKS 425 (964)
Q Consensus 375 i~~~~~~~-----l~~l~l~~Np-~c~~~l~~~-~~~~~~~~~~~~~~~~~~~c~~~~ 425 (964)
++...+.. +..|+|.+|| .|+|.+... ..|................|..|.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l~~~~~~~~~~~~~~~~~~~~~~~C~~p~ 235 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVMDFQEDLYCMHSK 235 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEECCHHHHHHHHHHHHTTCHHHHTTGGGCEEESSS
T ss_pred cCHHHhhhccHhhcceEEecCCCccCCcCcHHHHHHHHHhcCCchhccCcCCEeCCCh
Confidence 77543222 3668999999 899998763 556433322111122345666654
No 349
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.82 E-value=1.1e-22 Score=245.51 Aligned_cols=319 Identities=10% Similarity=0.014 Sum_probs=190.8
Q ss_pred eeEEEcCCCC-ccc-cccCCcCCCCcccEEecccCCCCCCC----CCCCCCCcccchhhcccccccc----CcCCcccCC
Q 002121 66 VTALGLSTMG-LTG-KLSGDIGGLTELRSLDLSYNGGLTGS----LSPRIGDLQKLNILILAGCGFT----GNIPDEIGN 135 (964)
Q Consensus 66 v~~L~L~~~~-l~g-~~~~~l~~l~~L~~L~L~~N~~l~~~----~p~~l~~l~~L~~L~L~~n~l~----~~~p~~~~~ 135 (964)
++.|+|+++. ++. .++..+..+++|++|+|++| .+.+. ++..+..+++|++|+|++|.++ +.++..+.+
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~-~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEES-SFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTC-EEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccc-cccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 6666666654 111 12222235566666666666 34333 2223344556666666666655 223333445
Q ss_pred CCCccEEEcccCcccCcCCCcCCCccccccccc---------------------------cccccccccCcccCCCCccc
Q 002121 136 LAELSFLALNSNNFSGRIPPSLGKLSQLYWLDL---------------------------ADNQLTGSIPVSTITSPGLD 188 (964)
Q Consensus 136 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L---------------------------s~N~l~g~iP~~~~~~~~l~ 188 (964)
+++|++|+|++|.+.+ +|..+.++++|++|++ +++... .+| ..+.
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~------~~~~ 290 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMP------ILFP 290 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGG------GGGG
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHH------HHHh
Confidence 5666666666665553 3344444444444444 443221 233 2345
Q ss_pred cccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcc-----------cCcCccc-c
Q 002121 189 QLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLD-----------RNALTGK-V 256 (964)
Q Consensus 189 ~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls-----------~N~l~~~-~ 256 (964)
.+++|++|+|++|.+++.....++..+++|++|+++++-..+.++..+..+++|+.|+|+ .|.+++. +
T Consensus 291 ~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~ 370 (592)
T 3ogk_B 291 FAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGL 370 (592)
T ss_dssp GGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHH
T ss_pred hcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHH
Confidence 677888888888877655444556677788888887333233334444567788888888 3566643 2
Q ss_pred CccccCCCCCCeeeccCccCccCCCC-CC-CCCCCCEEEcc----CCCCCCC----CCCcccCCCCCCcEEECCCCc--c
Q 002121 257 PTNLNNLTNVNELNLAHNDLKGPFPD-LS-QMNSLSYVDLS----NNSFDPT----EAPLWFSTLPSLTTLICEFGS--L 324 (964)
Q Consensus 257 p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~-~l~~L~~L~Ls----~N~l~~~----~~~~~~~~l~~L~~L~Ls~N~--l 324 (964)
+..+..+++|++|+|+.|.+++.... +. .+++|+.|+++ .|.+++. .++..+.++++|+.|+|++|. +
T Consensus 371 ~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l 450 (592)
T 3ogk_B 371 IALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGL 450 (592)
T ss_dssp HHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGC
T ss_pred HHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCc
Confidence 33345578888888888887764332 33 37788888886 6677522 123336678888888887543 6
Q ss_pred ccccChhcc-CCCCCCEEEcCCccccccc-CCCCccCCCCcEEeccCCcceeecc----CCCcccceeEeecCCc
Q 002121 325 QGRVPDKLF-SYSQIQQVKLRNNAFNNTL-DMGNAVGPLLQLVDLQNNQISAITL----GSGIKNYTLILVGNPV 393 (964)
Q Consensus 325 ~~~~p~~~~-~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~i~~----~~~~~l~~l~l~~Np~ 393 (964)
++..+..+. .+++|+.|+|++|++++.. +..+..+++|+.|+|++|+++.... .....++.|+|++|++
T Consensus 451 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 451 TDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRA 525 (592)
T ss_dssp CHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBC
T ss_pred cHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcC
Confidence 666555554 3788999999988887633 3344677889999999998764322 2345678888888874
No 350
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.81 E-value=3.3e-22 Score=241.13 Aligned_cols=304 Identities=13% Similarity=0.066 Sum_probs=220.5
Q ss_pred CCeeEEEcCCCCcccc----ccCCcCCCCcccEEecccCCCCC----CCCCCCCCCcccchhhccccccccCcCCcccCC
Q 002121 64 SRVTALGLSTMGLTGK----LSGDIGGLTELRSLDLSYNGGLT----GSLSPRIGDLQKLNILILAGCGFTGNIPDEIGN 135 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~----~~~~l~~l~~L~~L~L~~N~~l~----~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 135 (964)
.+++.|+|++|.+++. ++..+..+++|++|+|++| .+. +.++..+.++++|++|+|++|.+.+ +|..+..
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n-~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMT-EFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTC-CCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeecc-CCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 5788888888877654 3344566778888888877 555 2334445567778888888877763 4445555
Q ss_pred CCCccEEEcc---------------------------cCcccCcCCCcCCCccccccccccccccccccCcccCCCCccc
Q 002121 136 LAELSFLALN---------------------------SNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLD 188 (964)
Q Consensus 136 l~~L~~L~Ls---------------------------~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~ 188 (964)
+++|+.|+++ ++.. +.+|..+..+++|++|+|++|.+++.... ..+.
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~-----~~~~ 315 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHC-----TLIQ 315 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHH-----HHHT
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHH-----HHHH
Confidence 5555555554 4322 24566777889999999999998744321 1256
Q ss_pred cccCCCeeEccCCcccccccccccCCCcceeEEEcc-----------CCcCcccCC-cccCCCCCCcEEEcccCcCcccc
Q 002121 189 QLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFD-----------GNQLSGNIP-ESLGYVQTLEVLRLDRNALTGKV 256 (964)
Q Consensus 189 ~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~-----------~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~ 256 (964)
.+++|+.|+++ |.+.......++..+++|++|+++ .|.+++... ..+..+++|+.|+++.|.+++..
T Consensus 316 ~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~ 394 (592)
T 3ogk_B 316 KCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNES 394 (592)
T ss_dssp TCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHH
T ss_pred hCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHH
Confidence 88999999999 555544444555667889999999 367765422 22456899999999999999887
Q ss_pred CccccC-CCCCCeeecc----CccCccCCCC------CCCCCCCCEEEccCCC--CCCCCCCcccCCCCCCcEEECCCCc
Q 002121 257 PTNLNN-LTNVNELNLA----HNDLKGPFPD------LSQMNSLSYVDLSNNS--FDPTEAPLWFSTLPSLTTLICEFGS 323 (964)
Q Consensus 257 p~~~~~-l~~L~~L~Ls----~N~l~~~~~~------l~~l~~L~~L~Ls~N~--l~~~~~~~~~~~l~~L~~L~Ls~N~ 323 (964)
+..+.. +++|+.|+|+ .|.+++.+.+ +.++++|++|+|++|. ++..........+++|+.|+|++|+
T Consensus 395 ~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~ 474 (592)
T 3ogk_B 395 LESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVG 474 (592)
T ss_dssp HHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCC
T ss_pred HHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCC
Confidence 777776 9999999996 7788875432 5678999999998544 6533333333458999999999999
Q ss_pred cccc-cChhccCCCCCCEEEcCCcccccccC-CCCccCCCCcEEeccCCcceeec
Q 002121 324 LQGR-VPDKLFSYSQIQQVKLRNNAFNNTLD-MGNAVGPLLQLVDLQNNQISAIT 376 (964)
Q Consensus 324 l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~i~ 376 (964)
+++. ++..+.++++|++|+|++|++++... .....+++|+.|+|++|+++...
T Consensus 475 l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~ 529 (592)
T 3ogk_B 475 ESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTG 529 (592)
T ss_dssp SSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTC
T ss_pred CCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHH
Confidence 9874 45566889999999999999876533 33457899999999999988654
No 351
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.1e-19 Score=189.64 Aligned_cols=161 Identities=19% Similarity=0.264 Sum_probs=104.7
Q ss_pred EEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCC
Q 002121 221 VLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSF 299 (964)
Q Consensus 221 L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l 299 (964)
+++++|+++ .+|..+. ++|+.|+|++|.|++..+..|.++++|++|+|++|+|+++.+ .+.++++|++|+|++|.|
T Consensus 16 v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 16 VDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 444444444 3343332 456666666666665555566666666666666666666544 366666666666666666
Q ss_pred CCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCC
Q 002121 300 DPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGS 379 (964)
Q Consensus 300 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~ 379 (964)
+ ...+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|
T Consensus 93 ~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~------- 164 (220)
T 2v9t_B 93 T-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF------- 164 (220)
T ss_dssp C-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE-------
T ss_pred C-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc-------
Confidence 5 44455566777777777777777777777777777777777777777777766677777666666555544
Q ss_pred CcccceeEeecCCcccccccccCccc
Q 002121 380 GIKNYTLILVGNPVCTATLANTNYCQ 405 (964)
Q Consensus 380 ~~~l~~l~l~~Np~c~~~l~~~~~~~ 405 (964)
.|+|.+.++..|.
T Consensus 165 -------------~c~c~l~~l~~~l 177 (220)
T 2v9t_B 165 -------------ICDCHLKWLADYL 177 (220)
T ss_dssp -------------ECSGGGHHHHHHH
T ss_pred -------------CCCCccHHHHHHH
Confidence 5889888877773
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=7.9e-20 Score=189.10 Aligned_cols=179 Identities=24% Similarity=0.296 Sum_probs=110.6
Q ss_pred hhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCee
Q 002121 117 ILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHF 196 (964)
Q Consensus 117 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L 196 (964)
.++++++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|+++
T Consensus 11 ~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---------------------- 65 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ---------------------- 65 (208)
T ss_dssp EEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC----------------------
T ss_pred EEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC----------------------
Confidence 3444555554 344333 235666666666666544445556666666666666555
Q ss_pred EccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccC
Q 002121 197 HFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDL 276 (964)
Q Consensus 197 ~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 276 (964)
.++...|..+++|++|++++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|++
T Consensus 66 ---------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 136 (208)
T 2o6s_A 66 ---------SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136 (208)
T ss_dssp ---------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ---------ccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCcc
Confidence 22223333344444444444444444445566777777777777777766666677777777777777777
Q ss_pred ccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCC
Q 002121 277 KGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQ 337 (964)
Q Consensus 277 ~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 337 (964)
++.++. +..+++|++|+|++|++. ..+++|++|+++.|+++|.+|..++.++.
T Consensus 137 ~~~~~~~~~~l~~L~~L~l~~N~~~--------~~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 137 KSVPDGVFDRLTSLQYIWLHDNPWD--------CTCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp SCCCTTTTTTCTTCCEEECCSCCBC--------CCTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ceeCHHHhccCCCccEEEecCCCee--------cCCCCHHHHHHHHHhCCceeeccCccccC
Confidence 776665 667777777777777764 34567777777777777777777666554
No 353
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=1.2e-20 Score=231.28 Aligned_cols=271 Identities=17% Similarity=0.176 Sum_probs=114.0
Q ss_pred CHHHHHHHHHHHHHcC----CCCCCCCCCCCCCCCCccEEecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCC
Q 002121 25 DSRDAAALQSLKDAWQ----NTPPTWKNSDDPCGSWEGVTCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGG 100 (964)
Q Consensus 25 ~~~~~~aL~~~k~~~~----~~~~~W~~~~~~C~~w~gv~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~ 100 (964)
...++.+|+++..+.. .....|.....+++.|.++.++.++++.|+|.++++.. ++. ..|+.++|+.|
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~-- 201 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDE-ANQ-----ALLQHKKLSQY-- 201 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCc-chh-----hHhhcCccCcc--
Confidence 3456889999887652 22356765556666899999999999999999999886 232 33566777776
Q ss_pred CCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcc
Q 002121 101 LTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVS 180 (964)
Q Consensus 101 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~ 180 (964)
++..++++.|.+. ..|+.+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|
T Consensus 202 -------------~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp-- 263 (727)
T 4b8c_D 202 -------------SIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELP-- 263 (727)
T ss_dssp ----------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCC--
T ss_pred -------------cccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccC--
Confidence 2344556666666 66777777777888888888777 66666677777888888888777 666
Q ss_pred cCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccc
Q 002121 181 TITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNL 260 (964)
Q Consensus 181 ~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 260 (964)
..+..+++|++|+|++|+|+ .+|.. |..+.+|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+
T Consensus 264 ----~~~~~l~~L~~L~Ls~N~l~-~lp~~-~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 264 ----AEIKNLSNLRVLDLSHNRLT-SLPAE-LGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp ----GGGGGGTTCCEEECTTSCCS-SCCSS-GGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred ----hhhhCCCCCCEEeCcCCcCC-ccChh-hcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 34667777777777777777 66654 455667777777777776 667778888888888888888888888777
Q ss_pred cCCCC-CCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCC
Q 002121 261 NNLTN-VNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQ 339 (964)
Q Consensus 261 ~~l~~-L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 339 (964)
..+.. +..|+|++|.+++.+| ..|..|+++.|... ....+.|.+..+..+..+..+.
T Consensus 337 ~~~~~~~~~l~l~~N~l~~~~p-----~~l~~l~l~~n~~~-----------------~~~~~~l~~~~~~~~~~l~~~~ 394 (727)
T 4b8c_D 337 TEKSVTGLIFYLRDNRPEIPLP-----HERRFIEINTDGEP-----------------QREYDSLQQSTEHLATDLAKRT 394 (727)
T ss_dssp HHHHHHHHHHHHHHCCCCCCCC-----CC---------------------------------------------------
T ss_pred hhcchhhhHHhhccCcccCcCc-----cccceeEeeccccc-----------------ccccCCccccccchhhcccccc
Confidence 65432 2346788888887665 34566666666210 0011233344444555666667
Q ss_pred EEEcCCccccc
Q 002121 340 QVKLRNNAFNN 350 (964)
Q Consensus 340 ~L~L~~N~l~~ 350 (964)
...+++|-+.+
T Consensus 395 ~~~ls~Nil~~ 405 (727)
T 4b8c_D 395 FTVLSYNTLCQ 405 (727)
T ss_dssp -------CCCG
T ss_pred eeeeecccccc
Confidence 77777777654
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.80 E-value=2.6e-19 Score=211.79 Aligned_cols=187 Identities=27% Similarity=0.380 Sum_probs=136.5
Q ss_pred CccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcc
Q 002121 138 ELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMV 217 (964)
Q Consensus 138 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~ 217 (964)
+|+.|+|++|.|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. + .. +
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---------~~l~~L~~L~Ls~N~l~~-ip~-l-~~--~ 121 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---------ELPASLEYLDACDNRLST-LPE-L-PA--S 121 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---------CCCTTCCEEECCSSCCSC-CCC-C-CT--T
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---------cccCCCCEEEccCCCCCC-cch-h-hc--C
Confidence 67777777777764 555443 56777777777776 454 124667777777777764 665 2 22 7
Q ss_pred eeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCC
Q 002121 218 LIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNN 297 (964)
Q Consensus 218 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N 297 (964)
|++|++++|+|++ +|. .+++|+.|+|++|.|++ +|. .+++|++|+|++|+|++++. +. ++|++|+|++|
T Consensus 122 L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N 190 (571)
T 3cvr_A 122 LKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTN 190 (571)
T ss_dssp CCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSS
T ss_pred CCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCC
Confidence 7888888888886 555 57889999999999985 665 57889999999999998666 55 88999999999
Q ss_pred CCCCCCCCcccCCCCCC-------cEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccC
Q 002121 298 SFDPTEAPLWFSTLPSL-------TTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVG 359 (964)
Q Consensus 298 ~l~~~~~~~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 359 (964)
+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..+
T Consensus 191 ~L~--~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 191 LLE--SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CCS--SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred CCC--chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 995 4444 443 66 88888888888 467777778888888888888888777666554
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=2.2e-19 Score=195.98 Aligned_cols=177 Identities=21% Similarity=0.303 Sum_probs=129.0
Q ss_pred cccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCC
Q 002121 187 LDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNV 266 (964)
Q Consensus 187 l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 266 (964)
+..+++|+.|++++|.+. .++. +..+++|++|++++|++++..+ +..+++|++|+|++|.+++ ++ .+..+++|
T Consensus 42 ~~~l~~L~~L~l~~~~i~-~~~~--~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L 114 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKL 114 (291)
T ss_dssp HHHHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTC
T ss_pred hhhcCcccEEEccCCCcc-cChh--HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCC
Confidence 345566666666666665 3332 4455666667777777765444 7777888888888888874 33 37778888
Q ss_pred CeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCc
Q 002121 267 NELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNN 346 (964)
Q Consensus 267 ~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 346 (964)
++|+|++|++++. +.+..+++|++|++++|++++ . ..+..+++|+.|+|++|++++..+ +..+++|+.|+|++|
T Consensus 115 ~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~--~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N 188 (291)
T 1h6t_A 115 KSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITD--I-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 188 (291)
T ss_dssp CEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCC--C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCc--c-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCC
Confidence 8888888888775 557778888888888888863 2 467888888888888888887665 888888888888888
Q ss_pred ccccccCCCCccCCCCcEEeccCCcceeeccC
Q 002121 347 AFNNTLDMGNAVGPLLQLVDLQNNQISAITLG 378 (964)
Q Consensus 347 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~ 378 (964)
++++.. .+..+++|+.|+|++|+++..+..
T Consensus 189 ~i~~l~--~l~~l~~L~~L~l~~n~i~~~~~~ 218 (291)
T 1h6t_A 189 HISDLR--ALAGLKNLDVLELFSQECLNKPIN 218 (291)
T ss_dssp CCCBCG--GGTTCTTCSEEEEEEEEEECCCEE
T ss_pred cCCCCh--hhccCCCCCEEECcCCcccCCccc
Confidence 888753 377888888888888888876543
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=3.4e-19 Score=185.98 Aligned_cols=162 Identities=20% Similarity=0.224 Sum_probs=118.6
Q ss_pred EEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccC-ccccCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCC
Q 002121 220 HVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVP-TNLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNN 297 (964)
Q Consensus 220 ~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N 297 (964)
.+++++|.++. +|..+. ..++.|+|++|+|++..+ ..|.++++|++|+|++|+|+++++ .+.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 45555555553 454443 445777777777776544 456777778888888887777766 4777777888888888
Q ss_pred CCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeecc
Q 002121 298 SFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITL 377 (964)
Q Consensus 298 ~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~ 377 (964)
.++ ...+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+|
T Consensus 92 ~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l----- 165 (220)
T 2v70_A 92 RLE-NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF----- 165 (220)
T ss_dssp CCC-CCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE-----
T ss_pred ccC-ccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC-----
Confidence 876 55666788888888888888888888888888888888888888888888788888887777777666655
Q ss_pred CCCcccceeEeecCCcccccccccCccc
Q 002121 378 GSGIKNYTLILVGNPVCTATLANTNYCQ 405 (964)
Q Consensus 378 ~~~~~l~~l~l~~Np~c~~~l~~~~~~~ 405 (964)
.|+|.+.++..|.
T Consensus 166 ---------------~c~c~l~~l~~~~ 178 (220)
T 2v70_A 166 ---------------NCNCYLAWLGEWL 178 (220)
T ss_dssp ---------------ECSGGGHHHHHHH
T ss_pred ---------------cCCCchHHHHHHH
Confidence 4778877776664
No 357
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=5.6e-19 Score=189.14 Aligned_cols=136 Identities=19% Similarity=0.172 Sum_probs=108.0
Q ss_pred CCccceeecCCcEEEEEEEe-cCCcE--EEEEEecCCCcc------------------------hhHHHHHHHHHHHhcC
Q 002121 629 FSESNEIGSGGYGKVYRGML-SDGQV--VAIKRAQQGSMQ------------------------GGLEFKTEIELLSRVH 681 (964)
Q Consensus 629 ~~~~~~lG~G~fg~Vy~~~~-~~g~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 681 (964)
|...+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|+++|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999997 78999 999987543211 0125789999999999
Q ss_pred CCCc--cceeEEEEeeCceEEEEEeccC-C----ChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHh-hcCCCCeeccC
Q 002121 682 HKNL--VGLVGFCFEQGEQMLVYEFMAN-G----TLRESLSGRSGIHLDWKRRLRIALGSARGLAYLH-ELANPPIIHRD 753 (964)
Q Consensus 682 H~nI--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~D 753 (964)
|+++ ..++++ +..+|||||+.+ | +|.++... .++.++..++.|++.||+||| +.+ |+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE---LVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC---EECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC---EEeCC
Confidence 8865 333332 467899999952 4 66665432 345678899999999999999 887 99999
Q ss_pred CCCCcEEECCCCcEEEeecccceee
Q 002121 754 VKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 754 lk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
|||+|||+++ .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999764
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=2.9e-21 Score=229.72 Aligned_cols=121 Identities=24% Similarity=0.323 Sum_probs=63.1
Q ss_pred CcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCC
Q 002121 242 LEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEF 321 (964)
Q Consensus 242 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~ 321 (964)
|+.|+|++|.|++ +|. |.++++|+.|+|++|.|+.++..+..+++|++|+|++|.|++ +| .+..+++|+.|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~--lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN--VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC--CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC--Cc-ccCCCCCCcEEECCC
Confidence 4445555555542 333 444555555555555555443344555555555555555532 33 455555555566666
Q ss_pred Ccccccc-ChhccCCCCCCEEEcCCcccccccCCC---CccCCCCcEEec
Q 002121 322 GSLQGRV-PDKLFSYSQIQQVKLRNNAFNNTLDMG---NAVGPLLQLVDL 367 (964)
Q Consensus 322 N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~l~~L~~L~L 367 (964)
|+|++.. |..|..+++|+.|+|++|++++.++.. +..+++|+.|+|
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 6555554 566666666666666666666554422 223566666653
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=5.5e-19 Score=211.34 Aligned_cols=195 Identities=21% Similarity=0.292 Sum_probs=97.3
Q ss_pred cccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCcccccc
Q 002121 112 LQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLK 191 (964)
Q Consensus 112 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~ 191 (964)
+..+..+.|..+.+...++ +..|++|+.|+|++|.+.. ++ .|..+++|+.|+|++|++++..| +..++
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--------l~~l~ 87 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--------LTNLK 87 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--------GGGCT
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--------hccCC
Confidence 4445555666655553332 3455666666666666653 22 35556666666666666652211 44555
Q ss_pred CCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeec
Q 002121 192 NAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNL 271 (964)
Q Consensus 192 ~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 271 (964)
+|+.|+|++|.+++ ++ .+..+++|+.|+|++|.|++ + ..+..+++|+.|+|
T Consensus 88 ~L~~L~Ls~N~l~~-l~--------------------------~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 88 NLGWLFLDENKIKD-LS--------------------------SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TCCEEECCSSCCCC-CT--------------------------TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCEEECcCCCCCC-Ch--------------------------hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 55555555555441 11 23444445555555555442 1 23444455555555
Q ss_pred cCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccc
Q 002121 272 AHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNT 351 (964)
Q Consensus 272 s~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 351 (964)
++|.|+++ +.+..+++|+.|+|++|.|+ ...| +..+++|+.|+|++|+|.+. ..+..+++|+.|+|++|++.+.
T Consensus 139 s~N~l~~l-~~l~~l~~L~~L~Ls~N~l~-~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 139 GNNKITDI-TVLSRLTKLDTLSLEDNQIS-DIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CSSCCCCC-GGGGSCTTCSEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred CCCccCCc-hhhcccCCCCEEECcCCcCC-Cchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 55555443 33444555555555555553 2222 45555555555555555543 2355555555555555555544
Q ss_pred cC
Q 002121 352 LD 353 (964)
Q Consensus 352 ~~ 353 (964)
..
T Consensus 213 p~ 214 (605)
T 1m9s_A 213 PI 214 (605)
T ss_dssp CC
T ss_pred cc
Confidence 33
No 360
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.78 E-value=3.8e-22 Score=240.71 Aligned_cols=328 Identities=11% Similarity=0.035 Sum_probs=198.0
Q ss_pred CCCeeEEEcCCCCccccccCCcC-CCCcccEEecccCCCCCCC-CCCCCCCcccchhhccccccccCcCCcccC----CC
Q 002121 63 NSRVTALGLSTMGLTGKLSGDIG-GLTELRSLDLSYNGGLTGS-LSPRIGDLQKLNILILAGCGFTGNIPDEIG----NL 136 (964)
Q Consensus 63 ~~~v~~L~L~~~~l~g~~~~~l~-~l~~L~~L~L~~N~~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~----~l 136 (964)
..+++.|+|+++.+++..+..+. .+++|++|+|++|..+... ++..+.++++|++|+|++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 35788899999888877666665 6888999999887433332 333445788899999998888765444443 56
Q ss_pred CCccEEEcccCc--ccCc-CCCcCCCcccccccccccc-ccccccCccc-------------------------------
Q 002121 137 AELSFLALNSNN--FSGR-IPPSLGKLSQLYWLDLADN-QLTGSIPVST------------------------------- 181 (964)
Q Consensus 137 ~~L~~L~Ls~N~--l~~~-~p~~~~~l~~L~~L~Ls~N-~l~g~iP~~~------------------------------- 181 (964)
++|++|+|++|. ++.. ++..+.++++|++|+|++| .+.+ +|...
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~ 262 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHh
Confidence 688888888886 2210 1111234578888888877 2221 22100
Q ss_pred -------------CCC----CccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCccc-CCcccCCCCCCc
Q 002121 182 -------------ITS----PGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGN-IPESLGYVQTLE 243 (964)
Q Consensus 182 -------------~~~----~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~-~p~~~~~l~~L~ 243 (964)
... ..+..+++|++|++++|.+++.....++..+++|++|++++| ++.. ++.....+++|+
T Consensus 263 ~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~ 341 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLR 341 (594)
T ss_dssp TCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCC
T ss_pred cCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCC
Confidence 000 001134566666666666554333344455566666666665 3321 122222356666
Q ss_pred EEEcc---------cCcCccccCcccc-CCCCCCeeeccCccCccCCCC-C-CCCCCCCEEEcc--C----CCCCCC---
Q 002121 244 VLRLD---------RNALTGKVPTNLN-NLTNVNELNLAHNDLKGPFPD-L-SQMNSLSYVDLS--N----NSFDPT--- 302 (964)
Q Consensus 244 ~L~Ls---------~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~-l-~~l~~L~~L~Ls--~----N~l~~~--- 302 (964)
.|+|+ .|.+++.....+. ++++|+.|.++.|.+++.... + ..+++|+.|+|+ + |.++..
T Consensus 342 ~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~ 421 (594)
T 2p1m_B 342 ELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLD 421 (594)
T ss_dssp EEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTH
T ss_pred EEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchh
Confidence 66662 3444433222222 366777777766766653322 2 246788888888 3 455311
Q ss_pred -CCCcccCCCCCCcEEECCCCccccccChhccC-CCCCCEEEcCCcccccccCCCC-ccCCCCcEEeccCCcceeeccC-
Q 002121 303 -EAPLWFSTLPSLTTLICEFGSLQGRVPDKLFS-YSQIQQVKLRNNAFNNTLDMGN-AVGPLLQLVDLQNNQISAITLG- 378 (964)
Q Consensus 303 -~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~i~~~- 378 (964)
..+..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++.....+ ..+++|+.|+|++|+++.....
T Consensus 422 ~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~ 500 (594)
T 2p1m_B 422 IGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLA 500 (594)
T ss_dssp HHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHH
T ss_pred hHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHH
Confidence 1112256678888888876 666666666655 7888888888888876555444 5678888888888888654322
Q ss_pred ---CCcccceeEeecCCc
Q 002121 379 ---SGIKNYTLILVGNPV 393 (964)
Q Consensus 379 ---~~~~l~~l~l~~Np~ 393 (964)
....++.|++.+|+.
T Consensus 501 ~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 501 NASKLETMRSLWMSSCSV 518 (594)
T ss_dssp TGGGGGGSSEEEEESSCC
T ss_pred HHHhCCCCCEEeeeCCCC
Confidence 344577888888875
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=7.3e-19 Score=210.30 Aligned_cols=199 Identities=20% Similarity=0.282 Sum_probs=156.6
Q ss_pred cccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCC
Q 002121 161 SQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQ 240 (964)
Q Consensus 161 ~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~ 240 (964)
.++..+.+..+.+...++ +..|++|+.|++++|.+. .++. +..+++|+.|+|++|+|++..+ +..++
T Consensus 21 ~~l~~l~l~~~~i~~~~~--------~~~L~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~Ls~N~l~~~~~--l~~l~ 87 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--------QNELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LTNLK 87 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--------HHHHTTCCCCBCTTCCCC-CCTT--GGGCTTCCEEECTTSCCCCCGG--GGGCT
T ss_pred HHHHHHhccCCCcccccc--------hhcCCCCCEEECcCCCCC-CChH--HccCCCCCEEEeeCCCCCCChh--hccCC
Confidence 344455555555542222 345556666666666655 3432 4556667777777777776554 88999
Q ss_pred CCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECC
Q 002121 241 TLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICE 320 (964)
Q Consensus 241 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls 320 (964)
+|+.|+|++|.|++ +| .|..+++|+.|+|++|.|+++ +.+..+++|+.|+|++|.+++. ..+..+++|+.|+|+
T Consensus 88 ~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l---~~l~~l~~L~~L~Ls 161 (605)
T 1m9s_A 88 NLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI---TVLSRLTKLDTLSLE 161 (605)
T ss_dssp TCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC-GGGGGCTTCSEEECCSSCCCCC---GGGGSCTTCSEEECC
T ss_pred CCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC-ccccCCCccCEEECCCCccCCc---hhhcccCCCCEEECc
Confidence 99999999999995 44 799999999999999999985 5689999999999999999732 568999999999999
Q ss_pred CCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCCCcc
Q 002121 321 FGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIK 382 (964)
Q Consensus 321 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 382 (964)
+|+|.+..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+++..+......
T Consensus 162 ~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 162 DNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSN 219 (605)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSS
T ss_pred CCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccccccc
Confidence 999998877 99999999999999999986 36889999999999999999877654433
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=6.6e-19 Score=198.51 Aligned_cols=175 Identities=18% Similarity=0.124 Sum_probs=120.5
Q ss_pred eeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccC-CCCCCcEEEcccCcCccccCccccCCCCCCeeeccC
Q 002121 195 HFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLG-YVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAH 273 (964)
Q Consensus 195 ~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 273 (964)
.+++++|.++ .+|..++ ..++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 22 ~l~c~~~~l~-~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EEECCSSCCS-SCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EEEeCCCCcC-ccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 4455555554 4444332 2356666666666666666665 677777777777777766666777777777777777
Q ss_pred ccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhc---cCCCCCCEEEcCCcccc
Q 002121 274 NDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKL---FSYSQIQQVKLRNNAFN 349 (964)
Q Consensus 274 N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~ 349 (964)
|+|+++++. +..+++|++|+|++|+|+ ...+..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCccc-EECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 777776664 677777777777777776 5556667777777777777777776555555 56788888888888888
Q ss_pred cccCCCCccCCC--CcEEeccCCccee
Q 002121 350 NTLDMGNAVGPL--LQLVDLQNNQISA 374 (964)
Q Consensus 350 ~~~~~~~~~l~~--L~~L~L~~N~l~~ 374 (964)
...+..+..++. |+.|+|++|+|.+
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred ccCHHHhhhccHhhcceEEecCCCccC
Confidence 776666777766 4788888888875
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=4.3e-19 Score=193.62 Aligned_cols=193 Identities=21% Similarity=0.281 Sum_probs=105.0
Q ss_pred cccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCcccccc
Q 002121 112 LQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLK 191 (964)
Q Consensus 112 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~ 191 (964)
+.++..+.+..+.+++..+ +..+++|+.|++++|.++.. + .+..+++|++|+|++|++++ ++ .+..++
T Consensus 23 l~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~-~~-------~l~~l~ 90 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTD-IK-------PLANLK 90 (291)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CG-------GGTTCT
T ss_pred HHHHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCC-Cc-------ccccCC
Confidence 3445555666666653322 34566677777777776633 2 36666667777777666662 22 144555
Q ss_pred CCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeec
Q 002121 192 NAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNL 271 (964)
Q Consensus 192 ~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 271 (964)
+|+.|++++|++++ ++ .+..+++|+.|+|++|++++. ..+..+++|+.|+|
T Consensus 91 ~L~~L~l~~n~l~~-~~--------------------------~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 91 NLGWLFLDENKVKD-LS--------------------------SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYL 141 (291)
T ss_dssp TCCEEECCSSCCCC-GG--------------------------GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEEC
T ss_pred CCCEEECCCCcCCC-Ch--------------------------hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEc
Confidence 55665555555541 21 134444555555555555432 23444555555555
Q ss_pred cCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccc
Q 002121 272 AHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNT 351 (964)
Q Consensus 272 s~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 351 (964)
++|++++. +.+..+++|++|+|++|.++ ...+ +..+++|+.|+|++|++++. + .+..+++|+.|+|++|+++..
T Consensus 142 ~~n~l~~~-~~l~~l~~L~~L~L~~N~l~-~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 142 GNNKITDI-TVLSRLTKLDTLSLEDNQIS-DIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CSSCCCCC-GGGGGCTTCSEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred cCCcCCcc-hhhccCCCCCEEEccCCccc-cchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCC
Confidence 55555544 34555555555555555554 2222 55566666666666666543 2 366667777777777766553
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=1.8e-18 Score=181.74 Aligned_cols=163 Identities=22% Similarity=0.253 Sum_probs=120.5
Q ss_pred CCCCCCCCCCCCccEEecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhcccccc
Q 002121 45 TWKNSDDPCGSWEGVTCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCG 124 (964)
Q Consensus 45 ~W~~~~~~C~~w~gv~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~ 124 (964)
-|......| +|++|.|+..+++ .+|..+. ++|++|+|++| .+.+..|..|..+++|++|+|++|+
T Consensus 11 ~~~~~~~~C-s~~~v~c~~~~l~-----------~ip~~~~--~~L~~L~Ls~n-~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 11 AACPSQCSC-SGTTVDCRSKRHA-----------SVPAGIP--TNAQILYLHDN-QITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCCTTCEE-ETTEEECTTSCCS-----------SCCSCCC--TTCSEEECCSS-CCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCCCCCEE-eCCEeEccCCCcC-----------ccCCCCC--CCCCEEEcCCC-ccCccCHHHhhCccCCcEEECCCCC
Confidence 444455666 8999999755433 4444433 78999999999 7888888889999999999999999
Q ss_pred ccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCccc
Q 002121 125 FTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLS 204 (964)
Q Consensus 125 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~ 204 (964)
|+...+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+| ..+..+++|+.|+|++|+|+
T Consensus 76 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp------~~~~~l~~L~~L~L~~N~l~ 148 (229)
T 3e6j_A 76 LGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELP------RGIERLTHLTHLALDQNQLK 148 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCC------TTGGGCTTCSEEECCSSCCC
T ss_pred CCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccC------cccccCCCCCEEECCCCcCC
Confidence 98555567788999999999999998777777888889999999999888 666 34566666666666666665
Q ss_pred ccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCcc
Q 002121 205 GTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTG 254 (964)
Q Consensus 205 g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (964)
. ..+..|..+++|+.|+|++|.+.+
T Consensus 149 -~------------------------~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 149 -S------------------------IPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp -C------------------------CCTTTTTTCTTCCEEECTTSCBCT
T ss_pred -c------------------------cCHHHHhCCCCCCEEEeeCCCccC
Confidence 3 333445556666666666666653
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=9.3e-21 Score=225.37 Aligned_cols=205 Identities=17% Similarity=0.090 Sum_probs=156.6
Q ss_pred CCcccchhhccccccccCcCCcccCCCCCccEEEcccCc-------------ccCcCCCcCCCcccccccc-cccccccc
Q 002121 110 GDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNN-------------FSGRIPPSLGKLSQLYWLD-LADNQLTG 175 (964)
Q Consensus 110 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~g 175 (964)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45667777777777776 677777777777777776664 4555666667777777776 5655543
Q ss_pred ccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccc
Q 002121 176 SIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGK 255 (964)
Q Consensus 176 ~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 255 (964)
.|+.+.+++|.++ .++. ..|+.|+|++|+|++ +|. ++.+++|+.|+|++|.|+ .
T Consensus 424 ----------------~L~~l~l~~n~i~-~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~ 477 (567)
T 1dce_A 424 ----------------DLRSKFLLENSVL-KMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-A 477 (567)
T ss_dssp ----------------HHHHHHHHHHHHH-HHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-C
T ss_pred ----------------hhhhhhhhccccc-ccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-c
Confidence 3344556666665 3332 247889999999986 565 888999999999999999 7
Q ss_pred cCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccCh---hc
Q 002121 256 VPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPD---KL 332 (964)
Q Consensus 256 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~---~~ 332 (964)
+|..|+++++|+.|+|++|+|++++ .+..+++|++|+|++|+|++...|..+..+++|+.|+|++|++++.+|. .+
T Consensus 478 lp~~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~ 556 (567)
T 1dce_A 478 LPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLA 556 (567)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHH
T ss_pred cchhhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHH
Confidence 8889999999999999999999854 8889999999999999997333388899999999999999999887653 23
Q ss_pred cCCCCCCEEEc
Q 002121 333 FSYSQIQQVKL 343 (964)
Q Consensus 333 ~~l~~L~~L~L 343 (964)
..+++|+.|+|
T Consensus 557 ~~lp~L~~L~l 567 (567)
T 1dce_A 557 EMLPSVSSILT 567 (567)
T ss_dssp HHCTTCSEEEC
T ss_pred HHCcccCccCC
Confidence 45888998875
No 366
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=5.8e-18 Score=176.62 Aligned_cols=152 Identities=19% Similarity=0.199 Sum_probs=128.7
Q ss_pred CeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccC
Q 002121 194 KHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAH 273 (964)
Q Consensus 194 ~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 273 (964)
+.+++++|.++ .+|..+. .+|+.|++++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 45566666665 5665443 5678888888888877777888899999999999999988888999999999999999
Q ss_pred ccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCccccc
Q 002121 274 NDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNN 350 (964)
Q Consensus 274 N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 350 (964)
|+|+.+++. +.++++|++|+|++|+|+ ...+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCC-EeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 999988776 688999999999999997 6677889999999999999999998888889999999999999999864
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=1.4e-17 Score=174.85 Aligned_cols=149 Identities=19% Similarity=0.250 Sum_probs=98.9
Q ss_pred EEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCC
Q 002121 220 HVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNS 298 (964)
Q Consensus 220 ~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~ 298 (964)
.+++++++++ .+|..+. ++|+.|+|++|.|++..|..|.++++|++|+|++|+|+.+++. +..+++|++|+|++|+
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 3444555544 3443332 6667777777777766666677777777777777777666554 5666777777777777
Q ss_pred CCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcce
Q 002121 299 FDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQIS 373 (964)
Q Consensus 299 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 373 (964)
|+ ...+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|+
T Consensus 100 l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 100 LT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CC-CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CC-ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 75 445555667777777777777777 56667777777777777777777776666777777777766666654
No 368
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=1.1e-17 Score=174.60 Aligned_cols=152 Identities=18% Similarity=0.200 Sum_probs=104.3
Q ss_pred eeEccCCcccccccccccCCCcceeEEEccCCcCcccCC-cccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccC
Q 002121 195 HFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIP-ESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAH 273 (964)
Q Consensus 195 ~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 273 (964)
.+++++|.++ .+|..++ ..+++|+|++|+|++..+ ..|..+++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 15 ~l~~s~n~l~-~iP~~~~---~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP---QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCccCCC---CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 4444444444 3444332 234556666666665543 3466677777777777777766666777777777777777
Q ss_pred ccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccc
Q 002121 274 NDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNT 351 (964)
Q Consensus 274 N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 351 (964)
|+|++.++. +..+++|++|+|++|+|+ ...|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++...
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCC-CBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCC-eECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 777766664 667777777777777776 55566777888888888888888888888888888888888888888754
No 369
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.73 E-value=3.8e-20 Score=223.16 Aligned_cols=302 Identities=15% Similarity=0.113 Sum_probs=199.5
Q ss_pred CCeeEEEcCCC-Ccccc-ccCCcCCCCcccEEecccCCCCCCCCCCCC----CCcccchhhcccccc--ccCc-CCcccC
Q 002121 64 SRVTALGLSTM-GLTGK-LSGDIGGLTELRSLDLSYNGGLTGSLSPRI----GDLQKLNILILAGCG--FTGN-IPDEIG 134 (964)
Q Consensus 64 ~~v~~L~L~~~-~l~g~-~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l----~~l~~L~~L~L~~n~--l~~~-~p~~~~ 134 (964)
.+++.|+|.+| .++.. ++..+..+++|++|+|++| .+.+..+..+ ..+++|++|+|++|. ++.. ++..+.
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~-~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~ 208 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRES-DVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVT 208 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTC-EEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCC-ccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHH
Confidence 46777777776 44432 3333346677777777776 4444333222 244566666666665 2111 111123
Q ss_pred CCCCccEEEcccCc--------------------------------------------------ccC----cCCCcCCCc
Q 002121 135 NLAELSFLALNSNN--------------------------------------------------FSG----RIPPSLGKL 160 (964)
Q Consensus 135 ~l~~L~~L~Ls~N~--------------------------------------------------l~~----~~p~~~~~l 160 (964)
++++|++|+|++|. +.. .++..+..+
T Consensus 209 ~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~ 288 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVC 288 (594)
T ss_dssp HCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHH
T ss_pred hCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhh
Confidence 34566666666551 111 112222356
Q ss_pred cccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEc---------cCCcCccc
Q 002121 161 SQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLF---------DGNQLSGN 231 (964)
Q Consensus 161 ~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l---------~~N~l~~~ 231 (964)
++|++|+|++|.+++.... ..+..+++|+.|++++| ++......+...+++|++|++ ..|.+++.
T Consensus 289 ~~L~~L~L~~~~l~~~~l~-----~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~ 362 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLV-----KLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQ 362 (594)
T ss_dssp TTCCEEECTTCCCCHHHHH-----HHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHH
T ss_pred CCCCEEEccCCCCCHHHHH-----HHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHH
Confidence 8899999999987743221 12457899999999998 543333334445788999998 34566654
Q ss_pred CCcccC-CCCCCcEEEcccCcCccccCcccc-CCCCCCeeecc--C----ccCccCCCC------CCCCCCCCEEEccCC
Q 002121 232 IPESLG-YVQTLEVLRLDRNALTGKVPTNLN-NLTNVNELNLA--H----NDLKGPFPD------LSQMNSLSYVDLSNN 297 (964)
Q Consensus 232 ~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~~~~------l~~l~~L~~L~Ls~N 297 (964)
....+. .+++|+.|.++.|.+++.....+. .+++|+.|+|+ + |.++..+.+ +..+++|++|+|++
T Consensus 363 ~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~- 441 (594)
T 2p1m_B 363 GLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG- 441 (594)
T ss_dssp HHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-
T ss_pred HHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-
Confidence 333333 489999999999999977666665 58999999999 4 666644321 56788999999987
Q ss_pred CCCCCCCCcccC-CCCCCcEEECCCCccccccChhc-cCCCCCCEEEcCCcccccccCC-CCccCCCCcEEeccCCccee
Q 002121 298 SFDPTEAPLWFS-TLPSLTTLICEFGSLQGRVPDKL-FSYSQIQQVKLRNNAFNNTLDM-GNAVGPLLQLVDLQNNQISA 374 (964)
Q Consensus 298 ~l~~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~ 374 (964)
.++ ......+. .+++|+.|+|++|.+++..+..+ .++++|+.|+|++|++++.... ....+++|+.|+|++|+++.
T Consensus 442 ~l~-~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 442 LLT-DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp SCC-HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred ccc-HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 665 22233343 38999999999999987766666 6799999999999999765543 34568999999999999854
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=1.6e-17 Score=178.28 Aligned_cols=174 Identities=21% Similarity=0.282 Sum_probs=117.3
Q ss_pred CccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCC
Q 002121 159 KLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGY 238 (964)
Q Consensus 159 ~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~ 238 (964)
++.++..+++++|.++ .++ .+..+++|+.|++++|+++ . ++ .+..
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-------~~~~l~~L~~L~l~~n~i~-~-------------------------l~-~l~~ 61 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-------SQKELSGVQNFNGDNSNIQ-S-------------------------LA-GMQF 61 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-------CHHHHTTCSEEECTTSCCC-C-------------------------CT-TGGG
T ss_pred HHHHHHHHHhcCCCcc-ccc-------chhhcCcCcEEECcCCCcc-c-------------------------ch-HHhh
Confidence 4556666777777666 222 2455666666666666554 2 22 3556
Q ss_pred CCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEE
Q 002121 239 VQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLI 318 (964)
Q Consensus 239 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 318 (964)
+++|+.|+|++|+|++..+ +.++++|++|+|++|++++.++ +.. ++|++|+|++|.+++ .+ .+..+++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~-~~~-~~L~~L~L~~N~l~~--~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNG-IPS-ACLSRLFLDNNELRD--TD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTT-CCC-SSCCEEECCSSCCSB--SG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCc-ccc-CcccEEEccCCccCC--Ch-hhcCcccccEEE
Confidence 6667777777777764433 6677777777777777766443 223 777777777777752 22 477778888888
Q ss_pred CCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccC
Q 002121 319 CEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLG 378 (964)
Q Consensus 319 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~ 378 (964)
|++|+|++. + .+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+++..+..
T Consensus 135 Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~~~ 190 (263)
T 1xeu_A 135 IRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEPVK 190 (263)
T ss_dssp CTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCCEE
T ss_pred CCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCccc
Confidence 888887765 2 577788888888888888776 6677888888888888888876543
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=1.1e-17 Score=179.72 Aligned_cols=168 Identities=20% Similarity=0.330 Sum_probs=95.6
Q ss_pred CcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccc
Q 002121 111 DLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQL 190 (964)
Q Consensus 111 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l 190 (964)
.+.++..+++++|.++ .++ .+..+++|++|++++|.++ .++ .+..+++|++|+|++|++++ +| .+..+
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~-------~l~~l 84 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LS-------PLKDL 84 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CG-------GGTTC
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Ch-------hhccC
Confidence 5667777788888877 334 5777788888888888887 444 67777888888888888773 33 15666
Q ss_pred cCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeee
Q 002121 191 KNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELN 270 (964)
Q Consensus 191 ~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 270 (964)
++|+.|+|++|+++ .++...+ .+|++|++++|+|++. ..+..+++|+.|+|++|+|++. + .+..+++|+.|+
T Consensus 85 ~~L~~L~L~~N~l~-~l~~~~~---~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~ 156 (263)
T 1xeu_A 85 TKLEELSVNRNRLK-NLNGIPS---ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLD 156 (263)
T ss_dssp SSCCEEECCSSCCS-CCTTCCC---SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEE
T ss_pred CCCCEEECCCCccC-CcCcccc---CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEE
Confidence 77777777777766 2332111 4444455555544432 1344455555555555555432 2 344444444444
Q ss_pred ccCccCccCCCCCCCCCCCCEEEccCCCC
Q 002121 271 LAHNDLKGPFPDLSQMNSLSYVDLSNNSF 299 (964)
Q Consensus 271 Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l 299 (964)
|++|++++. +.+..+++|+.|++++|++
T Consensus 157 L~~N~i~~~-~~l~~l~~L~~L~l~~N~~ 184 (263)
T 1xeu_A 157 LHGNEITNT-GGLTRLKKVNWIDLTGQKC 184 (263)
T ss_dssp CTTSCCCBC-TTSTTCCCCCEEEEEEEEE
T ss_pred CCCCcCcch-HHhccCCCCCEEeCCCCcc
Confidence 444444443 3333344444444444433
No 372
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=8.4e-18 Score=186.93 Aligned_cols=280 Identities=13% Similarity=0.110 Sum_probs=133.7
Q ss_pred ccccCCcCC--CCcccEEecccCCCCCCCCCCCCCC-cccchhhcccccccc--CcCCcccCCCCCccEEEcccCcccCc
Q 002121 78 GKLSGDIGG--LTELRSLDLSYNGGLTGSLSPRIGD-LQKLNILILAGCGFT--GNIPDEIGNLAELSFLALNSNNFSGR 152 (964)
Q Consensus 78 g~~~~~l~~--l~~L~~L~L~~N~~l~~~~p~~l~~-l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~ 152 (964)
|.++..+.. +.+|+.|.++++ +...-...+.. +++|+.|+|++|+|. ...+. .++.++.+.+..|.|.
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~--i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~-- 85 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK--LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP-- 85 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE--ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC--
T ss_pred CcHHhhccchhhCceeEEEEecc--ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC--
Confidence 344444443 667788888765 22111112222 566777777777776 22222 2223455555555433
Q ss_pred CCCcCCC--------ccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEcc
Q 002121 153 IPPSLGK--------LSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFD 224 (964)
Q Consensus 153 ~p~~~~~--------l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~ 224 (964)
+.+|.+ +++|+.|+|.+ .++ .|+ ...|.++++|+.|++++|.+. .++..+|....++..+.+.
T Consensus 86 -~~aF~~~~~~~~~g~~~L~~l~L~~-~i~-~I~-----~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~ 156 (329)
T 3sb4_A 86 -AYAFSNVVNGVTKGKQTLEKVILSE-KIK-NIE-----DAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLG 156 (329)
T ss_dssp -TTTTEEEETTEEEECTTCCC-CBCT-TCC-EEC-----TTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTT
T ss_pred -HHHhcccccccccccCCCcEEECCc-ccc-chh-----HHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCc
Confidence 355666 77777777777 665 333 346777777777777777776 6777777777667666655
Q ss_pred CCc----CcccCCcccCCCCCCc-EEEcccCcCccccCccc----cCCCCCCeeeccCccCccCCCCC-CCCCCCCEEEc
Q 002121 225 GNQ----LSGNIPESLGYVQTLE-VLRLDRNALTGKVPTNL----NNLTNVNELNLAHNDLKGPFPDL-SQMNSLSYVDL 294 (964)
Q Consensus 225 ~N~----l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~----~~l~~L~~L~Ls~N~l~~~~~~l-~~l~~L~~L~L 294 (964)
.+. ........|.++..|+ .+.+.... .++..+ ....++..+.+.++-.......+ ..+++|+.|+|
T Consensus 157 ~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L 233 (329)
T 3sb4_A 157 SSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDI 233 (329)
T ss_dssp CTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEEC
T ss_pred chhhhhccccccccccccccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEEC
Confidence 522 1222233344444444 33332211 111100 01222233333222110000000 11344444444
Q ss_pred cCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCC-EEEcCCcccccccCCCCccCCCCcEEeccCCcce
Q 002121 295 SNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQ-QVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQIS 373 (964)
Q Consensus 295 s~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 373 (964)
++|.++ .+....|.++++|+.|+|.+| ++.+.+.+|.++++|+ .|+|.+ .++.+.+.+|.++++|+.|+|++|+++
T Consensus 234 ~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~ 310 (329)
T 3sb4_A 234 SKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKIT 310 (329)
T ss_dssp TTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCC
T ss_pred CCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccC
Confidence 444443 333444444444444444444 4444444444444454 444444 444444444555555555555445554
Q ss_pred eeccCC
Q 002121 374 AITLGS 379 (964)
Q Consensus 374 ~i~~~~ 379 (964)
.|+...
T Consensus 311 ~I~~~a 316 (329)
T 3sb4_A 311 TLGDEL 316 (329)
T ss_dssp EECTTT
T ss_pred ccchhh
Confidence 444433
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=8e-17 Score=164.17 Aligned_cols=160 Identities=17% Similarity=0.226 Sum_probs=98.8
Q ss_pred cEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC--CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECC
Q 002121 243 EVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD--LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICE 320 (964)
Q Consensus 243 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~--l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls 320 (964)
+.|++++|.|+ .+|..+.. +|++|+|++|+|++.++. +..+++|++|+|++|.|+ ...|..|.++++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCC-CcCHhHcCCcccCCEEECC
Confidence 45555555554 44443332 556666666666655543 555666666666666665 4455566677777777777
Q ss_pred CCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCCCcccceeEeecCCcccccccc
Q 002121 321 FGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIKNYTLILVGNPVCTATLAN 400 (964)
Q Consensus 321 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~l~l~~Np~c~~~l~~ 400 (964)
+|+|++..+..|.++++|++|+|++|++++..+..+..+++|+.|+|++|+|+ |+|.+..
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--------------------c~c~l~~ 146 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN--------------------CNCHLAW 146 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC--------------------CSGGGHH
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc--------------------CcCcchH
Confidence 77777777777777777777777777777777777777777777776666654 6666665
Q ss_pred cCccccCCCCCcccccccccCCCCCCCCCC
Q 002121 401 TNYCQLQQPTTKAYSTSLANCGGKSCPPEQ 430 (964)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 430 (964)
+..|.... ........|+.|.-..+.
T Consensus 147 ~~~~l~~~----~~~~~~~~C~~P~~l~~~ 172 (192)
T 1w8a_A 147 FAEWLRKK----SLNGGAARCGAPSKVRDV 172 (192)
T ss_dssp HHHHHHHH----CCSGGGCBBCSSTTTTTS
T ss_pred HHHHHHHc----CCCCCCCCCCCChHHcCC
Confidence 55552221 112345567777655544
No 374
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=7.6e-17 Score=164.40 Aligned_cols=139 Identities=22% Similarity=0.280 Sum_probs=69.8
Q ss_pred CCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCC
Q 002121 266 VNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRN 345 (964)
Q Consensus 266 L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 345 (964)
|++|+|++|.|+.++..+..+++|++|+|++|.|+ ...+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 33 l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 111 (193)
T 2wfh_A 33 VTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHG 111 (193)
T ss_dssp CCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCchhHHHhhcccCCCEEECCCCcCC-EeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCC
Confidence 33444444433333323333334444444444443 33333445555555555555555555555555555555555555
Q ss_pred cccccccCCCCccCCCCcEEeccCCcceeeccCCCcccceeEeecCC-cccccccccCccccCCCCCcccccccccCCCC
Q 002121 346 NAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIKNYTLILVGNP-VCTATLANTNYCQLQQPTTKAYSTSLANCGGK 424 (964)
Q Consensus 346 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~l~l~~Np-~c~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~ 424 (964)
|+|+...+..|..+++|+.|+ |.+|| .|+|.+.++..|...... ......|.+|
T Consensus 112 N~l~~~~~~~~~~l~~L~~L~---------------------L~~N~~~C~c~l~~l~~~~~~~~~----~~~~~~C~~P 166 (193)
T 2wfh_A 112 NDISVVPEGAFNDLSALSHLA---------------------IGANPLYCDCNMQWLSDWVKSEYK----EPGIARCAGP 166 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEE---------------------CCSSCEECSGGGHHHHHHHHHSSC----CCSCCBEEES
T ss_pred CCCCeeChhhhhcCccccEEE---------------------eCCCCeecCCcCHHHHHHHHhccC----CCCCcCcCCc
Confidence 555555555555555555544 44555 599999988888433211 1223456555
Q ss_pred CCCCCC
Q 002121 425 SCPPEQ 430 (964)
Q Consensus 425 ~~~~~~ 430 (964)
+-..++
T Consensus 167 ~~l~g~ 172 (193)
T 2wfh_A 167 GEMADK 172 (193)
T ss_dssp GGGTTC
T ss_pred hHHCCC
Confidence 444443
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.68 E-value=5.3e-17 Score=166.28 Aligned_cols=153 Identities=15% Similarity=0.252 Sum_probs=80.3
Q ss_pred cCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCccccccccccc
Q 002121 133 IGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLF 212 (964)
Q Consensus 133 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f 212 (964)
...+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+ +.+..+++|++|++++|++
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~-------~~l~~l~~L~~L~l~~n~l--------- 100 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NY-------NPISGLSNLERLRIMGKDV--------- 100 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CC-------GGGTTCTTCCEEEEECTTC---------
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cc-------hhhhcCCCCCEEEeECCcc---------
Confidence 356677777777777777 444 5666777777777777554 11 1233344444444444433
Q ss_pred CCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCcc-CccCCCCCCCCCCCCE
Q 002121 213 SPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHND-LKGPFPDLSQMNSLSY 291 (964)
Q Consensus 213 ~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~l~~l~~L~~ 291 (964)
++..+..++.+++|++|+|++|++++..|..|..+++|++|+|++|. ++.. +.+..+++|++
T Consensus 101 ----------------~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~~l~~l~~L~~ 163 (197)
T 4ezg_A 101 ----------------TSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKS 163 (197)
T ss_dssp ----------------BGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-GGGGGCSSCCE
T ss_pred ----------------CcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-HhhcCCCCCCE
Confidence 33344445556666666666666665555556666666666666665 3332 23444555555
Q ss_pred EEccCCCCCCCCCCcccCCCCCCcEEECCCCcc
Q 002121 292 VDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSL 324 (964)
Q Consensus 292 L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 324 (964)
|++++|+++. .+ .+..+++|+.|++++|++
T Consensus 164 L~l~~n~i~~--~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 164 LNIQFDGVHD--YR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp EECTTBCCCC--CT-TGGGCSSCCEEEECBC--
T ss_pred EECCCCCCcC--hH-HhccCCCCCEEEeeCccc
Confidence 5555555431 11 233444444444444443
No 376
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.68 E-value=1.2e-16 Score=163.74 Aligned_cols=131 Identities=18% Similarity=0.326 Sum_probs=71.3
Q ss_pred cCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCcc-CCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCC
Q 002121 236 LGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKG-PFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSL 314 (964)
Q Consensus 236 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L 314 (964)
+..+++|++|++++|.++ .+..+..+++|++|+|++|.+++ .+..+..+++|++|++++|.++ ...+..+..+++|
T Consensus 62 l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~-~~~~~~l~~l~~L 138 (197)
T 4ezg_A 62 IEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHD-DSILTKINTLPKV 138 (197)
T ss_dssp GGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCB-GGGHHHHTTCSSC
T ss_pred HhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccC-cHhHHHHhhCCCC
Confidence 444555555555555444 12245555555555555555554 2333555555555555555554 3334455566666
Q ss_pred cEEECCCCc-cccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcce
Q 002121 315 TTLICEFGS-LQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQIS 373 (964)
Q Consensus 315 ~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 373 (964)
++|+|++|+ ++ .+| .+..+++|+.|+|++|++++.. .+..+++|+.|++++|++.
T Consensus 139 ~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 139 NSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC---
T ss_pred CEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcccC
Confidence 666666665 33 333 4666666666666666666533 5666666777776666654
No 377
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=1.2e-17 Score=204.79 Aligned_cols=168 Identities=23% Similarity=0.290 Sum_probs=115.2
Q ss_pred eeEEEcCCCCccc---------cccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCC
Q 002121 66 VTALGLSTMGLTG---------KLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNL 136 (964)
Q Consensus 66 v~~L~L~~~~l~g---------~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 136 (964)
+..++|+.+.|.+ ..+..+..++.|+.|+|++| .+. .+|..+.++++|++|+|++|.|+ .+|..|++|
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n-~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 269 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNL-QIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNL 269 (727)
T ss_dssp -----------------------------CCCCCCEEECTTS-CCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGG
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCC-CCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCC
Confidence 3445555554443 44677889999999999998 565 77878889999999999999999 889889999
Q ss_pred CCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCc
Q 002121 137 AELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDM 216 (964)
Q Consensus 137 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~ 216 (964)
++|++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+| ..|..+++|+.|+|++|+|++.+|..++....
T Consensus 270 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~ 341 (727)
T 4b8c_D 270 SNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLP------WEFGNLCNLQFLGVEGNPLEKQFLKILTEKSV 341 (727)
T ss_dssp TTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCC------SSTTSCTTCCCEECTTSCCCSHHHHHHHHHHH
T ss_pred CCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccC------hhhhcCCCccEEeCCCCccCCCChHHHhhcch
Confidence 99999999999999 77899999999999999999987 777 34778889999999999998877766654433
Q ss_pred ceeEEEccCCcCcccCCcccCCCCCCcEEEcccC
Q 002121 217 VLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRN 250 (964)
Q Consensus 217 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 250 (964)
.+..|+|++|.+++.+|.. |+.|++++|
T Consensus 342 ~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 342 TGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp HHHHHHHHHCCCCCCCCCC---------------
T ss_pred hhhHHhhccCcccCcCccc------cceeEeecc
Confidence 4445677788887776653 455566665
No 378
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=5.3e-16 Score=172.35 Aligned_cols=138 Identities=16% Similarity=0.148 Sum_probs=101.8
Q ss_pred CCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcc--------------hhHH--------HHHHHHHHHhcCCCCc
Q 002121 628 NFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQ--------------GGLE--------FKTEIELLSRVHHKNL 685 (964)
Q Consensus 628 ~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--------------~~~~--------~~~E~~~l~~l~H~nI 685 (964)
-|++.+.||+|+||.||+|...+|+.||||+++..... .... ...|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 48889999999999999999989999999987532110 0011 2346666777755544
Q ss_pred cceeEEEEeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCC
Q 002121 686 VGLVGFCFEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENL 765 (964)
Q Consensus 686 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~ 765 (964)
....-+ . ....+|||||+++++|.++... .....++.|++.+|.|||+.+ ||||||||.|||+++++
T Consensus 176 ~vp~p~-~-~~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 176 PVPEPI-A-QSRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEK 242 (397)
T ss_dssp SCCCEE-E-EETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEE
T ss_pred CCCeee-e-ccCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCC
Confidence 322211 1 2234799999999998766432 223567899999999999988 99999999999998877
Q ss_pred ----------cEEEeecccceee
Q 002121 766 ----------TAKVADFGLSKLV 778 (964)
Q Consensus 766 ----------~~kl~DFGla~~~ 778 (964)
.+.|+||+-+...
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEET
T ss_pred CcccccccccceEEEEeCCcccC
Confidence 3899999987643
No 379
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.63 E-value=5.8e-16 Score=157.76 Aligned_cols=110 Identities=21% Similarity=0.259 Sum_probs=64.9
Q ss_pred CCcEEEcccCcCccccCc-cccCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEE
Q 002121 241 TLEVLRLDRNALTGKVPT-NLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLI 318 (964)
Q Consensus 241 ~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 318 (964)
+|+.|+|++|.|++..+. .|..+++|++|+|++|+|++..+ .+.++++|++|+|++|+|+ ...+..|.++++|+.|+
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCC-EECSSSSTTCTTCCEEE
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCC-ccCHHHhcCCCCCCEEE
Confidence 455555555555533332 24555555555555555555443 2555555555555555554 44444566666677777
Q ss_pred CCCCccccccChhccCCCCCCEEEcCCcccccc
Q 002121 319 CEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNT 351 (964)
Q Consensus 319 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 351 (964)
|++|+|++..|..|..+++|+.|+|++|++.+.
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 777777777777777777777777777777654
No 380
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=6.8e-16 Score=171.48 Aligned_cols=284 Identities=13% Similarity=0.068 Sum_probs=173.0
Q ss_pred CeeEEEcCCCCccccccCCcCC-CCcccEEecccCCCCC--CCCCCCCCCcccchhhccccccccCcCCcccCC------
Q 002121 65 RVTALGLSTMGLTGKLSGDIGG-LTELRSLDLSYNGGLT--GSLSPRIGDLQKLNILILAGCGFTGNIPDEIGN------ 135 (964)
Q Consensus 65 ~v~~L~L~~~~l~g~~~~~l~~-l~~L~~L~L~~N~~l~--~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~------ 135 (964)
+++.|.++++ +.+..-..+.. +++|+.|||++| .+. ......+ +.++.+.+..|.|. +..|.+
T Consensus 26 ~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n-~i~~~~~~~~~~---~~~~~~~~~~~~I~---~~aF~~~~~~~~ 97 (329)
T 3sb4_A 26 SITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNA-EIKMYSGKAGTY---PNGKFYIYMANFVP---AYAFSNVVNGVT 97 (329)
T ss_dssp HCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEE-EECCEEESSSSS---GGGCCEEECTTEEC---TTTTEEEETTEE
T ss_pred ceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcc-eeEEecCccccc---cccccccccccccC---HHHhcccccccc
Confidence 5667777643 22111112333 778899999988 555 2222222 22344444444332 234445
Q ss_pred --CCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcc---ccccccc
Q 002121 136 --LAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKL---SGTISEQ 210 (964)
Q Consensus 136 --l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l---~g~l~~~ 210 (964)
+++|+.|+|.+ .++...+.+|.++++|+.|+|++|.++ .|+. ..|..+.++..+.+..+.. ...+...
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~-~i~~-----~aF~~~~~l~~l~~~~~~~~~~~~~i~~~ 170 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP-NLLP-----EALADSVTAIFIPLGSSDAYRFKNRWEHF 170 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC-EECT-----TSSCTTTCEEEECTTCTHHHHTSTTTTTS
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc-ccch-----hhhcCCCceEEecCcchhhhhcccccccc
Confidence 77888888877 777566667777888888888877776 3432 3455555555555554322 0133444
Q ss_pred ccCCCccee-EEEccCCcC-cccCCcccCCCCCCcEEEcccCcCccccCccc-cCCCCCCeeeccCccCccCCCC-CCCC
Q 002121 211 LFSPDMVLI-HVLFDGNQL-SGNIPESLGYVQTLEVLRLDRNALTGKVPTNL-NNLTNVNELNLAHNDLKGPFPD-LSQM 286 (964)
Q Consensus 211 ~f~~~~~L~-~L~l~~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~-l~~l 286 (964)
.|.....|+ .+.+....- ...+...--...++..+.+.++-.. .....+ ..+++|+.|+|++|+++.+++. |.++
T Consensus 171 ~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~ 249 (329)
T 3sb4_A 171 AFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQK 249 (329)
T ss_dssp CEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTC
T ss_pred ccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCC
Confidence 454444555 343332211 1001111113455666666655322 111122 2367788888888887777664 7778
Q ss_pred CCCCEEEccCCCCCCCCCCcccCCCCCCc-EEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEE
Q 002121 287 NSLSYVDLSNNSFDPTEAPLWFSTLPSLT-TLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLV 365 (964)
Q Consensus 287 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 365 (964)
.+|+.|+|.+| ++ .+.+..|.++++|+ .|+|.+ .++.+.+.+|.++++|+.|+|++|+++.+.+..|.++++|+.+
T Consensus 250 ~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 250 KYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp TTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 88888888887 55 66777788888888 888887 7777778888888888888888888888888888888888888
Q ss_pred ec
Q 002121 366 DL 367 (964)
Q Consensus 366 ~L 367 (964)
+.
T Consensus 327 y~ 328 (329)
T 3sb4_A 327 YK 328 (329)
T ss_dssp EC
T ss_pred cc
Confidence 64
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=6.9e-16 Score=153.51 Aligned_cols=136 Identities=21% Similarity=0.180 Sum_probs=92.5
Q ss_pred CCCcEEEcccCcCc-cccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEE
Q 002121 240 QTLEVLRLDRNALT-GKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLI 318 (964)
Q Consensus 240 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 318 (964)
++|+.|++++|.++ +.+|..+..+++|++|+|++|.|++. +.+..+++|++|+|++|.++ ..+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIF-GGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCC-SCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCc-hHHHHHHhhCCCCCEEe
Confidence 55666666666666 55666666666666666666666665 55666677777777777775 33566666677777777
Q ss_pred CCCCcccccc-ChhccCCCCCCEEEcCCcccccccC---CCCccCCCCcEEeccCCcceeecc
Q 002121 319 CEFGSLQGRV-PDKLFSYSQIQQVKLRNNAFNNTLD---MGNAVGPLLQLVDLQNNQISAITL 377 (964)
Q Consensus 319 Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~i~~ 377 (964)
|++|++++.. +..+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|.+..++.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 7777776542 2667777777777777777776655 466777777777777777776653
No 382
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.61 E-value=1.4e-14 Score=164.59 Aligned_cols=262 Identities=12% Similarity=0.079 Sum_probs=122.8
Q ss_pred CcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCcccccccc
Q 002121 88 TELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLD 167 (964)
Q Consensus 88 ~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 167 (964)
..++.+.+..+ +...-...|.+. +|+.+.|..+ ++..-..+|.+ .+|+.+.|.+ .++...+.+|.++++|+.++
T Consensus 113 ~~l~~i~ip~~--i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPNS--VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCTT--CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred CCccEEEECCc--cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 44555555432 333334445443 4666665544 44333444544 3466666654 44434445566666666666
Q ss_pred ccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEc
Q 002121 168 LADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRL 247 (964)
Q Consensus 168 Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 247 (964)
|++|+++ .+|.. .|. ..+|+.+.|.++ ++ .|+..+|..+.+|+.+.+..| ++..-..+|.+ .+|+.+.|
T Consensus 187 l~~n~l~-~I~~~-----aF~-~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 187 LSKTKIT-KLPAS-----TFV-YAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp CTTSCCS-EECTT-----TTT-TCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE
T ss_pred cCCCcce-Eechh-----hEe-ecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe
Confidence 6665555 33322 222 345555555533 44 555555555555555555543 44344444444 45555555
Q ss_pred ccCcCccccCccccCCCCCCeeeccCccCc-----cCCC-CCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCC
Q 002121 248 DRNALTGKVPTNLNNLTNVNELNLAHNDLK-----GPFP-DLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEF 321 (964)
Q Consensus 248 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~ 321 (964)
.|.++..-..+|.++++|+.+++.+|.+. .+.+ .|.++++|+.++|.+ .++ .+....|.++++|+.|.|..
T Consensus 256 -p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~L~~l~lp~ 332 (401)
T 4fdw_A 256 -PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRKVTQLTIPA 332 (401)
T ss_dssp -ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCSCCEEEECT
T ss_pred -CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCCccEEEECc
Confidence 23344344455555555555555555443 1111 244444444444442 233 33334444444444444422
Q ss_pred CccccccChhccCCCCCCEEEcCCcccccccCCCCccCC-CCcEEeccCCc
Q 002121 322 GSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGP-LLQLVDLQNNQ 371 (964)
Q Consensus 322 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~ 371 (964)
| ++.+...+|.++ +|+.|++.+|.+.......|..++ .++.|++..|.
T Consensus 333 ~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 333 N-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp T-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred c-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 2 333344444444 444444444444444444444442 34444444433
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=2.4e-15 Score=149.61 Aligned_cols=135 Identities=17% Similarity=0.160 Sum_probs=93.9
Q ss_pred cceeEEEccCCcCc-ccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEE
Q 002121 216 MVLIHVLFDGNQLS-GNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVD 293 (964)
Q Consensus 216 ~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~ 293 (964)
.+|++|++++|+++ +.+|..+..+++|+.|+|++|.+++. ..|..+++|++|+|++|++++.+|. +..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34555566666655 55666666677777777777777744 6677777777777777777775554 44477777777
Q ss_pred ccCCCCCCCCCCcccCCCCCCcEEECCCCccccccC---hhccCCCCCCEEEcCCccccccc
Q 002121 294 LSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVP---DKLFSYSQIQQVKLRNNAFNNTL 352 (964)
Q Consensus 294 Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~ 352 (964)
|++|.+++...+..+..+++|+.|+|++|.+++..+ ..+..+++|+.|++++|.+....
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 777777532233667788888888888888886665 57888888888888888876544
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=2.3e-15 Score=146.50 Aligned_cols=128 Identities=20% Similarity=0.216 Sum_probs=81.6
Q ss_pred CCCcEEEcccCcCc-cccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEE
Q 002121 240 QTLEVLRLDRNALT-GKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLI 318 (964)
Q Consensus 240 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 318 (964)
++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. +.+..+++|++|++++|.++ ..+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVS-GGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCC-SCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCccc-chHHHHhhhCCCCCEEE
Confidence 45556666666665 55555556666666666666666655 45666666666666666665 33555566667777777
Q ss_pred CCCCccccc-cChhccCCCCCCEEEcCCcccccccC---CCCccCCCCcEEeccC
Q 002121 319 CEFGSLQGR-VPDKLFSYSQIQQVKLRNNAFNNTLD---MGNAVGPLLQLVDLQN 369 (964)
Q Consensus 319 Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~ 369 (964)
|++|++++. .+..+..+++|+.|+|++|++++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 777777653 34666777777777777777776655 4566777777777653
No 385
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=4.1e-14 Score=160.87 Aligned_cols=262 Identities=10% Similarity=0.094 Sum_probs=213.9
Q ss_pred eEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEccc
Q 002121 67 TALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNS 146 (964)
Q Consensus 67 ~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 146 (964)
+.+.+.+ +++.+-..+|.+. +|+.++|..| +...-...|.+ .+|+.+.|.+ .++..-+.+|.++++|+.++|++
T Consensus 116 ~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~--i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~ 189 (401)
T 4fdw_A 116 NEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG--LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSK 189 (401)
T ss_dssp SEEECCT-TCCEECTTTTTTC-CCSEEECCTT--CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTT
T ss_pred cEEEECC-ccCEehHhhcccC-CccEEEeCCC--ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCC
Confidence 3344433 4554445577774 7999999876 56566667777 4799999986 77756678899999999999999
Q ss_pred CcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCC
Q 002121 147 NNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGN 226 (964)
Q Consensus 147 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N 226 (964)
|+++.....+|. .++|+.+.|.++ ++ .|+ ...|.++++|+.+++..| ++ .|+..+|.. .+|+.+.+ .|
T Consensus 190 n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~-----~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~-~~L~~i~l-p~ 257 (401)
T 4fdw_A 190 TKITKLPASTFV-YAGIEEVLLPVT-LK-EIG-----SQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE-SGITTVKL-PN 257 (401)
T ss_dssp SCCSEECTTTTT-TCCCSEEECCTT-CC-EEC-----TTTTTTCTTCCCEECCTT-CC-EECTTTTTT-CCCSEEEE-ET
T ss_pred CcceEechhhEe-ecccCEEEeCCc-hh-eeh-----hhHhhCCCCCCEEecCCC-cc-Ccccccccc-CCccEEEe-CC
Confidence 999965555666 689999999855 65 333 467899999999999976 55 889999988 78999999 56
Q ss_pred cCcccCCcccCCCCCCcEEEcccCcCc-----cccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCC
Q 002121 227 QLSGNIPESLGYVQTLEVLRLDRNALT-----GKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFD 300 (964)
Q Consensus 227 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~ 300 (964)
.++.....+|.++++|+.+++.+|.+. ...+.+|.+|++|+.++|. |.++.+... |.++++|+.|+|..| ++
T Consensus 258 ~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~ 335 (401)
T 4fdw_A 258 GVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT 335 (401)
T ss_dssp TCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC
T ss_pred CccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc
Confidence 688778899999999999999998876 4667899999999999999 457776664 999999999999766 65
Q ss_pred CCCCCcccCCCCCCcEEECCCCccccccChhccCCC-CCCEEEcCCccccc
Q 002121 301 PTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYS-QIQQVKLRNNAFNN 350 (964)
Q Consensus 301 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 350 (964)
.+...+|.++ +|+.|++++|.+....+..|.+++ +++.|.+..|.+..
T Consensus 336 -~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~~ 384 (401)
T 4fdw_A 336 -QINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVEK 384 (401)
T ss_dssp -EECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHHH
T ss_pred -EEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHHH
Confidence 6778889999 999999999999988888999985 79999999887653
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.56 E-value=2e-14 Score=146.47 Aligned_cols=125 Identities=22% Similarity=0.271 Sum_probs=79.9
Q ss_pred EEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCC
Q 002121 221 VLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSF 299 (964)
Q Consensus 221 L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l 299 (964)
+++++|+++ .+|..+. ++|+.|+|++|.|+ .+|..|.++++|+.|+|++|.|+++++. |.++++|++|+|++|.|
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 444444444 3343332 45666666666666 5556666666666666666666665553 66666666666666666
Q ss_pred CCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCccccc
Q 002121 300 DPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNN 350 (964)
Q Consensus 300 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 350 (964)
+ ...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 91 ~-~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 91 R-CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp C-BCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred C-EeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 5 4555567777777777777777776666667777778888888877753
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.55 E-value=4.4e-14 Score=141.68 Aligned_cols=129 Identities=20% Similarity=0.216 Sum_probs=67.1
Q ss_pred eEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCC
Q 002121 219 IHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNS 298 (964)
Q Consensus 219 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~ 298 (964)
+.+++++|+++. +|..+ .++|+.|++++|++++..+..|.++++|++|+|++|+|++.++
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----------------- 69 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD----------------- 69 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT-----------------
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh-----------------
Confidence 345555555552 33222 2445555555555554444444445555555555554444433
Q ss_pred CCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCccee
Q 002121 299 FDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISA 374 (964)
Q Consensus 299 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (964)
..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++
T Consensus 70 -------~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 70 -------GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp -------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred -------hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 334455555555555555555555555555666666666666655555555556666666666665543
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.54 E-value=4.1e-15 Score=144.72 Aligned_cols=128 Identities=17% Similarity=0.171 Sum_probs=99.7
Q ss_pred cceeEEEccCCcCc-ccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCC-CCCCCCCCEEE
Q 002121 216 MVLIHVLFDGNQLS-GNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPD-LSQMNSLSYVD 293 (964)
Q Consensus 216 ~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~ 293 (964)
.+|+.|++++|+++ +.+|..+..+++|+.|++++|.+++. ..+.++++|++|+|++|.+++.+|. +..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45667777777776 66777777888888888888888855 6778888888888888888875554 55588888888
Q ss_pred ccCCCCCCCCCCcccCCCCCCcEEECCCCccccccC---hhccCCCCCCEEEcCC
Q 002121 294 LSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVP---DKLFSYSQIQQVKLRN 345 (964)
Q Consensus 294 Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~ 345 (964)
+++|++++...+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888888632234678889999999999999988776 6788899999998864
No 389
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.54 E-value=4.2e-14 Score=141.87 Aligned_cols=131 Identities=17% Similarity=0.221 Sum_probs=94.8
Q ss_pred CeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccC
Q 002121 194 KHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAH 273 (964)
Q Consensus 194 ~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 273 (964)
+.+++++|+++ .+|..++ .+|++|++++|++++..+..|..+++|++|+|++|.|++..+..|.++++|++|+|++
T Consensus 10 ~~l~~~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCc-cCCCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 45566666665 5554433 4677888888888877777788889999999999999877777788888999999999
Q ss_pred ccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccC
Q 002121 274 NDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVP 329 (964)
Q Consensus 274 N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 329 (964)
|+|++.++. +..+++|++|+|++|.++ ...+..+..+++|+.|+|++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 888877765 567777777777777775 4444455666666666666666665443
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=2.5e-14 Score=143.37 Aligned_cols=136 Identities=17% Similarity=0.167 Sum_probs=83.3
Q ss_pred cCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCc
Q 002121 236 LGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLT 315 (964)
Q Consensus 236 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~ 315 (964)
+..+.+|+.|++++|+++ .+|......++|++|+|++|.|++. +.+..+++|++|+|++|.++ ...+..|..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCccc-ccCcchhhcCCCCC
Confidence 344556666666666666 3333222223666666666666655 45666666666666666665 33344456667777
Q ss_pred EEECCCCccccccCh--hccCCCCCCEEEcCCcccccccCC---CCccCCCCcEEeccCCcceee
Q 002121 316 TLICEFGSLQGRVPD--KLFSYSQIQQVKLRNNAFNNTLDM---GNAVGPLLQLVDLQNNQISAI 375 (964)
Q Consensus 316 ~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~i 375 (964)
.|+|++|+|.. +|. .+..+++|+.|+|++|+++..... .+..+++|+.||+++|.+...
T Consensus 92 ~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~~~ 155 (176)
T 1a9n_A 92 ELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 (176)
T ss_dssp EEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHHHH
T ss_pred EEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHHHH
Confidence 77777777643 343 666777777777777777644322 366777788888877777654
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=8.2e-16 Score=157.49 Aligned_cols=133 Identities=21% Similarity=0.232 Sum_probs=67.0
Q ss_pred ccchhhccccccccCcCCc------ccCCCCCccEEEcccCcccCcCCCcCCCccccccccccccccccccCcccCCCCc
Q 002121 113 QKLNILILAGCGFTGNIPD------EIGNLAELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPG 186 (964)
Q Consensus 113 ~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~ 186 (964)
..++.++++.+.++|.+|. .|..+++|++|+|++|.+++ +| .+.++++|++|+|++|+++ .+| ..
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~------~~ 88 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIE------NL 88 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCS------SH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-ccc------ch
Confidence 3444555555555554444 55556666666666666653 44 5555566666666666655 344 22
Q ss_pred cccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCC-cccCCCCCCcEEEcccCcCccccC
Q 002121 187 LDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIP-ESLGYVQTLEVLRLDRNALTGKVP 257 (964)
Q Consensus 187 l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p 257 (964)
+..+++|+.|++++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+++.+|
T Consensus 89 ~~~~~~L~~L~L~~N~l~~-l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 89 DAVADTLEELWISYNQIAS-LS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHHHHCSEEEEEEEECCC-HH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred hhcCCcCCEEECcCCcCCc-CC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 3444555555555555542 22 12333344444444444443211 245555566666666666554443
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=1.7e-13 Score=136.38 Aligned_cols=104 Identities=17% Similarity=0.119 Sum_probs=56.4
Q ss_pred CeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCc
Q 002121 267 NELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNN 346 (964)
Q Consensus 267 ~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 346 (964)
+.|++++|.|+.++..+. ++|++|+|++|.|+ ...+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLASVPTGIP--TTTQVLYLYDNQIT-KLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCccCccCC--CCCcEEEcCCCcCC-ccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 344444444444333321 44445555555554 334444555555555555555555555555566666666666666
Q ss_pred ccccccCCCCccCCCCcEEeccCCcce
Q 002121 347 AFNNTLDMGNAVGPLLQLVDLQNNQIS 373 (964)
Q Consensus 347 ~l~~~~~~~~~~l~~L~~L~L~~N~l~ 373 (964)
+|++..+..|..+++|+.|+|++|+|+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 666665555666666666666655554
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.45 E-value=8.2e-14 Score=139.62 Aligned_cols=129 Identities=15% Similarity=0.154 Sum_probs=82.4
Q ss_pred cceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCC-CCCCCCCEEEc
Q 002121 216 MVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDL-SQMNSLSYVDL 294 (964)
Q Consensus 216 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l-~~l~~L~~L~L 294 (964)
.+|++|++++|+++. +|......++|++|+|++|.|++. ..|..+++|++|+|++|.|++.++.+ ..+++|++|+|
T Consensus 19 ~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp TSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 344444444444442 233222223677777777777643 56667777777777777777666553 66777777777
Q ss_pred cCCCCCCCCCCc--ccCCCCCCcEEECCCCccccccCh----hccCCCCCCEEEcCCccccc
Q 002121 295 SNNSFDPTEAPL--WFSTLPSLTTLICEFGSLQGRVPD----KLFSYSQIQQVKLRNNAFNN 350 (964)
Q Consensus 295 s~N~l~~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~ 350 (964)
++|+++ ..|. .+..+++|+.|+|++|.+.. +|. .+..+++|+.|++++|.+..
T Consensus 96 ~~N~i~--~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 96 TNNSLV--ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CSCCCC--CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCcCC--cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 777773 3333 67777788888888888774 344 37778888888888887654
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.44 E-value=4.2e-16 Score=159.64 Aligned_cols=161 Identities=19% Similarity=0.218 Sum_probs=95.9
Q ss_pred cccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCC
Q 002121 187 LDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNV 266 (964)
Q Consensus 187 l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 266 (964)
+.....++.++++.|.++|.+|. ++ .+|..+..+++|++|+|++|.+++ +| .+.++++|
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~------------------l~-~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L 72 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPP------------------IE-KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENL 72 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTT------------------CC-CCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTC
T ss_pred HHhcccccCcchheeEeccccCc------------------Hh-hhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCC
Confidence 34455666666666666654442 11 222356666666666666666664 45 66666666
Q ss_pred CeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccC-hhccCCCCCCEEEcCC
Q 002121 267 NELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVP-DKLFSYSQIQQVKLRN 345 (964)
Q Consensus 267 ~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~ 345 (964)
++|+|++|.|+.++..+..+++|++|+|++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|+|++
T Consensus 73 ~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~--l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~ 149 (198)
T 1ds9_A 73 RILSLGRNLIKKIENLDAVADTLEELWISYNQIAS--LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAG 149 (198)
T ss_dssp CEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC--HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECS
T ss_pred CEEECCCCCcccccchhhcCCcCCEEECcCCcCCc--CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecC
Confidence 66666666666544434445666666666666642 23 46666667777777777665433 4566677777777777
Q ss_pred cccccccCCC----------CccCCCCcEEeccCCcce
Q 002121 346 NAFNNTLDMG----------NAVGPLLQLVDLQNNQIS 373 (964)
Q Consensus 346 N~l~~~~~~~----------~~~l~~L~~L~L~~N~l~ 373 (964)
|++.+..+.. +..+++|+.|| +|.++
T Consensus 150 N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 150 NPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp CHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 7776655543 55666666665 45444
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=2.9e-12 Score=128.00 Aligned_cols=87 Identities=20% Similarity=0.136 Sum_probs=46.6
Q ss_pred CCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEe
Q 002121 287 NSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVD 366 (964)
Q Consensus 287 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 366 (964)
++|++|+|++|+|+ ...|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 33 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 111 (174)
T 2r9u_A 33 TDKQRLWLNNNQIT-KLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIY 111 (174)
T ss_dssp TTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEEeCCCCcc-ccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEE
Confidence 33444444444443 33344455555555555555555554444455566666666666666655555566666666666
Q ss_pred ccCCccee
Q 002121 367 LQNNQISA 374 (964)
Q Consensus 367 L~~N~l~~ 374 (964)
|++|+|++
T Consensus 112 L~~N~~~c 119 (174)
T 2r9u_A 112 LYNNPWDC 119 (174)
T ss_dssp CCSSCBCT
T ss_pred eCCCCccc
Confidence 66665543
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=2.1e-12 Score=129.07 Aligned_cols=111 Identities=21% Similarity=0.243 Sum_probs=91.9
Q ss_pred ccEEecCCCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCC
Q 002121 57 EGVTCNNSRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNL 136 (964)
Q Consensus 57 ~gv~C~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 136 (964)
.+..|. .+.+++++++++ .+|..+. ++|++|+|++| .+.+..|..|.++++|++|+|++|+|++..+..|.++
T Consensus 8 ~~C~C~---~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l 80 (174)
T 2r9u_A 8 SQCSCD---QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNN-QITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKL 80 (174)
T ss_dssp TTSEEC---SSEEECCSSCCS-SCCSCCC--TTCSEEECCSS-CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCEEC---CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCC-CccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCc
Confidence 455664 367899999985 6777664 88999999999 7888888889999999999999999986655667889
Q ss_pred CCccEEEcccCcccCcCCCcCCCccccccccccccccc
Q 002121 137 AELSFLALNSNNFSGRIPPSLGKLSQLYWLDLADNQLT 174 (964)
Q Consensus 137 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 174 (964)
++|++|+|++|+|++..+..|.++++|++|+|++|.+.
T Consensus 81 ~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 81 TQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred chhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 99999999999999666666888899999999999887
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.35 E-value=3.4e-12 Score=126.97 Aligned_cols=86 Identities=22% Similarity=0.273 Sum_probs=46.1
Q ss_pred CCCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEE
Q 002121 264 TNVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVK 342 (964)
Q Consensus 264 ~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 342 (964)
++|++|+|++|+|+++++. +.++++|++|+|++|+|+ ...+..|..+++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 108 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIW 108 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcC-ccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEE
Confidence 3444444444444444332 444444444444444444 33444455556666666666666655555566666666666
Q ss_pred cCCccccc
Q 002121 343 LRNNAFNN 350 (964)
Q Consensus 343 L~~N~l~~ 350 (964)
|++|++..
T Consensus 109 L~~N~~~c 116 (170)
T 3g39_A 109 LLNNPWDC 116 (170)
T ss_dssp CCSSCBCT
T ss_pred eCCCCCCC
Confidence 66666653
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.33 E-value=8.6e-11 Score=133.67 Aligned_cols=302 Identities=10% Similarity=0.016 Sum_probs=151.4
Q ss_pred CeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEc
Q 002121 65 RVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLAL 144 (964)
Q Consensus 65 ~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 144 (964)
.++.+.|.. +++.+-..+|.++++|+.++|..+ +...-...|.++.+|+.+.+..+ +......+|.+...++....
T Consensus 72 ~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~--l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~ 147 (394)
T 4fs7_A 72 KVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS--VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIP 147 (394)
T ss_dssp TEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT--CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECC
T ss_pred CceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC--ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccC
Confidence 455555542 344333445555555555555433 23233344555555555544432 22122223333322222211
Q ss_pred ccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEcc
Q 002121 145 NSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFD 224 (964)
Q Consensus 145 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~ 224 (964)
... ......+|.++++|+.+.+.++.. .+ ....|.++.+|+.+.+..| ++ .++...|.....|+.+.+.
T Consensus 148 ~~~--~~i~~~aF~~c~~L~~i~l~~~~~--~I-----~~~~F~~c~~L~~i~l~~~-~~-~I~~~~F~~~~~L~~i~~~ 216 (394)
T 4fs7_A 148 EGV--TVIGDEAFATCESLEYVSLPDSME--TL-----HNGLFSGCGKLKSIKLPRN-LK-IIRDYCFAECILLENMEFP 216 (394)
T ss_dssp TTC--CEECTTTTTTCTTCCEEECCTTCC--EE-----CTTTTTTCTTCCBCCCCTT-CC-EECTTTTTTCTTCCBCCCC
T ss_pred ccc--cccchhhhcccCCCcEEecCCccc--ee-----ccccccCCCCceEEEcCCC-ce-EeCchhhccccccceeecC
Confidence 111 112234455566666666554322 12 2234555566666666554 33 5555556655556555554
Q ss_pred CCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCCC
Q 002121 225 GNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTEA 304 (964)
Q Consensus 225 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 304 (964)
.+... +.+.+....+|+.+.+..+ ++..-...|.++.+|+.+.+..+...-....+..+..|+.+.+..+.+ .
T Consensus 217 ~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i----~ 289 (394)
T 4fs7_A 217 NSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV----P 289 (394)
T ss_dssp TTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE----C
T ss_pred CCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee----c
Confidence 44322 2222333445555555432 232444556666666666666654443333456666666666555443 2
Q ss_pred CcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCCCcc--
Q 002121 305 PLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIK-- 382 (964)
Q Consensus 305 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~-- 382 (964)
...|..+.+|+.+.+..+ ++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.++|..| ++.|....+..
T Consensus 290 ~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 290 EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 334666666666666544 55555566666677777776543 66666666767777777777655 66665544432
Q ss_pred -cceeEeecC
Q 002121 383 -NYTLILVGN 391 (964)
Q Consensus 383 -l~~l~l~~N 391 (964)
++.+.|..|
T Consensus 367 ~L~~i~lp~~ 376 (394)
T 4fs7_A 367 NLKKVELPKR 376 (394)
T ss_dssp TCCEEEEEGG
T ss_pred CCCEEEECCC
Confidence 455555443
No 399
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.30 E-value=9.5e-12 Score=133.12 Aligned_cols=148 Identities=15% Similarity=0.141 Sum_probs=116.5
Q ss_pred HHHhhcCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcC-CCCccceeEEEEeeCceEE
Q 002121 622 LKKCSNNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVH-HKNLVGLVGFCFEQGEQML 700 (964)
Q Consensus 622 l~~~~~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~l 700 (964)
+......|.....++.|+.+.||++... |+.+++|+...........+.+|+++++.+. |..+.++++++.+.+..|+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3445567888888898999999999864 6899999987532223346899999999995 6778899999988888999
Q ss_pred EEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 002121 701 VYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELA----------------------------------- 745 (964)
Q Consensus 701 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------- 745 (964)
||||++|.+|.+.+.. ......++.+++++|+.||+..
T Consensus 88 v~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp EEECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EEEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 9999999999876421 1234578899999999999811
Q ss_pred ---------------------CCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 746 ---------------------NPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 746 ---------------------~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
.+.++|+|++|.||+++++..+.|+||+.+..
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13489999999999998766668999997753
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=9.1e-12 Score=139.15 Aligned_cols=130 Identities=18% Similarity=0.188 Sum_probs=67.0
Q ss_pred eccCc-cCccCCCCCCCCCCCCEEEccC-CCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcc
Q 002121 270 NLAHN-DLKGPFPDLSQMNSLSYVDLSN-NSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNA 347 (964)
Q Consensus 270 ~Ls~N-~l~~~~~~l~~l~~L~~L~Ls~-N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 347 (964)
+++++ .|+.+++ +..+++|++|+|++ |.|+ ...+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 14 ~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALDSLHH-LPGAENLTELYIENQQHLQ-HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCC-EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCCccCC-CCCCCCeeEEEccCCCCCC-CcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 44444 4444333 44444444444443 4443 3333445555555555555555555555555556666666666665
Q ss_pred cccccCCCCccCCCCcEEeccCCcceeeccCCCcccceeEeecCC-cccccccccCccccCCCCCcccccccccCCCCC
Q 002121 348 FNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIKNYTLILVGNP-VCTATLANTNYCQLQQPTTKAYSTSLANCGGKS 425 (964)
Q Consensus 348 l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~l~l~~Np-~c~~~l~~~~~~~~~~~~~~~~~~~~~~c~~~~ 425 (964)
|++.++..+..++ |+ .|+|.+|+ .|+|.+..+..|...... . .......|..|.
T Consensus 92 l~~~~~~~~~~~~-L~---------------------~l~l~~N~~~c~c~l~~~~~~~~~~~~-~-l~~~~~~C~~~~ 146 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQ---------------------ELVLSGNPLHCSCALRWLQRWEEEGLG-G-VPEQKLQCHGQG 146 (347)
T ss_dssp CSCCCSTTTCSCC-CC---------------------EEECCSSCCCCCGGGHHHHHHHHTTCS-S-CGGGCCCCSSSS
T ss_pred cceeCHHHcccCC-ce---------------------EEEeeCCCccCCCccHHHHHHHHhCcc-c-ccccCCCCCCCh
Confidence 5555444444433 44 44555555 578888877777433221 1 123445666554
No 401
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.21 E-value=2.9e-11 Score=128.86 Aligned_cols=138 Identities=18% Similarity=0.167 Sum_probs=102.9
Q ss_pred cCCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCc--cceeEEEEeeCceEEEEEe
Q 002121 627 NNFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNL--VGLVGFCFEQGEQMLVYEF 704 (964)
Q Consensus 627 ~~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI--v~l~~~~~~~~~~~lV~E~ 704 (964)
.++......+.|..+.||++...+|+.+++|+.... ....+.+|+++++.+.+.++ .+++++..+.+..++||||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 344433333455669999998877888999997654 22468899999999975554 5688888877788999999
Q ss_pred ccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 002121 705 MANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELA--------------------------------------- 745 (964)
Q Consensus 705 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------- 745 (964)
++|.+|. ... . ....++.++++.|+.||+..
T Consensus 97 i~G~~l~--~~~-----~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 97 VPGQDLL--SSH-----L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp CSSEETT--TSC-----C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred cCCcccC--cCc-----C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 9998884 221 1 12367788888888888643
Q ss_pred ----------------CCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 746 ----------------NPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 746 ----------------~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
...++|||++|.||+++++..+.|+|||.+..
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12299999999999998876678999998764
No 402
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.18 E-value=7.6e-10 Score=125.82 Aligned_cols=287 Identities=11% Similarity=0.070 Sum_probs=215.6
Q ss_pred CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEE
Q 002121 64 SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLA 143 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 143 (964)
.+++.++|+.+ ++-.-..+|.+++.|+.+.+..+ +...-...|.+...+........ ......+|.++++|+.+.
T Consensus 94 ~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~--l~~i~~~aF~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~ 168 (394)
T 4fs7_A 94 SKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM--LKSIGVEAFKGCDFKEITIPEGV--TVIGDEAFATCESLEYVS 168 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT--CCEECTTTTTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEE
T ss_pred CCCcEEEeCCC-ceEccchhhcccccchhhcccCc--eeeecceeeecccccccccCccc--cccchhhhcccCCCcEEe
Confidence 46888888754 66455568999999999888765 44444556766654444333332 223456799999999999
Q ss_pred cccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEc
Q 002121 144 LNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLF 223 (964)
Q Consensus 144 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l 223 (964)
|.++..+ .....|.++++|+.+++..| ++ .+ ....+..+..|+.+.+..+... +....| ....|+.+.+
T Consensus 169 l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~-~I-----~~~~F~~~~~L~~i~~~~~~~~--i~~~~~-~~~~l~~i~i 237 (394)
T 4fs7_A 169 LPDSMET-LHNGLFSGCGKLKSIKLPRN-LK-II-----RDYCFAECILLENMEFPNSLYY--LGDFAL-SKTGVKNIII 237 (394)
T ss_dssp CCTTCCE-ECTTTTTTCTTCCBCCCCTT-CC-EE-----CTTTTTTCTTCCBCCCCTTCCE--ECTTTT-TTCCCCEEEE
T ss_pred cCCccce-eccccccCCCCceEEEcCCC-ce-Ee-----CchhhccccccceeecCCCceE--eehhhc-ccCCCceEEE
Confidence 9876543 66778999999999999876 44 23 3356888889999888776542 333333 3467888888
Q ss_pred cCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCCEEEccCCCCCCCC
Q 002121 224 DGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLSYVDLSNNSFDPTE 303 (964)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 303 (964)
..+ ++......|..+..|+.+.+..+..+ .....|.++..|+.+.+..+.+.. ..+..+.+|+.+.+.++ ++ .+
T Consensus 238 p~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~--~~F~~~~~L~~i~l~~~-i~-~I 311 (394)
T 4fs7_A 238 PDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPE--KTFYGCSSLTEVKLLDS-VK-FI 311 (394)
T ss_dssp CTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECT--TTTTTCTTCCEEEECTT-CC-EE
T ss_pred CCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeecc--ccccccccccccccccc-cc-ee
Confidence 644 44455677888999999999988665 777889999999999887765321 24788999999999876 54 66
Q ss_pred CCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceee
Q 002121 304 APLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAI 375 (964)
Q Consensus 304 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i 375 (964)
...+|.++.+|+.++|..+ ++.+...+|.++.+|+.++|..| ++.+...+|.++.+|+.++|.+| ++.+
T Consensus 312 ~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~~~ 380 (394)
T 4fs7_A 312 GEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LEQY 380 (394)
T ss_dssp CTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GGGG
T ss_pred chhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CEEh
Confidence 6778999999999999754 87778889999999999999887 88888999999999999999755 4443
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.18 E-value=2e-11 Score=136.30 Aligned_cols=103 Identities=18% Similarity=0.179 Sum_probs=66.6
Q ss_pred eEccCC-cccccccccccCCCcceeEEEccC-CcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccC
Q 002121 196 FHFNKN-KLSGTISEQLFSPDMVLIHVLFDG-NQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAH 273 (964)
Q Consensus 196 L~L~~N-~l~g~l~~~~f~~~~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 273 (964)
++++++ +|+ .+|. +..+.+|++|+|++ |+|++..+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 13 v~~~~~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp EECCSSCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEcCCCCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 445554 554 4554 44555566666664 666666666677777777777777777777777777777777777777
Q ss_pred ccCccCCCCCCCCCCCCEEEccCCCCCC
Q 002121 274 NDLKGPFPDLSQMNSLSYVDLSNNSFDP 301 (964)
Q Consensus 274 N~l~~~~~~l~~l~~L~~L~Ls~N~l~~ 301 (964)
|+|+++++.......|+.|+|++|+|.+
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccC
Confidence 7777766653332337777777777753
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.17 E-value=3.9e-13 Score=151.28 Aligned_cols=38 Identities=21% Similarity=0.158 Sum_probs=19.5
Q ss_pred CCccEEEcccCcccCcCCCcCCCc-----cccccccccccccc
Q 002121 137 AELSFLALNSNNFSGRIPPSLGKL-----SQLYWLDLADNQLT 174 (964)
Q Consensus 137 ~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~ 174 (964)
++|+.|+|++|.|+......+..+ ++|++|+|++|.++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~ 114 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLD 114 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCC
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCC
Confidence 456666776666653322222221 45555555555554
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.16 E-value=2.1e-09 Score=122.18 Aligned_cols=289 Identities=11% Similarity=0.087 Sum_probs=137.1
Q ss_pred eeEEEcCCCCccccccCCcCCCCcccEEecccCC--CCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEE
Q 002121 66 VTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNG--GLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLA 143 (964)
Q Consensus 66 v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~--~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 143 (964)
++.+.+.. .++.+-..+|.++++|+.+.+..|. .+...-...|..+.+|+.+.+..+ ++......|..+.+|+.+.
T Consensus 66 L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 34444432 2333333445555555555554431 122222334445555555554432 2323334455555555555
Q ss_pred cccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEc
Q 002121 144 LNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLF 223 (964)
Q Consensus 144 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l 223 (964)
+..+. .......|.++.+|+.+.+.++ ++ .|. ...|.. ..|+.+.+..+-. .+....|.....+.....
T Consensus 144 lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~-~I~-----~~aF~~-~~l~~i~ip~~~~--~i~~~af~~c~~l~~~~~ 212 (394)
T 4gt6_A 144 IPEGV-TSVADGMFSYCYSLHTVTLPDS-VT-AIE-----ERAFTG-TALTQIHIPAKVT--RIGTNAFSECFALSTITS 212 (394)
T ss_dssp CCTTC-CEECTTTTTTCTTCCEEECCTT-CC-EEC-----TTTTTT-CCCSEEEECTTCC--EECTTTTTTCTTCCEEEE
T ss_pred cccee-eeecccceecccccccccccce-ee-Eec-----cccccc-cceeEEEECCccc--ccccchhhhccccceecc
Confidence 54332 2233444555555555555433 22 111 112221 3344444433321 233344444444444443
Q ss_pred cCCcCcccCCcc-------------cCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCCCCCCCCCCC
Q 002121 224 DGNQLSGNIPES-------------LGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFPDLSQMNSLS 290 (964)
Q Consensus 224 ~~N~l~~~~p~~-------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~ 290 (964)
..+......... +.....+..+.+. +.++..-..+|.++.+|+.+.+.++..+--...+.++.+|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~ 291 (394)
T 4gt6_A 213 DSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQ 291 (394)
T ss_dssp CCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCC
T ss_pred cccccccccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccceecCcccccccccc
Confidence 333222110000 0011122222222 12222334456666777777766554332222366667777
Q ss_pred EEEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCC
Q 002121 291 YVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNN 370 (964)
Q Consensus 291 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 370 (964)
.+.+.. .++ .+....|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+++.+|
T Consensus 292 ~i~l~~-~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 292 DIEFSS-RIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp EEECCT-TCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred cccCCC-ccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 777753 343 445556777777777777543 55555666777777777777544 66666667777777777777766
Q ss_pred cc
Q 002121 371 QI 372 (964)
Q Consensus 371 ~l 372 (964)
..
T Consensus 368 ~~ 369 (394)
T 4gt6_A 368 RS 369 (394)
T ss_dssp HH
T ss_pred ee
Confidence 54
No 406
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.13 E-value=5.6e-13 Score=149.97 Aligned_cols=140 Identities=20% Similarity=0.158 Sum_probs=68.7
Q ss_pred cCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCccc-----CCCCCCcEEEcccCcCcc----ccCcccc
Q 002121 191 KNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESL-----GYVQTLEVLRLDRNALTG----KVPTNLN 261 (964)
Q Consensus 191 ~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~----~~p~~~~ 261 (964)
++|+.|+|++|.++..-...++..+.+|++|+|++|+|+......+ ...++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 3555555555555432222333334455555555555543332222 234566777777776653 2344445
Q ss_pred CCCCCCeeeccCccCccCC-----CCCCCCCCCCEEEccCCCCCCC---CCCcccCCCCCCcEEECCCCccccccCh
Q 002121 262 NLTNVNELNLAHNDLKGPF-----PDLSQMNSLSYVDLSNNSFDPT---EAPLWFSTLPSLTTLICEFGSLQGRVPD 330 (964)
Q Consensus 262 ~l~~L~~L~Ls~N~l~~~~-----~~l~~l~~L~~L~Ls~N~l~~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 330 (964)
.+++|++|+|++|.|+... ..+..+++|++|+|++|.|+.. .+...+...++|++|+|++|.|+.....
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~ 257 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQ 257 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHH
Confidence 6667777777777766422 1234445556666666655410 1111222334455555555554443333
No 407
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.01 E-value=1.9e-08 Score=114.17 Aligned_cols=290 Identities=10% Similarity=0.081 Sum_probs=177.7
Q ss_pred CCcCCCC-cccEEecccCCCCCCCCCCCCCCcccchhhcccccc---ccCcCCcccCCCCCccEEEcccCcccCcCCCcC
Q 002121 82 GDIGGLT-ELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCG---FTGNIPDEIGNLAELSFLALNSNNFSGRIPPSL 157 (964)
Q Consensus 82 ~~l~~l~-~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 157 (964)
.+|.+.. .|+.+.|-.+ +...-..+|.++.+|+.+.+..|. ++..-..+|.++.+|+.+.+..+ ++.....+|
T Consensus 57 ~aF~~~~~~L~sI~iP~s--vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT--VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTCCSCCCEEEECTT--CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred hhccCCCCcCEEEEECCC--eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 3455553 4666666543 444445566666666666666543 44333445666666666655443 332444556
Q ss_pred CCccccccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcccCCcccC
Q 002121 158 GKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSGNIPESLG 237 (964)
Q Consensus 158 ~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~~~p~~~~ 237 (964)
.++.+|+.+.+..+. . .+ ....+..+.+|+.+.+..+ ++ .+...+|.. ..|+.+.+..+- +.....+|.
T Consensus 134 ~~c~~L~~i~lp~~~-~-~I-----~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF~~-~~l~~i~ip~~~-~~i~~~af~ 202 (394)
T 4gt6_A 134 HHCEELDTVTIPEGV-T-SV-----ADGMFSYCYSLHTVTLPDS-VT-AIEERAFTG-TALTQIHIPAKV-TRIGTNAFS 202 (394)
T ss_dssp TTCTTCCEEECCTTC-C-EE-----CTTTTTTCTTCCEEECCTT-CC-EECTTTTTT-CCCSEEEECTTC-CEECTTTTT
T ss_pred hhhccccccccccee-e-ee-----cccceecccccccccccce-ee-Eeccccccc-cceeEEEECCcc-cccccchhh
Confidence 666666666665332 1 11 2234555666666666544 33 455555543 346666655432 224445556
Q ss_pred CCCCCcEEEcccCcCccccCccc--------------cCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCCCCC
Q 002121 238 YVQTLEVLRLDRNALTGKVPTNL--------------NNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSFDPT 302 (964)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~~p~~~--------------~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ 302 (964)
.+.+|+......+... .+...+ .....+..+.+.+ .++.+.. .|.++..|+.+.+.++.. .
T Consensus 203 ~c~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~--~ 278 (394)
T 4gt6_A 203 ECFALSTITSDSESYP-AIDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVV--S 278 (394)
T ss_dssp TCTTCCEEEECCSSSC-BSSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCC--E
T ss_pred hccccceecccccccc-cccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccc--e
Confidence 6666666655544433 111111 1112222222221 1222222 388899999999987765 5
Q ss_pred CCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCCCc-
Q 002121 303 EAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGI- 381 (964)
Q Consensus 303 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~- 381 (964)
+....|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.|.++ ++.|....+.
T Consensus 279 I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~ 355 (394)
T 4gt6_A 279 IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSN 355 (394)
T ss_dssp ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTT
T ss_pred ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhC
Confidence 667789999999999996 5677788889999999999999865 88888899999999999999755 8888766554
Q ss_pred --ccceeEeecCC
Q 002121 382 --KNYTLILVGNP 392 (964)
Q Consensus 382 --~l~~l~l~~Np 392 (964)
.|+.+.+.+|.
T Consensus 356 C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 356 CTALNNIEYSGSR 368 (394)
T ss_dssp CTTCCEEEESSCH
T ss_pred CCCCCEEEECCce
Confidence 47788888876
No 408
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.00 E-value=9.5e-10 Score=123.33 Aligned_cols=142 Identities=15% Similarity=0.271 Sum_probs=107.6
Q ss_pred cceeecCCcEEEEEEEecCCcEEEEEEec--CCC-cchhHHHHHHHHHHHhcC--CCCccceeEEEEee---CceEEEEE
Q 002121 632 SNEIGSGGYGKVYRGMLSDGQVVAIKRAQ--QGS-MQGGLEFKTEIELLSRVH--HKNLVGLVGFCFEQ---GEQMLVYE 703 (964)
Q Consensus 632 ~~~lG~G~fg~Vy~~~~~~g~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~---~~~~lV~E 703 (964)
.+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 5678999999999998754 678888775 322 122346889999999997 45578899988766 45899999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELA-------------------------------------- 745 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------- 745 (964)
|++|..+.+... ..++..++..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 122 FVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred ecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999987754221 23677888999999999999999731
Q ss_pred -----------------CCCeeccCCCCCcEEECCCCc--EEEeecccceee
Q 002121 746 -----------------NPPIIHRDVKSTNILLDENLT--AKVADFGLSKLV 778 (964)
Q Consensus 746 -----------------~~~ivH~Dlk~~NILl~~~~~--~kl~DFGla~~~ 778 (964)
.+.++|||+++.|||++.++. +.|+||+.+..-
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 246899999999999997753 689999998753
No 409
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.92 E-value=7.4e-10 Score=121.14 Aligned_cols=187 Identities=19% Similarity=0.200 Sum_probs=122.7
Q ss_pred cceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcC-CCC--ccceeEEEEeeC---ceEEEEEec
Q 002121 632 SNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVH-HKN--LVGLVGFCFEQG---EQMLVYEFM 705 (964)
Q Consensus 632 ~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~n--Iv~l~~~~~~~~---~~~lV~E~~ 705 (964)
.+.++.|....||+.. ..+++|+.... .....+.+|+++|+.+. +.. +.+++......+ ..|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 3568999999999853 46889986532 33457899999999884 433 334444433333 348999999
Q ss_pred cCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 002121 706 ANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELA---------------------------------------- 745 (964)
Q Consensus 706 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------- 745 (964)
+|.+|.+... ..++..++..++.++++.|+.||+..
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988875332 13667778888889999888888611
Q ss_pred ---------------CCCeeccCCCCCcEEECC--CCcEEEeecccceeecCCCCCcee------------ecccccCcc
Q 002121 746 ---------------NPPIIHRDVKSTNILLDE--NLTAKVADFGLSKLVSDSSKGHVS------------TQVKGTMGY 796 (964)
Q Consensus 746 ---------------~~~ivH~Dlk~~NILl~~--~~~~kl~DFGla~~~~~~~~~~~~------------~~~~gt~~y 796 (964)
.+.++|+|++|.||++++ +..+.|+||+.+..-+....-... ......+++
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 245899999999999998 556799999998764321000000 000001111
Q ss_pred cC-ccccccCCCCCchhHHHHHHHHHHHHhCCCCC
Q 002121 797 LD-PEYYMTQQLTEKSDVYSFGVVMLELITAKQPI 830 (964)
Q Consensus 797 ~a-PE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~ 830 (964)
.. |+.... .....+.|++|+++|++.+|..++
T Consensus 255 ~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 12 222111 122368999999999999998775
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.86 E-value=1.6e-07 Score=105.90 Aligned_cols=295 Identities=11% Similarity=0.093 Sum_probs=174.5
Q ss_pred CCeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEE
Q 002121 64 SRVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLA 143 (964)
Q Consensus 64 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 143 (964)
.+++.+.+.. +++.+-..+|.++++|+.++|..+ +...-..+|.+. +|+.+.+..+ ++..-..+|.. .+|+.++
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~--v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~ 119 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST--VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFE 119 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT--CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEE
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc--ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCccccc
Confidence 3566666653 455444556777777777777543 443444455554 4555555432 44222233433 4677777
Q ss_pred cccCcccCcCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeEccCCccccccc-----------cccc
Q 002121 144 LNSNNFSGRIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTIS-----------EQLF 212 (964)
Q Consensus 144 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~-----------~~~f 212 (964)
+..+... .....|.+. +|+.+.+..+ ++ .+....+....+++.+.+..+....... ...|
T Consensus 120 lp~~~~~-i~~~~F~~~-~l~~~~~~~~-v~------~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (379)
T 4h09_A 120 FPGATTE-IGNYIFYNS-SVKRIVIPKS-VT------TIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESY 190 (379)
T ss_dssp CCTTCCE-ECTTTTTTC-CCCEEEECTT-CC------EECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEEC
T ss_pred CCCcccc-ccccccccc-eeeeeeccce-ee------ccccchhcccccccccccccccceeecccceecccccceeccc
Confidence 7654322 333344433 4444444332 11 1222345566666666655443321100 1112
Q ss_pred CCCcceeEEEccCCcCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCC-CCCCCCCCCE
Q 002121 213 SPDMVLIHVLFDGNQLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSY 291 (964)
Q Consensus 213 ~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~ 291 (964)
.....+..+.+..+ ........+....+|+.+.+..+ ++......|.++.+|+.+.+..+ ++.+.. .+.++.+|+.
T Consensus 191 ~~~~~~~~~~~~~~-~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~ 267 (379)
T 4h09_A 191 PAAKTGTEFTIPST-VKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKT 267 (379)
T ss_dssp CTTCCCSEEECCTT-CCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCE
T ss_pred cccccccccccccc-eeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcc
Confidence 23333444443332 22244455667777888877655 44355667888888888888765 554444 3777888888
Q ss_pred EEccCCCCCCCCCCcccCCCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCc
Q 002121 292 VDLSNNSFDPTEAPLWFSTLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQ 371 (964)
Q Consensus 292 L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 371 (964)
+.+..+ +. ......|.++++|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.|..+
T Consensus 268 i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~- 343 (379)
T 4h09_A 268 LNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS- 343 (379)
T ss_dssp EEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-
T ss_pred cccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-
Confidence 888654 43 555667888888888888888888777788888888888888754 77777788888888888888655
Q ss_pred ceeeccCCC
Q 002121 372 ISAITLGSG 380 (964)
Q Consensus 372 l~~i~~~~~ 380 (964)
++.|....+
T Consensus 344 v~~I~~~aF 352 (379)
T 4h09_A 344 ITLIESGAF 352 (379)
T ss_dssp CCEECTTTT
T ss_pred cCEEchhHh
Confidence 666654443
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.81 E-value=2.6e-10 Score=127.22 Aligned_cols=82 Identities=15% Similarity=0.210 Sum_probs=44.4
Q ss_pred CcceeEEEccCCcCcccCCccc---CCCCCCcEEEcccCcCccc----cCccccCCCCCCeeeccCccCccCCCC-CCC-
Q 002121 215 DMVLIHVLFDGNQLSGNIPESL---GYVQTLEVLRLDRNALTGK----VPTNLNNLTNVNELNLAHNDLKGPFPD-LSQ- 285 (964)
Q Consensus 215 ~~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~- 285 (964)
+++|+.|.|.+|++.+..+..+ ..+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-. +..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 4556666665555553322222 2356777777777777643 333334567777777777776542211 111
Q ss_pred CCCCCEEEccCCC
Q 002121 286 MNSLSYVDLSNNS 298 (964)
Q Consensus 286 l~~L~~L~Ls~N~ 298 (964)
+ ...+++++|+
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 1 3456777766
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.71 E-value=7.4e-07 Score=100.38 Aligned_cols=284 Identities=12% Similarity=0.020 Sum_probs=191.6
Q ss_pred CcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhccccccccCcCCcccCCCCCccEEEcccCcccCcCCCcCCCccc
Q 002121 83 DIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILILAGCGFTGNIPDEIGNLAELSFLALNSNNFSGRIPPSLGKLSQ 162 (964)
Q Consensus 83 ~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 162 (964)
.+....+|+.+.+..+ ++..-..+|.++.+|+.+.|..+ ++..-..+|.+. +|+.+.+..+ ++.....+|.+ .+
T Consensus 41 ~~~~~~~i~~v~ip~~--vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~ 114 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG--ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TD 114 (379)
T ss_dssp TGGGGGGCSEEEECTT--EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CC
T ss_pred ccccccCCEEEEeCCC--ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CC
Confidence 4556677888888654 55555667888888888888654 664445567665 6777777544 44344445554 47
Q ss_pred cccccccccccccccCcccCCCCccccccCCCeeEccCCcccccccccccCCCcceeEEEccCCcCcc------------
Q 002121 163 LYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFHFNKNKLSGTISEQLFSPDMVLIHVLFDGNQLSG------------ 230 (964)
Q Consensus 163 L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~L~~N~l~g~l~~~~f~~~~~L~~L~l~~N~l~~------------ 230 (964)
|+.+.+..+-.. +. ...+... +|+.+.+..+ ++ .+....|.....+..+.+..+....
T Consensus 115 L~~i~lp~~~~~--i~-----~~~F~~~-~l~~~~~~~~-v~-~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 184 (379)
T 4h09_A 115 LDDFEFPGATTE--IG-----NYIFYNS-SVKRIVIPKS-VT-TIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNK 184 (379)
T ss_dssp CSEEECCTTCCE--EC-----TTTTTTC-CCCEEEECTT-CC-EECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTS
T ss_pred cccccCCCcccc--cc-----ccccccc-eeeeeeccce-ee-ccccchhcccccccccccccccceeecccceeccccc
Confidence 888887655321 22 1233332 4555555433 33 5666677777777777665544321
Q ss_pred cCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccCccCccCCC-CCCCCCCCCEEEccCCCCCCCCCCcccC
Q 002121 231 NIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAHNDLKGPFP-DLSQMNSLSYVDLSNNSFDPTEAPLWFS 309 (964)
Q Consensus 231 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 309 (964)
.....+.....+..+.+..+.-. .....+..+.+|+.+.+..+ ++.+.. .+.++..|+.+.+..+ ++ .+....|.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~ 260 (379)
T 4h09_A 185 TILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQ 260 (379)
T ss_dssp SEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTT
T ss_pred ceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccc
Confidence 11223444555666665544333 55667788889999988765 333333 4788899999999876 44 56677899
Q ss_pred CCCCCcEEECCCCccccccChhccCCCCCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCCCcc---ccee
Q 002121 310 TLPSLTTLICEFGSLQGRVPDKLFSYSQIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIK---NYTL 386 (964)
Q Consensus 310 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~---l~~l 386 (964)
++.+|+.+.+..+ ++......|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|.++ ++.|....+.. ++.+
T Consensus 261 ~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 338 (379)
T 4h09_A 261 NCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTI 338 (379)
T ss_dssp TCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCC
T ss_pred eeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEE
Confidence 9999999999654 66677788999999999999999999999999999999999999765 88887665543 4455
Q ss_pred Ee
Q 002121 387 IL 388 (964)
Q Consensus 387 ~l 388 (964)
.+
T Consensus 339 ~i 340 (379)
T 4h09_A 339 SY 340 (379)
T ss_dssp CC
T ss_pred EE
Confidence 44
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.68 E-value=2.6e-09 Score=119.07 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=16.7
Q ss_pred CCCCcEEEcccCcCccccCcccc--CCCCCCeeecc
Q 002121 239 VQTLEVLRLDRNALTGKVPTNLN--NLTNVNELNLA 272 (964)
Q Consensus 239 l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls 272 (964)
+++|+.|+|..|.++......++ .+++|++|+|+
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 45555555555555432222332 45555555553
No 414
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.65 E-value=1.3e-07 Score=102.00 Aligned_cols=140 Identities=19% Similarity=0.181 Sum_probs=94.8
Q ss_pred ccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCC---CccceeEEEEeeCceEEEEEeccC
Q 002121 631 ESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHK---NLVGLVGFCFEQGEQMLVYEFMAN 707 (964)
Q Consensus 631 ~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~lV~E~~~~ 707 (964)
..+.||.|.++.||++...+|+.++||+...........|..|++.|+.++|. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35789999999999999888999999997544333346789999999999875 467777753 47999999999
Q ss_pred CChhh-----------hhcCCCCC-------------------ccchHHHHH--------------------HHHHHHHH
Q 002121 708 GTLRE-----------SLSGRSGI-------------------HLDWKRRLR--------------------IALGSARG 737 (964)
Q Consensus 708 gsL~~-----------~l~~~~~~-------------------~l~~~~~~~--------------------i~~~ia~g 737 (964)
+.+.. .+|..... .-+|.+... ....+-+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 87531 12322110 013432210 01111222
Q ss_pred HHHHh----hcCCCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 738 LAYLH----ELANPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 738 L~yLH----~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
++.+. ....+.++|+|+.+.||+++. +.+.|+|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 33332 223567999999999999988 45889999 654
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.64 E-value=2.8e-10 Score=120.48 Aligned_cols=147 Identities=16% Similarity=0.165 Sum_probs=92.3
Q ss_pred CCCCCccEEecCC--CeeEEEcCC---CCccccccC-CcCCCCcccEEecccCCCCCCCCC-CCCCCcccchh--hcccc
Q 002121 52 PCGSWEGVTCNNS--RVTALGLST---MGLTGKLSG-DIGGLTELRSLDLSYNGGLTGSLS-PRIGDLQKLNI--LILAG 122 (964)
Q Consensus 52 ~C~~w~gv~C~~~--~v~~L~L~~---~~l~g~~~~-~l~~l~~L~~L~L~~N~~l~~~~p-~~l~~l~~L~~--L~L~~ 122 (964)
.| +|.|+.|... +|+.+...+ ..+.+.+.+ .+..++. .|...+| ...+.+. ..|...+.|+. ++++.
T Consensus 77 l~-~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn-~~~~~LdLs~l~~dp~L~~~~l~l~~ 152 (267)
T 3rw6_A 77 LK-AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYD-GSQQALDLKGLRSDPDLVAQNIDVVL 152 (267)
T ss_dssp HH-HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEE-TTTTEEECTTGGGCHHHHHTTCCCCT
T ss_pred HH-hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccc-hhccccCHHHcCCCcchhhcCccccC
Confidence 35 7999999754 777766655 334444432 2223332 3445555 3333333 23666677777 77788
Q ss_pred cccc---CcCCcccCCCCCccEEEcccCcccC--cCCCcCCCccccccccccccccccccCcccCCCCccccccCCCeeE
Q 002121 123 CGFT---GNIPDEIGNLAELSFLALNSNNFSG--RIPPSLGKLSQLYWLDLADNQLTGSIPVSTITSPGLDQLKNAKHFH 197 (964)
Q Consensus 123 n~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~~l~~l~~L~~L~ 197 (964)
|... +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. . ....+..+ +|++|+
T Consensus 153 N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~----~l~~l~~l-~L~~L~ 226 (267)
T 3rw6_A 153 NRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-R----ELDKIKGL-KLEELW 226 (267)
T ss_dssp TSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-G----GGGGGTTS-CCSEEE
T ss_pred CHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-h----hhhhcccC-CcceEE
Confidence 8543 2223233568899999999999997 4566777899999999999999842 1 01222333 777777
Q ss_pred ccCCccccccc
Q 002121 198 FNKNKLSGTIS 208 (964)
Q Consensus 198 L~~N~l~g~l~ 208 (964)
|++|.+.+.+|
T Consensus 227 L~~Npl~~~~~ 237 (267)
T 3rw6_A 227 LDGNSLCDTFR 237 (267)
T ss_dssp CTTSTTGGGCS
T ss_pred ccCCcCccccC
Confidence 77777765544
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.64 E-value=2e-07 Score=102.40 Aligned_cols=137 Identities=18% Similarity=0.251 Sum_probs=103.1
Q ss_pred CCCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCC--C--CccceeEEEEeeCceEEEEE
Q 002121 628 NFSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHH--K--NLVGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 628 ~~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~--nIv~l~~~~~~~~~~~lV~E 703 (964)
.+...+.++.|....||+. |+.+++|+.... .....+.+|.++++.+.+ . .+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5667788999999999997 677889976432 223468899999999976 1 23445544 67799999
Q ss_pred eccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCC-------------------------------------
Q 002121 704 FMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELAN------------------------------------- 746 (964)
Q Consensus 704 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~------------------------------------- 746 (964)
|++|.++...... .++..++..++.++++.|+.||+...
T Consensus 108 ~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 108 YIKGERITYEQYH----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCCCBCCCHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ecCCccccccccc----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 9999888643321 25666777888888888888885432
Q ss_pred -----------------------CCeeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 747 -----------------------PPIIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 747 -----------------------~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
+.++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999999766799999998754
No 417
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.43 E-value=1.6e-06 Score=94.51 Aligned_cols=136 Identities=21% Similarity=0.224 Sum_probs=95.4
Q ss_pred cceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCC---CccceeEEEE-eeCceEEEEEeccC
Q 002121 632 SNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHK---NLVGLVGFCF-EQGEQMLVYEFMAN 707 (964)
Q Consensus 632 ~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~-~~~~~~lV~E~~~~ 707 (964)
.+.++.|....||+. |..++||+... ......+.+|+++|+.+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 356888999999987 56788888532 22345789999999999753 2556666664 34567899999999
Q ss_pred CChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhc-------------------------------------------
Q 002121 708 GTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHEL------------------------------------------- 744 (964)
Q Consensus 708 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------------- 744 (964)
..+.+.... .++..++..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 888763211 134445555556666666655542
Q ss_pred --------------CCCCeeccCCCCCcEEECC---CCc-EEEeeccccee
Q 002121 745 --------------ANPPIIHRDVKSTNILLDE---NLT-AKVADFGLSKL 777 (964)
Q Consensus 745 --------------~~~~ivH~Dlk~~NILl~~---~~~-~kl~DFGla~~ 777 (964)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2234699999999999987 455 48999998764
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.40 E-value=1.6e-06 Score=92.51 Aligned_cols=136 Identities=18% Similarity=0.163 Sum_probs=98.7
Q ss_pred ceeecCCcE-EEEEEEec-CCcEEEEEEecCCCcchhHHHHHHHHHHHhcC-CCCccceeEEEEeeCceEEEEEeccCCC
Q 002121 633 NEIGSGGYG-KVYRGMLS-DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVH-HKNLVGLVGFCFEQGEQMLVYEFMANGT 709 (964)
Q Consensus 633 ~~lG~G~fg-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~E~~~~gs 709 (964)
+.+..|..| .||+.... ++..++||+.... ....+.+|.++|+.+. +--+.++++++.+.+..++|||++++.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345556665 69988754 4678999986532 3346889999999885 3336688999998899999999999988
Q ss_pred hhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcC--------------------------------------------
Q 002121 710 LRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELA-------------------------------------------- 745 (964)
Q Consensus 710 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------------- 745 (964)
+.+.... .......++.++++.|+-||+..
T Consensus 107 ~~~~~~~------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 107 AFQVLEE------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHH------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred ccccccC------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 8765432 12233456666677777777421
Q ss_pred -----------CCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 746 -----------NPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 746 -----------~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
.+.++|+|+.+.|||+++++.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999887778999998764
No 419
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.33 E-value=2.8e-06 Score=94.88 Aligned_cols=143 Identities=11% Similarity=0.152 Sum_probs=92.2
Q ss_pred CCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCC--ccceeEEEEee-CceEEEEEec
Q 002121 629 FSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKN--LVGLVGFCFEQ-GEQMLVYEFM 705 (964)
Q Consensus 629 ~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~-~~~~lV~E~~ 705 (964)
....+.++.|....+|+... +|+.+++|+.... ..+..|+.+++.+.... +.++++++... +..++||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 34457789999999999886 5788999987532 25889999999987544 45677776654 5689999999
Q ss_pred cCCChhhh------------------hcCCC--C-Cc------------cchHHHH---------------------HHH
Q 002121 706 ANGTLRES------------------LSGRS--G-IH------------LDWKRRL---------------------RIA 731 (964)
Q Consensus 706 ~~gsL~~~------------------l~~~~--~-~~------------l~~~~~~---------------------~i~ 731 (964)
+|.++.+. ||... . .. -+|.+.+ ...
T Consensus 117 ~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 196 (362)
T 3ovc_A 117 QGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVA 196 (362)
T ss_dssp CSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence 98665421 11110 0 00 0111110 111
Q ss_pred HHHHHHHHHHhhc-CCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 732 LGSARGLAYLHEL-ANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 732 ~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
..+...++++... ..+.++|+|+++.||++++++.+.|+||+.+..
T Consensus 197 ~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 197 QALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 1122222233211 125589999999999998877789999998864
No 420
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.31 E-value=1.5e-06 Score=97.02 Aligned_cols=80 Identities=8% Similarity=0.048 Sum_probs=57.3
Q ss_pred cee-ecCCcEEEEEEEec-------CCcEEEEEEecCCC---cchhHHHHHHHHHHHhcC-C--CCccceeEEEEee---
Q 002121 633 NEI-GSGGYGKVYRGMLS-------DGQVVAIKRAQQGS---MQGGLEFKTEIELLSRVH-H--KNLVGLVGFCFEQ--- 695 (964)
Q Consensus 633 ~~l-G~G~fg~Vy~~~~~-------~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~--- 695 (964)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+++++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 78888999998764 26788999865432 111246789999999885 3 3466788887654
Q ss_pred CceEEEEEeccCCChhh
Q 002121 696 GEQMLVYEFMANGTLRE 712 (964)
Q Consensus 696 ~~~~lV~E~~~~gsL~~ 712 (964)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999876653
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.22 E-value=1.3e-07 Score=95.09 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=31.4
Q ss_pred ccCCCCCCcEEEcccC-cCcc----ccCccccCCCCCCeeeccCccCccCCC-----CCCCCCCCCEEEccCCCCC
Q 002121 235 SLGYVQTLEVLRLDRN-ALTG----KVPTNLNNLTNVNELNLAHNDLKGPFP-----DLSQMNSLSYVDLSNNSFD 300 (964)
Q Consensus 235 ~~~~l~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~-----~l~~l~~L~~L~Ls~N~l~ 300 (964)
.+...++|+.|+|++| .|.. .+...+...++|++|+|++|.|..... .+...++|++|+|++|.|+
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 3444555666666665 5542 233344445555555555555543111 1233344555555555553
No 422
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.20 E-value=6e-08 Score=102.61 Aligned_cols=43 Identities=28% Similarity=0.361 Sum_probs=27.4
Q ss_pred CCCCCCcEEEcccCcCcc--ccCccccCCCCCCeeeccCccCccC
Q 002121 237 GYVQTLEVLRLDRNALTG--KVPTNLNNLTNVNELNLAHNDLKGP 279 (964)
Q Consensus 237 ~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~ 279 (964)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~ 211 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 211 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc
Confidence 345667777777777765 3445556666666666666666654
No 423
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.19 E-value=1e-07 Score=95.73 Aligned_cols=120 Identities=13% Similarity=0.153 Sum_probs=91.9
Q ss_pred ccCccccCCCCCCeeeccCc-cCccCC-----CCCCCCCCCCEEEccCCCCCCC---CCCcccCCCCCCcEEECCCCccc
Q 002121 255 KVPTNLNNLTNVNELNLAHN-DLKGPF-----PDLSQMNSLSYVDLSNNSFDPT---EAPLWFSTLPSLTTLICEFGSLQ 325 (964)
Q Consensus 255 ~~p~~~~~l~~L~~L~Ls~N-~l~~~~-----~~l~~l~~L~~L~Ls~N~l~~~---~~~~~~~~l~~L~~L~Ls~N~l~ 325 (964)
.+...+...+.|++|+|++| .|.... ..+...++|++|+|++|.|+.. .+...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 45566778899999999999 887532 2367788999999999999621 12334556688999999999998
Q ss_pred cc----cChhccCCCCCCEEEc--CCcccccccC----CCCccCCCCcEEeccCCccee
Q 002121 326 GR----VPDKLFSYSQIQQVKL--RNNAFNNTLD----MGNAVGPLLQLVDLQNNQISA 374 (964)
Q Consensus 326 ~~----~p~~~~~l~~L~~L~L--~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~ 374 (964)
.. +...+...+.|++|+| ++|.|..... ..+...+.|+.|+|++|.+..
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCCh
Confidence 65 4566777889999999 8899986533 344455889999999998864
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.01 E-value=2.5e-05 Score=88.44 Aligned_cols=75 Identities=20% Similarity=0.131 Sum_probs=50.6
Q ss_pred cceeecCCcEEEEEEEec-CCcEEEEEEecCCCc-------chhHHHHHHHHHHHhcCC--CCcc-ceeEEEEeeCceEE
Q 002121 632 SNEIGSGGYGKVYRGMLS-DGQVVAIKRAQQGSM-------QGGLEFKTEIELLSRVHH--KNLV-GLVGFCFEQGEQML 700 (964)
Q Consensus 632 ~~~lG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~nIv-~l~~~~~~~~~~~l 700 (964)
.+.||.|.++.||++... +++.++||....... ....++..|+++++.+.+ +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999754 468899998653211 123457889999988843 3444 45543 4456789
Q ss_pred EEEeccCC
Q 002121 701 VYEFMANG 708 (964)
Q Consensus 701 V~E~~~~g 708 (964)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.98 E-value=2.3e-05 Score=86.60 Aligned_cols=139 Identities=17% Similarity=0.213 Sum_probs=81.8
Q ss_pred ceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCC--CCccceeE------EEEeeCceEEEEEe
Q 002121 633 NEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHH--KNLVGLVG------FCFEQGEQMLVYEF 704 (964)
Q Consensus 633 ~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~------~~~~~~~~~lV~E~ 704 (964)
+.|+.|..+.||+....+| .+++|+.... ..++..|+++++.+.. -.+.+++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677899999988655 4899988752 2344556666666631 12333432 12345667999999
Q ss_pred ccCCChh--------------hhhcCC--C---C-------CccchHHHH------------------------------
Q 002121 705 MANGTLR--------------ESLSGR--S---G-------IHLDWKRRL------------------------------ 728 (964)
Q Consensus 705 ~~~gsL~--------------~~l~~~--~---~-------~~l~~~~~~------------------------------ 728 (964)
++|..+. ..+|.. . . ..-.|....
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 111210 0 0 001232210
Q ss_pred -HHHHHHHHHHHHHhh----------cCCCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 729 -RIALGSARGLAYLHE----------LANPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 729 -~i~~~ia~gL~yLH~----------~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
.+...+..++++|+. .....++|||+++.|||++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223446677763 124569999999999999888899999999775
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.90 E-value=5.1e-05 Score=82.45 Aligned_cols=137 Identities=18% Similarity=0.199 Sum_probs=92.7
Q ss_pred cceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcC---CCCccceeEEEEeeCceEEEEEeccCC
Q 002121 632 SNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVH---HKNLVGLVGFCFEQGEQMLVYEFMANG 708 (964)
Q Consensus 632 ~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lV~E~~~~g 708 (964)
.+.|+.|....+|+... ++..++||+.... ....+..|++.|+.+. ...+.++++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 46789999999999886 4678889987642 2456889999999884 356788999888778899999999987
Q ss_pred Chhh-----------hhcCCCC-C-------------------ccchHHHH-----HHHHH--------------HH-HH
Q 002121 709 TLRE-----------SLSGRSG-I-------------------HLDWKRRL-----RIALG--------------SA-RG 737 (964)
Q Consensus 709 sL~~-----------~l~~~~~-~-------------------~l~~~~~~-----~i~~~--------------ia-~g 737 (964)
.+.. .||.... . .-+|.+.. .-..+ +. ..
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 2232211 0 11454322 11111 11 11
Q ss_pred HHHHhh-cCCCCeeccCCCCCcEEECCCCcEEEeecc
Q 002121 738 LAYLHE-LANPPIIHRDVKSTNILLDENLTAKVADFG 773 (964)
Q Consensus 738 L~yLH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~DFG 773 (964)
...|.. ...+.++|+|+.+.|++++.++ +.|.||+
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223321 2356799999999999999887 8899974
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.87 E-value=4.7e-05 Score=82.02 Aligned_cols=78 Identities=18% Similarity=0.218 Sum_probs=58.0
Q ss_pred CCccceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCC---CccceeEEEEeeCceEEEEEec
Q 002121 629 FSESNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHK---NLVGLVGFCFEQGEQMLVYEFM 705 (964)
Q Consensus 629 ~~~~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~lV~E~~ 705 (964)
....+.+|.|..+.||+.+..+|+.|+||+...........|..|++.|+.+.-. -+.+++++ +..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEee
Confidence 3445789999999999999999999999987655444445688999999988522 23444443 3457999999
Q ss_pred cCCCh
Q 002121 706 ANGTL 710 (964)
Q Consensus 706 ~~gsL 710 (964)
+++..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87653
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.85 E-value=2.1e-05 Score=73.68 Aligned_cols=72 Identities=17% Similarity=0.127 Sum_probs=44.6
Q ss_pred CCCEEEcCCcccccccCCCCccCCCCcEEeccCCcceeeccCCCcccceeEeecCC-cccccccccCccccCCCCCcccc
Q 002121 337 QIQQVKLRNNAFNNTLDMGNAVGPLLQLVDLQNNQISAITLGSGIKNYTLILVGNP-VCTATLANTNYCQLQQPTTKAYS 415 (964)
Q Consensus 337 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~l~l~~Np-~c~~~l~~~~~~~~~~~~~~~~~ 415 (964)
+|+.|+|++|+|+.+.+..|..+++|+ .|+|.+|| .|||.+.++..|........ .
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~---------------------~L~L~~NP~~CdC~l~~l~~wl~~~~~~~--~ 88 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALR---------------------TAHLGANPWRCDCRLVPLRAWLAGRPERA--P 88 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCC---------------------EEECCSSCCBCSGGGHHHHHHHHTSSCSG--G
T ss_pred CCCEEECCCCcCCccChhhhhhccccC---------------------EEEecCCCeeccCccHHHHHHHHhCcccc--c
Confidence 345555555555554444444444444 45566777 79999999999965443322 1
Q ss_pred cccccCCCCCCCCCCC
Q 002121 416 TSLANCGGKSCPPEQK 431 (964)
Q Consensus 416 ~~~~~c~~~~~~~~~~ 431 (964)
.....|.+|+-..++.
T Consensus 89 ~~~~~C~~P~~l~g~~ 104 (130)
T 3rfe_A 89 YRDLRCVAPPALRGRL 104 (130)
T ss_dssp GTTCBCCBSTTTTTCB
T ss_pred ccCcEeCcChHHcCCC
Confidence 3567899988777763
No 429
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.64 E-value=0.00035 Score=76.26 Aligned_cols=159 Identities=14% Similarity=0.093 Sum_probs=93.8
Q ss_pred cccHHHHHHhhcCCCc-----cceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCc--cce
Q 002121 616 WFSYDELKKCSNNFSE-----SNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNL--VGL 688 (964)
Q Consensus 616 ~~~~~el~~~~~~~~~-----~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI--v~l 688 (964)
.++.+++......|.. .+.|+.|....+|+....+| .+++|+..... ...++..|++++..+....+ .++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 3667777777777765 24566788899999988666 68899887531 22356778888888753222 333
Q ss_pred eEE------EEeeCceEEEEEeccCCChhh--------------hhcCC----CCC------ccchHHHHHH--------
Q 002121 689 VGF------CFEQGEQMLVYEFMANGTLRE--------------SLSGR----SGI------HLDWKRRLRI-------- 730 (964)
Q Consensus 689 ~~~------~~~~~~~~lV~E~~~~gsL~~--------------~l~~~----~~~------~l~~~~~~~i-------- 730 (964)
+.. ....+..++||||++|..+.. .+|.. ... ...|.....-
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 122356789999999865421 11211 000 1134331111
Q ss_pred ----HHHHHHHHHHHhhc----CCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 731 ----ALGSARGLAYLHEL----ANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 731 ----~~~ia~gL~yLH~~----~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
...+.+.++++++. ....++|+|+.+.|||++++..+.|+||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 11234456666532 234589999999999999876668999987753
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.61 E-value=0.00019 Score=81.78 Aligned_cols=77 Identities=14% Similarity=0.133 Sum_probs=48.2
Q ss_pred CCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCCceeecccc--cCcccCccccccC---CCCCchhHHHHHHHH
Q 002121 746 NPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGHVSTQVKG--TMGYLDPEYYMTQ---QLTEKSDVYSFGVVM 820 (964)
Q Consensus 746 ~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~sDv~S~Gvvl 820 (964)
.+.++|||+++.|||++.++ ++|+||+.+..-+..-. ...... ...|++|+..... ......++......+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D---la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD---IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT 306 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH---HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH---HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence 45599999999999999876 99999999875432100 000011 1346666655321 112345566778888
Q ss_pred HHHHhC
Q 002121 821 LELITA 826 (964)
Q Consensus 821 ~elltg 826 (964)
|+.+++
T Consensus 307 ~~~y~~ 312 (420)
T 2pyw_A 307 WNLFNK 312 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887765
No 431
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.36 E-value=0.0021 Score=70.16 Aligned_cols=157 Identities=11% Similarity=0.091 Sum_probs=91.7
Q ss_pred ccHHHHHHhhcCCCc-----cceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCC--cccee
Q 002121 617 FSYDELKKCSNNFSE-----SNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKN--LVGLV 689 (964)
Q Consensus 617 ~~~~el~~~~~~~~~-----~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~ 689 (964)
++.+++..+...|.. ...++ |....||+....+|+.+++|+...... ....+..|..+++.+.... +.+++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeeccee
Confidence 555666655544432 34566 888899998887788899999864322 2346778888888885322 34444
Q ss_pred EE-----EEeeCceEEEEEeccCCChhh--------------hhcC----CC---CCccchHHH----HHHH--------
Q 002121 690 GF-----CFEQGEQMLVYEFMANGTLRE--------------SLSG----RS---GIHLDWKRR----LRIA-------- 731 (964)
Q Consensus 690 ~~-----~~~~~~~~lV~E~~~~gsL~~--------------~l~~----~~---~~~l~~~~~----~~i~-------- 731 (964)
.. ....+..++||||++|..+.. .+|. .. ....++... ..+.
T Consensus 89 ~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (328)
T 1zyl_A 89 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS 168 (328)
T ss_dssp CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred ecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCH
Confidence 43 122445678999998754321 0111 00 011222211 0011
Q ss_pred -------HHHHHHHHHHhhc----CCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 732 -------LGSARGLAYLHEL----ANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 732 -------~~ia~gL~yLH~~----~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
..+.+.++.+.+. ....++|||+++.|||++ + .+.|+||+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 169 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1111223333221 234578999999999999 4 899999988754
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.35 E-value=0.001 Score=71.86 Aligned_cols=138 Identities=14% Similarity=0.143 Sum_probs=77.9
Q ss_pred cceeecCCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCcc-ceeEEEEeeCceEEEEEec-cCCC
Q 002121 632 SNEIGSGGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLV-GLVGFCFEQGEQMLVYEFM-ANGT 709 (964)
Q Consensus 632 ~~~lG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv-~l~~~~~~~~~~~lV~E~~-~~gs 709 (964)
.+.|+.|....+|+. +.+++|+....... .....+|+.+++.+....+. +++++ +.+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 577999999999998 56888987653211 12346788888888544444 55543 344568999999 5544
Q ss_pred hhh------------------hhcCCCC---Cccc-hHHHHHHHHH--------------HHHHH----HHHhh-cCCCC
Q 002121 710 LRE------------------SLSGRSG---IHLD-WKRRLRIALG--------------SARGL----AYLHE-LANPP 748 (964)
Q Consensus 710 L~~------------------~l~~~~~---~~l~-~~~~~~i~~~--------------ia~gL----~yLH~-~~~~~ 748 (964)
+.. .+|.... ...+ +.+...+... +.+.+ +.+.. .....
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 421 1122110 0001 1111111000 11111 11111 12344
Q ss_pred eeccCCCCCcEEECCCCcEEEeecccceee
Q 002121 749 IIHRDVKSTNILLDENLTAKVADFGLSKLV 778 (964)
Q Consensus 749 ivH~Dlk~~NILl~~~~~~kl~DFGla~~~ 778 (964)
++|+|+.+.||+ ..++.+.++||..+..-
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 799999999999 56678899999987653
No 433
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.35 E-value=5.9e-05 Score=73.94 Aligned_cols=81 Identities=6% Similarity=-0.004 Sum_probs=40.7
Q ss_pred CCEEEccCCCCCCCCCCcccCCCCCCcEEECCCCc-cccccChhccCC----CCCCEEEcCCcc-cccccCCCCccCCCC
Q 002121 289 LSYVDLSNNSFDPTEAPLWFSTLPSLTTLICEFGS-LQGRVPDKLFSY----SQIQQVKLRNNA-FNNTLDMGNAVGPLL 362 (964)
Q Consensus 289 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~~L 362 (964)
|+.|||+++.++ ...-..+.++++|+.|+|++|. |+..--..+..+ ++|+.|+|++|. +++..-..+..+++|
T Consensus 63 L~~LDLs~~~It-d~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 63 IQAIDATDSCIM-SIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp EEEEEEESCCCC-GGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred EeEEeCcCCCcc-HHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 444444444443 2222234455555555555553 444444444443 246666666653 555444445556666
Q ss_pred cEEeccCC
Q 002121 363 QLVDLQNN 370 (964)
Q Consensus 363 ~~L~L~~N 370 (964)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666665
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.30 E-value=3.3e-05 Score=75.78 Aligned_cols=83 Identities=14% Similarity=0.215 Sum_probs=40.9
Q ss_pred CeeEEEcCCCCccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCc----ccchhhcccccc-ccCcCCcccCCCCCc
Q 002121 65 RVTALGLSTMGLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDL----QKLNILILAGCG-FTGNIPDEIGNLAEL 139 (964)
Q Consensus 65 ~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l----~~L~~L~L~~n~-l~~~~p~~~~~l~~L 139 (964)
+++.|||+++.++..--..+..+++|++|+|+++..++..--..++.+ ++|++|+|++|. |+..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 566677766666554444456666666666666643443332233332 235555555542 443222233444444
Q ss_pred cEEEcccC
Q 002121 140 SFLALNSN 147 (964)
Q Consensus 140 ~~L~Ls~N 147 (964)
++|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 44444443
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.28 E-value=0.00074 Score=74.14 Aligned_cols=141 Identities=13% Similarity=0.093 Sum_probs=75.0
Q ss_pred ceeecCCcEE-EEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCC--ccceeEEEEeeCceEEEEEeccCCC
Q 002121 633 NEIGSGGYGK-VYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKN--LVGLVGFCFEQGEQMLVYEFMANGT 709 (964)
Q Consensus 633 ~~lG~G~fg~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~lV~E~~~~gs 709 (964)
+.|+.|+... +|+....+|+.+++|....... ..+..|+++++.+.... +.+++.+..+ .-++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~--~g~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHA--RGLLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETT--TTEEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCC--CCEEEEeeCCCcc
Confidence 4565565554 6677664467788876543221 34567788888775323 4566665332 2378999997766
Q ss_pred hhhhhcC---------------------CCC---CccchHHHH-------H-------------HHHHHHHHHHHHh---
Q 002121 710 LRESLSG---------------------RSG---IHLDWKRRL-------R-------------IALGSARGLAYLH--- 742 (964)
Q Consensus 710 L~~~l~~---------------------~~~---~~l~~~~~~-------~-------------i~~~ia~gL~yLH--- 742 (964)
+.+++.. ... ..++..... . ....+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 6543321 110 011110000 0 0011112222221
Q ss_pred hcCCCCeeccCCCCCcEEECCC----CcEEEeecccceee
Q 002121 743 ELANPPIIHRDVKSTNILLDEN----LTAKVADFGLSKLV 778 (964)
Q Consensus 743 ~~~~~~ivH~Dlk~~NILl~~~----~~~kl~DFGla~~~ 778 (964)
....+.++|||+.+.|||++.+ +.+.|+||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1123568999999999999875 68999999988753
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.21 E-value=0.00082 Score=76.53 Aligned_cols=73 Identities=15% Similarity=0.156 Sum_probs=51.1
Q ss_pred cceeecCCcEEEEEEEecC--------CcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCc-cceeEEEEeeCceEEEE
Q 002121 632 SNEIGSGGYGKVYRGMLSD--------GQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNL-VGLVGFCFEQGEQMLVY 702 (964)
Q Consensus 632 ~~~lG~G~fg~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~ 702 (964)
.+.|+.|....||+....+ ++.+++|+..... ....+.+|..+++.+...++ .++++.+.+ .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3568888889999998753 5789999985421 11456689999998864444 566665532 3899
Q ss_pred EeccCCCh
Q 002121 703 EFMANGTL 710 (964)
Q Consensus 703 E~~~~gsL 710 (964)
||++|.+|
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986444
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.99 E-value=0.0027 Score=70.68 Aligned_cols=140 Identities=17% Similarity=0.181 Sum_probs=83.8
Q ss_pred ceeecCCcEEEEEEEec--------CCcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCc-cceeEEEEeeCceEEEEE
Q 002121 633 NEIGSGGYGKVYRGMLS--------DGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNL-VGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 633 ~~lG~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~E 703 (964)
+.+..|-...+|+.... +++.+++|+.... ......+.+|.++++.+.-..+ .++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45666777889998875 2578999986432 2234567789999998853333 466666543 39999
Q ss_pred eccCCChhh-----------------hhcCCC---CCcc--chHHHHHHHHHHHH-------------------HHHHHh
Q 002121 704 FMANGTLRE-----------------SLSGRS---GIHL--DWKRRLRIALGSAR-------------------GLAYLH 742 (964)
Q Consensus 704 ~~~~gsL~~-----------------~l~~~~---~~~l--~~~~~~~i~~~ia~-------------------gL~yLH 742 (964)
|++|..|.. .||... +... -|.++.++..++.. .++.|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 999765531 112211 1112 24455555443321 233332
Q ss_pred ----hc-CCCCeeccCCCCCcEEECCC----CcEEEeeccccee
Q 002121 743 ----EL-ANPPIIHRDVKSTNILLDEN----LTAKVADFGLSKL 777 (964)
Q Consensus 743 ----~~-~~~~ivH~Dlk~~NILl~~~----~~~kl~DFGla~~ 777 (964)
.. ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 23457899999999999876 7899999998764
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.96 E-value=0.00013 Score=72.88 Aligned_cols=18 Identities=17% Similarity=0.350 Sum_probs=8.0
Q ss_pred ccCCCCCCeeeccCccCc
Q 002121 260 LNNLTNVNELNLAHNDLK 277 (964)
Q Consensus 260 ~~~l~~L~~L~Ls~N~l~ 277 (964)
+..-+.|+.|+|++|.|.
T Consensus 66 L~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp HTTCSCCCEEECTTSCCB
T ss_pred HhhCCCcCEEEccCCCCC
Confidence 333444444444444443
No 439
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.95 E-value=0.0019 Score=71.95 Aligned_cols=73 Identities=14% Similarity=0.124 Sum_probs=46.0
Q ss_pred ceeecCCcEEEEEEEecC---------CcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCcc-ceeEEEEeeCceEEEE
Q 002121 633 NEIGSGGYGKVYRGMLSD---------GQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLV-GLVGFCFEQGEQMLVY 702 (964)
Q Consensus 633 ~~lG~G~fg~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv-~l~~~~~~~~~~~lV~ 702 (964)
+.++.|....+|+....+ ++.+++|+..... ........|.++++.+...+++ ++++.. .-++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec----CCcEEE
Confidence 567778888999998754 2688999875432 1112346888999888644443 666543 237899
Q ss_pred EeccCCCh
Q 002121 703 EFMANGTL 710 (964)
Q Consensus 703 E~~~~gsL 710 (964)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987544
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.88 E-value=0.0046 Score=70.75 Aligned_cols=74 Identities=15% Similarity=0.039 Sum_probs=49.4
Q ss_pred cceeecCCcEEEEEEEecC-CcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCc-cceeEEEEeeCceEEEEEeccCCC
Q 002121 632 SNEIGSGGYGKVYRGMLSD-GQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNL-VGLVGFCFEQGEQMLVYEFMANGT 709 (964)
Q Consensus 632 ~~~lG~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~E~~~~gs 709 (964)
.+.|+.|-...+|+....+ +..+++|+..... .......+|..+++.+...++ .++++++. + .+||||+++.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 3568888889999999865 5788999875432 111223689999999975555 46676662 2 35999998755
Q ss_pred h
Q 002121 710 L 710 (964)
Q Consensus 710 L 710 (964)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.81 E-value=0.00021 Score=71.30 Aligned_cols=116 Identities=16% Similarity=0.149 Sum_probs=75.3
Q ss_pred ccccCCCCCCeeeccCc-cCccC-----CCCCCCCCCCCEEEccCCCCC---CCCCCcccCCCCCCcEEECCCCccccc-
Q 002121 258 TNLNNLTNVNELNLAHN-DLKGP-----FPDLSQMNSLSYVDLSNNSFD---PTEAPLWFSTLPSLTTLICEFGSLQGR- 327 (964)
Q Consensus 258 ~~~~~l~~L~~L~Ls~N-~l~~~-----~~~l~~l~~L~~L~Ls~N~l~---~~~~~~~~~~l~~L~~L~Ls~N~l~~~- 327 (964)
..+.+-+.|++|+|++| .|... ...+...+.|+.|+|++|.|. ...+...+..-+.|+.|+|+.|.|...
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34455567777777774 66432 123667788999999999996 222233344567899999999998865
Q ss_pred ---cChhccCCCCCCEEEcCCcc---cccc----cCCCCccCCCCcEEeccCCcce
Q 002121 328 ---VPDKLFSYSQIQQVKLRNNA---FNNT----LDMGNAVGPLLQLVDLQNNQIS 373 (964)
Q Consensus 328 ---~p~~~~~l~~L~~L~L~~N~---l~~~----~~~~~~~l~~L~~L~L~~N~l~ 373 (964)
+.+.+..-+.|+.|+|++|. +... +...+..-+.|+.|+|+.|.+.
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 33455666778889988653 3322 2233445567888888776543
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.67 E-value=0.0066 Score=66.71 Aligned_cols=66 Identities=11% Similarity=0.067 Sum_probs=43.8
Q ss_pred CCcEEEEEEEecCCcEEEEEEecCCCcchhHHHHHHHHHHHhcCC---CCccceeEE------EEeeCceEEEEEeccCC
Q 002121 638 GGYGKVYRGMLSDGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHH---KNLVGLVGF------CFEQGEQMLVYEFMANG 708 (964)
Q Consensus 638 G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H---~nIv~l~~~------~~~~~~~~lV~E~~~~g 708 (964)
|....||+....+| .+++|+...... ..|+++++.+.. |.+.+++.. ....+..++||||++|.
T Consensus 34 g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~ 106 (339)
T 3i1a_A 34 DTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAP 106 (339)
T ss_dssp CSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCC
T ss_pred ccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCC
Confidence 33679999998777 899998765432 356666666632 224455432 23346779999999987
Q ss_pred Ch
Q 002121 709 TL 710 (964)
Q Consensus 709 sL 710 (964)
.+
T Consensus 107 ~~ 108 (339)
T 3i1a_A 107 NG 108 (339)
T ss_dssp BT
T ss_pred cC
Confidence 65
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.22 E-value=0.025 Score=63.23 Aligned_cols=141 Identities=16% Similarity=0.114 Sum_probs=83.0
Q ss_pred ceeecCCcEEEEEEEecC--------CcEEEEEEecCCCcc-----------hh-------HHHHHHHHHHHhcCCCC-c
Q 002121 633 NEIGSGGYGKVYRGMLSD--------GQVVAIKRAQQGSMQ-----------GG-------LEFKTEIELLSRVHHKN-L 685 (964)
Q Consensus 633 ~~lG~G~fg~Vy~~~~~~--------g~~vavK~~~~~~~~-----------~~-------~~~~~E~~~l~~l~H~n-I 685 (964)
+.|..|-...+|+...++ ++.|.+++.-..... .+ +....|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667778999998754 368888887543211 11 12335889998886444 4
Q ss_pred cceeEEEEeeCceEEEEEeccCCChhh--h---------------hcCCC---CCcc--chHHHHHHHHHHH--------
Q 002121 686 VGLVGFCFEQGEQMLVYEFMANGTLRE--S---------------LSGRS---GIHL--DWKRRLRIALGSA-------- 735 (964)
Q Consensus 686 v~l~~~~~~~~~~~lV~E~~~~gsL~~--~---------------l~~~~---~~~l--~~~~~~~i~~~ia-------- 735 (964)
.++++++.. .+|+||+++-+|.. + +|... .... -|.+..++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 467776642 28999998655421 1 12211 1112 2334443433221
Q ss_pred --------------HHH----HHHhhcC-CCCeeccCCCCCcEEECCC------CcEEEeeccccee
Q 002121 736 --------------RGL----AYLHELA-NPPIIHRDVKSTNILLDEN------LTAKVADFGLSKL 777 (964)
Q Consensus 736 --------------~gL----~yLH~~~-~~~ivH~Dlk~~NILl~~~------~~~kl~DFGla~~ 777 (964)
.-+ ++|...+ ...++|+|+.+.||+++++ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 2233222 2347899999999999877 7899999988753
No 444
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.21 E-value=0.006 Score=56.74 Aligned_cols=36 Identities=28% Similarity=0.416 Sum_probs=20.0
Q ss_pred CCCeeeccCccCccCCCC-CCCCCCCCEEEccCCCCC
Q 002121 265 NVNELNLAHNDLKGPFPD-LSQMNSLSYVDLSNNSFD 300 (964)
Q Consensus 265 ~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~ 300 (964)
+|++|+|++|+|+.+++. |..+++|+.|+|++|++.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 355555555555554443 455556666666666664
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.82 E-value=0.078 Score=53.14 Aligned_cols=103 Identities=14% Similarity=0.099 Sum_probs=66.9
Q ss_pred CChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccceeecCCCCCcee
Q 002121 708 GTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSSKGHVS 787 (964)
Q Consensus 708 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 787 (964)
-+|.+.|...+ .++++++++.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.+.+.+ +.+.
T Consensus 33 vSL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc-----------
Confidence 37889887654 6899999999999999988766211111 1233456899999999988764 1111
Q ss_pred ecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCC
Q 002121 788 TQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQP 829 (964)
Q Consensus 788 ~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p 829 (964)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0123467888763 3456788999999999998874444
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.19 E-value=0.11 Score=58.58 Aligned_cols=139 Identities=15% Similarity=0.166 Sum_probs=84.9
Q ss_pred ceeecCCcEEEEEEEecC--------CcEEEEEEecCCCcchhHHHHHHHHHHHhcCCCCc-cceeEEEEeeCceEEEEE
Q 002121 633 NEIGSGGYGKVYRGMLSD--------GQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNL-VGLVGFCFEQGEQMLVYE 703 (964)
Q Consensus 633 ~~lG~G~fg~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~E 703 (964)
+.+..|-...+|+....+ ++.+++|+..... .......+|.++++.+.-.++ .++++.+ .-++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEEE
Confidence 567677788999998753 5789999865432 222245689999988853344 4555533 2378999
Q ss_pred eccCCChhh-----------------hhcCC-----------CCCccchHHHHHHHHHH-------------------HH
Q 002121 704 FMANGTLRE-----------------SLSGR-----------SGIHLDWKRRLRIALGS-------------------AR 736 (964)
Q Consensus 704 ~~~~gsL~~-----------------~l~~~-----------~~~~l~~~~~~~i~~~i-------------------a~ 736 (964)
|++|..|.. .+|.. ...+.-|.++.++..++ ..
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 999866421 01110 11112244433333222 22
Q ss_pred HHHHHhh---------------------cCCCCeeccCCCCCcEEECCCCcEEEeeccccee
Q 002121 737 GLAYLHE---------------------LANPPIIHRDVKSTNILLDENLTAKVADFGLSKL 777 (964)
Q Consensus 737 gL~yLH~---------------------~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~~ 777 (964)
.+++|.+ .....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2333321 11245789999999999 8888999999998864
No 447
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=95.16 E-value=0.00057 Score=78.51 Aligned_cols=60 Identities=8% Similarity=0.005 Sum_probs=44.1
Q ss_pred hhHHHHHHHHhCcccc-eEEeecccccCCcceeEEEee-----c--------------CCCcceeeccceeeeeeEeecc
Q 002121 464 HSLEMSLWVKLGLTPG-SVFLQNPFFNIDDYLQIQVAL-----F--------------PSGEKSFNRSEVQKIGFELSNQ 523 (964)
Q Consensus 464 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~--------------~~~~~~~~~~~~~~~~~~~~~~ 523 (964)
.+.+++||-+..+.+. ++|||++|+.+.+ ++.+.|+ + +.|+|++|.|+.....+.+|..
T Consensus 13 ~~~~~~ww~~~~~~~~~~g~~P~~~v~~~~-~~~~~wy~~~w~hg~i~r~~ae~lL~~~~G~FLvR~S~~~~g~~~Lsv~ 91 (463)
T 3cxl_A 13 NLYFQGVWKSYLYQLQQEAPHPRRITCTCE-VENRPKYYGREFHGMISREAADQLLIVAEGSYLIRESQRQPGTYTLALR 91 (463)
T ss_dssp -----CCSCCHHHHHHHHSCCCEECCCCCC-CTTCCTTCCTTBCCSCCHHHHHHHHTTSTTEEEEEECSSSTTCEEEEEE
T ss_pred CCCCCCEEEEEecCcCccCCCCcCccCCcc-ccCCCCccccccccCCCHHHHHHHHcCCCCeEEEeccCCCCCCEEEEEE
Confidence 4456889987777765 5899999998764 6677888 3 5799999999988777887765
Q ss_pred e
Q 002121 524 T 524 (964)
Q Consensus 524 ~ 524 (964)
.
T Consensus 92 ~ 92 (463)
T 3cxl_A 92 F 92 (463)
T ss_dssp C
T ss_pred E
Confidence 4
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=93.47 E-value=0.049 Score=39.17 Aligned_cols=32 Identities=16% Similarity=0.044 Sum_probs=18.1
Q ss_pred CcceeehhHHHHHHHHHHHHHHHHHHhhhhhh
Q 002121 553 SPGVAAGIACGGAVLVLGLVGLGLYAIRQKKR 584 (964)
Q Consensus 553 ~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~r 584 (964)
..+.|++.+++|+++++++++..++++|+|++
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 34456666666666665555555555555443
No 449
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=93.42 E-value=0.05 Score=38.00 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=23.0
Q ss_pred CCCCCcceeehhHHHHHHHHHHHHHHHHHHhhh
Q 002121 549 GNSISPGVAAGIACGGAVLVLGLVGLGLYAIRQ 581 (964)
Q Consensus 549 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~ 581 (964)
.++.+.+.|+|++++.++.++++++++++++|+
T Consensus 5 ~~~ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 5 SRGLTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 345567888999988877766666666665554
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=92.69 E-value=0.11 Score=37.46 Aligned_cols=30 Identities=17% Similarity=-0.017 Sum_probs=16.0
Q ss_pred cceeehhHHHHHHHHHHHHHHHHHHhhhhh
Q 002121 554 PGVAAGIACGGAVLVLGLVGLGLYAIRQKK 583 (964)
Q Consensus 554 ~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 583 (964)
.+.|++.+++|+++++++++..++++|+|+
T Consensus 10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 10 IPSIATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp SSSSTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cceEEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 344566666666655555554455554443
No 451
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.47 E-value=1.1 Score=50.07 Aligned_cols=29 Identities=34% Similarity=0.487 Sum_probs=24.8
Q ss_pred eeccCCCCCcEEE------CCCCcEEEeeccccee
Q 002121 749 IIHRDVKSTNILL------DENLTAKVADFGLSKL 777 (964)
Q Consensus 749 ivH~Dlk~~NILl------~~~~~~kl~DFGla~~ 777 (964)
++|+|+.+.|||+ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 4699999999999 4567899999998764
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=87.07 E-value=0.42 Score=34.33 Aligned_cols=9 Identities=11% Similarity=0.099 Sum_probs=5.2
Q ss_pred ceeehhHHH
Q 002121 555 GVAAGIACG 563 (964)
Q Consensus 555 ~~i~~~~~~ 563 (964)
..++++++|
T Consensus 12 ~~Ia~~vVG 20 (44)
T 2jwa_A 12 TSIISAVVG 20 (44)
T ss_dssp HHHHHHHHH
T ss_pred cchHHHHHH
Confidence 345666666
No 453
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*
Probab=80.10 E-value=0.09 Score=51.45 Aligned_cols=71 Identities=21% Similarity=0.305 Sum_probs=57.6
Q ss_pred CCCCCCCchhHhhHHHHHHHHhCcccc-eEEeecccccCCcceeEEEeec-----------------CCCcceeecccee
Q 002121 453 SFRELSNVTVFHSLEMSLWVKLGLTPG-SVFLQNPFFNIDDYLQIQVALF-----------------PSGEKSFNRSEVQ 514 (964)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 514 (964)
+|++++-+.++.. +.+||....+..+ ++|+|.+|+.+...+..+.|++ +.|+|++|.|+..
T Consensus 30 s~~~Gd~i~v~~~-~~~Ww~~~~~~~g~~G~vP~~yv~~~~~l~~~~w~~g~isr~~ae~lL~~~~~~~G~FLVR~S~~~ 108 (175)
T 4d8k_A 30 GFEKGEQLRILEQ-SGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESEST 108 (175)
T ss_dssp CBCTTCEEEEEEC-CSSEEEEEETTTCCEEEEEGGGEEETTCSTTCTTBCSSCCHHHHHHHHHSTTCCTTCEEEEECSSS
T ss_pred ccccCCEEEEEcc-CCCEEEEEECCCCceeeeccccccccccccccceecCcccHHHHHHHHhcCCCCCCEEEEEECCCC
Confidence 5778888888777 6789988876444 6999999999988888888987 4799999999887
Q ss_pred eeeeEeecce
Q 002121 515 KIGFELSNQT 524 (964)
Q Consensus 515 ~~~~~~~~~~ 524 (964)
...+.+|...
T Consensus 109 ~g~y~LSv~~ 118 (175)
T 4d8k_A 109 AGSFSLSVRD 118 (175)
T ss_dssp TTCEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 7777777654
No 454
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.24 E-value=5.3 Score=39.88 Aligned_cols=115 Identities=12% Similarity=0.155 Sum_probs=76.1
Q ss_pred CCCCccceeEEEEeeCceEEEEEeccCC-ChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCCCCeeccCCCCCcE
Q 002121 681 HHKNLVGLVGFCFEQGEQMLVYEFMANG-TLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNI 759 (964)
Q Consensus 681 ~H~nIv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NI 759 (964)
.||+.+.. .+-.+.+...+.|+.-+.+ ++.. ++ .++...+++++..|+....+++. =+|-=|.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik-----~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK-----SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG-----GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH-----hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceE
Confidence 58888866 4555556555555543322 2222 32 36788999999999987766664 47888999999
Q ss_pred EECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCC
Q 002121 760 LLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIE 831 (964)
Q Consensus 760 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~ 831 (964)
+++.++.+++.=.|+-..+ +|.- .++..=.-.+=+++..+++++..|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l-------------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV-------------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTB-------------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCC-------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999877653322 2221 1222223456678889999988874
No 455
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=73.25 E-value=6.7 Score=39.27 Aligned_cols=115 Identities=11% Similarity=0.112 Sum_probs=75.5
Q ss_pred CCCCccceeEEEEeeCceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHH-HHhhcCCCCeeccCCCCCcE
Q 002121 681 HHKNLVGLVGFCFEQGEQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLA-YLHELANPPIIHRDVKSTNI 759 (964)
Q Consensus 681 ~H~nIv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivH~Dlk~~NI 759 (964)
.||++ -...-.+.+...+.|+.-+++-=...++ .++...+++++..++.... +++. -+|-=+.|+||
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceE
Confidence 57777 3344455666667676554433233333 3678899999999888776 6655 57888999999
Q ss_pred EECCCCcEEEeecccceeecCCCCCceeecccccCcccCccccccCCCCCchhHHHHHHHHHHHHhCCCCCC
Q 002121 760 LLDENLTAKVADFGLSKLVSDSSKGHVSTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVVMLELITAKQPIE 831 (964)
Q Consensus 760 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~S~Gvvl~elltg~~p~~ 831 (964)
++|.++.+++.=.|+-.. ++|.-. ++.-=.-.+=+++..++.++..|+
T Consensus 116 ~f~~~~~p~i~hRGi~~~-------------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKES-------------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EECTTCCEEESCCEETTT-------------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEeCCCcEEEEEcCCccc-------------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999987765332 233221 111123356677888888877763
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=71.54 E-value=2.4 Score=30.09 Aligned_cols=15 Identities=33% Similarity=0.319 Sum_probs=6.6
Q ss_pred ceeehhHHHHHHHHH
Q 002121 555 GVAAGIACGGAVLVL 569 (964)
Q Consensus 555 ~~i~~~~~~~~~~~~ 569 (964)
..+++.+++|.++++
T Consensus 13 ~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 13 LAVIGGVAVGVVLLL 27 (41)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred EEEEeehhHHHHHHH
Confidence 334444444444433
No 457
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=68.97 E-value=2.9 Score=32.42 Aligned_cols=18 Identities=39% Similarity=0.800 Sum_probs=10.9
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 002121 560 IACGGAVLVLGLVGLGLY 577 (964)
Q Consensus 560 ~~~~~~~~~~~l~~~~~~ 577 (964)
+++|+++.+++++.++++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 566666666666555554
No 458
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=47.32 E-value=12 Score=25.09 Aligned_cols=26 Identities=38% Similarity=0.512 Sum_probs=15.8
Q ss_pred CcceeehhHHHHHHHHHHHHHHHHHH
Q 002121 553 SPGVAAGIACGGAVLVLGLVGLGLYA 578 (964)
Q Consensus 553 ~~~~i~~~~~~~~~~~~~l~~~~~~~ 578 (964)
+.+.++|++++-++..+++++..+++
T Consensus 5 ~~gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 5 SPGVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEeEeHHHHHHHHHHHHHHhhe
Confidence 45677888877666655544444443
No 459
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=41.34 E-value=55 Score=34.80 Aligned_cols=79 Identities=22% Similarity=0.199 Sum_probs=43.4
Q ss_pred ceEEEEEeccCCChhhhhcCCCCCccchHHHHHHHHHHHHHHHHHhhcCC-CCeec-cCCCCCcEEECCCCc-EEEeecc
Q 002121 697 EQMLVYEFMANGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELAN-PPIIH-RDVKSTNILLDENLT-AKVADFG 773 (964)
Q Consensus 697 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivH-~Dlk~~NILl~~~~~-~kl~DFG 773 (964)
..+++|||++|..|.+.-+..-...+....... .+-.-+++++..... .|.+. .--.++|||+++++. +.++|-+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~--LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn 233 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTKSTMQQ--LGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSK 233 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCHHHHHH--HHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCC
T ss_pred cceehhhhcCCCccccchhhhhhhhcCHHHHHh--hchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCC
Confidence 467999999976665432221001122222111 112334666665432 22222 235789999977555 8899999
Q ss_pred ccee
Q 002121 774 LSKL 777 (964)
Q Consensus 774 la~~ 777 (964)
++..
T Consensus 234 ~af~ 237 (342)
T 1cja_A 234 IIPL 237 (342)
T ss_dssp CCCC
T ss_pred cccc
Confidence 8864
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=38.65 E-value=32 Score=29.53 Aligned_cols=46 Identities=11% Similarity=0.052 Sum_probs=25.7
Q ss_pred cCcccCCcccCCCCCCcEEEcccCcCccccCccccCCCCCCeeeccC
Q 002121 227 QLSGNIPESLGYVQTLEVLRLDRNALTGKVPTNLNNLTNVNELNLAH 273 (964)
Q Consensus 227 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 273 (964)
.++.+-..+|.++++|+.+.|..+ ++..-..+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344444455666666666666543 3324455666666666666654
No 461
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=34.01 E-value=2.6e+02 Score=32.30 Aligned_cols=83 Identities=14% Similarity=0.093 Sum_probs=51.6
Q ss_pred cceeEEEEeeCceEEEEEeccCCChhhhhcCCC-------------C--CccchHHHHHHHHHHHH--HHHHHhhcCCCC
Q 002121 686 VGLVGFCFEQGEQMLVYEFMANGTLRESLSGRS-------------G--IHLDWKRRLRIALGSAR--GLAYLHELANPP 748 (964)
Q Consensus 686 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~-------------~--~~l~~~~~~~i~~~ia~--gL~yLH~~~~~~ 748 (964)
++.+.+........+ .|++++.++.+.+...+ . ....|..+..++...|- .+.|+=.
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 455555555555444 57887655555443211 0 11235566666666553 3455432
Q ss_pred eeccCCCCCcEEECCCCcEEEeecccce
Q 002121 749 IIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 749 ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
=+|=.++|||++.+|++.=+|||.+-
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 35888999999999999999999873
No 462
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=32.34 E-value=2.3e+02 Score=35.23 Aligned_cols=59 Identities=15% Similarity=0.108 Sum_probs=37.3
Q ss_pred hhhhhcCCCCCccchHH-HHHHHHHHHH--HHHHHhhcCCCCeeccCCCCCcEEECCCCcEEEeecccce
Q 002121 710 LRESLSGRSGIHLDWKR-RLRIALGSAR--GLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 710 L~~~l~~~~~~~l~~~~-~~~i~~~ia~--gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
|.+|+.... ....|.+ +..++...|- .+.|+=. =+|=.++|||++.+|++.=+|||.+-
T Consensus 900 L~~~f~~~~-~~~~~~~ar~nF~~S~A~ysvv~YiLg-------igDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 900 LHQWLKDKN-KGEIYDAAIDLFTRSCAGYCVATFILG-------IGDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp HHHHHHTTS-CTTSHHHHHHHHHHHHHHHHHHHHHHT-------CCCCCTTTEEEETTSCEEECCCCCCS
T ss_pred HHHHHHhcC-ChHHHHHHHHHHHHHhhhhhheEEEEe-------ecCCCCcceEEeCCCCEEEEeehhhh
Confidence 444444332 2334543 3455555442 3444432 36888999999999999999999874
No 463
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=30.41 E-value=3.4e+02 Score=31.99 Aligned_cols=82 Identities=17% Similarity=0.104 Sum_probs=48.6
Q ss_pred ceeEEEEeeCceEEEEEeccCCChhhhhcCCC----------CCc---c--chHHHHHHHHHHHH--HHHHHhhcCCCCe
Q 002121 687 GLVGFCFEQGEQMLVYEFMANGTLRESLSGRS----------GIH---L--DWKRRLRIALGSAR--GLAYLHELANPPI 749 (964)
Q Consensus 687 ~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~----------~~~---l--~~~~~~~i~~~ia~--gL~yLH~~~~~~i 749 (964)
+.+.+........+ .|++++.+|.+.+...+ ... + ....+..++..+|- .+.|+=.
T Consensus 477 ~~Y~Vipls~~~GL-IE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILG------ 549 (696)
T 2x6h_A 477 TPYKVLATSSKHGF-LQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLG------ 549 (696)
T ss_dssp CCCCEEESSTTCEE-EECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred eccEEEeccCCCCe-eeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHcc------
Confidence 34455544444443 47777666666554321 011 1 12345556555542 2344322
Q ss_pred eccCCCCCcEEECCCCcEEEeecccce
Q 002121 750 IHRDVKSTNILLDENLTAKVADFGLSK 776 (964)
Q Consensus 750 vH~Dlk~~NILl~~~~~~kl~DFGla~ 776 (964)
=+|=.++||||+.+|++.=+|||.+-
T Consensus 550 -lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 550 -VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp -CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred -CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 36899999999999999999999863
No 464
>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.24 E-value=5.4 Score=36.24 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=33.3
Q ss_pred EeecccccCCcceeEEEeec-------C-CCcceeeccceeeeeeEeecce
Q 002121 482 FLQNPFFNIDDYLQIQVALF-------P-SGEKSFNRSEVQKIGFELSNQT 524 (964)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~ 524 (964)
+||++|++..+.++.+.|++ + .|+|++|.|+ ....+.+|...
T Consensus 15 ~iPsnyv~~~~~l~~~~Wyh~Ll~~g~~~dG~FLVR~S~-~~g~y~LSv~~ 64 (126)
T 2cr4_A 15 LPNSVFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSS-TKSGKVLVVWD 64 (126)
T ss_dssp SCTTTBCSCCCHHHHHHHHHHHSTTSCCCTTCEEEEECS-STTCEEEEEEE
T ss_pred CCCHhhcCcccccccCCCHHHHhhCCCCCCCeEEEEecC-CCCCEEEEEEe
Confidence 56788888888888888876 3 3999999999 77788887655
No 465
>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=28.00 E-value=14 Score=33.19 Aligned_cols=42 Identities=29% Similarity=0.174 Sum_probs=32.3
Q ss_pred eecccccCCcceeEEEeec-----------------CCCcceeeccceeeeeeEeecce
Q 002121 483 LQNPFFNIDDYLQIQVALF-----------------PSGEKSFNRSEVQKIGFELSNQT 524 (964)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~ 524 (964)
+|++|+++...++.+.|++ +.|+|++|.|+.....+.+|...
T Consensus 2 ~psnyv~~~~~l~~~~WyhG~isR~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~ 60 (121)
T 2dly_A 2 SSGSSGAEDRSLQAEPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLD 60 (121)
T ss_dssp CSCCCCCSSGGGGGCSSBCSSCCHHHHHHHHTSSSCCTTCEEEEECSSSSSCEEEEEES
T ss_pred CCccccccccccCcCCccccCCCHHHHHHHHhcCCCCCCEEEEEcCCCCCCceEEEEEE
Confidence 4677777777777788877 45999999998877777777654
No 466
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=25.62 E-value=4 Score=33.62 Aligned_cols=49 Identities=20% Similarity=0.272 Sum_probs=28.9
Q ss_pred CCCCCCCchhHhhHHHHHHHHhCcccc-eEEeecccccCCcceeEEEeec
Q 002121 453 SFRELSNVTVFHSLEMSLWVKLGLTPG-SVFLQNPFFNIDDYLQIQVALF 501 (964)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 501 (964)
+|++++.+++....+.+||.......+ .+++|.+|+.+.++++.+.|.=
T Consensus 23 s~~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~~~~~~~ 72 (79)
T 3cqt_A 23 SFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPVDRLDYKDDDD 72 (79)
T ss_dssp CBCTTCEEEEEECTTSSEEEEEETTTCCEEEEEGGGEEEC----------
T ss_pred CCCCCCEEEEEEecCCCeEEEEECCCCCEEEeehHHeEECCccccCCCCC
Confidence 466677777776666778877664344 5899999999988888766643
No 467
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=24.11 E-value=1.3e+02 Score=25.72 Aligned_cols=44 Identities=20% Similarity=0.181 Sum_probs=19.1
Q ss_pred CccccccCCcCCCCcccEEecccCCCCCCCCCCCCCCcccchhhcc
Q 002121 75 GLTGKLSGDIGGLTELRSLDLSYNGGLTGSLSPRIGDLQKLNILIL 120 (964)
Q Consensus 75 ~l~g~~~~~l~~l~~L~~L~L~~N~~l~~~~p~~l~~l~~L~~L~L 120 (964)
+++.+-..+|.+.+.|+.+.|-.+ +...-...|.++.+|+.+.+
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~--v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN--IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT--SSCCCTTSSTTCTTCCCEEE
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc--hheEcHHHHhccCCccEEEE
Confidence 344344445555555555555433 22222333444444444443
No 468
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=21.68 E-value=5.3 Score=33.31 Aligned_cols=50 Identities=16% Similarity=0.215 Sum_probs=32.0
Q ss_pred CCCCCCCchhHhhHHHHHHHHhCccc-ceEEeecccccCCcceeEEEeecC
Q 002121 453 SFRELSNVTVFHSLEMSLWVKLGLTP-GSVFLQNPFFNIDDYLQIQVALFP 502 (964)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 502 (964)
+|.+++-++++...+.+||....... ..+++|.+|+.+.+.+..+.|.-|
T Consensus 24 sf~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~~e~~~~~ 74 (84)
T 4ag1_C 24 SFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPVDSIQGEQKLIS 74 (84)
T ss_dssp CBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEETTTCC-------
T ss_pred cccCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEECCCcccccCCCc
Confidence 45666666666666667887666433 468999999999999888877665
Done!