Query 002122
Match_columns 964
No_of_seqs 451 out of 1830
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 13:15:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002122.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002122hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ul4_A SPL4, squamosa promoter 100.0 4.5E-39 1.5E-43 292.5 0.2 91 141-231 2-92 (94)
2 1ul5_A SPL7, squamosa promoter 100.0 9.2E-38 3.1E-42 281.1 -0.3 83 146-228 2-84 (88)
3 1wj0_A Squamosa promoter-bindi 99.9 8.1E-29 2.8E-33 208.9 1.7 59 146-204 2-60 (60)
4 1oy3_D Transcription factor in 99.9 8.1E-23 2.8E-27 210.3 17.0 214 613-870 8-267 (282)
5 4gpm_A Engineered protein OR26 99.9 1.2E-22 4.1E-27 201.8 16.4 155 653-858 8-163 (169)
6 2rfa_A Transient receptor pote 99.9 1.2E-21 3.9E-26 197.8 17.3 205 615-858 4-224 (232)
7 2f8y_A Notch homolog 1, transl 99.9 1.6E-21 5.5E-26 195.2 17.7 192 614-858 25-218 (223)
8 2dzn_A Probable 26S proteasome 99.9 4.1E-21 1.4E-25 192.4 18.6 195 615-857 3-201 (228)
9 1k1a_A B-cell lymphoma 3-encod 99.9 4.2E-21 1.4E-25 193.5 18.7 195 614-857 9-209 (241)
10 2xai_A ASB-9, ankyrin repeat a 99.9 2.1E-21 7.1E-26 201.7 16.9 201 614-869 3-207 (261)
11 1yyh_A HN1;, notch 1, ankyrin 99.9 1.8E-21 6.1E-26 200.9 16.2 189 613-854 56-246 (253)
12 3hra_A Ankyrin repeat family p 99.9 2.4E-21 8.3E-26 190.9 16.0 188 615-854 6-201 (201)
13 3b7b_A Euchromatic histone-lys 99.9 5.5E-21 1.9E-25 193.0 18.6 193 613-857 10-203 (237)
14 3aji_A 26S proteasome non-ATPa 99.9 2.2E-21 7.4E-26 195.3 15.5 190 615-857 7-198 (231)
15 1yyh_A HN1;, notch 1, ankyrin 99.9 2E-21 6.9E-26 200.5 15.5 195 614-858 10-217 (253)
16 3aji_A 26S proteasome non-ATPa 99.9 8.4E-21 2.9E-25 191.0 18.6 191 613-856 39-230 (231)
17 3v31_A Ankyrin repeat family A 99.9 6.6E-21 2.3E-25 183.6 16.4 159 649-858 3-162 (167)
18 3v30_A DNA-binding protein rfx 99.9 9.5E-21 3.2E-25 183.4 17.2 158 650-858 3-162 (172)
19 3utm_A Tankyrase-1; tankyrase, 99.8 1.4E-20 4.8E-25 198.7 18.7 200 614-857 58-306 (351)
20 1ikn_D Protein (I-kappa-B-alph 99.8 1E-21 3.4E-26 199.6 9.5 197 614-857 8-210 (236)
21 3ljn_A Hypothetical protein; a 99.8 4.4E-21 1.5E-25 207.4 15.0 131 691-856 137-269 (364)
22 4b93_B Ankyrin repeat domain-c 99.8 7.3E-21 2.5E-25 201.2 15.9 202 615-869 12-226 (269)
23 1ihb_A P18-INK4C(INK6), cyclin 99.8 8.5E-21 2.9E-25 181.2 14.3 155 650-856 6-162 (162)
24 2rfm_A Putative ankyrin repeat 99.8 9.2E-21 3.1E-25 187.0 14.8 158 646-854 32-190 (192)
25 2etb_A Transient receptor pote 99.8 3.2E-21 1.1E-25 198.2 11.7 209 616-857 4-247 (256)
26 3d9h_A CDNA FLJ77766, highly s 99.8 1.8E-20 6.2E-25 198.0 17.5 202 612-868 57-262 (285)
27 3jxi_A Vanilloid receptor-rela 99.8 3.6E-21 1.2E-25 197.9 11.5 195 632-858 25-252 (260)
28 1wdy_A 2-5A-dependent ribonucl 99.8 3.6E-20 1.2E-24 189.5 18.6 202 614-858 72-280 (285)
29 2f8y_A Notch homolog 1, transl 99.8 1.3E-20 4.4E-25 188.6 14.8 174 634-857 9-184 (223)
30 2y1l_E Darpin-8.4; hydrolase-i 99.8 3.4E-20 1.2E-24 180.1 16.5 155 649-854 14-169 (169)
31 1k1a_A B-cell lymphoma 3-encod 99.8 3.1E-21 1E-25 194.5 9.5 194 614-855 46-240 (241)
32 2fo1_E LIN-12 protein; beta-ba 99.8 1.1E-20 3.7E-25 207.4 14.4 204 613-857 165-372 (373)
33 2rfa_A Transient receptor pote 99.8 3E-20 1E-24 187.5 15.8 176 649-857 3-184 (232)
34 4gpm_A Engineered protein OR26 99.8 3.5E-20 1.2E-24 184.1 16.0 125 693-857 5-129 (169)
35 1awc_B Protein (GA binding pro 99.8 3.3E-20 1.1E-24 176.9 15.2 149 651-851 4-153 (153)
36 4hbd_A KN motif and ankyrin re 99.8 3E-20 1E-24 196.1 15.3 181 624-855 84-274 (276)
37 3b7b_A Euchromatic histone-lys 99.8 4.5E-20 1.5E-24 186.3 15.8 189 614-854 44-233 (237)
38 1n11_A Ankyrin; clathrin, BAND 99.8 5.5E-20 1.9E-24 203.3 17.8 187 615-854 213-400 (437)
39 2pnn_A Transient receptor pote 99.8 2.6E-20 8.8E-25 193.6 14.3 207 615-858 14-260 (273)
40 1n11_A Ankyrin; clathrin, BAND 99.8 6.9E-20 2.3E-24 202.5 18.5 202 614-868 179-384 (437)
41 1d9s_A Cyclin-dependent kinase 99.8 1.1E-20 3.8E-25 177.5 10.3 125 691-856 11-136 (136)
42 4b93_B Ankyrin repeat domain-c 99.8 4.3E-21 1.5E-25 202.9 8.1 182 615-851 53-236 (269)
43 2jab_A H10-2-G3; HER2, darpin, 99.8 4.1E-20 1.4E-24 173.7 13.8 124 691-854 13-136 (136)
44 3twr_A Tankyrase-2; ankyrin re 99.8 2.5E-20 8.4E-25 179.3 12.2 157 648-855 7-164 (165)
45 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.2E-19 4.2E-24 164.6 15.0 124 693-856 3-126 (126)
46 1s70_B 130 kDa myosin-binding 99.8 4.3E-20 1.5E-24 192.9 12.8 216 615-869 41-273 (299)
47 1oy3_D Transcription factor in 99.8 1E-19 3.6E-24 187.1 15.2 189 646-858 6-219 (282)
48 4g8k_A 2-5A-dependent ribonucl 99.8 2E-19 6.9E-24 192.4 17.8 233 616-859 27-301 (337)
49 1wdy_A 2-5A-dependent ribonucl 99.8 5.1E-19 1.7E-23 181.0 19.1 200 614-856 39-245 (285)
50 3f6q_A Integrin-linked protein 99.8 8.9E-20 3E-24 178.4 13.0 160 649-858 5-165 (179)
51 1s70_B 130 kDa myosin-binding 99.8 2.1E-19 7.3E-24 187.6 16.4 171 648-868 39-239 (299)
52 1bi7_B P16INK4A, MTS1, multipl 99.8 2.4E-20 8.3E-25 179.2 8.4 127 691-858 11-138 (156)
53 3kea_A K1L; tropism, ANK repea 99.8 5.8E-20 2E-24 194.5 11.4 189 614-859 31-223 (285)
54 2dzn_A Probable 26S proteasome 99.8 1.2E-19 4.2E-24 181.7 13.0 186 614-853 36-227 (228)
55 2etb_A Transient receptor pote 99.8 2E-19 6.9E-24 184.8 14.8 135 691-857 42-207 (256)
56 3d9h_A CDNA FLJ77766, highly s 99.8 1.3E-19 4.3E-24 191.6 13.5 188 614-858 92-281 (285)
57 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2.7E-19 9.2E-24 170.1 14.2 150 651-853 4-155 (156)
58 3eu9_A Huntingtin-interacting 99.8 2.9E-19 1E-23 178.7 15.0 213 616-857 11-236 (240)
59 3twr_A Tankyrase-2; ankyrin re 99.8 4.8E-19 1.7E-23 170.2 15.7 127 692-857 8-134 (165)
60 1awc_B Protein (GA binding pro 99.8 4.8E-19 1.6E-23 168.9 15.0 124 693-857 3-126 (153)
61 2xai_A ASB-9, ankyrin repeat a 99.8 7.2E-19 2.5E-23 182.6 16.9 159 648-858 2-161 (261)
62 2pnn_A Transient receptor pote 99.8 1.8E-19 6E-24 187.3 12.1 178 644-858 8-220 (273)
63 3eu9_A Huntingtin-interacting 99.8 7.4E-19 2.5E-23 175.8 16.1 159 646-854 6-166 (240)
64 3v30_A DNA-binding protein rfx 99.8 6.8E-19 2.3E-23 170.3 15.0 126 693-857 3-128 (172)
65 3ljn_A Hypothetical protein; a 99.8 3.5E-19 1.2E-23 192.5 13.9 199 614-858 20-238 (364)
66 3f6q_A Integrin-linked protein 99.8 7.9E-19 2.7E-23 171.6 15.1 127 692-857 5-131 (179)
67 1ikn_D Protein (I-kappa-B-alph 99.8 2.3E-19 7.9E-24 182.2 11.4 172 646-858 5-178 (236)
68 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.2E-18 4.2E-23 169.1 15.7 126 692-857 14-139 (169)
69 3hra_A Ankyrin repeat family p 99.8 1.6E-18 5.4E-23 170.8 16.7 161 648-858 4-172 (201)
70 3utm_A Tankyrase-1; tankyrase, 99.8 2.1E-18 7.3E-23 182.1 18.7 207 616-858 26-274 (351)
71 2rfm_A Putative ankyrin repeat 99.8 6.4E-19 2.2E-23 173.8 13.6 126 692-857 35-160 (192)
72 3v31_A Ankyrin repeat family A 99.8 9.3E-19 3.2E-23 168.6 14.4 125 693-857 4-128 (167)
73 1ycs_B 53BP2, P53BP2; ankyrin 99.8 2.5E-19 8.5E-24 184.4 10.7 159 648-858 4-166 (239)
74 1ihb_A P18-INK4C(INK6), cyclin 99.8 4.1E-19 1.4E-23 169.5 11.3 125 691-856 4-128 (162)
75 3jxi_A Vanilloid receptor-rela 99.8 5.5E-19 1.9E-23 181.6 12.6 134 692-857 46-211 (260)
76 2fo1_E LIN-12 protein; beta-ba 99.8 2E-18 6.8E-23 189.5 17.3 186 634-858 151-340 (373)
77 3c5r_A BARD-1, BRCA1-associate 99.8 1.5E-19 5.1E-24 169.3 6.6 126 690-855 8-133 (137)
78 4g8k_A 2-5A-dependent ribonucl 99.8 5.2E-18 1.8E-22 181.5 19.1 177 646-858 122-328 (337)
79 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.6E-18 5.4E-23 152.9 11.4 92 734-856 2-93 (93)
80 3aaa_C Myotrophin, protein V-1 99.8 2E-18 6.8E-23 159.2 12.4 116 692-850 7-122 (123)
81 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2.3E-18 8E-23 163.6 13.3 122 692-853 2-123 (156)
82 1dcq_A PYK2-associated protein 99.8 6E-18 2.1E-22 180.2 16.9 139 693-866 131-272 (278)
83 3kea_A K1L; tropism, ANK repea 99.8 3.2E-18 1.1E-22 181.2 14.4 158 646-858 28-188 (285)
84 2vge_A RELA-associated inhibit 99.7 2.9E-18 1E-22 176.9 11.0 127 692-858 21-150 (229)
85 1sw6_A Regulatory protein SWI6 99.7 6.1E-18 2.1E-22 182.6 13.7 184 627-858 58-310 (327)
86 3deo_A Signal recognition part 99.7 4.4E-18 1.5E-22 167.9 11.5 110 691-841 43-153 (183)
87 3t8k_A Uncharacterized protein 99.7 2.5E-18 8.6E-23 173.0 9.9 127 692-858 38-181 (186)
88 4hbd_A KN motif and ankyrin re 99.7 8.4E-18 2.9E-22 177.4 13.8 161 649-857 76-243 (276)
89 1ycs_B 53BP2, P53BP2; ankyrin 99.7 3.1E-18 1.1E-22 176.1 10.2 126 692-858 5-130 (239)
90 3ehr_A Osteoclast-stimulating 99.7 2.1E-18 7.3E-23 174.2 8.6 127 693-858 74-200 (222)
91 3ui2_A Signal recognition part 99.7 9.3E-18 3.2E-22 174.0 12.3 124 692-856 45-185 (244)
92 3lvq_E ARF-GAP with SH3 domain 99.7 1.4E-17 4.8E-22 190.6 14.7 131 694-858 134-267 (497)
93 2b0o_E UPLC1; arfgap, structur 99.7 3.5E-17 1.2E-21 176.3 14.6 131 693-857 152-285 (301)
94 1sw6_A Regulatory protein SWI6 99.7 1.2E-17 4E-22 180.4 9.0 185 632-842 113-327 (327)
95 3jue_A Arfgap with coiled-coil 99.7 8.5E-17 2.9E-21 179.3 13.8 126 693-856 200-326 (368)
96 3c5r_A BARD-1, BRCA1-associate 99.7 2.1E-16 7.2E-21 147.9 12.0 97 730-857 6-102 (137)
97 2l6b_A NR1C; ankyrin, consensu 99.7 1.2E-16 3.9E-21 145.4 9.2 97 730-857 5-101 (115)
98 3aaa_C Myotrophin, protein V-1 99.7 3.3E-16 1.1E-20 144.3 11.7 94 733-857 6-99 (123)
99 1bi7_B P16INK4A, MTS1, multipl 99.7 1.2E-16 4.2E-21 153.3 9.0 141 646-838 9-151 (156)
100 2zgd_A 3 repeat synthetic anky 99.6 6.6E-16 2.3E-20 140.9 9.7 90 731-851 21-110 (110)
101 2jab_A H10-2-G3; HER2, darpin, 99.6 8.2E-16 2.8E-20 144.3 10.1 95 732-857 12-106 (136)
102 3t8k_A Uncharacterized protein 99.6 1.7E-16 5.8E-21 159.7 5.8 134 694-868 8-161 (186)
103 1d9s_A Cyclin-dependent kinase 99.6 5.7E-16 2E-20 145.4 8.9 95 731-857 9-104 (136)
104 2vge_A RELA-associated inhibit 99.6 1.5E-15 5.2E-20 156.7 10.8 107 731-868 18-128 (229)
105 1n0r_A 4ANK, 4 ankyrin repeats 99.6 2.8E-15 9.5E-20 135.8 11.0 94 733-857 1-94 (126)
106 3ehr_A Osteoclast-stimulating 99.6 4.3E-15 1.5E-19 150.0 11.6 97 731-857 70-166 (222)
107 2l6b_A NR1C; ankyrin, consensu 99.6 2.6E-15 9E-20 136.4 8.3 105 691-835 8-112 (115)
108 2b0o_E UPLC1; arfgap, structur 99.6 3E-15 1E-19 161.3 8.3 143 651-844 153-299 (301)
109 2aja_A Ankyrin repeat family p 99.6 2.6E-16 9E-21 175.7 -0.7 156 649-857 92-251 (376)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.5 1.8E-14 6E-19 126.9 10.7 88 693-814 3-90 (93)
111 2aja_A Ankyrin repeat family p 99.5 8.2E-16 2.8E-20 171.8 1.2 129 693-856 93-224 (376)
112 3deo_A Signal recognition part 99.5 1.8E-14 6.2E-19 142.0 10.4 94 732-857 42-136 (183)
113 3ui2_A Signal recognition part 99.5 3.3E-14 1.1E-18 147.3 9.3 94 732-857 43-137 (244)
114 3lvq_E ARF-GAP with SH3 domain 99.4 2.4E-13 8.2E-18 155.6 11.9 139 651-840 134-276 (497)
115 3jue_A Arfgap with coiled-coil 99.4 1.4E-12 4.8E-17 145.4 10.6 94 734-858 199-295 (368)
116 1dcq_A PYK2-associated protein 99.3 3.7E-12 1.3E-16 135.6 10.8 100 734-858 130-232 (278)
117 2zgd_A 3 repeat synthetic anky 99.3 4E-12 1.4E-16 115.8 9.4 87 691-811 23-109 (110)
118 1uad_C RSEC5, exocyst complex 55.1 29 0.001 31.5 7.2 38 523-562 7-45 (99)
119 4hw6_A Hypothetical protein, I 29.6 85 0.0029 35.1 7.2 70 520-607 15-85 (433)
120 2cxk_A Camta1, calmodulin bind 28.9 50 0.0017 30.0 4.2 45 523-568 6-50 (95)
121 3tc9_A Hypothetical hydrolase; 21.3 1.6E+02 0.0055 32.7 7.4 66 524-607 18-83 (430)
No 1
>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=100.00 E-value=4.5e-39 Score=292.52 Aligned_cols=91 Identities=63% Similarity=1.065 Sum_probs=80.5
Q ss_pred CCCCCCCCceeccCCchhhccChhhhcccccchhhcCcceeeeCCcchhhhhhhccCcccccccCccchHHHHHhhhhhh
Q 002122 141 GGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKR 220 (964)
Q Consensus 141 ~~~~~~~~~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~hn~r 220 (964)
++++++.++||||||++||+.+|.||+||||||.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+|
T Consensus 2 ~~~~~~~~~CqV~GC~~dL~~~k~Y~rR~rvCe~H~ka~~V~~~G~~~RFCQQCsrFH~L~eFD~~kRSCR~rL~~hn~R 81 (94)
T 1ul4_A 2 SSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNER 81 (94)
T ss_dssp ------CCCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCC
T ss_pred CCCCCCCCceecCCCCcchhhHHHHHHhhhhhHHHhcCCEEEECChhHHHHHHHhccCCHHHhccccchHHHHHHHHHHH
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCC
Q 002122 221 RRKTNPDAVAN 231 (964)
Q Consensus 221 rr~~~~~~~~~ 231 (964)
|||+++++...
T Consensus 82 RRk~~~~~~~~ 92 (94)
T 1ul4_A 82 RRKSSGESGPS 92 (94)
T ss_dssp CCSCCCC----
T ss_pred hccCCCCcCCC
Confidence 99999987653
No 2
>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=100.00 E-value=9.2e-38 Score=281.14 Aligned_cols=83 Identities=52% Similarity=0.962 Sum_probs=79.5
Q ss_pred CCCceeccCCchhhccChhhhcccccchhhcCcceeeeCCcchhhhhhhccCcccccccCccchHHHHHhhhhhhhccCC
Q 002122 146 SRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTN 225 (964)
Q Consensus 146 ~~~~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~hn~rrr~~~ 225 (964)
+.++||||||++||+.+|+||+||||||.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+||||++
T Consensus 2 ~~~~CqV~GC~~dLs~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~ 81 (88)
T 1ul5_A 2 SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKP 81 (88)
T ss_dssp -CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCS
T ss_pred CCCeeecCCCCCChhHhhHHHhhccccHHHcCCCEEEECCEeeHHHHHhccccChhhhccccchHHHHHHHHHHHhccCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCC
Q 002122 226 PDA 228 (964)
Q Consensus 226 ~~~ 228 (964)
++.
T Consensus 82 ~~~ 84 (88)
T 1ul5_A 82 VDK 84 (88)
T ss_dssp CSS
T ss_pred ccC
Confidence 775
No 3
>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=99.94 E-value=8.1e-29 Score=208.93 Aligned_cols=59 Identities=78% Similarity=1.372 Sum_probs=57.1
Q ss_pred CCCceeccCCchhhccChhhhcccccchhhcCcceeeeCCcchhhhhhhccCccccccc
Q 002122 146 SRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFD 204 (964)
Q Consensus 146 ~~~~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd 204 (964)
+.++|||+||++||+.+|+|||||||||.|+||++|+++|.++||||||+|||+|+|||
T Consensus 2 ~~~~CqV~gC~~dl~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQCsrFH~L~eFD 60 (60)
T 1wj0_A 2 SAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60 (60)
T ss_dssp -CEECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred CCceeecCCCCcChhHhHHHhhccccChhHcCCCEEEECCEEEehhhhccCccCcccCC
Confidence 46899999999999999999999999999999999999999999999999999999998
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.89 E-value=8.1e-23 Score=210.33 Aligned_cols=214 Identities=18% Similarity=0.101 Sum_probs=162.8
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcc---hhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcC
Q 002122 613 STFFPFIVAEEDVCSEIRMLESALEFNRTD---ADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFP 688 (964)
Q Consensus 613 s~ffP~LVad~~iCsEI~~LE~~le~~a~~---~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~q 688 (964)
.+..|+++|... +.+..++.+++.++.. ...+..|.+++|.+| .+.+..+.+|++++......+
T Consensus 8 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~---------- 75 (282)
T 1oy3_D 8 DGDTALHLAVIH--QHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAE---------- 75 (282)
T ss_dssp TCCCHHHHHHHT--TCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC----------
T ss_pred CCCcHHHHHHHc--CCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC----------
Confidence 347899987765 7788888899887762 233567899999999 588899999999875332222
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC--------------------------------------CCchhh
Q 002122 689 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE--------------------------------------HPSLDL 730 (964)
Q Consensus 689 l~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~--------------------------------------~~~le~ 730 (964)
....+|||+|+..++.+++++|++........... ......
T Consensus 76 -~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T 1oy3_D 76 -RGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAE 154 (282)
T ss_dssp -TTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCC
T ss_pred -CCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCc
Confidence 23578999999999999999999865432110000 000112
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCC-CCChHHHHHHhhCCCHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVLD 809 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~-~G~TPLHiAA~~~G~~dVV~ 809 (964)
+..|.||||+|++.|+.++|++||++ |+ ++|..+. .|.||||+|+. .|+.++|+
T Consensus 155 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~~~~~g~tpL~~A~~-~~~~~~v~ 209 (282)
T 1oy3_D 155 NYDGHTPLHVAVIHKDAEMVRLLRDA-------GA-----------------DLNKPEPTCGRTPLHLAVE-AQAASVLE 209 (282)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHH-------TC-----------------CTTCCCTTTCCCHHHHHHH-TTCHHHHH
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCCCCCCCcCHHHHHHH-cCCHHHHH
Confidence 44688999999999999999999999 77 7888875 49999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCCC---CCCceeecCCC
Q 002122 810 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPN---GGHVVVDICGV 870 (964)
Q Consensus 810 lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~~---~~~v~v~ip~~ 870 (964)
+|+++ |++++.+|..|.||||+|+.+|+.+++++|.+++++... .+.+.+.+...
T Consensus 210 ~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 210 LLLKA------GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp HHHHT------TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred HHHHc------CCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 99999 999999999999999999999999999999999987542 34555555443
No 5
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=1.2e-22 Score=201.85 Aligned_cols=155 Identities=23% Similarity=0.209 Sum_probs=127.7
Q ss_pred cHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhc
Q 002122 653 TKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLA 731 (964)
Q Consensus 653 ~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~ 731 (964)
+..+| .+.+..+.+||+++......+ ...+++|++|+..++..+++.||+.+++.+ ..+
T Consensus 8 L~~Aa~~G~~~~v~~Ll~~Gadvn~~d-----------~~g~t~l~~a~~~~~~~~~~~ll~~gad~~---------~~d 67 (169)
T 4gpm_A 8 LIEAAENGNKDRVKDLIENGADVNASD-----------SDGRTPLHHAAENGHKEVVKLLISKGADVN---------AKD 67 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCC
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcC-----------CCCCCHHHHHHHcCCHHHHHHHHhcccchh---------hhc
Confidence 34455 366667777777764322222 235789999999999999999999654322 135
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHh
Q 002122 732 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 811 (964)
Q Consensus 732 l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lL 811 (964)
..|+||||+|++.|+.++|++||++ |+ ++|.+|..|+||||+||. .|+.++|++|
T Consensus 68 ~~g~TpLh~A~~~g~~~~v~~Ll~~-------ga-----------------dvn~~d~~G~TpLh~A~~-~g~~~~v~~L 122 (169)
T 4gpm_A 68 SDGRTPLHHAAENGHKEVVKLLISK-------GA-----------------DVNAKDSDGRTPLHHAAE-NGHKEVVKLL 122 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHC-------cC-----------------CCCCCCCCCCCHHHHHHH-cCCHHHHHHH
Confidence 5689999999999999999999999 88 899999999999999999 9999999999
Q ss_pred hcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 812 TDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 812 L~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++ ||+++.+|.+|.||||+|+.+|+.+++++|++++++..
T Consensus 123 l~~------gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 123 ISK------GADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred HHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 999 99999999999999999999999999999999999875
No 6
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.87 E-value=1.2e-21 Score=197.82 Aligned_cols=205 Identities=15% Similarity=0.096 Sum_probs=160.6
Q ss_pred CcceeecchhhhhHHHHHHHHhhh-cCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEF-NRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~-~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
-.|+++|... +.+..++.+++. +......+..|.+++|.+| .+.+..+.+|++++....... ........
T Consensus 4 ~t~L~~A~~~--g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~------~~~~~~~g 75 (232)
T 2rfa_A 4 ESPLLLAAKE--NDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEP------MTSELYEG 75 (232)
T ss_dssp TCHHHHHHHT--TCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCC------CCSTTTTT
T ss_pred CCHHHHHHHc--CCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcccc------ccccCCCC
Confidence 4677776654 788889999987 6665555678999999999 488888888888764321110 00111235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCC----CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE----HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~----~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
.++||+|+..|+.+++++||+.+++....... ......+..|.||||+|++.|+.++|++||++ |+
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga--- 145 (232)
T 2rfa_A 76 QTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH-------GA--- 145 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-------TC---
T ss_pred cCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-------CC---
Confidence 78999999999999999999976653321100 00001133689999999999999999999999 87
Q ss_pred ccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHH----HHhhcCCCCCcccccc------ccCCCCCCCHHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVL----DALTDDPGMVGIEAWK------NARDSSGSTPEDYA 838 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV----~lLL~~p~~vg~gAdi------narD~~G~TPLh~A 838 (964)
++|.+|..|.||||+|+. .|+.+++ ++|+++ |++. +.+|..|.||||+|
T Consensus 146 --------------~~~~~d~~g~t~L~~A~~-~~~~~~~~~i~~~Ll~~------g~~~~~~~~~~~~~~~g~tpl~~A 204 (232)
T 2rfa_A 146 --------------DIRAQDSLGNTVLHILIL-QPNKTFACQMYNLLLSY------DGGDHLKSLELVPNNQGLTPFKLA 204 (232)
T ss_dssp --------------CTTCCCTTSCCHHHHHHT-CSCHHHHHHHHHHHHHT------TCSCSSCCGGGCCCTTSCCHHHHH
T ss_pred --------------CCCCCCCCCCCHHHHHHH-cCChHHHHHHHHHHHhc------CCchhhhhhhccCCCCCCCHHHHH
Confidence 899999999999999999 9999988 999999 8887 68999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcCC
Q 002122 839 RLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 839 ~~rGh~svv~LL~~k~ak~~ 858 (964)
+.+||.+++++|.+++....
T Consensus 205 ~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 205 GVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp HHHTCHHHHHHHHHHHHHC-
T ss_pred HHcCCHHHHHHHHhcCccch
Confidence 99999999999999987654
No 7
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.87 E-value=1.6e-21 Score=195.16 Aligned_cols=192 Identities=17% Similarity=0.123 Sum_probs=162.2
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhccccc-ccccCCCCCCCCCcCccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLRR 691 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~-~~~~~~~d~~l~l~ql~R 691 (964)
+..|+++|... ..+..++.+++.++.....+..|.+++|.++ .+.+..+.+|+++... ... ....
T Consensus 25 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----------~~~~ 91 (223)
T 2f8y_A 25 GETALHLAARY--SRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA-----------RMHD 91 (223)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTC-----------CCTT
T ss_pred CCchHHHHHHc--CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-----------CCCC
Confidence 47788887654 7788899999988876655678899999999 4788888999887631 111 1123
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..++.++++.|++..++.+ ..+..|.||||+|+..|+.++|++|+++ |+
T Consensus 92 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 149 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLEDLINSHADVN---------AVDDLGKSALHWAAAVNNVDAAVVLLKN-------GA------ 149 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTT---------CBCTTSCBHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred CCcHHHHHHHhCcHHHHHHHHHcCCCCc---------CcCCCCCcHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 4789999999999999999999654321 1245688999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+||.+++++|.
T Consensus 150 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 211 (223)
T 2f8y_A 150 -----------NKDMQNNREETPLFLAAR-EGSYETAKVLLDH------FANRDITDHMDRLPRDIAQERMHHDIVRLLD 211 (223)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCcCCCCcCHHHHHHH-cCCHHHHHHHHHc------CCCCccccccCCCHHHHHHHhcchHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcCC
Q 002122 852 KKINKRP 858 (964)
Q Consensus 852 ~k~ak~~ 858 (964)
++++...
T Consensus 212 ~~g~~~~ 218 (223)
T 2f8y_A 212 EYNLVRS 218 (223)
T ss_dssp HTTCSSC
T ss_pred HcCCCcc
Confidence 9988654
No 8
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.86 E-value=4.1e-21 Score=192.41 Aligned_cols=195 Identities=18% Similarity=0.105 Sum_probs=158.3
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchh-hhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDAD-VERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~~-~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
.+|++.|... +.+..++.+++.+..... .+..|.+++|.++ .+.+..+.||++++...... .......
T Consensus 3 ~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--------~~~~~~g 72 (228)
T 2dzn_A 3 NYPLHQACME--NEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD--------DYPDDSG 72 (228)
T ss_dssp CCHHHHHHHT--TCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGG--------GCCCTTS
T ss_pred ccHHHHHHHh--CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc--------ccCCCCC
Confidence 4577776554 778888888888765543 4567899999999 48888899998887321111 1122235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.++++.|++......++ ..+..|.||||+|++.++.+++++|+++ |+
T Consensus 73 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 131 (228)
T 2dzn_A 73 WTPFHIACSVGNLEVVKSLYDRPLKPDLN-------KITNQGVTCLHLAVGKKWFEVSQFLIEN-------GA------- 131 (228)
T ss_dssp CCHHHHHHHHCCHHHHHHHHSSSSCCCTT-------CCCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCcccc-------cCCcCCCCHHHHHHHcCCHhHHHHHHHc-------CC-------
Confidence 78999999999999999999964211111 1245688999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccc-cccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIE-AWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~g-AdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
+++.++..|.||||+|+. .|+.+++++|+++ + ++++.+|..|.||||+|+..|+.+++++|.
T Consensus 132 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 132 ----------SVRIKDKFNQIPLHRAAS-VGSLKLIELLCGL------GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp ----------CSCCCCTTSCCHHHHHHH-TTCHHHHHHHHTT------TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ----------CccccCCCCCCHHHHHHH-cCCHHHHHHHHhc------CcccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 889999999999999999 9999999999999 8 999999999999999999999999999999
Q ss_pred -HhhhcC
Q 002122 852 -KKINKR 857 (964)
Q Consensus 852 -~k~ak~ 857 (964)
+++++.
T Consensus 195 ~~~ga~~ 201 (228)
T 2dzn_A 195 EKYGAEY 201 (228)
T ss_dssp HHHCCCS
T ss_pred HhcCCCC
Confidence 777654
No 9
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.86 E-value=4.2e-21 Score=193.54 Aligned_cols=195 Identities=19% Similarity=0.167 Sum_probs=158.2
Q ss_pred CCcceeecchhhhhHHHHHHHHhh----hcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcC
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALE----FNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFP 688 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le----~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~q 688 (964)
+..|+++|... +.+..++.+++ .+......+..|.+++|.++ .+.+..+.||++++......+
T Consensus 9 g~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~---------- 76 (241)
T 1k1a_A 9 GDTPLHIAVVQ--GNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALD---------- 76 (241)
T ss_dssp TCCHHHHHHHT--TCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC----------
T ss_pred CCcHHHHHHHc--CCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccC----------
Confidence 46788887755 56666666665 45544444567899999999 488888899998774322222
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 689 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 689 l~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
....++||+|+..++.++++.|++......++... .+..|.||||+|++.|+.+++++|+++ |+
T Consensus 77 -~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-----~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~--- 140 (241)
T 1k1a_A 77 -RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEA-----RNYDGLTALHVAVNTECQETVQLLLER-------GA--- 140 (241)
T ss_dssp -TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTC-----CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC---
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccc-----cCcCCCcHHHHHHHcCCHHHHHHHHHc-------CC---
Confidence 23478999999999999999999976533222221 345688999999999999999999999 76
Q ss_pred ccccccccccccccCCCcCC-CCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 847 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d-~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv 847 (964)
+++..+ ..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++
T Consensus 141 --------------~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v 199 (241)
T 1k1a_A 141 --------------DIDAVDIKSGRSPLIHAVE-NNSLSMVQLLLQH------GANVNAQMYSGSSALHSASGRGLLPLV 199 (241)
T ss_dssp --------------CTTCCCTTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCBCTTSCBHHHHHHHHTCHHHH
T ss_pred --------------CcccccccCCCcHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 778877 789999999999 9999999999999 999999999999999999999999999
Q ss_pred HHHHHhhhcC
Q 002122 848 HLVQKKINKR 857 (964)
Q Consensus 848 ~LL~~k~ak~ 857 (964)
++|.+++++.
T Consensus 200 ~~Ll~~ga~~ 209 (241)
T 1k1a_A 200 RTLVRSGADS 209 (241)
T ss_dssp HHHHHTTCCT
T ss_pred HHHHhcCCCC
Confidence 9999988764
No 10
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.86 E-value=2.1e-21 Score=201.68 Aligned_cols=201 Identities=11% Similarity=0.012 Sum_probs=166.1
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.+| .+.+..+.+|++++......+ ...
T Consensus 3 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g 69 (261)
T 2xai_A 3 DWSPMHEAAIH--GHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT-----------ADW 69 (261)
T ss_dssp -CCHHHHHHHH--TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------TTS
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------CCC
Confidence 46788887655 7888899999988776655678999999999 588888899998874322222 235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.++|+.|++.+++.. ....|.||||+|++.|+.++|++|+++ |+
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------- 125 (261)
T 2xai_A 70 HTPLFNACVSGSWDCVNLLLQHGASVQ----------PESDLASPIHEAARRGHVECVNSLIAY-------GG------- 125 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSS----------CSCTTCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCC----------CCCCCCCHHHHHHHcCcHHHHHHHHHc-------CC-------
Confidence 789999999999999999999654322 123488999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..+..|.||||+|+. .|+.+++++|+++ |+++|. |..|.||||+|+..|+.+++++|.+
T Consensus 126 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~ 187 (261)
T 2xai_A 126 ----------NIDHKISHLGTPLYLACE-NQQRACVKKLLES------GADVNQ-GKGQDSPLHAVARTASEELACLLMD 187 (261)
T ss_dssp ----------CTTCCBTTTBCHHHHHHH-TTCHHHHHHHHHH------TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHH
T ss_pred ----------CCCcCCCCCCCHHHHHHH-hCCHHHHHHHHHc------CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHH
Confidence 889999999999999999 9999999999999 999996 8999999999999999999999999
Q ss_pred hhhcCC---CCCCceeecCC
Q 002122 853 KINKRP---NGGHVVVDICG 869 (964)
Q Consensus 853 k~ak~~---~~~~v~v~ip~ 869 (964)
++++.. ..+.+.+++..
T Consensus 188 ~gad~~~~d~~g~tpl~~A~ 207 (261)
T 2xai_A 188 FGADTQAKNAEGKRPVELVP 207 (261)
T ss_dssp TTCCTTCCCTTSCCGGGGSC
T ss_pred cCCCCCCcCCCCCChhhhcc
Confidence 987643 24455555543
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.86 E-value=1.8e-21 Score=200.91 Aligned_cols=189 Identities=17% Similarity=0.128 Sum_probs=158.1
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhccccc-ccccCCCCCCCCCcCcc
Q 002122 613 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLR 690 (964)
Q Consensus 613 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~-~~~~~~~d~~l~l~ql~ 690 (964)
.+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.+|+++... ... ...
T Consensus 56 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----------~~~ 122 (253)
T 1yyh_A 56 TGETALHLAARY--SRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA-----------RMH 122 (253)
T ss_dssp TSCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTC-----------CCT
T ss_pred CCCcHHHHHHHc--CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-----------cCC
Confidence 347899887754 6778889999988876656678899999999 5788888888887631 111 112
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..++.++++.||+.+++.+ ..+..|.||||+|++.|+.++|++||++ |+
T Consensus 123 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga----- 181 (253)
T 1yyh_A 123 DGTTPLILAARLAVEGMLEDLINSHADVN---------AVDDLGKSALHWAAAVNNVDAAVVLLKN-------GA----- 181 (253)
T ss_dssp TCCCHHHHHHHHTCSSHHHHHHHTTCCTT---------CBCTTSCBHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred CCCcHHHHHHHcChHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 35789999999999999999999654321 1245689999999999999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|.+|..|.||||+|+. .|+.+++++|+++ ||+++.+|..|.||||+|+.+||.+++++|
T Consensus 182 ------------~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l 242 (253)
T 1yyh_A 182 ------------NKDMQNNREETPLFLAAR-EGSYETAKVLLDH------FANRDITDHMDRLPRDIAQERMHHDIVRLL 242 (253)
T ss_dssp ------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCCcCCCCCCHHHHHHH-CCCHHHHHHHHHc------CCCccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 889999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHhh
Q 002122 851 QKKI 854 (964)
Q Consensus 851 ~~k~ 854 (964)
....
T Consensus 243 ~~~~ 246 (253)
T 1yyh_A 243 DLEH 246 (253)
T ss_dssp HC--
T ss_pred HHHh
Confidence 8654
No 12
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.86 E-value=2.4e-21 Score=190.86 Aligned_cols=188 Identities=17% Similarity=0.118 Sum_probs=152.8
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcC-cchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNR-TDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a-~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
..|++.|... +.+..++.++..+. .....+..|.+++|.++ .+.+..+.+|++++......+ ...
T Consensus 6 ~~~L~~A~~~--g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~~g 72 (201)
T 3hra_A 6 VGALLEAANQ--RDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQN-----------SIS 72 (201)
T ss_dssp TTHHHHHHHT--TCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------TTS
T ss_pred ccHHHHHHHh--ccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----------CCC
Confidence 5566665544 77888888887766 33333567899999999 588889999998875322222 234
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc-cCccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR-LGSENKA 771 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dG-a~~~~~~ 771 (964)
.++||+|+..++.++++.|++... .+.. ..+..|.||||+|++.|+.++|++||+. | +
T Consensus 73 ~t~l~~A~~~~~~~~~~~Ll~~~~---~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~------ 131 (201)
T 3hra_A 73 DSPYLYAGAQGRTEILAYMLKHAT---PDLN-----KHNRYGGNALIPAAEKGHIDNVKLLLED-------GRE------ 131 (201)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSC---CCTT-----CCCTTSCCSHHHHHHTTCHHHHHHHHHH-------CCC------
T ss_pred CCHHHHHHHcCCHHHHHHHHhccC---cccc-----cccCCCCcHHHHHHHcCCHHHHHHHHHc-------CCC------
Confidence 789999999999999999996321 1111 1345688999999999999999999999 5 4
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCC-----HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS-----EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 846 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~-----~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~sv 846 (964)
++|..|..|.||||+|+. .+. .+++++|+++ |++++.+|..|.||||+|+.+|+.++
T Consensus 132 -----------~~~~~~~~g~t~L~~A~~-~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~ 193 (201)
T 3hra_A 132 -----------DIDFQNDFGYTALIEAVG-LREGNQLYQDIVKLLMEN------GADQSIKDNSGRTAMDYANQKGYTEI 193 (201)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-SSCCSHHHHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred -----------CcCCCCCCCCCHHHHHHH-hccchhhHHHHHHHHHHC------CCCCCccCCCCCCHHHHHHHcCCHhH
Confidence 789999999999999999 777 9999999999 99999999999999999999999999
Q ss_pred HHHHHHhh
Q 002122 847 IHLVQKKI 854 (964)
Q Consensus 847 v~LL~~k~ 854 (964)
+++|.+++
T Consensus 194 ~~~Ll~~G 201 (201)
T 3hra_A 194 SKILAQYN 201 (201)
T ss_dssp HHHHHTCC
T ss_pred HHHHHhcC
Confidence 99998753
No 13
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.86 E-value=5.5e-21 Score=193.04 Aligned_cols=193 Identities=14% Similarity=0.078 Sum_probs=161.5
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccc
Q 002122 613 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 691 (964)
Q Consensus 613 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R 691 (964)
++..|+++|... +.+..++.+++.+......+..|.+++|.++ -+.+..+.||++++......+ ..
T Consensus 10 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~~ 76 (237)
T 3b7b_A 10 NKRSPLHAAAEA--GHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKD-----------AE 76 (237)
T ss_dssp CSCCHHHHHHHH--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCC-----------TT
T ss_pred CCCCHHHHHHHc--CcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCC-----------CC
Confidence 347788887654 7788889999988876655678899999999 488888899998775322221 23
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..|+.+++++|++... .+. ...+..|.||||+|++.++.+++++|+++ |+
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~---~~~-----~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------ 135 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQ---MDV-----NCQDDGGWTPMIWATEYKHVDLVKLLLSK-------GS------ 135 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTC---CCT-----TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCC---CCc-----ccCCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC------
Confidence 4689999999999999999998541 111 11345688999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
+++..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 136 -----------~~~~~~~~g~t~L~~A~~-~~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 197 (237)
T 3b7b_A 136 -----------DINIRDNEENICLHWAAF-SGCVDIAEILLAA------KCDLHAVNIHGDSPLHIAARENRYDCVVLFL 197 (237)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-HCCHHHHHHHHTT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCccCCCCCCHHHHHHH-CCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHH
Confidence 789999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 002122 852 KKINKR 857 (964)
Q Consensus 852 ~k~ak~ 857 (964)
+++++.
T Consensus 198 ~~gad~ 203 (237)
T 3b7b_A 198 SRDSDV 203 (237)
T ss_dssp TTTCCT
T ss_pred HcCCCC
Confidence 988764
No 14
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.86 E-value=2.2e-21 Score=195.27 Aligned_cols=190 Identities=15% Similarity=0.080 Sum_probs=123.9
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcch-hhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDA-DVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~-~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
-.|++.|.. .+.+..++.+++...... ..+..|.+++|.++ .+.+..+.||++++......+ ...
T Consensus 7 ~~~l~~A~~--~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g 73 (231)
T 3aji_A 7 NIMICNLAY--SGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD-----------DAG 73 (231)
T ss_dssp SSHHHHHHH--HTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-----------TTS
T ss_pred cchHHHHHH--hCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcC-----------CCC
Confidence 445444433 366666766666544322 22456677777777 466667777777654322221 123
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..++.++++.|++..++.+. .+..|.||||+|++.++.+++++|++. |+
T Consensus 74 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 130 (231)
T 3aji_A 74 WSPLHIAASAGXDEIVKALLVKGAHVNA---------VNQNGCTPLHYAASKNRHEIAVMLLEG-------GA------- 130 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CCHHHHHHHcCHHHHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 5677777777777777777775433111 233466777777777777777777777 55
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
+++..+..|.||||+|+. .|+.+++++|+++ +++++.+|..|.||||+|+..|+.+++++|.+
T Consensus 131 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 193 (231)
T 3aji_A 131 ----------NPDAKDHYDATAMHRAAA-KGNLKMVHILLFY------KASTNIQDTEGNTPLHLACDEERVEEAKFLVT 193 (231)
T ss_dssp ----------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CCCCcCCCCCcHHHHHHH-cCCHHHHHHHHhc------CCCccccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 666777777777777777 7777777777777 77777777777777777777777777777777
Q ss_pred hhhcC
Q 002122 853 KINKR 857 (964)
Q Consensus 853 k~ak~ 857 (964)
++++.
T Consensus 194 ~ga~~ 198 (231)
T 3aji_A 194 QGASI 198 (231)
T ss_dssp TTCCS
T ss_pred CCCCC
Confidence 76653
No 15
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.86 E-value=2e-21 Score=200.51 Aligned_cols=195 Identities=14% Similarity=0.098 Sum_probs=139.6
Q ss_pred CCcceeecchhh-----------hhHHHHHHHHhhhcCcchhh-hhcCccccHHHH-HHHHHHHhhhhcccccccccCCC
Q 002122 614 TFFPFIVAEEDV-----------CSEIRMLESALEFNRTDADV-ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHL 680 (964)
Q Consensus 614 ~ffP~LVad~~i-----------CsEI~~LE~~le~~a~~~~~-~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~ 680 (964)
+..|+++|...- -..+..++.+++.+...... +..|.+++|.+| .+.+..+.+|++++......+
T Consensus 10 g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-- 87 (253)
T 1yyh_A 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD-- 87 (253)
T ss_dssp ------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--
T ss_pred CCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC--
Confidence 477777765421 23677788888877765433 567899999999 588888999998874322221
Q ss_pred CCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCc
Q 002122 681 DPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLE 760 (964)
Q Consensus 681 d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~ 760 (964)
....++||+|+..++.+++++|++.... + ....+..|.||||+|++.|+.++|++||++
T Consensus 88 ---------~~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---- 146 (253)
T 1yyh_A 88 ---------NMGRTPLHAAVSADAQGVFQILIRNRAT---D-----LDARMHDGTTPLILAARLAVEGMLEDLINS---- 146 (253)
T ss_dssp ---------TTSCCHHHHHHHHTCHHHHHHHHHSTTS---C-----TTCCCTTCCCHHHHHHHHTCSSHHHHHHHT----
T ss_pred ---------CCCCCHHHHHHHcCCHHHHHHHHHcCCC---C-----ccccCCCCCcHHHHHHHcChHHHHHHHHHc----
Confidence 2357899999999999999999985421 1 111345688999999999999999999999
Q ss_pred cccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHH
Q 002122 761 VSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARL 840 (964)
Q Consensus 761 ~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~ 840 (964)
|+ ++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.
T Consensus 147 ---g~-----------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 147 ---HA-----------------DVNAVDDLGKSALHWAAA-VNNVDAAVVLLKN------GANKDMQNNREETPLFLAAR 199 (253)
T ss_dssp ---TC-----------------CTTCBCTTSCBHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHH
T ss_pred ---CC-----------------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHH
Confidence 77 889999999999999999 9999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHHhhhcCC
Q 002122 841 RGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 841 rGh~svv~LL~~k~ak~~ 858 (964)
.|+.+++++|.+++++..
T Consensus 200 ~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 200 EGSYETAKVLLDHFANRD 217 (253)
T ss_dssp HTCHHHHHHHHHTTCCTT
T ss_pred CCCHHHHHHHHHcCCCcc
Confidence 999999999999987643
No 16
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.86 E-value=8.4e-21 Score=190.99 Aligned_cols=191 Identities=14% Similarity=0.106 Sum_probs=160.2
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccc
Q 002122 613 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 691 (964)
Q Consensus 613 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R 691 (964)
.+..|+++|... +.+..++.+++.+......+..|.+++|.++ .+.+..+.||++++......+ ..
T Consensus 39 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~~ 105 (231)
T 3aji_A 39 DSRTALHWACSA--GHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVN-----------QN 105 (231)
T ss_dssp TSCCHHHHHHHH--TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------TT
T ss_pred CCCCHHHHHHHc--CcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCC-----------CC
Confidence 347788887654 6788888999888766655677899999998 577888889988774322221 23
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..++.+++++|++...+.+ ..+..|.||||+|+..|+.++|++|+++ |+
T Consensus 106 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 163 (231)
T 3aji_A 106 GCTPLHYAASKNRHEIAVMLLEGGANPD---------AKDHYDATAMHRAAAKGNLKMVHILLFY-------KA------ 163 (231)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCcHHHHHHHcCCHHHHHHHHhc-------CC------
Confidence 4789999999999999999998654321 1244588999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|.+|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..++.+++++|.
T Consensus 164 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~ 225 (231)
T 3aji_A 164 -----------STNIQDTEGNTPLHLACD-EERVEEAKFLVTQ------GASIYIENKEEKTPLQVAKGGLGLILKRLAE 225 (231)
T ss_dssp -----------CSCCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCTTSCCHHHHSCHHHHHHHHHHHH
T ss_pred -----------CccccCCCCCCHHHHHHH-CCCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHhhHHHHHHHHHc
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred Hhhhc
Q 002122 852 KKINK 856 (964)
Q Consensus 852 ~k~ak 856 (964)
++++.
T Consensus 226 ~~~a~ 230 (231)
T 3aji_A 226 GEEAS 230 (231)
T ss_dssp HHHHC
T ss_pred ccccc
Confidence 98764
No 17
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.85 E-value=6.6e-21 Score=183.61 Aligned_cols=159 Identities=18% Similarity=0.102 Sum_probs=135.7
Q ss_pred CccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
|.+++|.+| .+.+..+.++++.+......+ ....++||+|+..|+.++++.|++..++.+.
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 64 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTD-----------EEGFTPLMWAAAHGQIAVVEFLLQNGADPQL------- 64 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCC-----------CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-------
Confidence 567888888 578888888888764322222 2347899999999999999999996543211
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHH
Q 002122 728 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 807 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dV 807 (964)
.+..|.||||+|+..|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+.++
T Consensus 65 --~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~ 117 (167)
T 3v31_A 65 --LGKGRESALSLACSKGYTDIVKMLLDC-------GV-----------------DVNEYDWNGGTPLLYAVH-GNHVKC 117 (167)
T ss_dssp --CCTTCCCHHHHHHHHTCHHHHHHHHHH-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHH
T ss_pred --cCCCCCcHHHHHHHcCCHHHHHHHHHC-------CC-----------------CCCcCCCCCCCHHHHHHH-cCCHHH
Confidence 245688999999999999999999999 77 889999999999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 808 LDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 808 V~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++|+++ |++++.+|..|.||||+|+..|+.+++++|.+++.+..
T Consensus 118 v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 118 VKMLLES------GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp HHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHc------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 9999999 99999999999999999999999999999999987654
No 18
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.85 E-value=9.5e-21 Score=183.36 Aligned_cols=158 Identities=19% Similarity=0.130 Sum_probs=134.7
Q ss_pred ccccHHHH-HHHHHHHhhhhccccc-ccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 650 KIDTKNQA-MDFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 650 ~~~~h~~a-l~fL~EIGWLLqr~~~-~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
.+++|.+| .+.+..+.+++..... ....+ ....++||+|+..|+.++|++||+.+++.+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 64 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPD-----------ERGFTPLIWASAFGEIETVRFLLEWGADPHI------- 64 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-------
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCC-----------CCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-------
Confidence 46788888 5888888888887642 11111 2357899999999999999999997553221
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHH
Q 002122 728 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 807 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dV 807 (964)
.+..|.||||+|+..|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+.++
T Consensus 65 --~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~ 117 (172)
T 3v30_A 65 --LAKERESALSLASTGGYTDIVGLLLER-------DV-----------------DINIYDWNGGTPLLYAVR-GNHVKC 117 (172)
T ss_dssp --CCTTCCCHHHHHHHTTCHHHHHHHHTT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHH
T ss_pred --hcccCCCHHHHHHHCCCHHHHHHHHHc-------CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHH
Confidence 244688999999999999999999999 77 889999999999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 808 LDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 808 V~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++|+++ |++++.+|..|.||||+|+..|+.+++++|.+++++..
T Consensus 118 v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 118 VEALLAR------GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF 162 (172)
T ss_dssp HHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHc------CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 9999999 99999999999999999999999999999999988754
No 19
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.85 E-value=1.4e-20 Score=198.74 Aligned_cols=200 Identities=20% Similarity=0.189 Sum_probs=164.8
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.||++++......+ ...
T Consensus 58 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-----------~~g 124 (351)
T 3utm_A 58 KSTPLHLAAGY--NRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMD-----------LWQ 124 (351)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTC
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCC-----------CCC
Confidence 47899988765 7788899999998877666678999999999 488889999998874322222 234
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCccc-CCCCC--------------------------------------------c
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVS-LGEHP--------------------------------------------S 727 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd-~g~~~--------------------------------------------~ 727 (964)
.++||+|+..|+.+++++||+.+++.... ..... .
T Consensus 125 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 204 (351)
T 3utm_A 125 FTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN 204 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccc
Confidence 68999999999999999999987654321 10000 0
Q ss_pred hhhccCCCcHHHHHHHc---CCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC
Q 002122 728 LDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 804 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~---g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~ 804 (964)
...+..|.||||+|+.. +..+++++|++. |+ ++|.++..|.||||+|+. .|+
T Consensus 205 ~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~g~ 259 (351)
T 3utm_A 205 FKQPQSHETALHCAVASLHPKRKQVAELLLRK-------GA-----------------NVNEKNKDFMTPLHVAAE-RAH 259 (351)
T ss_dssp CCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHT-------TC-----------------CTTCCCTTCCCHHHHHHH-TTC
T ss_pred ccCCCCCCCHHHHHHHHhCccHHHHHHHHHHc-------CC-----------------CcCCcCCCCCCHHHHHHH-cCC
Confidence 01234578999999999 568999999999 77 889999999999999999 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 805 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 805 ~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
.++|++|+++ |+++|.+|..|.||||+|+.+||.+++++|.+++++.
T Consensus 260 ~~~v~~Ll~~------ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 306 (351)
T 3utm_A 260 NDVMEVLHKH------GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDP 306 (351)
T ss_dssp HHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 9999999999 9999999999999999999999999999999998764
No 20
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.85 E-value=1e-21 Score=199.60 Aligned_cols=197 Identities=13% Similarity=-0.009 Sum_probs=151.9
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcC----cchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcC
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNR----TDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFP 688 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a----~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~q 688 (964)
+..|+++|... +.+..++.+++.+. .....+..|.+++|.++ .+.+..+.+|++++......+
T Consensus 8 g~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~---------- 75 (236)
T 1ikn_D 8 GDSFLHLAIIH--EEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRD---------- 75 (236)
T ss_dssp CCCTTHHHHHT--TCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCC----------
T ss_pred CCchhHHHHHc--CChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC----------
Confidence 35666666533 33334444444333 22223456899999999 588888999998874322222
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 689 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 689 l~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
....++||+|+..|+.++++.|++...+.... . .....+..|.||||+|+..|+.++|++||++ |+
T Consensus 76 -~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~--- 141 (236)
T 1ikn_D 76 -FRGNTPLHLACEQGCLASVGVLTQSCTTPHLH--S-ILKATNYNGHTCLHLASIHGYLGIVELLVSL-------GA--- 141 (236)
T ss_dssp -TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSS--C-GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-------TC---
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHhcccchhHH--H-HhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC---
Confidence 23578999999999999999999965432110 0 0111345689999999999999999999999 77
Q ss_pred ccccccccccccccCCCcCCC-CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 847 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~-~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv 847 (964)
++|..+. .|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+.+|+.+++
T Consensus 142 --------------~~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~ 200 (236)
T 1ikn_D 142 --------------DVNAQEPCNGRTALHLAVD-LQNPDLVSLLLKC------GADVNRVTYQGYSPYQLTWGRPSTRIQ 200 (236)
T ss_dssp --------------CTTCCCTTTCCCHHHHHHH-TTCHHHHHHHHTT------TCCSCCCCTTCCCGGGGCTTSSCHHHH
T ss_pred --------------CCCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCcccCCCCCHHHHHHccCchHHH
Confidence 8888887 99999999999 9999999999999 999999999999999999999999999
Q ss_pred HHHHHhhhcC
Q 002122 848 HLVQKKINKR 857 (964)
Q Consensus 848 ~LL~~k~ak~ 857 (964)
++|.+++++.
T Consensus 201 ~~Ll~~ga~~ 210 (236)
T 1ikn_D 201 QQLGQLTLEN 210 (236)
T ss_dssp HHHHTTSCGG
T ss_pred HHHHHcchhh
Confidence 9999998754
No 21
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.85 E-value=4.4e-21 Score=207.41 Aligned_cols=131 Identities=16% Similarity=0.097 Sum_probs=111.1
Q ss_pred ccchHHHHHHHcC--chHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 691 RFKWLIEFSMDHE--WCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 691 R~k~lL~fAve~g--~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
...++||+|+..| +.++|++||+.+++.+. .+..|.||||+|+..|+.++|++||++ |+.
T Consensus 137 ~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~---------~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~~-- 198 (364)
T 3ljn_A 137 KGQTALHWCVGLGPEYLEMIKILVQLGASPTA---------KDKADETPLMRAMEFRNREALDLMMDT-------VPS-- 198 (364)
T ss_dssp SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHH-------CSC--
T ss_pred CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc---------cCCCCCCHHHHHHHcCCHHHHHHHHhc-------ccc--
Confidence 3567899999988 88999999886543221 245688999999999999999999998 551
Q ss_pred ccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIH 848 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~ 848 (964)
....++|..|..|.||||+||. .|+.++|++|+++ ||++|.+|..|.||||+|+..||.++++
T Consensus 199 ----------~~~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~g~~~~v~ 261 (364)
T 3ljn_A 199 ----------KSSLRLDYANKQGNSHLHWAIL-INWEDVAMRFVEM------GIDVNMEDNEHTVPLYLSVRAAMVLLTK 261 (364)
T ss_dssp ----------SSSCCTTCCCTTCCCTTHHHHT-TTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTCCHHHHH
T ss_pred ----------cccccccccCCCCCcHHHHHHH-cCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHhChHHHHH
Confidence 0111488999999999999999 9999999999999 9999999999999999999999999999
Q ss_pred HHHHhhhc
Q 002122 849 LVQKKINK 856 (964)
Q Consensus 849 LL~~k~ak 856 (964)
+|.+++++
T Consensus 262 ~Ll~~~~~ 269 (364)
T 3ljn_A 262 ELLQKTDV 269 (364)
T ss_dssp HHHHHSCH
T ss_pred HHHHcCCc
Confidence 99998754
No 22
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.85 E-value=7.3e-21 Score=201.19 Aligned_cols=202 Identities=16% Similarity=0.110 Sum_probs=140.6
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcch--------hhhhcCccccHHHH-HHHH-HHHhhhhcccccccccCCCCCCC
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDA--------DVERFGKIDTKNQA-MDFI-HEIGWLFHRSQSKSRLGHLDPNT 684 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~--------~~~e~g~~~~h~~a-l~fL-~EIGWLLqr~~~~~~~~~~d~~l 684 (964)
..|++.|... +.+..++.+++.++.+. ..+..+.++++.++ .+.. ..+..|+..+......+
T Consensus 12 ~~~L~~A~~~--G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d------ 83 (269)
T 4b93_B 12 VEKLLRAVAD--GDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTS------ 83 (269)
T ss_dssp HHHHHHHHHT--TCHHHHHHHHTCC----------------------------------------CCCCTTCCC------
T ss_pred hhHHHHHHHc--CCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcC------
Confidence 3455655443 77888888888776432 11234667777776 3333 34566666664322221
Q ss_pred CCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc
Q 002122 685 DLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR 764 (964)
Q Consensus 685 ~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dG 764 (964)
....+|||+|+..|+.++|++||+..++.. ..+..|.||||.|+..++.+++++||++ |
T Consensus 84 -----~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~---------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-------g 142 (269)
T 4b93_B 84 -----QDGSSPLHVAALHGRADLIPLLLKHGANAG---------ARNADQAVPLHLACQQGHFQVVKCLLDS-------N 142 (269)
T ss_dssp -----TTSCCHHHHHHHTTCTTHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHHTCHHHHHHHHHT-------T
T ss_pred -----CCCCCHHHHHHHcCcHHHHHHHHhcCCCcC---------ccCCCCCCccccccccChHHHHHHHHHC-------C
Confidence 235789999999999999999999654321 1345688999999999999999999999 7
Q ss_pred cCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCH
Q 002122 765 LGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHY 844 (964)
Q Consensus 765 a~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~ 844 (964)
+ ++|.+|..|+||||+||. .|+.++|++|+++ ||++|.+|..|.||||+|+.+||.
T Consensus 143 ~-----------------~~n~~d~~g~TpL~~A~~-~g~~~~v~~Ll~~------gadvn~~~~~g~t~Lh~A~~~g~~ 198 (269)
T 4b93_B 143 A-----------------KPNKKDLSGNTPLIYACS-GGHHELVALLLQH------GASINASNNKGNTALHEAVIEKHV 198 (269)
T ss_dssp C-----------------CSCCCCTTCCCHHHHHHH-TTCGGGHHHHHHT------TCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred C-----------------CCCCCCCCCCCHHHHHHH-CCCHHHHHHHHHC------CCCCCccccCCCcHHHHHHHcCCH
Confidence 7 899999999999999999 9999999999999 999999999999999999999999
Q ss_pred HHHHHHHHhhhcCC---CCCCceeecCC
Q 002122 845 SYIHLVQKKINKRP---NGGHVVVDICG 869 (964)
Q Consensus 845 svv~LL~~k~ak~~---~~~~v~v~ip~ 869 (964)
+++++|.+++++.. ..+.+.++++.
T Consensus 199 ~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 226 (269)
T 4b93_B 199 FVVELLLLHGASVQVLNKRQRTAVDCAE 226 (269)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCSGGGSC
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 99999999987643 24556666653
No 23
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.84 E-value=8.5e-21 Score=181.17 Aligned_cols=155 Identities=19% Similarity=0.192 Sum_probs=129.8
Q ss_pred ccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCch
Q 002122 650 KIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSL 728 (964)
Q Consensus 650 ~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~l 728 (964)
.++++.++ .+.+..+.+|++++......+ ....++||+|+. ++.+++++|++..++.+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-----------~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~--------- 64 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNVNAQN-----------GFGRTALQVMKL-GNPEIARRLLLRGANPD--------- 64 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTTCCC-----------TTSCCHHHHCCS-SCHHHHHHHHHTTCCTT---------
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCccccC-----------ccCccHHHHHHc-CcHHHHHHHHHcCCCCC---------
Confidence 45677777 588888889987764222211 235789999999 99999999999654321
Q ss_pred hhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHH
Q 002122 729 DLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVL 808 (964)
Q Consensus 729 e~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV 808 (964)
..+..|.||||+|++.|+.++|++|+++ |+ ++|.+|..|.||||+|+. .|+.+++
T Consensus 65 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v 119 (162)
T 1ihb_A 65 LKDRTGFAVIHDAARAGFLDTLQTLLEF-------QA-----------------DVNIEDNEGNLPLHLAAK-EGHLRVV 119 (162)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHHHH
Confidence 1245688999999999999999999999 77 889999999999999999 9999999
Q ss_pred HHhhcCCCCCccccc-cccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 002122 809 DALTDDPGMVGIEAW-KNARDSSGSTPEDYARLRGHYSYIHLVQKKINK 856 (964)
Q Consensus 809 ~lLL~~p~~vg~gAd-inarD~~G~TPLh~A~~rGh~svv~LL~~k~ak 856 (964)
++|+++ +++ ++.+|..|.||||+|+.+|+.+++++|.+++++
T Consensus 120 ~~Ll~~------g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 120 EFLVKH------TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHH------SCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHc------cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999 887 699999999999999999999999999998864
No 24
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.84 E-value=9.2e-21 Score=187.01 Aligned_cols=158 Identities=16% Similarity=0.139 Sum_probs=134.7
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
+..|.+++|.+| .+.+..+.+|++++......+ ....++||+|+..++.+++++|++..++.+
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----- 95 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKD-----------IEGSTALIWAVKNNRLGIAEKLLSKGSNVN----- 95 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-----
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhcccccccc-----------ccCccHHHHHHHcCCHHHHHHHHHCCCCCC-----
Confidence 346889999998 477777888887764221111 235789999999999999999999754321
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 804 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~ 804 (964)
..+..|.||||+|+..|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+
T Consensus 96 ----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~ 146 (192)
T 2rfm_A 96 ----TKDFSGKTPLMWSIIFGYSEMSYFLLEH-------GA-----------------NVNDRNLEGETPLIVASK-YGR 146 (192)
T ss_dssp ----CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CSSCCCTTCCCHHHHHHH-HTC
T ss_pred ----CCCCCCCcHHHHHHHcCCHHHHHHHHHC-------CC-----------------CCCCCCCCCCCHHHHHHH-cCC
Confidence 1245688999999999999999999999 77 889999999999999999 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 002122 805 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 854 (964)
Q Consensus 805 ~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ 854 (964)
.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.+.+
T Consensus 147 ~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 147 SEIVKKLLEL------GADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHT------TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999 9999999999999999999999999999998875
No 25
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.84 E-value=3.2e-21 Score=198.22 Aligned_cols=209 Identities=14% Similarity=0.020 Sum_probs=149.8
Q ss_pred cceeecchhhhhHHH----HHHHHhhhcCcchh----hhhcCccccHHHHH----HHHHHHhhhhcccccccccCC-CCC
Q 002122 616 FPFIVAEEDVCSEIR----MLESALEFNRTDAD----VERFGKIDTKNQAM----DFIHEIGWLFHRSQSKSRLGH-LDP 682 (964)
Q Consensus 616 fP~LVad~~iCsEI~----~LE~~le~~a~~~~----~~e~g~~~~h~~al----~fL~EIGWLLqr~~~~~~~~~-~d~ 682 (964)
.|++.|... +.+. .|+.+++.+..... .+..|.+++|.+|. +.+..+.+|++++........ .+.
T Consensus 4 t~L~~A~~~--g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 4 DRLFSVVSR--GVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp HHHHHHHHH--TCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred cHHHHHHHc--CCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 455555533 3332 45666666765544 45678999999984 566666666665532111110 000
Q ss_pred CCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC-C---CchhhccCCCcHHHHHHHcCCHHHHHHHhc---
Q 002122 683 NTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE-H---PSLDLALTELGLLHRAVRKNSRPLVDLLLR--- 755 (964)
Q Consensus 683 ~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~-~---~~le~~l~G~TpLH~AVr~g~~e~VelLL~--- 755 (964)
.. ........++||+|+..|+.++|++||+.+++.+..... . .....+..|.||||+|++.|+.++|++||+
T Consensus 82 ~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 82 QC-TDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CC-CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cc-ccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 00 001124678999999999999999999976543321000 0 000001238899999999999999999999
Q ss_pred cCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhh-CCCHH-------HHHHhhcCCCCCcccccc---
Q 002122 756 FVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGK-DGSED-------VLDALTDDPGMVGIEAWK--- 824 (964)
Q Consensus 756 ~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~-~G~~d-------VV~lLL~~p~~vg~gAdi--- 824 (964)
+ |+ ++|.+|..|+||||+|+.. .++.+ ++++|+++ ||++
T Consensus 161 ~-------ga-----------------~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~------ga~~~~~ 210 (256)
T 2etb_A 161 Q-------PA-----------------SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM------GARLCPT 210 (256)
T ss_dssp C-------CC-----------------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH------HHHHSTT
T ss_pred c-------CC-----------------CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc------CCCcccc
Confidence 6 77 8999999999999999973 57777 99999999 9999
Q ss_pred ----ccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 825 ----NARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 825 ----narD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
+.+|..|.||||+|+..||.+++++|.+++.+.
T Consensus 211 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 211 VQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 999999999999999999999999999998753
No 26
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.84 E-value=1.8e-20 Score=198.01 Aligned_cols=202 Identities=12% Similarity=0.015 Sum_probs=165.6
Q ss_pred CCCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcc
Q 002122 612 SSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLR 690 (964)
Q Consensus 612 ss~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~ 690 (964)
.++..|+++|... +.+..++.+++.+......+..|.+++|.+| .+.+..+.||++++......+ .
T Consensus 57 ~~g~t~L~~Aa~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-----------~ 123 (285)
T 3d9h_A 57 VSDWSPMHEAAIH--GHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT-----------A 123 (285)
T ss_dssp CCSCCHHHHHHHT--TCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCC-----------T
T ss_pred ccCCCHHHHHHHc--CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCC-----------C
Confidence 3457899887755 7788899999988766555678999999999 488888899998874322222 2
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..|+.++|+.|++..++.. ....|.||||+|++.|+.++|++|+++ |+
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~----- 181 (285)
T 3d9h_A 124 DWHTPLFNACVSGSWDCVNLLLQHGASVQ----------PESDLASPIHEAARRGHVECVNSLIAY-------GG----- 181 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSS----------CSCTTSCHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHCCCCCC----------CCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC-----
Confidence 35789999999999999999999654321 123488999999999999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|..|..|.||||+|+. .|+.++|++|+++ |++++. |..|.||||+|+..|+.+++++|
T Consensus 182 ------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~-~~~g~t~L~~A~~~~~~~~v~~L 241 (285)
T 3d9h_A 182 ------------NIDHKISHLGTPLYLACE-NQQRACVKKLLES------GADVNQ-GKGQDSPLHAVVRTASEELACLL 241 (285)
T ss_dssp ------------CTTCCBTTTBCHHHHHHH-TTCHHHHHHHHHT------TCCTTC-CBTTBCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCCcCCCCCCHHHHHHH-cCcHHHHHHHHHC------CCCCCC-CCCCCCHHHHHHHcCCHHHHHHH
Confidence 789999999999999999 9999999999999 999995 99999999999999999999999
Q ss_pred HHhhhcCC---CCCCceeecC
Q 002122 851 QKKINKRP---NGGHVVVDIC 868 (964)
Q Consensus 851 ~~k~ak~~---~~~~v~v~ip 868 (964)
.+++++.. ..+.+.+++.
T Consensus 242 l~~gad~~~~d~~g~t~l~~A 262 (285)
T 3d9h_A 242 MDFGADTQAKNAEGKRPVELV 262 (285)
T ss_dssp HHTTCCTTCCCTTSCCGGGGS
T ss_pred HHCCCCCCCcCCCCCCHHHHh
Confidence 99987643 2334444443
No 27
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.84 E-value=3.6e-21 Score=197.91 Aligned_cols=195 Identities=14% Similarity=0.041 Sum_probs=140.7
Q ss_pred HHHHhhhcCcchhhh----hcCccccHHHHH----HHHHHHhhhhcccccccccCC-CCCCCCCcCccccchHHHHHHHc
Q 002122 632 LESALEFNRTDADVE----RFGKIDTKNQAM----DFIHEIGWLFHRSQSKSRLGH-LDPNTDLFPLRRFKWLIEFSMDH 702 (964)
Q Consensus 632 LE~~le~~a~~~~~~----e~g~~~~h~~al----~fL~EIGWLLqr~~~~~~~~~-~d~~l~l~ql~R~k~lL~fAve~ 702 (964)
|+.+++.+......+ ..|.+++|.+++ +.+..+.+|++.+........ .+.... .......++||+|+..
T Consensus 25 l~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~-~~d~~g~t~L~~A~~~ 103 (260)
T 3jxi_A 25 LSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFR-DVYYRGQTALHIAIER 103 (260)
T ss_dssp HHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBC-CSSEESBCHHHHHHHT
T ss_pred HHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccccc-ccccCCCCHHHHHHHc
Confidence 444444666544333 558999998873 555566666665421100000 000000 1112467899999999
Q ss_pred CchHHHHHHhhhhccCcccCC-C----CCchhhccCCCcHHHHHHHcCCHHHHHHHhc---cCCCccccccCcccccccc
Q 002122 703 EWCAVVKKLLHILLDGTVSLG-E----HPSLDLALTELGLLHRAVRKNSRPLVDLLLR---FVPLEVSDRLGSENKALVD 774 (964)
Q Consensus 703 g~~aVVk~LL~~l~d~~vd~g-~----~~~le~~l~G~TpLH~AVr~g~~e~VelLL~---~~p~~~~dGa~~~~~~lv~ 774 (964)
|+.++|++||+.+++.+.... . ......+..|.||||+|+..|+.++|++||+ + |+
T Consensus 104 g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~-------ga--------- 167 (260)
T 3jxi_A 104 RCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK-------QA--------- 167 (260)
T ss_dssp TCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC-------CC---------
T ss_pred CCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc-------CC---------
Confidence 999999999997654332100 0 0000011458999999999999999999999 6 77
Q ss_pred ccccccccCCCcCCCCCChHHHHHHhhCCC---------HHHHHHhhcCCCCCcccccc-------ccCCCCCCCHHHHH
Q 002122 775 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGS---------EDVLDALTDDPGMVGIEAWK-------NARDSSGSTPEDYA 838 (964)
Q Consensus 775 ~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~---------~dVV~lLL~~p~~vg~gAdi-------narD~~G~TPLh~A 838 (964)
++|.+|..|+||||+|+. .|+ .+++++|+++ ||++ +.+|..|.||||+|
T Consensus 168 --------~~~~~d~~g~TpLh~A~~-~~~~~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 168 --------DLRRQDSRGNTVLHALVA-IADNTRENTKFVTKMYDLLLIK------CAKLFPDTNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp --------CTTCCCTTSCCHHHHHHH-HCCSSHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred --------CCcccCCCCCcHHHHHHH-hccCchhHHHHHHHHHHHHHHh------CcccccccchhhcccCCCCCHHHHH
Confidence 899999999999999998 666 6999999999 9999 78999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcCC
Q 002122 839 RLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 839 ~~rGh~svv~LL~~k~ak~~ 858 (964)
+..||.+++++|.+++.+..
T Consensus 233 ~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 233 AKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHhCCCcc
Confidence 99999999999999987643
No 28
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.84 E-value=3.6e-20 Score=189.52 Aligned_cols=202 Identities=17% Similarity=0.137 Sum_probs=160.7
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.||++++........... .........
T Consensus 72 g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~-~~~~~~~~g 148 (285)
T 1wdy_A 72 GATPFLLAAIA--GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE-DQERLRKGG 148 (285)
T ss_dssp CCCHHHHHHHH--TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCH-HHHHTTCCC
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHH-HHHhhccCC
Confidence 46788877654 6677888888888776655667889999998 4778888888887643222111000 000002235
Q ss_pred chHHHHHHHcCchHHHHHHhhh-hccCcccCCCCCchhhccCCCcHHHHHHHcCC----HHHHHHHhccCCCccccccCc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHI-LLDGTVSLGEHPSLDLALTELGLLHRAVRKNS----RPLVDLLLRFVPLEVSDRLGS 767 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~-l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~----~e~VelLL~~~p~~~~dGa~~ 767 (964)
.++||+|+..++.++++.|++. .++ .. ..+..|.||||+|+..++ .+++++|+++ |+
T Consensus 149 ~t~L~~A~~~~~~~~v~~Ll~~~~~~----~~-----~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~-------g~-- 210 (285)
T 1wdy_A 149 ATALMDAAEKGHVEVLKILLDEMGAD----VN-----ACDNMGRNALIHALLSSDDSDVEAITHLLLDH-------GA-- 210 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTSCCC----TT-----CCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT-------TC--
T ss_pred CcHHHHHHHcCCHHHHHHHHHhcCCC----CC-----ccCCCCCCHHHHHHHccccchHHHHHHHHHHc-------CC--
Confidence 6899999999999999999984 322 11 124568899999999999 9999999999 77
Q ss_pred cccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhc-CCCCCccccccccCCCCCCCHHHHHHHcCCHHH
Q 002122 768 ENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD-DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 846 (964)
Q Consensus 768 ~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~-~p~~vg~gAdinarD~~G~TPLh~A~~rGh~sv 846 (964)
++|.++..|.||||+|+. .|+.+++++|++ . +++++.+|..|.||||+|+.+|+.++
T Consensus 211 ---------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~~------g~~~~~~~~~g~t~l~~A~~~~~~~i 268 (285)
T 1wdy_A 211 ---------------DVNVRGERGKTPLILAVE-KKHLGLVQRLLEQE------HIEINDTDSDGKTALLLAVELKLKKI 268 (285)
T ss_dssp ---------------CSSCCCTTSCCHHHHHHH-TTCHHHHHHHHHSS------SCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred ---------------CCCCcCCCCCcHHHHHHH-cCCHHHHHHHHhcc------CCCccccCCCCCcHHHHHHHcCcHHH
Confidence 889999999999999999 999999999999 6 99999999999999999999999999
Q ss_pred HHHHHHhhhcCC
Q 002122 847 IHLVQKKINKRP 858 (964)
Q Consensus 847 v~LL~~k~ak~~ 858 (964)
+++|.+++++..
T Consensus 269 ~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 269 AELLCKRGASTD 280 (285)
T ss_dssp HHHHHHHSSCSC
T ss_pred HHHHHHcCCCCC
Confidence 999999998765
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.84 E-value=1.3e-20 Score=188.63 Aligned_cols=174 Identities=14% Similarity=0.083 Sum_probs=143.2
Q ss_pred HHhhhcCcchhh-hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHH
Q 002122 634 SALEFNRTDADV-ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKL 711 (964)
Q Consensus 634 ~~le~~a~~~~~-~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~L 711 (964)
.+++.+...... +..|.+++|.+| .+.+..+.||++++......+ ....++||+|+..++.++++.|
T Consensus 9 ~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~L 77 (223)
T 2f8y_A 9 DFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD-----------NMGRTPLHAAVSADAQGVFQIL 77 (223)
T ss_dssp TTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcC-----------CCCCCHHHHHHHcCCHHHHHHH
Confidence 344445443322 467899999999 588888999998774322221 2357899999999999999999
Q ss_pred hhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCC
Q 002122 712 LHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAG 791 (964)
Q Consensus 712 L~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G 791 (964)
++.... + ....+..|.||||+|+..++.+++++|+++ |+ ++|..+..|
T Consensus 78 l~~~~~---~-----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~-----------------~~~~~~~~g 125 (223)
T 2f8y_A 78 IRNRAT---D-----LDARMHDGTTPLILAARLAVEGMLEDLINS-------HA-----------------DVNAVDDLG 125 (223)
T ss_dssp HHBTTS---C-----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCBCTTS
T ss_pred HHcCCC---C-----cccCCCCCCcHHHHHHHhCcHHHHHHHHHc-------CC-----------------CCcCcCCCC
Confidence 985321 1 111345688999999999999999999999 77 789999999
Q ss_pred ChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 792 LTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 792 ~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+|+.+++++|.+++++.
T Consensus 126 ~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 126 KSALHWAAA-VNNVDAAVVLLKN------GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 184 (223)
T ss_dssp CBHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CcHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999 9999999999999 9999999999999999999999999999999998754
No 30
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.84 E-value=3.4e-20 Score=180.07 Aligned_cols=155 Identities=19% Similarity=0.114 Sum_probs=130.0
Q ss_pred CccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
+.+.++.+| .+.+..+.||+.++......+ ....++||+|+..|+.++++.|++..++.+
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------- 74 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAED-----------ASGWTPLHLAAFNGHLEIVEVLLKNGADVN-------- 74 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--------
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--------
Confidence 455677777 578888888888764322221 234789999999999999999999654321
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHH
Q 002122 728 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 807 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dV 807 (964)
..+..|.||||+|+..|+.+++++|+++ |+ ++|..|..|.||||+|+. .|+.++
T Consensus 75 -~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~ 128 (169)
T 2y1l_E 75 -AVDHAGMTPLRLAALFGHLEIVEVLLKN-------GA-----------------DVNANDMEGHTPLHLAAM-FGHLEI 128 (169)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHH
T ss_pred -ccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHH
Confidence 1245688999999999999999999999 77 788999999999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 002122 808 LDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 854 (964)
Q Consensus 808 V~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ 854 (964)
+++|+++ |++++.+|..|.||||+|+..|+.+++++|.+.+
T Consensus 129 v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 129 VEVLLKN------GADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHc------CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999 9999999999999999999999999999998753
No 31
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.84 E-value=3.1e-21 Score=194.52 Aligned_cols=194 Identities=17% Similarity=0.097 Sum_probs=154.6
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+....+.||+.+..... .+. .......
T Consensus 46 g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~----~~~---~~~~~~g 116 (241)
T 1k1a_A 46 RQTPLHLAVIT--TLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGT----LDL---EARNYDG 116 (241)
T ss_dssp SCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTS----CCT---TCCCTTS
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc----ccc---cccCcCC
Confidence 47788887654 6778889999988876655678899999998 477888888888764100 000 0112245
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..++.++++.|++.+++... .....|.||||+|++.|+.++|++|+++ |+
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------- 174 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLERGADIDA--------VDIKSGRSPLIHAVENNSLSMVQLLLQH-------GA------- 174 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC--------CCTTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCccc--------ccccCCCcHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 7899999999999999999996543221 1124588999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+|+.++++.|..
T Consensus 175 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~ 237 (241)
T 1k1a_A 175 ----------NVNAQMYSGSSALHSASG-RGLLPLVRTLVRS------GADSSLKNCHNDTPLMVARSRRVIDILRGKAT 237 (241)
T ss_dssp ----------CTTCBCTTSCBHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCTTTTCSSHHHHHHHTC---
T ss_pred ----------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHhc------CCCCCCcCCCCCCHHHHHHhcCcHHHHhhhcc
Confidence 889999999999999999 9999999999999 99999999999999999999999999998877
Q ss_pred hhh
Q 002122 853 KIN 855 (964)
Q Consensus 853 k~a 855 (964)
+.+
T Consensus 238 ~~a 240 (241)
T 1k1a_A 238 RPA 240 (241)
T ss_dssp ---
T ss_pred CCC
Confidence 643
No 32
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.84 E-value=1.1e-20 Score=207.37 Aligned_cols=204 Identities=17% Similarity=0.131 Sum_probs=161.9
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccc
Q 002122 613 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 691 (964)
Q Consensus 613 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R 691 (964)
.+.+|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.+|+.+.......... ...
T Consensus 165 ~g~TpL~~A~~~--g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--------d~~ 234 (373)
T 2fo1_E 165 DENTPLMLAVLA--RRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEEL--------DRN 234 (373)
T ss_dssp TSCCHHHHHHHH--TCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCC--------CTT
T ss_pred CCCCHHHHHHHc--ChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhc--------CCC
Confidence 347899887654 6788899999998877666678899999999 58888899998876211111111 123
Q ss_pred cchHHHHHHHcC---chHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 002122 692 FKWLIEFSMDHE---WCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 768 (964)
Q Consensus 692 ~k~lL~fAve~g---~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~ 768 (964)
..++||+|+..+ +.+++++|++.+++.+..... .....+..|.||||+||+.|+.++|++||+.. |+
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~-~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~------~~--- 304 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA-RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK------GS--- 304 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGG-GTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS------CC---
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccc-ccCcccccCCCHHHHHHHhCCHHHHHHHHHhc------CC---
Confidence 578999999998 899999999987654321100 00113456899999999999999999999872 25
Q ss_pred ccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIH 848 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~ 848 (964)
++|..|..|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+.+||.++++
T Consensus 305 --------------~~n~~d~~g~TpL~~A~~-~g~~~iv~~Ll~~------gad~~~~d~~g~t~l~~A~~~g~~~iv~ 363 (373)
T 2fo1_E 305 --------------NKDKQDEDGKTPIMLAAQ-EGRIEVVMYLIQQ------GASVEAVDATDHTARQLAQANNHHNIVD 363 (373)
T ss_dssp --------------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHT------TCCSSCCCSSSCCHHHHHHHTTCHHHHH
T ss_pred --------------CccCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCccCCCCCCCCHHHHHHHcCCHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999
Q ss_pred HHHHhhhcC
Q 002122 849 LVQKKINKR 857 (964)
Q Consensus 849 LL~~k~ak~ 857 (964)
+|.++.+++
T Consensus 364 ~Ll~~~a~~ 372 (373)
T 2fo1_E 364 IFDRCRPER 372 (373)
T ss_dssp HHHTTC---
T ss_pred HHHhcCccc
Confidence 999987654
No 33
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.83 E-value=3e-20 Score=187.47 Aligned_cols=176 Identities=18% Similarity=0.106 Sum_probs=136.0
Q ss_pred CccccHHHH-HHHHHHHhhhhcc-cccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCC
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHR-SQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 726 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr-~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~ 726 (964)
|.+++|.+| .+.+..+.+|+.+ +......+ ....++||+|+..|+.++|++||+...+.... .
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~----~ 67 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRG-----------AMGETALHIAALYDNLEAAMVLMEAAPELVFE----P 67 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGC----C
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCC-----------CCCCCHHHHHHHcCCHHHHHHHHHcCchhccc----c
Confidence 578899998 5888889999887 43222221 23578999999999999999999976542110 0
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHH
Q 002122 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 806 (964)
Q Consensus 727 ~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~d 806 (964)
....+..|.||||+|+..|+.++|++||++ |+.... ......+.+.++..+..|.||||+|+. .|+.+
T Consensus 68 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~----~~~~~~~~~~~~~~~~~g~t~L~~A~~-~~~~~ 135 (232)
T 2rfa_A 68 MTSELYEGQTALHIAVINQNVNLVRALLAR-------GASVSA----RATGSVFHYRPHNLIYYGEHPLSFAAC-VGSEE 135 (232)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------TCCTTC----CCCSGGGSCCTTCSCCCCSSHHHHHHH-HTCHH
T ss_pred ccccCCCCcCHHHHHHHcCCHHHHHHHHhC-------CCCCCc----ccCCcceeecccccccCCCCHHHHHHH-cCCHH
Confidence 111345689999999999999999999999 542111 011122345566677799999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH----HHHHHhhhcC
Q 002122 807 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI----HLVQKKINKR 857 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv----~LL~~k~ak~ 857 (964)
+|++|+++ |++++.+|..|.||||+|+..|+.+++ ++|.+++++.
T Consensus 136 ~v~~Ll~~------ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 136 IVRLLIEH------GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp HHHHHHHT------TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 99999999 999999999999999999999999998 7777776643
No 34
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.83 E-value=3.5e-20 Score=184.11 Aligned_cols=125 Identities=26% Similarity=0.242 Sum_probs=114.0
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.+.|+.|+++|+.++|+.||+.+++.+. .+..|.||||+|+..++.+++++||+. |+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~---------~d~~g~t~l~~a~~~~~~~~~~~ll~~-------ga------- 61 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNA---------SDSDGRTPLHHAAENGHKEVVKLLISK-------GA------- 61 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCC---------cCCCCCCHHHHHHHcCCHHHHHHHHhc-------cc-------
Confidence 4578999999999999999997654221 355699999999999999999999999 87
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
+++.+|..|+||||+|+. .|+.++|++|+++ ||++|.+|.+|+||||+|+..|+.+++++|.+
T Consensus 62 ----------d~~~~d~~g~TpLh~A~~-~g~~~~v~~Ll~~------gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 124 (169)
T 4gpm_A 62 ----------DVNAKDSDGRTPLHHAAE-NGHKEVVKLLISK------GADVNAKDSDGRTPLHHAAENGHKEVVKLLIS 124 (169)
T ss_dssp ----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------chhhhccCCCCHHHHHHH-cCCHHHHHHHHHC------cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 899999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcC
Q 002122 853 KINKR 857 (964)
Q Consensus 853 k~ak~ 857 (964)
++++.
T Consensus 125 ~gad~ 129 (169)
T 4gpm_A 125 KGADV 129 (169)
T ss_dssp TTCCT
T ss_pred cCCCc
Confidence 88764
No 35
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.83 E-value=3.3e-20 Score=176.93 Aligned_cols=149 Identities=14% Similarity=0.083 Sum_probs=122.5
Q ss_pred cccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchh
Q 002122 651 IDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLD 729 (964)
Q Consensus 651 ~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le 729 (964)
++++.++ .+.+..+.+|++++.... ......++||+|+..|+.+++++|++..++.+ .
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~ 62 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT------------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD---------A 62 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC------------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT---------C
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------C
Confidence 3455565 466677777777653211 11235789999999999999999998654321 1
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHH
Q 002122 730 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 809 (964)
Q Consensus 730 ~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~ 809 (964)
.+..|.||||+|+..|+.++|++|+++ |+ ++|.+|..|.||||+|+. .|+.++++
T Consensus 63 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v~ 117 (153)
T 1awc_B 63 RTKVDRTPLHMAASEGHANIVEVLLKH-------GA-----------------DVNAKDMLKMTALHWATE-HNHQEVVE 117 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHH
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHc-------CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHHHH
Confidence 245588999999999999999999999 77 889999999999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 810 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 810 lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
+|+++ |++++.+|..|.||||+|+.+|+.+++++|+
T Consensus 118 ~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 118 LLIKY------GADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp HHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred HHHHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHhC
Confidence 99999 9999999999999999999999999999873
No 36
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.83 E-value=3e-20 Score=196.06 Aligned_cols=181 Identities=14% Similarity=0.045 Sum_probs=141.2
Q ss_pred hhhhHHHHHHHHhhhcCc--chhhhhcCccccHHHH-HHHHHHHhhhhcccc-cccccCCCCCCCCCcCccccchHHHHH
Q 002122 624 DVCSEIRMLESALEFNRT--DADVERFGKIDTKNQA-MDFIHEIGWLFHRSQ-SKSRLGHLDPNTDLFPLRRFKWLIEFS 699 (964)
Q Consensus 624 ~iCsEI~~LE~~le~~a~--~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~-~~~~~~~~d~~l~l~ql~R~k~lL~fA 699 (964)
.+...+..++..++.... ....+..|.+++|.+| .+.+..+.+|++.+. ..... .....++||+|
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~~g~tpL~~a 152 (276)
T 4hbd_A 84 LVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQ-----------NRAGYSPIMLT 152 (276)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCC-----------CTTSCCHHHHG
T ss_pred HHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCC-----------CCCCCCHHHHH
Confidence 344455555555443322 1112456888999888 477888888888774 21111 12346789998
Q ss_pred H-----HcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccccc
Q 002122 700 M-----DHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 774 (964)
Q Consensus 700 v-----e~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~ 774 (964)
+ ..+..++++.|++.+... ...+..|.||||+|+..|+.++|++||++ |+
T Consensus 153 ~~~~~~~~~~~~~v~~Ll~~g~~~---------~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-------ga--------- 207 (276)
T 4hbd_A 153 ALATLKTQDDIETVLQLFRLGNIN---------AKASQAGQTALMLAVSHGRVDVVKALLAC-------EA--------- 207 (276)
T ss_dssp GGCCCCSHHHHHHHHHHHHHSCTT---------CCCTTTCCCHHHHHHHTTCHHHHHHHHHT-------TC---------
T ss_pred HHHHhhhhhhHHHHHHHHHcCCCc---------cccCCCCCCHHHHHHHcCCHHHHHHHHhC-------CC---------
Confidence 8 668888888888854221 11244588999999999999999999999 88
Q ss_pred ccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhc-CCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 775 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD-DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 775 ~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~-~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
++|.+|..|.||||+|+. .|+.++|++|++ . |++++.+|..|.||||+|+.+|+.+++++|.++
T Consensus 208 --------d~n~~d~~G~TpLh~A~~-~g~~~iv~~Ll~~~------gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 208 --------DVNVQDDDGSTALMCACE-HGHKEIAGLLLAVP------SCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp --------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHTST------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred --------CCCCCCCCCCCHHHHHHH-CCCHHHHHHHHhcC------CCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 899999999999999999 999999999999 6 999999999999999999999999999999988
Q ss_pred hh
Q 002122 854 IN 855 (964)
Q Consensus 854 ~a 855 (964)
.+
T Consensus 273 ~~ 274 (276)
T 4hbd_A 273 MN 274 (276)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 37
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.83 E-value=4.5e-20 Score=186.34 Aligned_cols=189 Identities=16% Similarity=0.136 Sum_probs=156.0
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.||+..+.. ... ......
T Consensus 44 g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~--~~~--------~~~~~g 111 (237)
T 3b7b_A 44 QRTPLMEAAEN--NHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQM--DVN--------CQDDGG 111 (237)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCC--CTT--------CCCTTS
T ss_pred CCCHHHHHHHh--CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--Ccc--------cCCCCC
Confidence 46788887654 6788899999988876655677899999999 4888888999887621 011 111235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..++.++++.|++.+++.+. .+..|.||||+|++.|+.+++++|+++ |+
T Consensus 112 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 168 (237)
T 3b7b_A 112 WTPMIWATEYKHVDLVKLLLSKGSDINI---------RDNEENICLHWAAFSGCVDIAEILLAA-------KC------- 168 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHHCCHHHHHHHHTT-------TC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCc---------cCCCCCCHHHHHHHCCCHHHHHHHHHc-------CC-------
Confidence 7899999999999999999996543211 245688999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+...+..|.+
T Consensus 169 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 169 ----------DLHAVNIHGDSPLHIAAR-ENRYDCVVLFLSR------DSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp ----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred ----------CCCCcCCCCCCHHHHHHH-hCCHhHHHHHHHc------CCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999 9999999999999 99999999999999999999999876666655
Q ss_pred hh
Q 002122 853 KI 854 (964)
Q Consensus 853 k~ 854 (964)
.+
T Consensus 232 ~l 233 (237)
T 3b7b_A 232 AL 233 (237)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 38
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.83 E-value=5.5e-20 Score=203.31 Aligned_cols=187 Identities=18% Similarity=0.191 Sum_probs=103.6
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFK 693 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k 693 (964)
..|+++|... ..+..++.+++.++.....+..|.+++|.++ .+.+..+.||+.++...... .....
T Consensus 213 ~t~L~~A~~~--~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----------~~~g~ 279 (437)
T 1n11_A 213 YTPLHIAAKQ--NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG-----------NKSGL 279 (437)
T ss_dssp CCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC-----------CTTCC
T ss_pred CCHHHHHHHc--CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCC-----------CCCCC
Confidence 4455444332 4445555555555443333344555555555 35555555555544211111 11234
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 773 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv 773 (964)
++||+|+..|+.++++.|++.+++.+. .+..|.||||+|++.|+.++|++||++ |+
T Consensus 280 t~L~~A~~~~~~~~~~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga-------- 335 (437)
T 1n11_A 280 TPLHLVAQEGHVPVADVLIKHGVMVDA---------TTRMGYTPLHVASHYGNIKLVKFLLQH-------QA-------- 335 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTC---------CCSSCCCHHHHHHHSSCSHHHHHHHHT-------TC--------
T ss_pred CHHHHHHHcCCHHHHHHHHhCCccCCC---------CCCCCCCHHHHHHHcCcHHHHHHHHhc-------CC--------
Confidence 566666666666666666654332110 123355666666666666666666666 55
Q ss_pred cccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 774 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 774 ~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
++|.+|..|.||||+|+. .|+.++|++|+++ ||+++.+|.+|.||||+|+..|+.+++++|...
T Consensus 336 ---------d~n~~~~~g~t~L~~A~~-~g~~~iv~~Ll~~------ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~ 399 (437)
T 1n11_A 336 ---------DVNAKTKLGYSPLHQAAQ-QGHTDIVTLLLKN------GASPNEVSSDGTTPLAIAKRLGYISVTDVLKVV 399 (437)
T ss_dssp ---------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ---------CCCCCCCCCCCHHHHHHH-CChHHHHHHHHHC------cCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhc
Confidence 566666666666666666 6666666666666 666666666666666666666666666666554
Q ss_pred h
Q 002122 854 I 854 (964)
Q Consensus 854 ~ 854 (964)
.
T Consensus 400 ~ 400 (437)
T 1n11_A 400 T 400 (437)
T ss_dssp C
T ss_pred c
Confidence 3
No 39
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.83 E-value=2.6e-20 Score=193.60 Aligned_cols=207 Identities=14% Similarity=0.056 Sum_probs=149.0
Q ss_pred CcceeecchhhhhHHHHHHHHhh----hcCcchh----hhhcCccccHHHHH----HHHHHHhhhhcccccccc----cC
Q 002122 615 FFPFIVAEEDVCSEIRMLESALE----FNRTDAD----VERFGKIDTKNQAM----DFIHEIGWLFHRSQSKSR----LG 678 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le----~~a~~~~----~~e~g~~~~h~~al----~fL~EIGWLLqr~~~~~~----~~ 678 (964)
..|++.|... +.+..++.+++ .+....+ .+..|.+++|.+|. +.+..+.+|++.+..... ..
T Consensus 14 ~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 14 RRSIFDAVAQ--SNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp HHHHHHHHHT--TCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHc--CCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 5677776644 44444444443 3332221 14578999999985 677777777776531100 00
Q ss_pred CCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC-----CCchhhccCCCcHHHHHHHcCCHHHHHHH
Q 002122 679 HLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE-----HPSLDLALTELGLLHRAVRKNSRPLVDLL 753 (964)
Q Consensus 679 ~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~-----~~~le~~l~G~TpLH~AVr~g~~e~VelL 753 (964)
.. . ........++||+|+..|+.++|++||+.+++.+..... ......+..|.||||+|++.|+.++|++|
T Consensus 92 ~~---~-~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 167 (273)
T 2pnn_A 92 AS---Y-TDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167 (273)
T ss_dssp CC---C-CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred cc---c-ccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 00 0 001124578999999999999999999976543321100 00000112589999999999999999999
Q ss_pred hc---cCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC---------HHHHHHhhcCCCCCccc
Q 002122 754 LR---FVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS---------EDVLDALTDDPGMVGIE 821 (964)
Q Consensus 754 L~---~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~---------~dVV~lLL~~p~~vg~g 821 (964)
|+ + |+ ++|.+|..|+||||+|+. .|+ .+++++|+++ |
T Consensus 168 l~~~~~-------ga-----------------d~~~~d~~g~tpLh~A~~-~~~~~~~~~~~~~~~v~~Ll~~------g 216 (273)
T 2pnn_A 168 LQNSWQ-------PA-----------------DISARDSVGNTVLHALVE-VADNTVDNTKFVTSMYNEILIL------G 216 (273)
T ss_dssp HHCSSC-------CC-----------------CTTCCCTTSCCHHHHHHH-HCCSCHHHHHHHHHHHHHHHHH------H
T ss_pred HhcccC-------CC-----------------CceeeCCCCCcHHHHHHH-ccCcchhHHHHHHHHHHHHHHh------h
Confidence 99 6 77 899999999999999999 777 7999999999 9
Q ss_pred cccc-------cCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 822 AWKN-------ARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 822 Adin-------arD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++| .+|..|.||||+|+.+||.+++++|.+++++-+
T Consensus 217 a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp 260 (273)
T 2pnn_A 217 AKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEP 260 (273)
T ss_dssp HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--
T ss_pred hhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCc
Confidence 9997 499999999999999999999999999998544
No 40
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.83 E-value=6.9e-20 Score=202.53 Aligned_cols=202 Identities=19% Similarity=0.217 Sum_probs=166.2
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... ..+..++.+++.++.....+..+.+++|.++ .+.+..+.||++.+......+ ...
T Consensus 179 g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-----------~~g 245 (437)
T 1n11_A 179 GLTPLHVAVHH--NNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES-----------VQG 245 (437)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTC
T ss_pred CCCHHHHHHHc--CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----------CCC
Confidence 46788877654 6677888899888876555567899999998 478888899988775322222 124
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.++|++|++..++.+. .+..|.||||+|++.|+.+++++|+++ |+
T Consensus 246 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---------~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 302 (437)
T 1n11_A 246 VTPLHLAAQEGHAEMVALLLSKQANGNL---------GNKSGLTPLHLVAQEGHVPVADVLIKH-------GV------- 302 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCTTC---------CCTTCCCHHHHHHHHTCHHHHHHHHHH-------TC-------
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHhC-------Cc-------
Confidence 7899999999999999999997554221 245688999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..+..|.||||+|+. .|+.++|++|+++ |+++|.+|..|.||||+|+.+||.+++++|.+
T Consensus 303 ----------~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 365 (437)
T 1n11_A 303 ----------MVDATTRMGYTPLHVASH-YGNIKLVKFLLQH------QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK 365 (437)
T ss_dssp ----------CTTCCCSSCCCHHHHHHH-SSCSHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------cCCCCCCCCCCHHHHHHH-cCcHHHHHHHHhc------CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHH
Confidence 889999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcCCC---CCCceeecC
Q 002122 853 KINKRPN---GGHVVVDIC 868 (964)
Q Consensus 853 k~ak~~~---~~~v~v~ip 868 (964)
++++... .+.+.++++
T Consensus 366 ~ga~~~~~~~~g~t~l~~A 384 (437)
T 1n11_A 366 NGASPNEVSSDGTTPLAIA 384 (437)
T ss_dssp TTCCSCCCCSSSCCHHHHH
T ss_pred CcCCCCCCCCCCCCHHHHH
Confidence 9876432 344555544
No 41
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.83 E-value=1.1e-20 Score=177.52 Aligned_cols=125 Identities=22% Similarity=0.220 Sum_probs=113.2
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..|+.++|+.||+..++.+ ..+..|.||||+|+. ++.++|++||++ |+
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------g~----- 68 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGADPN---------ALNRFGRRPIQVMMM-GSAQVAELLLLH-------GA----- 68 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTCCTTTTTSTT-SCHHHHHHHHHH-------TC-----
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCcC---------CcCCCCCCHHHHHHc-CCHHHHHHHHHC-------CC-----
Confidence 45789999999999999999999654321 124568999999999 999999999999 77
Q ss_pred ccccccccccccCCCcCCCC-CChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPA-GLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~-G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
++|.+|.. |.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++
T Consensus 69 ------------~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~ 129 (136)
T 1d9s_A 69 ------------EPNCADPATLTRPVHDAAR-EGFLDTLVVLHRA------GARLDVCDAWGRLPVDLAEEQGHRDIARY 129 (136)
T ss_dssp ------------CSSCCBTTTTBCHHHHHHH-HTCHHHHHHHHHT------CCCCCCCSSSSSCHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCcCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 88999999 9999999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhc
Q 002122 850 VQKKINK 856 (964)
Q Consensus 850 L~~k~ak 856 (964)
|.+++++
T Consensus 130 Ll~~Gad 136 (136)
T 1d9s_A 130 LHAATGD 136 (136)
T ss_dssp HHHHHCC
T ss_pred HHHcCCC
Confidence 9998864
No 42
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.83 E-value=4.3e-21 Score=202.92 Aligned_cols=182 Identities=18% Similarity=0.101 Sum_probs=134.5
Q ss_pred CcceeecchhhhhHH-HHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 615 FFPFIVAEEDVCSEI-RMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 615 ffP~LVad~~iCsEI-~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
..|++.+.. +... ..++.+++.|++....+..|.+++|.+| .+.+..+.+|+..+......+ ...
T Consensus 53 ~t~L~~a~~--~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~-----------~~g 119 (269)
T 4b93_B 53 CHPLCQCPK--CAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARN-----------ADQ 119 (269)
T ss_dssp ------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCC-----------TTC
T ss_pred CCHHHHHHH--hCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccC-----------CCC
Confidence 567666542 2332 3567777888776555678999999999 477778888888774322221 234
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++|++|+..++.++++.||+..++.+ ..+..|.||||+||+.|+.++|++||++ |+
T Consensus 120 ~t~l~~a~~~~~~~~~~~Ll~~g~~~n---------~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-------ga------- 176 (269)
T 4b93_B 120 AVPLHLACQQGHFQVVKCLLDSNAKPN---------KKDLSGNTPLIYACSGGHHELVALLLQH-------GA------- 176 (269)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSC---------CCCTTCCCHHHHHHHTTCGGGHHHHHHT-------TC-------
T ss_pred CCccccccccChHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHCCCHHHHHHHHHC-------CC-------
Confidence 789999999999999999999654322 1355689999999999999999999999 88
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..+..|.||||+||. .|+.++|++|+++ ||+++++|..|.||||+|+.+++ ++++|+
T Consensus 177 ----------dvn~~~~~g~t~Lh~A~~-~g~~~~v~~Ll~~------Gad~~~~d~~G~TpL~~A~~~~~--i~~lL~ 236 (269)
T 4b93_B 177 ----------SINASNNKGNTALHEAVI-EKHVFVVELLLLH------GASVQVLNKRQRTAVDCAEQNSK--IMELLQ 236 (269)
T ss_dssp ----------CTTCBCTTSCBHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCTTSCCSGGGSCTTCH--HHHHTT
T ss_pred ----------CCCccccCCCcHHHHHHH-cCCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHhCCc--HHHHHH
Confidence 899999999999999999 9999999999999 99999999999999999987765 555553
No 43
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.83 E-value=4.1e-20 Score=173.68 Aligned_cols=124 Identities=22% Similarity=0.153 Sum_probs=111.6
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..|+.++|+.||+..++.+ ..+..|.||||+||..|+.++|++||++ |+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~----- 71 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVN---------AKDEYGLTPLYLATAHGHLEIVEVLLKN-------GA----- 71 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 45789999999999999999999654321 1245688999999999999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|
T Consensus 72 ------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 72 ------------DVNAVDAIGFTPLHLAAF-IGHLEIAEVLLKH------GADVNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp ------------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCcCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 889999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHhh
Q 002122 851 QKKI 854 (964)
Q Consensus 851 ~~k~ 854 (964)
.+++
T Consensus 133 l~~G 136 (136)
T 2jab_A 133 QKLN 136 (136)
T ss_dssp HHC-
T ss_pred HHcC
Confidence 8764
No 44
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.82 E-value=2.5e-20 Score=179.27 Aligned_cols=157 Identities=19% Similarity=0.143 Sum_probs=123.9
Q ss_pred cCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCC
Q 002122 648 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 726 (964)
Q Consensus 648 ~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~ 726 (964)
.+.++++.++ .+.+..+.++++..... .. ....+..++||+|+..|+.+++++||+..++.+
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~--~~--------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------- 69 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVN--CR--------DIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH------- 69 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTT--CC--------CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-------
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCC--cc--------ccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC-------
Confidence 3456777777 57788888887754210 00 111234689999999999999999998654321
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHH
Q 002122 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 806 (964)
Q Consensus 727 ~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~d 806 (964)
..+..|.||||+|++.|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+.+
T Consensus 70 --~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~ 122 (165)
T 3twr_A 70 --AKDKGGLVPLHNACSYGHYEVAELLVKH-------GA-----------------VVNVADLWKFTPLHEAAA-KGKYE 122 (165)
T ss_dssp --CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTCCCHHHHHHH-TTCHH
T ss_pred --ccCCCCCCHHHHHHHcCcHHHHHHHHhC-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHH
Confidence 1244588999999999999999999998 77 788889999999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 807 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
++++|+++ |++++.+|..|.||||+|+. |+.+++++|.++++
T Consensus 123 ~v~~Ll~~------ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 123 ICKLLLQH------GADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHT------TCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHHc------CCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999 99999999999999999876 89999999988764
No 45
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.82 E-value=1.2e-19 Score=164.60 Aligned_cols=124 Identities=27% Similarity=0.298 Sum_probs=112.5
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
+++||+|+..|+.++++.|++...+.+ ..+..|.||||+|+..++.+++++|++. |+
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 59 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGADVN---------AKDKNGRTPLHLAARNGHLEVVKLLLEA-------GA------- 59 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-------
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCCCC---------CcCCCCCcHHHHHHHcCcHHHHHHHHHc-------CC-------
Confidence 679999999999999999999654321 1244588999999999999999999999 76
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
+++..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.+
T Consensus 60 ----------~~~~~~~~g~t~l~~A~~-~~~~~~~~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 60 ----------DVNAKDKNGRTPLHLAAR-NGHLEVVKLLLEA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp ----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CCcccCCCCCcHHHHHHH-cChHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 788899999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhc
Q 002122 853 KINK 856 (964)
Q Consensus 853 k~ak 856 (964)
++++
T Consensus 123 ~Gad 126 (126)
T 1n0r_A 123 AGAY 126 (126)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 8864
No 46
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.82 E-value=4.3e-20 Score=192.88 Aligned_cols=216 Identities=14% Similarity=0.080 Sum_probs=159.9
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccc
Q 002122 615 FFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFK 693 (964)
Q Consensus 615 ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k 693 (964)
-.|++.|... +.+..++.+++.+++....+..|.+++|.+| .+.+..+.||++++......+ ....
T Consensus 41 ~t~l~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-----------~~g~ 107 (299)
T 1s70_B 41 GAVFLAACSS--GDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPD-----------NEGW 107 (299)
T ss_dssp HHHHHHHHHH--TCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSC
T ss_pred ccHHHHHHHc--CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------CCCC
Confidence 4567766544 8889999999998876655678999999999 488888999998875322222 2357
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc----
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN---- 769 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~---- 769 (964)
+|||+|+..|+.++|++||+.+++.+. .+..|.||||+|+..++.++++.|+... |.....
T Consensus 108 tpL~~A~~~g~~~~v~~Ll~~g~~~~~---------~~~~g~t~l~~A~~~~~~~~~~~ll~~~------~~~~~~~~~~ 172 (299)
T 1s70_B 108 IPLHAAASCGYLDIAEYLISQGAHVGA---------VNSEGDTPLDIAEEEAMEELLQNEVNRQ------GVDIEAARKE 172 (299)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHCCSHHHHHHHHHHHHHH------TCCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCC---------cCCCCCCHHHHHHhcchHHHHHHHHhhc------CCCchhhhhh
Confidence 899999999999999999996543221 2456889999999999999998777531 110000
Q ss_pred ---------cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHH
Q 002122 770 ---------KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARL 840 (964)
Q Consensus 770 ---------~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~ 840 (964)
+.+.... .......+..|.||||+||. .|+.++|++|+++ |+++|.+|..|.||||+|+.
T Consensus 173 ~~~~~~~~~~~~l~~~----~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------g~d~~~~d~~g~tpL~~A~~ 241 (299)
T 1s70_B 173 EERIMLRDARQWLNSG----HINDVRHAKSGGTALHVAAA-KGYTEVLKLLIQA------RYDVNIKDYDGWTPLHAAAH 241 (299)
T ss_dssp HHHHHHHHHHHHHHHT----CCCCCCCTTTCCCHHHHHHH-HTCHHHHHHHHTT------TCCTTCCCTTCCCHHHHHHH
T ss_pred hhhHHHHHHHHHHhcc----CcchhhhcCCCCCHHHHHHH-CCcHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHh
Confidence 0000000 01233456789999999999 8999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHHhhhcCC---CCCCceeecCC
Q 002122 841 RGHYSYIHLVQKKINKRP---NGGHVVVDICG 869 (964)
Q Consensus 841 rGh~svv~LL~~k~ak~~---~~~~v~v~ip~ 869 (964)
.|+.+++++|.+++++.. ..+.+.++++.
T Consensus 242 ~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 242 WGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 999999999999987643 24556666653
No 47
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.81 E-value=1e-19 Score=187.12 Aligned_cols=189 Identities=17% Similarity=0.092 Sum_probs=138.8
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
+..|.+++|.+| .+.+..+.+|+.++....... .......+|||+|+..|+.++|++||+.+++.+.
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~---- 73 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLD--------LQNDLGQTALHLAAILGEASTVEKLYAAGAGVLV---- 73 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGG--------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC----
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccc--------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC----
Confidence 456899999999 488888888887764311111 1112357899999999999999999997553221
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCc------------ccccccc-----------ccccccc
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGS------------ENKALVD-----------GVHKGFL 781 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~------------~~~~lv~-----------~a~~~y~ 781 (964)
.+..|.||||+|++.|+.++|++|++..+....+.... ...++.. .....+.
T Consensus 74 -----~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (282)
T 1oy3_D 74 -----AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWR 148 (282)
T ss_dssp -----CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGG
T ss_pred -----CCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhh
Confidence 24568999999999999999999999832210000000 0000000 0011123
Q ss_pred cCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCC-CCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 782 FRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDS-SGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 782 fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~-~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
.+++..+..|.||||+|+. .|+.++|++|+++ |++++.+|. .|.||||+|+.+|+.+++++|.+++++..
T Consensus 149 ~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~ 219 (282)
T 1oy3_D 149 LQLEAENYDGHTPLHVAVI-HKDAEMVRLLRDA------GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT 219 (282)
T ss_dssp GGTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred hcCCCcCCCCcCHHHHHHH-cCCHHHHHHHHHc------CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 4678899999999999999 9999999999999 999999996 49999999999999999999999987643
No 48
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.81 E-value=2e-19 Score=192.44 Aligned_cols=233 Identities=15% Similarity=0.019 Sum_probs=156.6
Q ss_pred cceeecchhhhhHHHHHHHHhhhcCcchhh-hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCC------------
Q 002122 616 FPFIVAEEDVCSEIRMLESALEFNRTDADV-ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLD------------ 681 (964)
Q Consensus 616 fP~LVad~~iCsEI~~LE~~le~~a~~~~~-~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d------------ 681 (964)
.|++.|.+. +.+..++.+++.|++.... ++.|.+++|.+| .+.+..+.+||+++......+...
T Consensus 27 t~L~~Av~~--g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 27 HLLIKAVQN--EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred hHHHHHHHc--CCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 455554443 6677777777777654332 234677777777 366666667766654322211110
Q ss_pred -----------CCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCC-CchhhccCCCcHHHHHHHcCCHHH
Q 002122 682 -----------PNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEH-PSLDLALTELGLLHRAVRKNSRPL 749 (964)
Q Consensus 682 -----------~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~-~~le~~l~G~TpLH~AVr~g~~e~ 749 (964)
..++ ..-....++|++|+..|+.++++.|++.+++.+...... .....+..|.||||+||++|+.++
T Consensus 105 ~~~~~~~~~~~~~~~-~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~ 183 (337)
T 4g8k_A 105 VKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV 183 (337)
T ss_dssp HHHHHHHHTTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHH
T ss_pred chhhHHhhhccchhh-hhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHH
Confidence 0011 122345789999999999999999999876544321111 111234568999999999999999
Q ss_pred HHHHhccC-CCcc-ccccCcccccccc----ccccc----------cccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhc
Q 002122 750 VDLLLRFV-PLEV-SDRLGSENKALVD----GVHKG----------FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 813 (964)
Q Consensus 750 VelLL~~~-p~~~-~dGa~~~~~~lv~----~a~~~----------y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~ 813 (964)
|++||... .+.. .+.. ..+++.. +.... ..-++|.+|..|+||||+|+. .|+.++|++|++
T Consensus 184 v~~LL~~~gad~n~~d~~--g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~-~~~~~~v~~Ll~ 260 (337)
T 4g8k_A 184 LKILLDEMGADVNACDNM--GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE-KKHLGLVQRLLE 260 (337)
T ss_dssp HHHHHHHSCCCTTCCCTT--SCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH-TTCHHHHHHHHT
T ss_pred HHHHHhccCCCcCccCCC--CCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH-hhhhHHHHHHHH
Confidence 99999641 1100 0000 1122221 11111 114788999999999999999 999999999998
Q ss_pred CCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCCC
Q 002122 814 DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPN 859 (964)
Q Consensus 814 ~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~~ 859 (964)
.. ++++|.+|.+|.||||+|+.+||.++|++|++++++...
T Consensus 261 ~~-----~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 261 QE-----HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp ST-----TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT
T ss_pred hc-----CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 63 899999999999999999999999999999999987653
No 49
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.81 E-value=5.1e-19 Score=181.03 Aligned_cols=200 Identities=14% Similarity=0.028 Sum_probs=160.0
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.+|++++......+ ...
T Consensus 39 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~~g 105 (285)
T 1wdy_A 39 GWTPLHNAVQM--SREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECD-----------FYG 105 (285)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC-----------TTC
T ss_pred CCcHHHHHHHc--CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC-----------ccc
Confidence 46788887654 6778889999988876655678899999998 588888899988774322222 234
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCC-chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP-SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~-~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
.++||+|+..++.+++++|++.+.+......... ....+..|.||||+|++.|+.++|++|++.. |+
T Consensus 106 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~------~~------ 173 (285)
T 1wdy_A 106 FTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM------GA------ 173 (285)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTS------CC------
T ss_pred CCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhc------CC------
Confidence 7899999999999999999997654332111000 0011456889999999999999999999762 44
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCC----HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS----EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 847 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~----~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv 847 (964)
+++..+..|.||||+|+. .++ .+++++|+++ |++++.+|..|.||||+|+.+|+.+++
T Consensus 174 -----------~~~~~~~~g~t~l~~a~~-~~~~~~~~~i~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v 235 (285)
T 1wdy_A 174 -----------DVNACDNMGRNALIHALL-SSDDSDVEAITHLLLDH------GADVNVRGERGKTPLILAVEKKHLGLV 235 (285)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-CSCTTTHHHHHHHHHHT------TCCSSCCCTTSCCHHHHHHHTTCHHHH
T ss_pred -----------CCCccCCCCCCHHHHHHH-ccccchHHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 788999999999999999 888 9999999999 999999999999999999999999999
Q ss_pred HHHHH-hhhc
Q 002122 848 HLVQK-KINK 856 (964)
Q Consensus 848 ~LL~~-k~ak 856 (964)
++|.+ .+++
T Consensus 236 ~~Ll~~~g~~ 245 (285)
T 1wdy_A 236 QRLLEQEHIE 245 (285)
T ss_dssp HHHHHSSSCC
T ss_pred HHHHhccCCC
Confidence 99988 4543
No 50
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.81 E-value=8.9e-20 Score=178.36 Aligned_cols=160 Identities=18% Similarity=0.108 Sum_probs=131.5
Q ss_pred CccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
+..+++.+| .+.+..+.++++.... ... .......++||+|+..|+.++|++||+..++.+.
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~--~~~--------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 67 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTEN--DLN--------QGDDHGFSPLHWACREGRSAVVEMLIMRGARINV------- 67 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTS--CTT--------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcc--ccc--------ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC-------
Confidence 345677777 5778888888876421 011 1112346899999999999999999996543221
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHH
Q 002122 728 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 807 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dV 807 (964)
.+..|.||||+|+..|+.++|++||++ |+ ++|..|..|.||||+|+. .|+.++
T Consensus 68 --~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~d~~g~t~L~~A~~-~~~~~~ 120 (179)
T 3f6q_A 68 --MNRGDDTPLHLAASHGHRDIVQKLLQY-------KA-----------------DINAVNEHGNVPLHYACF-WGQDQV 120 (179)
T ss_dssp --CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHH
T ss_pred --cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCccCCCCCCHHHHHHH-cCCHHH
Confidence 245688999999999999999999999 77 889999999999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 808 LDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 808 V~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+++|+++ |++++.+|..|.||||+|+..++.+++++|.+++++..
T Consensus 121 v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 121 AEDLVAN------GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN 165 (179)
T ss_dssp HHHHHHT------TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHC------CCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 9999999 99999999999999999999999999999999987754
No 51
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.81 E-value=2.1e-19 Score=187.58 Aligned_cols=171 Identities=14% Similarity=0.040 Sum_probs=134.3
Q ss_pred cCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCC
Q 002122 648 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 726 (964)
Q Consensus 648 ~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~ 726 (964)
.+.+.++.+| .+.+..+.+|+.++......+ ....++||+|+..|+.++|++||+.+++.+.
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------ 101 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYAN-----------VDGLTALHQACIDDNVDMVKFLVENGANINQ------ 101 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBC-----------TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC------
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccC-----------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------
Confidence 4567788888 588999999998774322222 2357899999999999999999996543211
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHH
Q 002122 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 806 (964)
Q Consensus 727 ~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~d 806 (964)
.+..|.||||+|+..|+.++|++||++ |+ +++..+..|.||||+|+. .|+.+
T Consensus 102 ---~~~~g~tpL~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~l~~A~~-~~~~~ 153 (299)
T 1s70_B 102 ---PDNEGWIPLHAAASCGYLDIAEYLISQ-------GA-----------------HVGAVNSEGDTPLDIAEE-EAMEE 153 (299)
T ss_dssp ---CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHCCS-HHHHH
T ss_pred ---CCCCCCcHHHHHHHcCCHHHHHHHHhC-------CC-----------------CCCCcCCCCCCHHHHHHh-cchHH
Confidence 245688999999999999999999999 77 889999999999999999 89999
Q ss_pred HHHHhhcCCCCCccccccc--------------------------cCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC--
Q 002122 807 VLDALTDDPGMVGIEAWKN--------------------------ARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP-- 858 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdin--------------------------arD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~-- 858 (964)
+++.|+... +++++ ..|..|.||||+|+.+|+.+++++|.+++++..
T Consensus 154 ~~~~ll~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~ 228 (299)
T 1s70_B 154 LLQNEVNRQ-----GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIK 228 (299)
T ss_dssp HHHHHHHHH-----TCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCC
T ss_pred HHHHHHhhc-----CCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCc
Confidence 998777542 33332 367899999999999999999999999876543
Q ss_pred -CCCCceeecC
Q 002122 859 -NGGHVVVDIC 868 (964)
Q Consensus 859 -~~~~v~v~ip 868 (964)
..+.+.++++
T Consensus 229 d~~g~tpL~~A 239 (299)
T 1s70_B 229 DYDGWTPLHAA 239 (299)
T ss_dssp CTTCCCHHHHH
T ss_pred CCCCCcHHHHH
Confidence 2344444443
No 52
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.81 E-value=2.4e-20 Score=179.17 Aligned_cols=127 Identities=23% Similarity=0.218 Sum_probs=111.4
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..|+.++|+.||+.+++.+ ..+..|.||||+|+ .|+.++|++||++ |+
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~-~~~~~~v~~Ll~~-------g~----- 68 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPN---------APNSYGRRPIQVMM-MGSARVAELLLLH-------GA----- 68 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTT---------CCCSSSCCTTTSSC-TTCHHHHHHHHTT-------TC-----
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHH-cCCHHHHHHHHHc-------CC-----
Confidence 45789999999999999999999654321 12456899999996 8999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCCh-HHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLT-PIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~T-PLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
++|.+|..|.| |||+|+. .|+.++|++|+++ |++++.+|..|.||||+|+..|+.+++++
T Consensus 69 ------------~~~~~d~~g~ttpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~v~~ 129 (156)
T 1bi7_B 69 ------------EPNCADPATLTRPVHDAAR-EGFLDTLVVLHRA------GARLDVRDAWGRLPVDLAEELGHRDVARY 129 (156)
T ss_dssp ------------CCCCCCTTTCCCHHHHHHH-HTCHHHHHHHHHH------TCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCcCCCCCcHHHHHHHH-CCCHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence 88999999999 9999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhcCC
Q 002122 850 VQKKINKRP 858 (964)
Q Consensus 850 L~~k~ak~~ 858 (964)
|.+++++..
T Consensus 130 Ll~~ga~~~ 138 (156)
T 1bi7_B 130 LRAAAGGTR 138 (156)
T ss_dssp HSSCC----
T ss_pred HHHcCCCCC
Confidence 999887653
No 53
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.81 E-value=5.8e-20 Score=194.48 Aligned_cols=189 Identities=15% Similarity=0.055 Sum_probs=153.5
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++..... +|.+++|.+| .+.+..+.+|++++......+ ...
T Consensus 31 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d-----------~~g 95 (285)
T 3kea_A 31 GHSASYYAIAD--NNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFD-----------DKG 95 (285)
T ss_dssp SCCHHHHHHHT--TCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCC-----------TTS
T ss_pred CCCHHHHHHHc--CCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-----------CCC
Confidence 47888887664 7788889999887765432 5889999998 477888888888774322222 235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCC-CcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTE-LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G-~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
.+|||+|+..|+.++|++||+.+++.+. .+..| .||||+|+..|+.++|++|+++ |+
T Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~---------~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 153 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLFVKKNWRLMF---------YGKTGWKTSFYHAVMLNDVSIVSYFLSE-------IP------ 153 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGG---------CSSSGGGSHHHHHHHTTCHHHHHHHHTT-------SC------
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCc---------cCCCCCCCHHHHHHHcCCHHHHHHHHhC-------CC------
Confidence 7899999999999999999997554221 23446 7999999999999999999999 44
Q ss_pred cccccccccccCCCcCCC-CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCH-HHHHHHcCCHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTP-EDYARLRGHYSYIHL 849 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~-~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TP-Lh~A~~rGh~svv~L 849 (964)
+ ..+. .|.||||+|+. .|+.++|++|+++ |++++.+|..|.|| ||+|+..|+.+++++
T Consensus 154 -----------~--~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------gad~n~~~~~g~t~~L~~A~~~~~~~~v~~ 213 (285)
T 3kea_A 154 -----------S--TFDLAILLSCIHITIK-NGHVDMMILLLDY------MTSTNTNNSLLFIPDIKLAIDNKDIEMLQA 213 (285)
T ss_dssp -----------T--TCCCSTHHHHHHHHHH-TTCHHHHHHHHHH------HHHTCTTCCCBCCTTHHHHHHHTCHHHHHH
T ss_pred -----------c--cccccCCccHHHHHHH-cChHHHHHHHHHc------CCCCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence 2 2233 89999999999 9999999999999 99999999999998 999999999999999
Q ss_pred HHHhhhcCCC
Q 002122 850 VQKKINKRPN 859 (964)
Q Consensus 850 L~~k~ak~~~ 859 (964)
|.+++++...
T Consensus 214 Ll~~gad~~~ 223 (285)
T 3kea_A 214 LFKYDINIYS 223 (285)
T ss_dssp HTTSCBCSTT
T ss_pred HHHcCCCCCC
Confidence 9999887653
No 54
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.80 E-value=1.2e-19 Score=181.68 Aligned_cols=186 Identities=17% Similarity=0.108 Sum_probs=148.7
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcC--cchh-hhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNR--TDAD-VERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPL 689 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a--~~~~-~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql 689 (964)
+..|+++|... +.++.++.+++.++ +... .+..|.+++|.++ .+.+..+.+|++++.... .. ...
T Consensus 36 g~t~L~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~--------~~~ 104 (228)
T 2dzn_A 36 GRIPLHWSVSF--QAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD-LN--------KIT 104 (228)
T ss_dssp SCCHHHHHHHT--TCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCC-TT--------CCC
T ss_pred CCCHHHHHHHc--CCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-cc--------cCC
Confidence 47888887654 67788889998884 3333 3567899999999 588888899988762100 01 111
Q ss_pred cccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc-cCcc
Q 002122 690 RRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR-LGSE 768 (964)
Q Consensus 690 ~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dG-a~~~ 768 (964)
....++||+|+..++.++++.|++.+++.+. .+..|.||||+|++.|+.+++++|+++ | +
T Consensus 105 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~--- 165 (228)
T 2dzn_A 105 NQGVTCLHLAVGKKWFEVSQFLIENGASVRI---------KDKFNQIPLHRAASVGSLKLIELLCGL-------GKS--- 165 (228)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC---------CCTTSCCHHHHHHHTTCHHHHHHHHTT-------TCC---
T ss_pred cCCCCHHHHHHHcCCHhHHHHHHHcCCCccc---------cCCCCCCHHHHHHHcCCHHHHHHHHhc-------Ccc---
Confidence 2357899999999999999999996543211 245688999999999999999999999 6 4
Q ss_pred ccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhh-cCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 002122 769 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT-DDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 847 (964)
Q Consensus 769 ~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL-~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv 847 (964)
++|.+|..|.||||+|+. .|+.+++++|+ ++ ||+++.+|..|.||||+|... +++
T Consensus 166 --------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~~------ga~~~~~~~~g~t~l~~A~~~---~~~ 221 (228)
T 2dzn_A 166 --------------AVNWQDKQGWTPLFHALA-EGHGDAAVLLVEKY------GAEYDLVDNKGAKAEDVALNE---QVK 221 (228)
T ss_dssp --------------CSCCCCTTSCCHHHHHHH-TTCHHHHHHHHHHH------CCCSCCBCTTSCBGGGGCSST---THH
T ss_pred --------------cccCcCCCCCCHHHHHHH-cCCHHHHHHHHHhc------CCCCCccCCCCCcHHHHHHHH---HHH
Confidence 789999999999999999 99999999999 78 999999999999999999765 466
Q ss_pred HHHHHh
Q 002122 848 HLVQKK 853 (964)
Q Consensus 848 ~LL~~k 853 (964)
++|.++
T Consensus 222 ~~l~~~ 227 (228)
T 2dzn_A 222 KFFLNN 227 (228)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 666654
No 55
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.80 E-value=2e-19 Score=184.80 Aligned_cols=135 Identities=21% Similarity=0.093 Sum_probs=113.0
Q ss_pred ccchHHHHHHHc---CchHHHHHHhhhhccCcc-c--CCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc
Q 002122 691 RFKWLIEFSMDH---EWCAVVKKLLHILLDGTV-S--LGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR 764 (964)
Q Consensus 691 R~k~lL~fAve~---g~~aVVk~LL~~l~d~~v-d--~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dG 764 (964)
...++||+|+.. |+.++|++||+.+++... + .+. .....+..|.||||+|+..|+.++|++||++ |
T Consensus 42 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------g 113 (256)
T 2etb_A 42 TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA-QCTDEFYQGHSALHIAIEKRSLQCVKLLVEN-------G 113 (256)
T ss_dssp TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC-CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------T
T ss_pred CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc-ccccccccCCCHHHHHHHcCCHHHHHHHHHc-------C
Confidence 357899999999 999999999998765431 1 000 0011235689999999999999999999999 6
Q ss_pred cCccccccccccccccccCCCcCCCC-------------CChHHHHHHhhCCCHHHHHHhhc---CCCCCccccccccCC
Q 002122 765 LGSENKALVDGVHKGFLFRPDVIGPA-------------GLTPIHIAAGKDGSEDVLDALTD---DPGMVGIEAWKNARD 828 (964)
Q Consensus 765 a~~~~~~lv~~a~~~y~fdpn~~d~~-------------G~TPLHiAA~~~G~~dVV~lLL~---~p~~vg~gAdinarD 828 (964)
+ ++|..+.. |.||||+|+. .|+.++|++|++ + |+++|.+|
T Consensus 114 a-----------------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~~~~------ga~~n~~d 169 (256)
T 2etb_A 114 A-----------------DVHLRACGRFFQKHQGTCFYFGELPLSLAAC-TKQWDVVTYLLENPHQ------PASLEATD 169 (256)
T ss_dssp C-----------------CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHH-TTCHHHHHHHHHCSSC------CCCTTCCC
T ss_pred C-----------------CCCcccccccccccccccccCCCCHHHHHHH-cCCHHHHHHHHhcccc------CCCcCccC
Confidence 6 55655554 9999999999 999999999999 8 99999999
Q ss_pred CCCCCHHHHHHH--cCCHH-------HHHHHHHhhhcC
Q 002122 829 SSGSTPEDYARL--RGHYS-------YIHLVQKKINKR 857 (964)
Q Consensus 829 ~~G~TPLh~A~~--rGh~s-------vv~LL~~k~ak~ 857 (964)
..|.||||+|+. .++.+ ++++|.+++++.
T Consensus 170 ~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 170 SLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp TTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 999999999999 88988 999999998765
No 56
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.80 E-value=1.3e-19 Score=191.57 Aligned_cols=188 Identities=15% Similarity=0.067 Sum_probs=152.9
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.+|++++..... ....
T Consensus 92 g~t~L~~A~~~--g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------~~~g 157 (285)
T 3d9h_A 92 HVSPLHEACLG--GHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP------------ESDL 157 (285)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC------------SCTT
T ss_pred CCCHHHHHHHC--CcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC------------CCCC
Confidence 47899887754 6778888899988876656678899999999 5888888899887642111 1125
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.+++++|++..++.+ ..+..|.||||+|+..|+.++|++||++ |+
T Consensus 158 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga------- 214 (285)
T 3d9h_A 158 ASPIHEAARRGHVECVNSLIAYGGNID---------HKISHLGTPLYLACENQQRACVKKLLES-------GA------- 214 (285)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCBTTTBCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHcCcHHHHHHHHHC-------CC-------
Confidence 789999999999999999999654321 1355688999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|. +..|.||||+|+. .|+.+++++|+++ ||+++.+|..|.||||+|+ ++.+++++|.+
T Consensus 215 ----------~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~------gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~ 274 (285)
T 3d9h_A 215 ----------DVNQ-GKGQDSPLHAVVR-TASEELACLLMDF------GADTQAKNAEGKRPVELVP--PESPLAQLFLE 274 (285)
T ss_dssp ----------CTTC-CBTTBCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCGGGGSC--TTSHHHHHHHH
T ss_pred ----------CCCC-CCCCCCHHHHHHH-cCCHHHHHHHHHC------CCCCCCcCCCCCCHHHHhc--CccHHHHHHHH
Confidence 6674 7899999999999 9999999999999 9999999999999999999 56789998888
Q ss_pred h-hhcCC
Q 002122 853 K-INKRP 858 (964)
Q Consensus 853 k-~ak~~ 858 (964)
+ +++..
T Consensus 275 ~~~a~l~ 281 (285)
T 3d9h_A 275 REGASLP 281 (285)
T ss_dssp HC-----
T ss_pred hhccCCC
Confidence 7 55543
No 57
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.80 E-value=2.7e-19 Score=170.10 Aligned_cols=150 Identities=23% Similarity=0.252 Sum_probs=122.4
Q ss_pred cccHHHH-HHHHHHHhhhhcccc-cccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCch
Q 002122 651 IDTKNQA-MDFIHEIGWLFHRSQ-SKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSL 728 (964)
Q Consensus 651 ~~~h~~a-l~fL~EIGWLLqr~~-~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~l 728 (964)
++++.+| .+.+..+.+++++.. ..... .....++||+ +..|+.++++.|++.+++.+.
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----------~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~-------- 63 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHRELVHPDAL-----------NRFGKTALQV-MMFGSTAIALELLKQGASPNV-------- 63 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCC-----------CTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC--------
T ss_pred hHHHHHHHhCCHHHHHHHHHhhCcCcccc-----------CCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC--------
Confidence 4566676 577788888887621 11111 1235789999 999999999999996543211
Q ss_pred hhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHH
Q 002122 729 DLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVL 808 (964)
Q Consensus 729 e~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV 808 (964)
.+..|.||||+|++.|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+.+++
T Consensus 64 -~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v 117 (156)
T 1bd8_A 64 -QDTSGTSPVHDAARTGFLDTLKVLVEH-------GA-----------------DVNVPDGTGALPIHLAVQ-EGHTAVV 117 (156)
T ss_dssp -CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CSCCCCTTSCCHHHHHHH-HTCHHHH
T ss_pred -cCCCCCCHHHHHHHcCcHHHHHHHHHc-------CC-----------------CCCCcCCCCCcHHHHHHH-hChHHHH
Confidence 245688999999999999999999999 77 889999999999999999 9999999
Q ss_pred HHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 002122 809 DALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 853 (964)
Q Consensus 809 ~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k 853 (964)
++|+++ ++++.+|..|.||||+|+..|+.+++++|.++
T Consensus 118 ~~Ll~~-------~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 118 SFLAAE-------SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHTT-------SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHhc-------cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999975 67889999999999999999999999999875
No 58
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.80 E-value=2.9e-19 Score=178.68 Aligned_cols=213 Identities=14% Similarity=0.081 Sum_probs=131.8
Q ss_pred cceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccch
Q 002122 616 FPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKW 694 (964)
Q Consensus 616 fP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~ 694 (964)
+|++.|. ..+.+..++.+++.+......+..|.+++|.++ .+.+..+.||++++....... .....+
T Consensus 11 ~~l~~A~--~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----------~~~~~t 78 (240)
T 3eu9_A 11 WDIVKAT--QYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG----------GDLNST 78 (240)
T ss_dssp CCHHHHH--HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB----------TTTTBC
T ss_pred hHHHHHH--HcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc----------CCcCCC
Confidence 4444433 336666677777766655444556677777776 366666777776654211111 011246
Q ss_pred HHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccccc
Q 002122 695 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 774 (964)
Q Consensus 695 lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~ 774 (964)
+||+|+..++.++++.|++..++... .+..|.||||+|+..|+.+++++|+++..+..... ....++++.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~ 148 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYGADPSL---------IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD-QNGMTPLMW 148 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHH
T ss_pred hhHHHHHcCCHHHHHHHHHcCCCCcc---------cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccC-CCCCcHHHH
Confidence 77777777777777777765432111 13346677777777777777777777622211000 001123322
Q ss_pred ccccc-----------cccCCCcCCC-CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcC
Q 002122 775 GVHKG-----------FLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRG 842 (964)
Q Consensus 775 ~a~~~-----------y~fdpn~~d~-~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rG 842 (964)
....+ +..+++..+. .|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+|
T Consensus 149 a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVL-AGNTTVISLLLEA------GANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp HHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHH-HTCHHHHHHHHHH------TCCTTCBCTTSCBHHHHHHHTT
T ss_pred HHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcC
Confidence 21111 0136676775 88899999998 8899999999988 8899999999999999999999
Q ss_pred CHHHHHHHHHhhhcC
Q 002122 843 HYSYIHLVQKKINKR 857 (964)
Q Consensus 843 h~svv~LL~~k~ak~ 857 (964)
+.+++++|.+++++.
T Consensus 222 ~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 222 NVWMINHLQEARQAK 236 (240)
T ss_dssp CHHHHHHHHHHC---
T ss_pred cHHHHHHHHHhhhcc
Confidence 999999888887654
No 59
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.80 E-value=4.8e-19 Score=170.23 Aligned_cols=127 Identities=24% Similarity=0.203 Sum_probs=112.8
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++|+.|+..|+.++++.|++... .+ ....+..|.||||+|+..|+.++|++|+++ |+
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~---~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 66 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQS---VN-----CRDIEGRQSTPLHFAAGYNRVSVVEYLLQH-------GA------ 66 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTT---TT-----CCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCC---CC-----ccccccCCCCHHHHHHHcChHHHHHHHHhc-------CC------
Confidence 4679999999999999999998421 11 112345588999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|.+|.||||+|+..|+.+++++|.
T Consensus 67 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 128 (165)
T 3twr_A 67 -----------DVHAKDKGGLVPLHNACS-YGHYEVAELLVKH------GAVVNVADLWKFTPLHEAAAKGKYEICKLLL 128 (165)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCccCCCCCCHHHHHHH-cCcHHHHHHHHhC------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 002122 852 KKINKR 857 (964)
Q Consensus 852 ~k~ak~ 857 (964)
+++++.
T Consensus 129 ~~ga~~ 134 (165)
T 3twr_A 129 QHGADP 134 (165)
T ss_dssp HTTCCT
T ss_pred HcCCCC
Confidence 987654
No 60
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.80 E-value=4.8e-19 Score=168.95 Aligned_cols=124 Identities=21% Similarity=0.141 Sum_probs=112.9
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++|+.|+..|+.++|+.|++...+.. .+..|.||||+|+..|+.++|++|++. |+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------- 58 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT----------TDWLGTSPLHLAAQYGHFSTTEVLLRA-------GV------- 58 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC----------CCTTCCCHHHHHHHHTCHHHHHHHHTT-------TC-------
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC----------cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 579999999999999999999654211 245688999999999999999999998 76
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+|+.+++++|.+
T Consensus 59 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 121 (153)
T 1awc_B 59 ----------SRDARTKVDRTPLHMAAS-EGHANIVEVLLKH------GADVNAKDMLKMTALHWATEHNHQEVVELLIK 121 (153)
T ss_dssp ----------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CCCCCCCCCCCHHHHHHH-cChHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 789999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcC
Q 002122 853 KINKR 857 (964)
Q Consensus 853 k~ak~ 857 (964)
++++.
T Consensus 122 ~ga~~ 126 (153)
T 1awc_B 122 YGADV 126 (153)
T ss_dssp TTCCT
T ss_pred cCCCc
Confidence 87654
No 61
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.80 E-value=7.2e-19 Score=182.57 Aligned_cols=159 Identities=15% Similarity=0.009 Sum_probs=132.7
Q ss_pred cCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCC
Q 002122 648 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 726 (964)
Q Consensus 648 ~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~ 726 (964)
+|.+++|.+| .+.+..+.+|++++......+ ....++||+|+..|+.++|+.|++.+++.+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------- 63 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIIT-----------ADHVSPLHEACLGGHLSCVKILLKHGAQVN------- 63 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCC-----------TTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-----------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-------
Confidence 4678999998 588889999998774322222 235789999999999999999999654321
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHH
Q 002122 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 806 (964)
Q Consensus 727 ~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~d 806 (964)
..+..|.||||+|+..|+.++|++|+++ |+ +++. +..|.||||+|+. .|+.+
T Consensus 64 --~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~-~~~g~t~L~~A~~-~~~~~ 115 (261)
T 2xai_A 64 --GVTADWHTPLFNACVSGSWDCVNLLLQH-------GA-----------------SVQP-ESDLASPIHEAAR-RGHVE 115 (261)
T ss_dssp --CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CSSC-SCTTCCHHHHHHH-TTCHH
T ss_pred --CCCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC-----------------CCCC-CCCCCCHHHHHHH-cCcHH
Confidence 1245688999999999999999999999 66 5553 4469999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 807 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
++++|+++ |++++.+|..|.||||+|+.+|+.+++++|.+++++..
T Consensus 116 ~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 116 CVNSLIAY------GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp HHHHHHHT------TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHHc------CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 99999999 99999999999999999999999999999999987653
No 62
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.79 E-value=1.8e-19 Score=187.32 Aligned_cols=178 Identities=17% Similarity=0.071 Sum_probs=131.4
Q ss_pred hhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHc---CchHHHHHHhhhhccCc
Q 002122 644 DVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDH---EWCAVVKKLLHILLDGT 719 (964)
Q Consensus 644 ~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~---g~~aVVk~LL~~l~d~~ 719 (964)
+.+..|.+++|.+| .+.+..+.+||+....... ...+ .....-....++||+|+.. |+.++|++||+.+++..
T Consensus 8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~--~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKK-RLTD--SEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCC-CTTS--GGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT
T ss_pred CCCcccchHHHHHHHcCCHHHHHHHHHHHhhccc-ccCC--cccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc
Confidence 34567888999998 4666666666653210000 0000 0001122457899999987 99999999999875422
Q ss_pred -----ccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCC-----
Q 002122 720 -----VSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGP----- 789 (964)
Q Consensus 720 -----vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~----- 789 (964)
++... ...+..|.||||+||+.|+.++|++||++ |+ ++|..+.
T Consensus 85 ~~~~~i~~~~---~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-------ga-----------------~~~~~~~~~~~~ 137 (273)
T 2pnn_A 85 SLKQFVNASY---TDSYYKGQTALHIAIERRNMTLVTLLVEN-------GA-----------------DVQAAANGDFFK 137 (273)
T ss_dssp CHHHHHTCCC---CSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCBCSGGGS
T ss_pred chhHHhhccc---ccccCCCCCHHHHHHHcCCHHHHHHHHHC-------CC-----------------CcCccccccccc
Confidence 11110 11245689999999999999999999999 66 5555554
Q ss_pred ---------CCChHHHHHHhhCCCHHHHHHhhc---CCCCCccccccccCCCCCCCHHHHHHHcCC---------HHHHH
Q 002122 790 ---------AGLTPIHIAAGKDGSEDVLDALTD---DPGMVGIEAWKNARDSSGSTPEDYARLRGH---------YSYIH 848 (964)
Q Consensus 790 ---------~G~TPLHiAA~~~G~~dVV~lLL~---~p~~vg~gAdinarD~~G~TPLh~A~~rGh---------~svv~ 848 (964)
.|.||||+|+. .|+.++|++|++ + |++++.+|..|.||||+|+..|+ .++++
T Consensus 138 ~~~~~~~~~~g~tpL~~A~~-~g~~~~v~~Ll~~~~~------gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~ 210 (273)
T 2pnn_A 138 KTKGRPGFYFGELPLSLAAC-TNQLAIVKFLLQNSWQ------PADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYN 210 (273)
T ss_dssp SCSSSCCCCSCBSHHHHHHH-TTCHHHHHHHHHCSSC------CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHH-cCCHHHHHHHHhcccC------CCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHH
Confidence 79999999999 999999999999 7 99999999999999999999998 89999
Q ss_pred HHHHhhhcCC
Q 002122 849 LVQKKINKRP 858 (964)
Q Consensus 849 LL~~k~ak~~ 858 (964)
+|.+++++..
T Consensus 211 ~Ll~~ga~~n 220 (273)
T 2pnn_A 211 EILILGAKLH 220 (273)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHhhhhcc
Confidence 9999987653
No 63
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.79 E-value=7.4e-19 Score=175.75 Aligned_cols=159 Identities=18% Similarity=0.149 Sum_probs=102.1
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
++.+.++++.++ .+.+..+.+|++++......+ ....++||+|+..|+.++|+.|++...+....
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--- 71 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPD-----------KENVTLLHWAAINNRIDLVKYYISKGAIVDQL--- 71 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC---
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCcCCCC-----------CCCCCHHHHHHHhCCHHHHHHHHHcCCcchhh---
Confidence 345678889988 588888999988774322221 23468999999999999999999976532211
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 804 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~ 804 (964)
....|.||||+|+..|+.+++++|+++ |+ +++..+..|.||||+|+. .|+
T Consensus 72 -----~~~~~~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~l~~A~~-~~~ 121 (240)
T 3eu9_A 72 -----GGDLNSTPLHWATRQGHLSMVVQLMKY-------GA-----------------DPSLIDGEGCSCIHLAAQ-FGH 121 (240)
T ss_dssp -----BTTTTBCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTC
T ss_pred -----cCCcCCChhHHHHHcCCHHHHHHHHHc-------CC-----------------CCcccCCCCCCHHHHHHH-cCH
Confidence 133478999999999999999999998 54 444444445555555554 455
Q ss_pred HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCC-HHHHHHHHHhh
Q 002122 805 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGH-YSYIHLVQKKI 854 (964)
Q Consensus 805 ~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh-~svv~LL~~k~ 854 (964)
.+++++|+++ +++++.+|..|.||||+|+.+++ .+++++|.+++
T Consensus 122 ~~~~~~Ll~~------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~ 166 (240)
T 3eu9_A 122 TSIVAYLIAK------GQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFN 166 (240)
T ss_dssp HHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTT
T ss_pred HHHHHHHHhc------CCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcC
Confidence 5555555544 44444444444444444443333 34444444443
No 64
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.79 E-value=6.8e-19 Score=170.32 Aligned_cols=126 Identities=17% Similarity=0.108 Sum_probs=112.0
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.++++.||+...+ .....+..|.||||+|++.|+.++|++||++ |+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------- 60 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDN--------LVNKPDERGFTPLIWASAFGEIETVRFLLEW-------GA------- 60 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSG--------GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH-------TC-------
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcc--------cccCCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 4589999999999999999985321 1111345689999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..+..|.||||+|+. .|+.+++++|+++ +++++.+|..|.||||+|+..|+.+++++|.+
T Consensus 61 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (172)
T 3v30_A 61 ----------DPHILAKERESALSLAST-GGYTDIVGLLLER------DVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123 (172)
T ss_dssp ----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CchhhcccCCCHHHHHHH-CCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 889999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcC
Q 002122 853 KINKR 857 (964)
Q Consensus 853 k~ak~ 857 (964)
++++.
T Consensus 124 ~ga~~ 128 (172)
T 3v30_A 124 RGADL 128 (172)
T ss_dssp TTCCT
T ss_pred cCCCc
Confidence 87654
No 65
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.79 E-value=3.5e-19 Score=192.53 Aligned_cols=199 Identities=14% Similarity=0.067 Sum_probs=163.9
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCcccc
Q 002122 614 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 692 (964)
Q Consensus 614 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~ 692 (964)
+..|+++|... +.+..++.+++.++.....+..|.+++|.+| .+.+..+.+|+.++.... ....
T Consensus 20 g~t~L~~Aa~~--g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-------------~~~g 84 (364)
T 3ljn_A 20 NMEKIHVAARK--GQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS-------------LWHG 84 (364)
T ss_dssp HHHHHHHHHHH--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC-------------CBTT
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc-------------ccCC
Confidence 47788887654 8889999999998877666778999999999 588888999998875111 1235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCC------C------CchhhccCCCcHHHHHHHcC--CHHHHHHHhccCC
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE------H------PSLDLALTELGLLHRAVRKN--SRPLVDLLLRFVP 758 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~------~------~~le~~l~G~TpLH~AVr~g--~~e~VelLL~~~p 758 (964)
.++||+|+..|+.++|++||+...+.+.+... . .....+..|.||||+|+..| +.++|++||++
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-- 162 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL-- 162 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH--
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc--
Confidence 78999999999999999999974331111000 0 00013556899999999999 99999999999
Q ss_pred CccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccc-----cccCCCCCCC
Q 002122 759 LEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAW-----KNARDSSGST 833 (964)
Q Consensus 759 ~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAd-----inarD~~G~T 833 (964)
|+ ++|..|..|.||||+|+. .|+.++|++|+++ +++ +|.+|..|.|
T Consensus 163 -----ga-----------------~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~------g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 163 -----GA-----------------SPTAKDKADETPLMRAME-FRNREALDLMMDT------VPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp -----TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHH------CSCSSSCCTTCCCTTCCC
T ss_pred -----CC-----------------CCcccCCCCCCHHHHHHH-cCCHHHHHHHHhc------ccccccccccccCCCCCc
Confidence 77 899999999999999999 9999999999998 888 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 834 PEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 834 PLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
|||+|+..||.+++++|.+++++..
T Consensus 214 ~L~~A~~~g~~~~v~~Ll~~gad~~ 238 (364)
T 3ljn_A 214 HLHWAILINWEDVAMRFVEMGIDVN 238 (364)
T ss_dssp TTHHHHTTTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999987643
No 66
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.79 E-value=7.9e-19 Score=171.63 Aligned_cols=127 Identities=23% Similarity=0.200 Sum_probs=112.1
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
+.++|+.|+..|+.++|+.||+... .+. ...+..|.||||+|+..|+.++|++||+. |+
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~---~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 63 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTE---NDL-----NQGDDHGFSPLHWACREGRSAVVEMLIMR-------GA------ 63 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTT---SCT-----TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCc---ccc-----cccCCCCCCHHHHHHHcCcHHHHHHHHHc-------CC------
Confidence 3568999999999999999998421 111 11355688999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 64 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 64 -----------RINVMNRGDDTPLHLAAS-HGHRDIVQKLLQY------KADINAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 002122 852 KKINKR 857 (964)
Q Consensus 852 ~k~ak~ 857 (964)
+++++.
T Consensus 126 ~~ga~~ 131 (179)
T 3f6q_A 126 ANGALV 131 (179)
T ss_dssp HTTCCS
T ss_pred HCCCCc
Confidence 988764
No 67
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.79 E-value=2.3e-19 Score=182.18 Aligned_cols=172 Identities=14% Similarity=-0.003 Sum_probs=131.9
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
+..|.+++|.+| .+.+..+.+|+...... ..+ ++ .......+|||+|+..|+.++|++||+.+++.+.
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~----~~~--~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---- 73 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGD----LAF--LN-FQNNLQQTPLHLAVITNQPEIAEALLGAGCDPEL---- 73 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC---------CCC--CC-CCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC----
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhcc----HHH--hh-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC----
Confidence 457889999998 46666677776654210 000 01 1222357899999999999999999986543211
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCC
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 804 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~ 804 (964)
.+..|.||||+|++.|+.++|++|++. |+. ..+....+..+..|.||||+|+. .|+
T Consensus 74 -----~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------~~~-----------~~~~~~~~~~~~~g~t~L~~A~~-~~~ 129 (236)
T 1ikn_D 74 -----RDFRGNTPLHLACEQGCLASVGVLTQS-------CTT-----------PHLHSILKATNYNGHTCLHLASI-HGY 129 (236)
T ss_dssp -----CCTTCCCHHHHHHHHTCHHHHHHHHHS-------TTT-----------TSSSCGGGCCCTTCCCHHHHHHH-TTC
T ss_pred -----cCCCCCCHHHHHHHcCCHHHHHHHHhc-------ccc-----------hhHHHHhhccCCCCCCHHHHHHH-cCC
Confidence 245689999999999999999999998 431 01111356788899999999999 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCC-CCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 805 EDVLDALTDDPGMVGIEAWKNARDS-SGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 805 ~dVV~lLL~~p~~vg~gAdinarD~-~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
.++|++|+++ |++++.+|. .|.||||+|+..|+.+++++|.+++++..
T Consensus 130 ~~~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 178 (236)
T 1ikn_D 130 LGIVELLVSL------GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN 178 (236)
T ss_dssp HHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC
T ss_pred HHHHHHHHHc------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999 999999998 99999999999999999999999987643
No 68
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.79 E-value=1.2e-18 Score=169.10 Aligned_cols=126 Identities=22% Similarity=0.216 Sum_probs=113.7
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++|+.|+..|+.++|+.|++.+++.+ ..+..|.||||+|++.|+.++|++|++. |+
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 71 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVN---------AEDASGWTPLHLAAFNGHLEIVEVLLKN-------GA------ 71 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 4679999999999999999999654321 1245688999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 72 -----------~~~~~~~~g~t~L~~A~~-~~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 133 (169)
T 2y1l_E 72 -----------DVNAVDHAGMTPLRLAAL-FGHLEIVEVLLKN------GADVNANDMEGHTPLHLAAMFGHLEIVEVLL 133 (169)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCccCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 788999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 002122 852 KKINKR 857 (964)
Q Consensus 852 ~k~ak~ 857 (964)
+++++.
T Consensus 134 ~~g~~~ 139 (169)
T 2y1l_E 134 KNGADV 139 (169)
T ss_dssp HTTCCT
T ss_pred HcCCCC
Confidence 987654
No 69
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.79 E-value=1.6e-18 Score=170.77 Aligned_cols=161 Identities=11% Similarity=-0.002 Sum_probs=133.1
Q ss_pred cCccccHHHH-HHHHHHHhhhhccccc-ccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCC
Q 002122 648 FGKIDTKNQA-MDFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEH 725 (964)
Q Consensus 648 ~g~~~~h~~a-l~fL~EIGWLLqr~~~-~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~ 725 (964)
.+.++++.+| .+.+..+.++|.+... .... .....++||+|+..|+.++|++||+.+++.+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----- 67 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEV-----------DTEGNTPLNIAVHNNDIEIAKALIDRGADINL----- 67 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCC-----------CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-----
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCC-----------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-----
Confidence 3567888888 5888888888877631 1111 12357899999999999999999996543221
Q ss_pred CchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCH
Q 002122 726 PSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSE 805 (964)
Q Consensus 726 ~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~ 805 (964)
.+..|.||||+|+..|+.+++++|++.. ++ +++..+..|.||||+|+. .|+.
T Consensus 68 ----~~~~g~t~l~~A~~~~~~~~~~~Ll~~~------~~-----------------~~~~~~~~g~t~L~~A~~-~~~~ 119 (201)
T 3hra_A 68 ----QNSISDSPYLYAGAQGRTEILAYMLKHA------TP-----------------DLNKHNRYGGNALIPAAE-KGHI 119 (201)
T ss_dssp ----CCTTSCCHHHHHHHTTCHHHHHHHHHHS------CC-----------------CTTCCCTTSCCSHHHHHH-TTCH
T ss_pred ----CCCCCCCHHHHHHHcCCHHHHHHHHhcc------Cc-----------------ccccccCCCCcHHHHHHH-cCCH
Confidence 2456889999999999999999999652 44 788899999999999999 9999
Q ss_pred HHHHHhhcCCCCCccc-cccccCCCCCCCHHHHHHHcCC-----HHHHHHHHHhhhcCC
Q 002122 806 DVLDALTDDPGMVGIE-AWKNARDSSGSTPEDYARLRGH-----YSYIHLVQKKINKRP 858 (964)
Q Consensus 806 dVV~lLL~~p~~vg~g-AdinarD~~G~TPLh~A~~rGh-----~svv~LL~~k~ak~~ 858 (964)
+++++|+++ + ++++.+|..|.||||+|+..++ .+++++|.+++++..
T Consensus 120 ~~v~~Ll~~------g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 120 DNVKLLLED------GREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS 172 (201)
T ss_dssp HHHHHHHHH------CCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHc------CCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC
Confidence 999999999 7 9999999999999999999988 999999999987643
No 70
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.79 E-value=2.1e-18 Score=182.11 Aligned_cols=207 Identities=16% Similarity=0.056 Sum_probs=150.2
Q ss_pred cceeecchhhhhHHHHHHHHhhh-cCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccc
Q 002122 616 FPFIVAEEDVCSEIRMLESALEF-NRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFK 693 (964)
Q Consensus 616 fP~LVad~~iCsEI~~LE~~le~-~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k 693 (964)
.|++.|.. .+.+..++.++.. +......+..|.+++|.+| .+.+..+.||++++......+ ....
T Consensus 26 ~~L~~A~~--~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~ 92 (351)
T 3utm_A 26 DELLEAAR--SGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKD-----------KGGL 92 (351)
T ss_dssp HHHHHHHH--HTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTCC
T ss_pred hhHHHHHH--cCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC-----------CCCC
Confidence 34444443 4677777777764 2332233567899999999 588999999998875322222 2357
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc----
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN---- 769 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~---- 769 (964)
+|||+|+..|+.++|++||+..++.+. .+..|.||||+|+..|+.++|++||++ |+.+..
T Consensus 93 t~L~~A~~~g~~~iv~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~ 156 (351)
T 3utm_A 93 VPLHNACSYGHYEVTELLLKHGACVNA---------MDLWQFTPLHEAASKNRVEVCSLLLSH-------GADPTLVNCH 156 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTT
T ss_pred cHHHHHHHCCCHHHHHHHHHCCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCccccCC
Confidence 899999999999999999996543221 245688999999999999999999998 442211
Q ss_pred --ccccccccc-------------------------------ccccCCCcCCCCCChHHHHHHhhC---CCHHHHHHhhc
Q 002122 770 --KALVDGVHK-------------------------------GFLFRPDVIGPAGLTPIHIAAGKD---GSEDVLDALTD 813 (964)
Q Consensus 770 --~~lv~~a~~-------------------------------~y~fdpn~~d~~G~TPLHiAA~~~---G~~dVV~lLL~ 813 (964)
+++...... .........+..|.||||+|+. . +..+++++|++
T Consensus 157 g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~-~~~~~~~~~~~~Ll~ 235 (351)
T 3utm_A 157 GKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVA-SLHPKRKQVAELLLR 235 (351)
T ss_dssp SCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHH-CCSTTHHHHHHHHHH
T ss_pred CCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHH-HhCccHHHHHHHHHH
Confidence 111000000 0000112345689999999999 7 55899999999
Q ss_pred CCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 814 DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 814 ~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+ |+++|.+|..|.||||+|+.+|+.+++++|.+++++..
T Consensus 236 ~------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n 274 (351)
T 3utm_A 236 K------GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN 274 (351)
T ss_dssp T------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred c------CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 9 99999999999999999999999999999999887543
No 71
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.79 E-value=6.4e-19 Score=173.82 Aligned_cols=126 Identities=17% Similarity=0.046 Sum_probs=114.1
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..|+.++++.|++...+.+. .+..|.||||+|++.|+.++|++|++. |+
T Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 92 (192)
T 2rfm_A 35 NRTPLMVACMLGMENAIDKLVENFDKLED---------KDIEGSTALIWAVKNNRLGIAEKLLSK-------GS------ 92 (192)
T ss_dssp CCCHHHHHHHHTCGGGHHHHHHHHCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHH-------TC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcccccc---------ccccCccHHHHHHHcCCHHHHHHHHHC-------CC------
Confidence 47899999999999999999997543211 244588999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
+++..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 93 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (192)
T 2rfm_A 93 -----------NVNTKDFSGKTPLMWSII-FGYSEMSYFLLEH------GANVNDRNLEGETPLIVASKYGRSEIVKKLL 154 (192)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred -----------CCCCCCCCCCcHHHHHHH-cCCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 789999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 002122 852 KKINKR 857 (964)
Q Consensus 852 ~k~ak~ 857 (964)
+++++.
T Consensus 155 ~~ga~~ 160 (192)
T 2rfm_A 155 ELGADI 160 (192)
T ss_dssp HTTCCT
T ss_pred HCCCCC
Confidence 987654
No 72
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.78 E-value=9.3e-19 Score=168.57 Aligned_cols=125 Identities=16% Similarity=0.156 Sum_probs=112.8
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.++++.||+...+ .. ..+..|.||||+|++.|+.++|++|++. |+
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~----~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------- 60 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENV----IN-----HTDEEGFTPLMWAAAHGQIAVVEFLLQN-------GA------- 60 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSC----TT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCC----cC-----CCCCCCCCHHHHHHHCCCHHHHHHHHHc-------CC-------
Confidence 5799999999999999999986432 11 1245688999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
+++..+..|.||||+|+. .|+.+++++|+++ +++++.+|..|.||||+|+..|+.+++++|.+
T Consensus 61 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (167)
T 3v31_A 61 ----------DPQLLGKGRESALSLACS-KGYTDIVKMLLDC------GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123 (167)
T ss_dssp ----------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHH------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CCCCcCCCCCcHHHHHHH-cCCHHHHHHHHHC------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 789999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcC
Q 002122 853 KINKR 857 (964)
Q Consensus 853 k~ak~ 857 (964)
++++.
T Consensus 124 ~g~~~ 128 (167)
T 3v31_A 124 SGADP 128 (167)
T ss_dssp TTCCT
T ss_pred cCCCC
Confidence 87654
No 73
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.78 E-value=2.5e-19 Score=184.36 Aligned_cols=159 Identities=17% Similarity=0.075 Sum_probs=114.0
Q ss_pred cCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCC
Q 002122 648 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 726 (964)
Q Consensus 648 ~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~ 726 (964)
.|.+++|.++ .+....+..++.++..... . ....++||+|+..|+.++|+.||+...+.+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-----------~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~------- 64 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKF-----------N-PLPLALLLDSSLEGEFDLVQRIIYEVDDPS------- 64 (239)
T ss_dssp ---------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC-------
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCccc-----------C-chhhHHHHHHHHcCCHHHHHHHHHcCCCCC-------
Confidence 4677787777 4666667777776632111 0 123679999999999999999998654321
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHH
Q 002122 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 806 (964)
Q Consensus 727 ~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~d 806 (964)
..+..|.||||+||..|+.++|++||++ |+ ++|.+|..|.||||+||. .|+.+
T Consensus 65 --~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga-----------------~~~~~d~~g~tpL~~A~~-~~~~~ 117 (239)
T 1ycs_B 65 --LPNDEGITALHNAVCAGHTEIVKFLVQF-------GV-----------------NVNAADSDGWTPLHCAAS-CNNVQ 117 (239)
T ss_dssp --CCCTTSCCHHHHHHHHTCHHHHHHHHHH-------TC-----------------CTTCCCTTCCCHHHHHHH-TTCHH
T ss_pred --CcCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCccCCCCCCHHHHHHH-cCCHH
Confidence 1245689999999999999999999999 77 899999999999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCC-CHHHHH--HHcCCHHHHHHHHHhhhcCC
Q 002122 807 VLDALTDDPGMVGIEAWKNARDSSGS-TPEDYA--RLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdinarD~~G~-TPLh~A--~~rGh~svv~LL~~k~ak~~ 858 (964)
+|++|+++ |++++.+|..|. ||||+| +..||.+++++|..++++..
T Consensus 118 ~v~~Ll~~------ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 118 VCKFLVES------GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp HHHHHHHT------TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHc------CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 99999999 999999998887 999999 78899999999999988754
No 74
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.78 E-value=4.1e-19 Score=169.50 Aligned_cols=125 Identities=20% Similarity=0.157 Sum_probs=112.1
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
.+.++|+.|+..|+.++++.||+..++.+ ..+..|.||||+|+. |+.++|++|++. |+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~---------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------g~----- 61 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVN---------AQNGFGRTALQVMKL-GNPEIARRLLLR-------GA----- 61 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTT---------CCCTTSCCHHHHCCS-SCHHHHHHHHHT-------TC-----
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCcc---------ccCccCccHHHHHHc-CcHHHHHHHHHc-------CC-----
Confidence 35789999999999999999998543211 124568899999999 999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|
T Consensus 62 ------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 122 (162)
T 1ihb_A 62 ------------NPDLKDRTGFAVIHDAAR-AGFLDTLQTLLEF------QADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122 (162)
T ss_dssp ------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 889999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHhhhc
Q 002122 851 QKKINK 856 (964)
Q Consensus 851 ~~k~ak 856 (964)
.+++++
T Consensus 123 l~~g~~ 128 (162)
T 1ihb_A 123 VKHTAS 128 (162)
T ss_dssp HHHSCC
T ss_pred HHccCC
Confidence 998765
No 75
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.78 E-value=5.5e-19 Score=181.60 Aligned_cols=134 Identities=19% Similarity=0.144 Sum_probs=112.0
Q ss_pred cchHHHHHH---HcCchHHHHHHhhhhccCccc---CCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCcccccc
Q 002122 692 FKWLIEFSM---DHEWCAVVKKLLHILLDGTVS---LGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRL 765 (964)
Q Consensus 692 ~k~lL~fAv---e~g~~aVVk~LL~~l~d~~vd---~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa 765 (964)
..++||+|+ ..|+.++|++||+.+++.... .+. .....+..|.||||+||..|+.++|++||++ |+
T Consensus 46 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga 117 (260)
T 3jxi_A 46 GKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINS-PFRDVYYRGQTALHIAIERRCKHYVELLVEK-------GA 117 (260)
T ss_dssp CCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC-CBCCSSEESBCHHHHHHHTTCHHHHHHHHHT-------TC
T ss_pred CCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcc-cccccccCCCCHHHHHHHcCCHHHHHHHHhC-------CC
Confidence 578999999 789999999999987542210 000 0011234688999999999999999999999 76
Q ss_pred CccccccccccccccccCCCcCC--------------CCCChHHHHHHhhCCCHHHHHHhhc---CCCCCccccccccCC
Q 002122 766 GSENKALVDGVHKGFLFRPDVIG--------------PAGLTPIHIAAGKDGSEDVLDALTD---DPGMVGIEAWKNARD 828 (964)
Q Consensus 766 ~~~~~~lv~~a~~~y~fdpn~~d--------------~~G~TPLHiAA~~~G~~dVV~lLL~---~p~~vg~gAdinarD 828 (964)
++|..+ ..|.||||+||. .|+.++|++|++ + |++++.+|
T Consensus 118 -----------------~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~-~g~~~~v~~Ll~~~~~------ga~~~~~d 173 (260)
T 3jxi_A 118 -----------------DVHAQARGRFFQPKDEGGYFYFGELPLSLAAC-TNQPHIVHYLTENGHK------QADLRRQD 173 (260)
T ss_dssp -----------------CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHH-TTCHHHHHHHHHCSSC------CCCTTCCC
T ss_pred -----------------CcCccccccccCcccccccccCCCCHHHHHHH-cCCHHHHHHHHhcccc------CCCCcccC
Confidence 566665 689999999999 999999999999 7 99999999
Q ss_pred CCCCCHHHHHHHcCC---------HHHHHHHHHhhhcC
Q 002122 829 SSGSTPEDYARLRGH---------YSYIHLVQKKINKR 857 (964)
Q Consensus 829 ~~G~TPLh~A~~rGh---------~svv~LL~~k~ak~ 857 (964)
..|.||||+|+..|+ .+++++|.+++++.
T Consensus 174 ~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 174 SRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp TTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 999999999999888 79999999998865
No 76
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.78 E-value=2e-18 Score=189.46 Aligned_cols=186 Identities=11% Similarity=0.055 Sum_probs=144.4
Q ss_pred HHhhhcCcchhhhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHh
Q 002122 634 SALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLL 712 (964)
Q Consensus 634 ~~le~~a~~~~~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL 712 (964)
.+++.+++....+..|.+++|.+| -+.+..+.+|++++......+ ....++||+|+..|+.++|++||
T Consensus 151 ~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll 219 (373)
T 2fo1_E 151 ECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYN-----------KSERSALHQAAANRDFGMMVYML 219 (373)
T ss_dssp HHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-----------TTCCCHHHHHHHTTCHHHHHHHT
T ss_pred HHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccC-----------CCCCCHHHHHHHCCCHHHHHHHH
Confidence 345677766655678999999999 588888999998875332222 23478999999999999999999
Q ss_pred hhhccCcccCCCCCchhhccCCCcHHHHHHHcC---CHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCC
Q 002122 713 HILLDGTVSLGEHPSLDLALTELGLLHRAVRKN---SRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGP 789 (964)
Q Consensus 713 ~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g---~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~ 789 (964)
+..... .+.. ..+..|.||||+|+..+ +.++|++|+++ |+.... ......+..+.
T Consensus 220 ~~~~~~-~~~~-----~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~-------g~~~~~---------~~~~~~~~~d~ 277 (373)
T 2fo1_E 220 NSTKLK-GDIE-----ELDRNGMTALMIVAHNEGRDQVASAKLLVEK-------GAKVDY---------DGAARKDSEKY 277 (373)
T ss_dssp TSHHHH-HTTS-----CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH-------TCCSSC---------CSGGGTSSSSC
T ss_pred hcCccc-cChh-----hcCCCCCCHHHHHHHhCCcchHHHHHHHHHC-------CCCccc---------ccccccCcccc
Confidence 854100 1111 12456899999999998 89999999999 551100 00012345788
Q ss_pred CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 790 AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 790 ~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
.|.||||+||. .|+.++|++|+++. ++++|.+|..|.||||+|+.+|+.+++++|.+++++..
T Consensus 278 ~g~t~Lh~A~~-~g~~~~v~~Ll~~~-----~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~ 340 (373)
T 2fo1_E 278 KGRTALHYAAQ-VSNMPIVKYLVGEK-----GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE 340 (373)
T ss_dssp CCCCTHHHHHS-SCCHHHHHHHHHHS-----CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred cCCCHHHHHHH-hCCHHHHHHHHHhc-----CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 99999999999 99999999999871 49999999999999999999999999999999887643
No 77
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.77 E-value=1.5e-19 Score=169.34 Aligned_cols=126 Identities=25% Similarity=0.220 Sum_probs=108.3
Q ss_pred cccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc
Q 002122 690 RRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 690 ~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~ 769 (964)
....++||+|+..|+.++++.||+..++.+ ..+..|.||||+|+..|+.+++++|+++ |+
T Consensus 8 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~---- 67 (137)
T 3c5r_A 8 HRGETLLHIASIKGDIPSVEYLLQNGSDPN---------VKDHAGWTPLHEACNHGHLKVVELLLQH-------KA---- 67 (137)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSC---------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------cCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC----
Confidence 345789999999999999999999654321 1245689999999999999999999999 77
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
+++.+|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..++.+++++
T Consensus 68 -------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~l~~ 127 (137)
T 3c5r_A 68 -------------LVNTTGYQNDSPLHDAAK-NGHVDIVKLLLSY------GASRNAVNIFGLRPVDYTDDESMKSLLLL 127 (137)
T ss_dssp -------------CTTCCCGGGCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCGGGGCCCHHHHHHHSC
T ss_pred -------------cccCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHhhccHHHHHhh
Confidence 788999999999999999 9999999999999 99999999999999999999999888888
Q ss_pred HHHhhh
Q 002122 850 VQKKIN 855 (964)
Q Consensus 850 L~~k~a 855 (964)
|.+...
T Consensus 128 l~~~~~ 133 (137)
T 3c5r_A 128 PEKNES 133 (137)
T ss_dssp C-----
T ss_pred cccccc
Confidence 776543
No 78
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.77 E-value=5.2e-18 Score=181.51 Aligned_cols=177 Identities=15% Similarity=0.046 Sum_probs=130.1
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhh-hccCcc-cC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHI-LLDGTV-SL 722 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~-l~d~~v-d~ 722 (964)
+..|.+++|.++ .+.+..+.+++.++........... ..........+|||+|+.+|+.++|++||+. +++.+. +.
T Consensus 122 d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~-~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~ 200 (337)
T 4g8k_A 122 DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE-DQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN 200 (337)
T ss_dssp CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC------CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCT
T ss_pred ccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccc-ccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCC
Confidence 456788999988 4777778888887754332221110 0112223457899999999999999999964 333221 00
Q ss_pred -CC-----------C---------------CchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccc
Q 002122 723 -GE-----------H---------------PSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDG 775 (964)
Q Consensus 723 -g~-----------~---------------~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~ 775 (964)
|. . +....+..|.||||+|++.|+.++|++|+... |+
T Consensus 201 ~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~------~~---------- 264 (337)
T 4g8k_A 201 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE------HI---------- 264 (337)
T ss_dssp TSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTST------TC----------
T ss_pred CCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhc------CC----------
Confidence 00 0 00011345779999999999999999888762 44
Q ss_pred cccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 002122 776 VHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 855 (964)
Q Consensus 776 a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~a 855 (964)
++|.+|..|+||||+|+. .|+.+||++|+++ ||++|.+ ||||+|+.+||.++|++|+++++
T Consensus 265 -------~vn~~d~~G~TpL~~A~~-~g~~~iv~~Ll~~------GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA 325 (337)
T 4g8k_A 265 -------EINDTDSDGKTALLLAVE-LKLKKIAELLCKR------GASTDCG-----DLVMTARRNYDHSLVKVLLSHGA 325 (337)
T ss_dssp -------CTTCBCTTSCBHHHHHHH-TTCHHHHHHHHTT------SCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTC
T ss_pred -------cccCcCCCCCCHHHHHHH-cCCHHHHHHHHHC------CCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcC
Confidence 889999999999999999 9999999999999 9998765 59999999999999999999998
Q ss_pred cCC
Q 002122 856 KRP 858 (964)
Q Consensus 856 k~~ 858 (964)
+..
T Consensus 326 ~~d 328 (337)
T 4g8k_A 326 KED 328 (337)
T ss_dssp CC-
T ss_pred CCC
Confidence 754
No 79
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=1.6e-18 Score=152.88 Aligned_cols=92 Identities=30% Similarity=0.373 Sum_probs=87.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhc
Q 002122 734 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 813 (964)
Q Consensus 734 G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~ 813 (964)
|+||||+|++.|+.++|++|++. |+ ++|.+|..|.||||+|+. .|+.+++++|++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~n~~d~~g~t~L~~A~~-~~~~~~v~~Ll~ 56 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEA-------GA-----------------DVNAKDKNGRTPLHLAAR-NGHLEVVKLLLE 56 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCcccCCCCCCHHHHHHH-cCCHHHHHHHHH
Confidence 78999999999999999999999 77 889999999999999999 999999999999
Q ss_pred CCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 002122 814 DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINK 856 (964)
Q Consensus 814 ~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak 856 (964)
+ |++++.+|..|.||||+|+..|+.+++++|.+++++
T Consensus 57 ~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 57 A------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp T------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred c------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9 999999999999999999999999999999998763
No 80
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.77 E-value=2e-18 Score=159.17 Aligned_cols=116 Identities=16% Similarity=0.067 Sum_probs=101.2
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..|+.++++.|++...+.+ ..+..|.||||+|+..++.++|++|+++ |+
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 64 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDVN---------RTLEGGRKPLHYAADCGQLEILEFLLLK-------GA------ 64 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTT---------SCCTTSSCHHHHHHHTTCHHHHHHHHTT-------TC------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcC---------ccCCCCCcHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 4689999999999999999999654311 1345689999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|.+|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|. +..+.++|
T Consensus 65 -----------~~~~~d~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~---~~~~~~ll 122 (123)
T 3aaa_C 65 -----------DINAPDKHHITPLLSAVY-EGHVSCVKLLLSK------GADKTVKGPDGLTAFEATD---NQAIKALL 122 (123)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHCC---CHHHHHHH
T ss_pred -----------CCCcCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHhC---CHHHHHHh
Confidence 889999999999999999 9999999999999 9999999999999999994 44555544
No 81
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.77 E-value=2.3e-18 Score=163.63 Aligned_cols=122 Identities=24% Similarity=0.225 Sum_probs=109.1
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++|++|+..|+.++++.||+. . ..+.. ..+..|.||||+ +..|+.++|++|+++ |+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~--~~~~~-----~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-------g~------ 59 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-E--LVHPD-----ALNRFGKTALQV-MMFGSTAIALELLKQ-------GA------ 59 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-T--CCCTT-----CCCTTSCCHHHH-SCTTCHHHHHHHHHT-------TC------
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-h--CcCcc-----ccCCCCCcHHHH-HHcCCHHHHHHHHHC-------CC------
Confidence 46799999999999999999985 2 11111 134568999999 999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 60 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 121 (156)
T 1bd8_A 60 -----------SPNVQDTSGTSPVHDAAR-TGFLDTLKVLVEH------GADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121 (156)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred -----------CCCCcCCCCCCHHHHHHH-cCcHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHHhChHHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred Hh
Q 002122 852 KK 853 (964)
Q Consensus 852 ~k 853 (964)
++
T Consensus 122 ~~ 123 (156)
T 1bd8_A 122 AE 123 (156)
T ss_dssp TT
T ss_pred hc
Confidence 87
No 82
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=6e-18 Score=180.15 Aligned_cols=139 Identities=22% Similarity=0.165 Sum_probs=117.7
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHc---CCHHHHHHHhccCCCccccccCccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~---g~~e~VelLL~~~p~~~~dGa~~~~ 769 (964)
-..|+.|+..+....++.|++.+++..... .....+..|.||||+||+. ++.++|++||++ |+
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~---~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-------ga---- 196 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKI---PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-------SG---- 196 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBC---CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-------CS----
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhc---cccccccCCCCcchHHHHhcccchHHHHHHHHHC-------CC----
Confidence 358999999999999999998655422110 0011245689999999999 899999999999 88
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
++|.+|..|.||||+||. .|+.++|++|+++ ||+++.+|..|.||||+|+..||.+++++
T Consensus 197 -------------~in~~d~~g~TpLh~A~~-~g~~~~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~ 256 (278)
T 1dcq_A 197 -------------NLDKQTGKGSTALHYCCL-TDNAECLKLLLRG------KASIEIANESGETPLDIAKRLKHEHCEEL 256 (278)
T ss_dssp -------------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred -------------CccccCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCccCCCCCHHHHHHHcCCHHHHHH
Confidence 899999999999999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCceee
Q 002122 850 VQKKINKRPNGGHVVVD 866 (964)
Q Consensus 850 L~~k~ak~~~~~~v~v~ 866 (964)
|.++++... ..+..+.
T Consensus 257 Ll~~ga~~~-~~~~~v~ 272 (278)
T 1dcq_A 257 LTQALSGRF-NSHVHVE 272 (278)
T ss_dssp HHHHHTTCC-CSSCCCC
T ss_pred HHHcCCCCC-Ccceeee
Confidence 999998765 4444443
No 83
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.76 E-value=3.2e-18 Score=181.17 Aligned_cols=158 Identities=16% Similarity=0.073 Sum_probs=134.3
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
+..|.+++|.+| .+.+..+.+|+.++...... ...+|||+|+..|+.++|++||+.+++.+.
T Consensus 28 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-------------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~---- 90 (285)
T 3kea_A 28 DVHGHSASYYAIADNNVRLVCTLLNAGALKNLL-------------ENEFPLHQAATLEDTKIVKILLFSGLDDSQ---- 90 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC-------------TTCCHHHHHTTSSSCHHHHHHHHTTCCTTC----
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC-------------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----
Confidence 567899999999 58888899999887432211 147899999999999999999996543211
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCC-ChHHHHHHhhCC
Q 002122 725 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAG-LTPIHIAAGKDG 803 (964)
Q Consensus 725 ~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G-~TPLHiAA~~~G 803 (964)
.+..|.||||+|+..|+.++|++||++ |+ +++..+..| .||||+|+. .|
T Consensus 91 -----~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga-----------------~~~~~~~~g~~t~L~~A~~-~~ 140 (285)
T 3kea_A 91 -----FDDKGNTALYYAVDSGNMQTVKLFVKK-------NW-----------------RLMFYGKTGWKTSFYHAVM-LN 140 (285)
T ss_dssp -----CCTTSCCHHHHHHHTTCHHHHHHHHHH-------CG-----------------GGGGCSSSGGGSHHHHHHH-TT
T ss_pred -----cCCCCCcHHHHHHHcCCHHHHHHHHhc-------CC-----------------CCCccCCCCCCCHHHHHHH-cC
Confidence 245689999999999999999999999 77 889999999 899999999 99
Q ss_pred CHHHHHHhhcCCCCCccccccccCCC-CCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 804 SEDVLDALTDDPGMVGIEAWKNARDS-SGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 804 ~~dVV~lLL~~p~~vg~gAdinarD~-~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
+.+++++|+++ +++. .|. .|.||||+|+..|+.+++++|.+++++..
T Consensus 141 ~~~~v~~Ll~~------g~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n 188 (285)
T 3kea_A 141 DVSIVSYFLSE------IPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTN 188 (285)
T ss_dssp CHHHHHHHHTT------SCTT--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHhC------CCcc--ccccCCccHHHHHHHcChHHHHHHHHHcCCCCC
Confidence 99999999999 7766 343 89999999999999999999999987654
No 84
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.74 E-value=2.9e-18 Score=176.95 Aligned_cols=127 Identities=19% Similarity=0.100 Sum_probs=114.5
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..|+.++|+.||+.+++.+. .+..|.||||+||..|+.++|++||++ |+
T Consensus 21 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---------~d~~g~tpLh~A~~~g~~~~v~~Ll~~-------ga------ 78 (229)
T 2vge_A 21 PLVLLLDAALTGELEVVQQAVKEMNDPSQ---------PNEEGITALHNAICGANYSIVDFLITA-------GA------ 78 (229)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHSSCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred hhHHHHHHHHcCCHHHHHHHHhcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC------
Confidence 35789999999999999999996543211 345689999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCC-CCCCCHHHHH--HHcCCHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARD-SSGSTPEDYA--RLRGHYSYIH 848 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD-~~G~TPLh~A--~~rGh~svv~ 848 (964)
++|..|..|.||||+|+. .|+.++|++|+++ |++++.+| ..|.||||+| +..|+.++++
T Consensus 79 -----------~~n~~d~~g~tpLh~A~~-~g~~~~v~~Ll~~------ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~ 140 (229)
T 2vge_A 79 -----------NVNSPDSHGWTPLHCAAS-CNDTVICMALVQH------GAAIFATTLSDGATAFEKCDPYREGYADCAT 140 (229)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHTT------TCCTTCCCSSTTCCTGGGCCTTSTTHHHHHH
T ss_pred -----------CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCcccccCCCCCCHHHHHHHHhcChHHHHH
Confidence 899999999999999999 9999999999999 99999997 6999999999 9999999999
Q ss_pred HHHHhhhcCC
Q 002122 849 LVQKKINKRP 858 (964)
Q Consensus 849 LL~~k~ak~~ 858 (964)
+|.+++++..
T Consensus 141 ~Ll~~ga~~~ 150 (229)
T 2vge_A 141 YLADVEQSMG 150 (229)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHcCCCcc
Confidence 9999988754
No 85
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.74 E-value=6.1e-18 Score=182.63 Aligned_cols=184 Identities=15% Similarity=-0.016 Sum_probs=132.8
Q ss_pred hHHHHHHHHhhhcCcchhhh-----------------hcCccccHHHHHHHHHHHhhhhcc-cccccccCCCCCCCCCcC
Q 002122 627 SEIRMLESALEFNRTDADVE-----------------RFGKIDTKNQAMDFIHEIGWLFHR-SQSKSRLGHLDPNTDLFP 688 (964)
Q Consensus 627 sEI~~LE~~le~~a~~~~~~-----------------e~g~~~~h~~al~fL~EIGWLLqr-~~~~~~~~~~d~~l~l~q 688 (964)
..+..++.+++.+....... .......|.++.+.+.++.-+|-. +..... ..
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~----------~~ 127 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNI----------PV 127 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCCSCS----------CC
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCccc----------cc
Confidence 78888898888776543210 001111244556666666644433 321111 01
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCC---HHHHHHHhccCCCcccccc
Q 002122 689 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNS---RPLVDLLLRFVPLEVSDRL 765 (964)
Q Consensus 689 l~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~---~e~VelLL~~~p~~~~dGa 765 (964)
-....+|||+|+..|+.++|++||+.+++.+ ..+..|.||||+|+..|+ .++++.||++ +.
T Consensus 128 d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n---------~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~-------~~ 191 (327)
T 1sw6_A 128 DEHGNTPLHWLTSIANLELVKHLVKHGSNRL---------YGDNMGESCLVKAVKSVNNYDSGTFEALLDY-------LY 191 (327)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---------BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHH-------HG
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHhcccccHHHHHHHHHh-------hh
Confidence 2245789999999999999999999754322 135569999999999998 6888888888 42
Q ss_pred CccccccccccccccccCCCcCCCCCChHHHHHHhh---CCCHHHHHHhhcCCCCCcccc--------------------
Q 002122 766 GSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGK---DGSEDVLDALTDDPGMVGIEA-------------------- 822 (964)
Q Consensus 766 ~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~---~G~~dVV~lLL~~p~~vg~gA-------------------- 822 (964)
. ++|.+|..|+||||+|+.. .|+.+++++|++. ++
T Consensus 192 ~----------------~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~------~~~~~~~~~~~~i~~~~~~~g~ 249 (327)
T 1sw6_A 192 P----------------CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI------LMGWIVKKQNRPIQSGTNEKES 249 (327)
T ss_dssp G----------------GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH------HHHHHHHGGGCCEEEC------
T ss_pred c----------------cccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH------HHHHHhcccchHHHhhhhcccC
Confidence 1 6788999999999999963 6899999999876 32
Q ss_pred -------------------------ccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 823 -------------------------WKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 823 -------------------------dinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
++|.+|..|.||||+|+.+||.+++++|.+++++..
T Consensus 250 ~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 250 KPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF 310 (327)
T ss_dssp ----------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT
T ss_pred CcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 588999999999999999999999999999988653
No 86
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.74 E-value=4.4e-18 Score=167.89 Aligned_cols=110 Identities=23% Similarity=0.139 Sum_probs=97.8
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..|+.++++.||+ ..+ .+. .+..|.||||+|+..|+.++|++||++ |+
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~----~~~-----~d~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga----- 100 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRD----VDA-----VDENGRTALLFVAGLGSDKCVRLLAEA-------GA----- 100 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSC----TTC-----CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCC----CCC-----cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 34789999999999999999998 332 111 245689999999999999999999999 77
Q ss_pred ccccccccccccCCCcCC-CCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHc
Q 002122 771 ALVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLR 841 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d-~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~r 841 (964)
++|..+ ..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..
T Consensus 101 ------------~~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 101 ------------DLDHRDMRGGLTALHMAAG-YVRPEVVEALVEL------GADIEVEDERGLTALELAREI 153 (183)
T ss_dssp ------------CTTCCCSSSSCCHHHHHHH-TTCHHHHHHHHHH------TCCTTCCCTTSCCHHHHHHHH
T ss_pred ------------CCCcCCCCCCCCHHHHHHh-cCcHHHHHHHHHc------CCCCcCCCCCCCCHHHHHHHh
Confidence 788888 899999999999 9999999999999 999999999999999999876
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.74 E-value=2.5e-18 Score=173.01 Aligned_cols=127 Identities=8% Similarity=-0.063 Sum_probs=110.1
Q ss_pred cchHHHHHHHcCch----HHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCC------HHHHHHHhccCCCcc
Q 002122 692 FKWLIEFSMDHEWC----AVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNS------RPLVDLLLRFVPLEV 761 (964)
Q Consensus 692 ~k~lL~fAve~g~~----aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~------~e~VelLL~~~p~~~ 761 (964)
.++|||+|+.+++. ++|++||+.+++.+. .+..|+||||+|+..++ .++|++||++
T Consensus 38 g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~---------~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~----- 103 (186)
T 3t8k_A 38 KSNILYDVLRNNNDEARYKISMFLINKGADIKS---------RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK----- 103 (186)
T ss_dssp TTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC---------CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT-----
T ss_pred CCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC---------CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC-----
Confidence 57899999999975 489999996654221 24569999999999987 6889999999
Q ss_pred ccccCccccccccccccccccCCCcCCCCCC-hHHHHHHhhCCC-----HHHHHHhhc-CCCCCccccccccCCCCCCCH
Q 002122 762 SDRLGSENKALVDGVHKGFLFRPDVIGPAGL-TPIHIAAGKDGS-----EDVLDALTD-DPGMVGIEAWKNARDSSGSTP 834 (964)
Q Consensus 762 ~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~-TPLHiAA~~~G~-----~dVV~lLL~-~p~~vg~gAdinarD~~G~TP 834 (964)
|+ ++|.+|..|. ||||+|+. .+. .+++++|++ + ||+++.+|..|.||
T Consensus 104 --Ga-----------------din~~d~~g~ttpLh~A~~-~~~~~~~~~~iv~~Ll~~~------gad~~~~d~~G~Tp 157 (186)
T 3t8k_A 104 --GA-----------------DITALYKPYKIVVFKNIFN-YFVDENEMIPLYKLIFSQS------GLQLLIKDKWGLTA 157 (186)
T ss_dssp --TC-----------------CSSSCBGGGTBCTTGGGGG-CCSCHHHHHHHHHHHHTST------TCCTTCCCTTSCCH
T ss_pred --CC-----------------CCCccCCCcCchHHHHHHH-cCCChhhHHHHHHHHHHhc------CCCCcccCCCCCCH
Confidence 88 9999999999 99999998 554 469999999 8 99999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 835 EDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 835 Lh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
||+|+..|+.+++++|...+.+..
T Consensus 158 L~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 158 LEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHh
Confidence 999999999999999998776543
No 88
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.74 E-value=8.4e-18 Score=177.40 Aligned_cols=161 Identities=19% Similarity=0.112 Sum_probs=128.2
Q ss_pred CccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
.+..+|.++ .+.+..+..++.+.... ..+.. -....+|||+|+..|+.++|+.||+.+.. +.
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~-~~n~~--------d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~---~~----- 138 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDY-VVNIA--------DSNGNTALHYSVSHANFPVVQQLLDSGVC---KV----- 138 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHH-HHTCC--------CTTSCCHHHHHHHTTCHHHHHHHHHTSCC---CT-----
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhh-cCcCC--------CCCCCCHHHHHHHCCCHHHHHHHHHCCCC---cC-----
Confidence 455667776 47777777776553210 01111 12357899999999999999999996431 11
Q ss_pred hhhccCCCcHHHHHH-----HcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhC
Q 002122 728 LDLALTELGLLHRAV-----RKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKD 802 (964)
Q Consensus 728 le~~l~G~TpLH~AV-----r~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~ 802 (964)
...+..|.||||+|+ ..++.+++++|++. |+ .++..+..|.||||+||. .
T Consensus 139 ~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~tpLh~A~~-~ 193 (276)
T 4hbd_A 139 DKQNRAGYSPIMLTALATLKTQDDIETVLQLFRL-------GN-----------------INAKASQAGQTALMLAVS-H 193 (276)
T ss_dssp TCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHH-------SC-----------------TTCCCTTTCCCHHHHHHH-T
T ss_pred CCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHc-------CC-----------------CccccCCCCCCHHHHHHH-c
Confidence 113556899999999 77899999999999 66 677888899999999999 9
Q ss_pred CCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH-hhhcC
Q 002122 803 GSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK-KINKR 857 (964)
Q Consensus 803 G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~-k~ak~ 857 (964)
|+.++|++|+++ ||++|.+|.+|.||||+|+.+|+.+++++|.+ ++++.
T Consensus 194 g~~~~v~~Ll~~------gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~ 243 (276)
T 4hbd_A 194 GRVDVVKALLAC------EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI 243 (276)
T ss_dssp TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT
T ss_pred CCHHHHHHHHhC------CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC
Confidence 999999999999 99999999999999999999999999999998 66543
No 89
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.74 E-value=3.1e-18 Score=176.15 Aligned_cols=126 Identities=16% Similarity=0.062 Sum_probs=89.8
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||.|+..+..++++.||+.+++.+. ...++||||.|++.|+.++|++||+. |+
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~~----------~~~~~t~L~~A~~~g~~~~v~~Ll~~-------g~------ 61 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVKF----------NPLPLALLLDSSLEGEFDLVQRIIYE-------VD------ 61 (239)
T ss_dssp ------------------------------------------CHHHHHHHHHHTCHHHHHHHTST-------TS------
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCccc----------CchhhHHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 46799999999999999999996554221 23478999999999999999999999 77
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..|..|.||||+||. .|+.++|++|+++ |+++|.+|..|.||||+|+..||.+++++|.
T Consensus 62 -----------~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~------ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 123 (239)
T 1ycs_B 62 -----------DPSLPNDEGITALHNAVC-AGHTEIVKFLVQF------GVNVNAADSDGWTPLHCAASCNNVQVCKFLV 123 (239)
T ss_dssp -----------SCCCCCTTSCCHHHHHHH-HTCHHHHHHHHHH------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcCC
Q 002122 852 KKINKRP 858 (964)
Q Consensus 852 ~k~ak~~ 858 (964)
+++++..
T Consensus 124 ~~ga~~~ 130 (239)
T 1ycs_B 124 ESGAAVF 130 (239)
T ss_dssp HTTCCTT
T ss_pred HcCCCcc
Confidence 9987654
No 90
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.74 E-value=2.1e-18 Score=174.20 Aligned_cols=127 Identities=17% Similarity=0.103 Sum_probs=105.5
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
.++||+|+..|+.++|+.||+..++.+ ..+..|.||||+||..|+.++|++||+.. |+
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~------g~------- 131 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRVGVN---------GLDKAGSTALYWACHGGHKDIVEMLFTQP------NI------- 131 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHTTST------TC-------
T ss_pred ccccccccccCcHHHHHHHHhCCCCcc---------ccCCCCCCHHHHHHHcCCHHHHHHHHcCC------CC-------
Confidence 679999999999999999999654321 12456899999999999999999999872 45
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 852 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~ 852 (964)
++|..|..|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+..|+.+++++|..
T Consensus 132 ----------~~~~~d~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~ 194 (222)
T 3ehr_A 132 ----------ELNQQNKLGDTALHAAAW-KGYADIVQLLLAK------GARTDLRNIEKKLAFDMATNAACASLLKKKQG 194 (222)
T ss_dssp ----------CCCCCCTTSCCHHHHHHH-HTCHHHHHHHHHH------TCCSCCCCTTSCCHHHHCCSHHHHHHHC----
T ss_pred ----------CccccCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCccccCCCCCHHHHhcchhHHHHHHHHhc
Confidence 789999999999999999 9999999999999 99999999999999999999999999999988
Q ss_pred hhhcCC
Q 002122 853 KINKRP 858 (964)
Q Consensus 853 k~ak~~ 858 (964)
+++...
T Consensus 195 ~~~~~~ 200 (222)
T 3ehr_A 195 TDAVRT 200 (222)
T ss_dssp ------
T ss_pred cchhhh
Confidence 876543
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.73 E-value=9.3e-18 Score=173.99 Aligned_cols=124 Identities=22% Similarity=0.158 Sum_probs=109.7
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 692 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 692 ~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
..++||+|+..|+.++|+.||+ ..+ .+ ..+..|.||||+|+..|+.++|++||++ |+
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~~~----~~-----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga------ 101 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-DRD----VD-----AVDENGRTALLFVAGLGSDKCVRLLAEA-------GA------ 101 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-TCC----TT-----CBCTTSCBHHHHHHHHTCHHHHHHHHHT-------TC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-CCC----CC-----CcCCCCCCHHHHHHHCCCHHHHHHHHHc-------CC------
Confidence 4689999999999999999998 332 11 1345689999999999999999999999 77
Q ss_pred cccccccccccCCCcCC-CCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHH-----------
Q 002122 772 LVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYAR----------- 839 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d-~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~----------- 839 (964)
++|..+ ..|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+
T Consensus 102 -----------~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~ 163 (244)
T 3ui2_A 102 -----------DLDHRDMRGGLTALHMAAG-YVRPEVVEALVEL------GADIEVEDERGLTALELAREILKTTPKGNP 163 (244)
T ss_dssp -----------CTTCCCSSSCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHHHTTCCCSSH
T ss_pred -----------CCCcCCCCCCCCHHHHHHH-cCCHHHHHHHHHC------CCCCCCCCCCCCcHHHHHHHHHhccCCCCH
Confidence 888888 789999999999 9999999999999 9999999999999999998
Q ss_pred -----HcCCHHHHHHHHHhhhc
Q 002122 840 -----LRGHYSYIHLVQKKINK 856 (964)
Q Consensus 840 -----~rGh~svv~LL~~k~ak 856 (964)
..||.+++++|.++...
T Consensus 164 l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 164 MQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHcChHHHHHHHHHhccc
Confidence 66899999999987543
No 92
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.73 E-value=1.4e-17 Score=190.62 Aligned_cols=131 Identities=24% Similarity=0.159 Sum_probs=114.0
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHH---cCCHHHHHHHhccCCCccccccCcccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVR---KNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr---~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
..|+.|+..|+.++|+.||+.+++.+.... ....+..|.||||+||+ .|+.++|++||++ |+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~---~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-------ga----- 198 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLP---GPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-------GG----- 198 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBC---CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH-------SC-----
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCC---CcccccccchHHHHHHHhcccccHHHHHHHHHc-------CC-----
Confidence 579999999999999999997665332111 11124568999999977 8999999999999 88
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 850 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL 850 (964)
++|.+|..|+||||+||. .|+.++|++|+++ ||++|++|.+|.||||+|+..||.+++++|
T Consensus 199 ------------~vn~~d~~g~TpLh~A~~-~g~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 259 (497)
T 3lvq_E 199 ------------HLDAKAADGNTALHYAAL-YNQPDCLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEELL 259 (497)
T ss_dssp ------------CTTCCCSSSCCHHHHHTT-TTCHHHHHHHHHT------CCCCSCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCccCCCCCcHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 899999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHhhhcCC
Q 002122 851 QKKINKRP 858 (964)
Q Consensus 851 ~~k~ak~~ 858 (964)
.+++++..
T Consensus 260 l~~ga~~~ 267 (497)
T 3lvq_E 260 EQAQAGTF 267 (497)
T ss_dssp HHTCC---
T ss_pred HHhCCCCC
Confidence 99998765
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.72 E-value=3.5e-17 Score=176.35 Aligned_cols=131 Identities=24% Similarity=0.183 Sum_probs=113.9
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHc---CCHHHHHHHhccCCCccccccCccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~---g~~e~VelLL~~~p~~~~dGa~~~~ 769 (964)
.++|+.|+..+..+.|+.||+...+.+... .....+..|.||||+||.. ++.++|++||++ |+
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~---~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-------ga---- 217 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPL---PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-------GG---- 217 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCE---ECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-------SS----
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccC---CCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-------CC----
Confidence 457999999999999999998654422100 0001245688999999997 899999999999 87
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 849 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~L 849 (964)
++|.+|..|.||||+|+. .|+.++|++|+++ ||+++++|..|.||||+|+..|+.+++++
T Consensus 218 -------------dvn~~d~~G~TpLh~A~~-~g~~~~v~~Ll~~------gad~~~~d~~G~TpL~~A~~~~~~~iv~~ 277 (301)
T 2b0o_E 218 -------------HLDAKAADGNTALHYAAL-YNQPDCLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEEL 277 (301)
T ss_dssp -------------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCCSCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred -------------CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 899999999999999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhcC
Q 002122 850 VQKKINKR 857 (964)
Q Consensus 850 L~~k~ak~ 857 (964)
|.+++++.
T Consensus 278 Ll~~ga~~ 285 (301)
T 2b0o_E 278 LEQAQAGT 285 (301)
T ss_dssp HHHHHHHT
T ss_pred HHHhcCCC
Confidence 99999874
No 94
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.70 E-value=1.2e-17 Score=180.44 Aligned_cols=185 Identities=13% Similarity=0.079 Sum_probs=131.4
Q ss_pred HHHHhhhcCcchh-hhhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCc---hH
Q 002122 632 LESALEFNRTDAD-VERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEW---CA 706 (964)
Q Consensus 632 LE~~le~~a~~~~-~~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~---~a 706 (964)
++.+++.++.... .+..|.+++|.+| .+.+..+.+||+++......+ ....+|||+|+..|+ .+
T Consensus 113 ~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d-----------~~g~TpLh~A~~~g~~~~~~ 181 (327)
T 1sw6_A 113 NDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD-----------NMGESCLVKAVKSVNNYDSG 181 (327)
T ss_dssp HHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCC-----------TTCCCHHHHHHHSSHHHHTT
T ss_pred HHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC-----------CCCCCHHHHHHHhcccccHH
Confidence 4445555665544 4678999999999 588888999999885433322 235789999999998 78
Q ss_pred HHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHH----cCCHHHHHHHhccCCCccc-------------cccC---
Q 002122 707 VVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVR----KNSRPLVDLLLRFVPLEVS-------------DRLG--- 766 (964)
Q Consensus 707 VVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr----~g~~e~VelLL~~~p~~~~-------------dGa~--- 766 (964)
+++.||+.+.. .+ ...+..|.||||+|++ .|+.++|++||+....... .|+.
T Consensus 182 ~~~~ll~~~~~-~~-------~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 253 (327)
T 1sw6_A 182 TFEALLDYLYP-CL-------ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND 253 (327)
T ss_dssp CHHHHHHHHGG-GG-------GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------
T ss_pred HHHHHHHhhhc-cc-------cCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccc
Confidence 88888887632 11 1235669999999999 8999999999976100000 0010
Q ss_pred ---ccccccccccccccc--cCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHc
Q 002122 767 ---SENKALVDGVHKGFL--FRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLR 841 (964)
Q Consensus 767 ---~~~~~lv~~a~~~y~--fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~r 841 (964)
...++++......++ .++|.+|..|+||||+||. .|+.++|++|+++ ||+++++|..|.||||+|+.+
T Consensus 254 ~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~-~g~~~~v~~Ll~~------Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 254 KNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAAR-LGNISIVDALLDY------GADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp ------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHH-HCCHHHHHHHHHT------TCCTTCCCTTSCCGGGGTCC-
T ss_pred ccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCcccCCCCCCHHHHHHhc
Confidence 011222221110000 1589999999999999999 9999999999999 999999999999999999876
Q ss_pred C
Q 002122 842 G 842 (964)
Q Consensus 842 G 842 (964)
|
T Consensus 327 g 327 (327)
T 1sw6_A 327 E 327 (327)
T ss_dssp -
T ss_pred C
Confidence 5
No 95
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.69 E-value=8.5e-17 Score=179.33 Aligned_cols=126 Identities=20% Similarity=0.090 Sum_probs=112.0
Q ss_pred chHHHHHHHc-CchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 002122 693 KWLIEFSMDH-EWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 771 (964)
Q Consensus 693 k~lL~fAve~-g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~ 771 (964)
.++||.|+.. ++.++|+.||+.+++.+.. . .+..|.||||+||..|+.++|++||++ |+
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~----~---~~~~g~TpLh~Aa~~g~~~iv~~LL~~-------Ga------ 259 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWV----N---GGQDNATPLIQATAANSLLACEFLLQN-------GA------ 259 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCC----C---TTTTCCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCcc----c---cccCCCCHHHHHHHCCCHHHHHHHHHc-------CC------
Confidence 4599999999 9999999999966543211 1 125688999999999999999999999 87
Q ss_pred cccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 772 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 772 lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
++|..|..|+||||+|+. .|+.++|++|+++ ||+++++|.+|.||||+|+..||.+++++|.
T Consensus 260 -----------dvn~~d~~G~TpLh~A~~-~g~~~~v~~LL~~------Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 260 -----------NVNQADSAGRGPLHHATI-LGHTGLACLFLKR------GADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCCCCCCCCHHHHHHH-cCcHHHHHHHHHC------cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 899999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred Hhhhc
Q 002122 852 KKINK 856 (964)
Q Consensus 852 ~k~ak 856 (964)
..+.+
T Consensus 322 ~~~~~ 326 (368)
T 3jue_A 322 LAKMR 326 (368)
T ss_dssp HHHC-
T ss_pred HcCCC
Confidence 87643
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.67 E-value=2.1e-16 Score=147.90 Aligned_cols=97 Identities=29% Similarity=0.336 Sum_probs=91.2
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHH
Q 002122 730 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 809 (964)
Q Consensus 730 ~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~ 809 (964)
.+..|.||||+|+..|+.++|++||+. |+ ++|..|..|.||||+|+. .|+.++++
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~~~ 60 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQN-------GS-----------------DPNVKDHAGWTPLHEACN-HGHLKVVE 60 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CSCCCCTTSCCHHHHHHH-TTCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCcCCCCCCCHHHHHHH-cCCHHHHH
Confidence 356689999999999999999999999 77 789999999999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 810 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 810 lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
+|+++ +++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 61 ~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 102 (137)
T 3c5r_A 61 LLLQH------KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASR 102 (137)
T ss_dssp HHHHT------TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHc------CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999 9999999999999999999999999999999987764
No 97
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.67 E-value=1.2e-16 Score=145.36 Aligned_cols=97 Identities=28% Similarity=0.335 Sum_probs=91.3
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHH
Q 002122 730 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 809 (964)
Q Consensus 730 ~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~ 809 (964)
.+..|.||||+||+.|+.+++++||+. |+ ++|..|..|.||||+|+. .|+.++++
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~-----------------~~~~~d~~g~t~L~~A~~-~~~~~~~~ 59 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSK-------GA-----------------DVNARSKDGNTPLHLAAK-NGHAEIVK 59 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTT-------TC-----------------CSSCCCSSSCCTTHHHHT-TTCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCcHHHHH
Confidence 456789999999999999999999999 76 789999999999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 810 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 810 lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
+|+++ |++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 60 ~Ll~~------g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 101 (115)
T 2l6b_A 60 LLLAK------GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101 (115)
T ss_dssp HHTTT------TCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH
T ss_pred HHHHc------CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 99999 9999999999999999999999999999999988764
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.66 E-value=3.3e-16 Score=144.29 Aligned_cols=94 Identities=23% Similarity=0.140 Sum_probs=88.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhh
Q 002122 733 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 812 (964)
Q Consensus 733 ~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL 812 (964)
.+.|+||+|++.|+.++|++||+. |+ ++|..|..|.||||+|+. .|+.+++++|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~-------~~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll 60 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAK-------GE-----------------DVNRTLEGGRKPLHYAAD-CGQLEILEFLL 60 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTSCCTTSSCHHHHHHH-TTCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHc-------CC-----------------CcCccCCCCCcHHHHHHH-cCCHHHHHHHH
Confidence 467999999999999999999998 66 789999999999999999 99999999999
Q ss_pred cCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 813 DDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 813 ~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
++ |++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 61 ~~------g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 99 (123)
T 3aaa_C 61 LK------GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADK 99 (123)
T ss_dssp TT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred Hc------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99 9999999999999999999999999999999987654
No 99
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.66 E-value=1.2e-16 Score=153.34 Aligned_cols=141 Identities=17% Similarity=0.073 Sum_probs=102.1
Q ss_pred hhcCccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCC
Q 002122 646 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 724 (964)
Q Consensus 646 ~e~g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~ 724 (964)
.+.+.+++|.+| .+.+..+.||++++......+ ...+++||+|+ .|+.++|++||+.+++.+.
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~---- 72 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPN-----------SYGRRPIQVMM-MGSARVAELLLLHGAEPNC---- 72 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCC-----------SSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC----
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----------CCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC----
Confidence 356788999998 588899999998774322222 23578999985 8999999999996543211
Q ss_pred CCchhhccCCCc-HHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCC
Q 002122 725 HPSLDLALTELG-LLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDG 803 (964)
Q Consensus 725 ~~~le~~l~G~T-pLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G 803 (964)
.+..|.| |||+|++.|+.++|++||++ |+ ++|.+|..|.||||+|+. .|
T Consensus 73 -----~d~~g~ttpL~~A~~~~~~~~v~~Ll~~-------ga-----------------~~~~~d~~g~tpl~~A~~-~~ 122 (156)
T 1bi7_B 73 -----ADPATLTRPVHDAAREGFLDTLVVLHRA-------GA-----------------RLDVRDAWGRLPVDLAEE-LG 122 (156)
T ss_dssp -----CCTTTCCCHHHHHHHHTCHHHHHHHHHH-------TC-----------------CSSCCCTTCCCHHHHHHH-HT
T ss_pred -----cCCCCCcHHHHHHHHCCCHHHHHHHHHc-------CC-----------------CCcccCCCCCCHHHHHHH-hC
Confidence 2455788 99999999999999999999 77 899999999999999999 99
Q ss_pred CHHHHHHhhcCCCCCccccccccCCCCCCCHHHHH
Q 002122 804 SEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYA 838 (964)
Q Consensus 804 ~~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A 838 (964)
+.+++++|+++ ||+++.+|..|.||.+-+
T Consensus 123 ~~~~v~~Ll~~------ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 123 HRDVARYLRAA------AGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CHHHHHHHSSC------C-----------------
T ss_pred HHHHHHHHHHc------CCCCCccCcCcCcccccC
Confidence 99999999999 999999999999998743
No 100
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.63 E-value=6.6e-16 Score=140.94 Aligned_cols=90 Identities=24% Similarity=0.229 Sum_probs=84.5
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
+..|.|+||+||..|+.++|++||+. |+ ++|.+|..|.||||+|+. .|+.+++++
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~-----------------~i~~~d~~g~tpLh~A~~-~~~~~~v~~ 75 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMAN-------GA-----------------DVAAKDKNGSTPLHLAAR-NGHLEVVKL 75 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTCCCHHHHHHH-TTCHHHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCccCCCCCCHHHHHHH-cCCHHHHHH
Confidence 45678999999999999999999998 76 789999999999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 851 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~ 851 (964)
|+++ |++++.+|..|.||||+|+..|+.+++++|+
T Consensus 76 Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L~ 110 (110)
T 2zgd_A 76 LLEA------GADVXAQDKFGKTAFDISIDNGNEDLAEILQ 110 (110)
T ss_dssp HHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHC
T ss_pred HHHc------CCCccccccCCCcHHHHHHHcCCHHHHHHhC
Confidence 9999 9999999999999999999999999999873
No 101
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.62 E-value=8.2e-16 Score=144.32 Aligned_cols=95 Identities=24% Similarity=0.248 Sum_probs=89.0
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHh
Q 002122 732 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 811 (964)
Q Consensus 732 l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lL 811 (964)
..+.||||+||+.|+.++|++||+. |+ ++|..|..|.||||+|+. .|+.+++++|
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~L 66 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMAN-------GA-----------------DVNAKDEYGLTPLYLATA-HGHLEIVEVL 66 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHHHHHHH
Confidence 3467999999999999999999999 76 789999999999999999 9999999999
Q ss_pred hcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 812 TDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 812 L~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
+++ |++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 67 l~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 106 (136)
T 2jab_A 67 LKN------GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADV 106 (136)
T ss_dssp HHT------TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHc------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999 9999999999999999999999999999999987654
No 102
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.62 E-value=1.7e-16 Score=159.66 Aligned_cols=134 Identities=9% Similarity=-0.072 Sum_probs=109.0
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCH----HHHHHHhccCCCccccccCccc
Q 002122 694 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSR----PLVDLLLRFVPLEVSDRLGSEN 769 (964)
Q Consensus 694 ~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~----e~VelLL~~~p~~~~dGa~~~~ 769 (964)
+.|+.|+..|+.+.++.++....+ ...+..|.||||+|+..++. ++|++||+. |+
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~----------~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-------Ga---- 66 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYE----------DKESVLKSNILYDVLRNNNDEARYKISMFLINK-------GA---- 66 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSS----------CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-------TC----
T ss_pred cHHHHHHHcCCHHHHHHHHhcCcc----------cccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-------CC----
Confidence 478999999999999999874211 11124589999999999975 599999999 88
Q ss_pred cccccccccccccCCCcCCCCCChHHHHHHhhCCC------HHHHHHhhcCCCCCccccccccCCCCCC-CHHHHHHHcC
Q 002122 770 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS------EDVLDALTDDPGMVGIEAWKNARDSSGS-TPEDYARLRG 842 (964)
Q Consensus 770 ~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~------~dVV~lLL~~p~~vg~gAdinarD~~G~-TPLh~A~~rG 842 (964)
++|.+|..|+||||+|+. .|+ .++|++|+++ ||++|++|..|. ||||+|+..+
T Consensus 67 -------------dvn~~d~~g~TpLh~a~~-~~~~~~~~~~~iv~~Ll~~------Gadin~~d~~g~ttpLh~A~~~~ 126 (186)
T 3t8k_A 67 -------------DIKSRTKEGTTLFFPLFQ-GGGNDITGTTELCKIFLEK------GADITALYKPYKIVVFKNIFNYF 126 (186)
T ss_dssp -------------CSSCCCTTCCCTHHHHHH-HCTTCHHHHHHHHHHHHHT------TCCSSSCBGGGTBCTTGGGGGCC
T ss_pred -------------CCCCCCCCCCcHHHHHHH-cCCcchhhHHHHHHHHHHC------CCCCCccCCCcCchHHHHHHHcC
Confidence 999999999999999999 676 5789999999 999999999999 9999999954
Q ss_pred -----CHHHHHHHHH-hhhcCCC---CCCceeecC
Q 002122 843 -----HYSYIHLVQK-KINKRPN---GGHVVVDIC 868 (964)
Q Consensus 843 -----h~svv~LL~~-k~ak~~~---~~~v~v~ip 868 (964)
+.+++++|.+ ++++... .+.+.++++
T Consensus 127 ~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 127 VDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp SCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred CChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence 4568999988 7776432 334444443
No 103
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.62 E-value=5.7e-16 Score=145.37 Aligned_cols=95 Identities=20% Similarity=0.186 Sum_probs=89.2
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
+..|.||||+|++.|+.++|++||+. |+ ++|.++..|.||||+|+. |+.+++++
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~--~~~~~v~~ 62 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLEA-------GA-----------------DPNALNRFGRRPIQVMMM--GSAQVAEL 62 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTCCTTTTTSTT--SCHHHHHH
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHHc-------CC-----------------CcCCcCCCCCCHHHHHHc--CCHHHHHH
Confidence 45688999999999999999999999 77 889999999999999998 99999999
Q ss_pred hhcCCCCCccccccccCCCC-CCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 811 LTDDPGMVGIEAWKNARDSS-GSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~-G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
|+++ |++++.+|.. |.||||+|+..|+.+++++|.+++++.
T Consensus 63 Ll~~------g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 104 (136)
T 1d9s_A 63 LLLH------GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104 (136)
T ss_dssp HHHH------TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC
T ss_pred HHHC------CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999 9999999999 999999999999999999999987654
No 104
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.60 E-value=1.5e-15 Score=156.67 Aligned_cols=107 Identities=21% Similarity=0.176 Sum_probs=95.2
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
...+.||||+|++.|+.++|++||+. |+ ++|..|..|.||||+|+. .|+.++|++
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~d~~g~tpLh~A~~-~g~~~~v~~ 72 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKE-------MN-----------------DPSQPNEEGITALHNAIC-GANYSIVDF 72 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHH-------SS-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHH
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhc-------CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHHHHH
Confidence 44577999999999999999999999 77 889999999999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCCC----CCCceeecC
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPN----GGHVVVDIC 868 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~~----~~~v~v~ip 868 (964)
|+++ |+++|.+|..|.||||+|+..|+.+++++|.+++++... .+.+.+.++
T Consensus 73 Ll~~------ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 73 LITA------GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp HHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred HHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 9999 999999999999999999999999999999998876431 344555554
No 105
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.60 E-value=2.8e-15 Score=135.83 Aligned_cols=94 Identities=30% Similarity=0.369 Sum_probs=88.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhh
Q 002122 733 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 812 (964)
Q Consensus 733 ~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL 812 (964)
+|.||||+|++.|+.++|++|++. |+ +++..+..|.||||+|+. .|+.+++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-------~~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~~~~Ll 55 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA-------GA-----------------DVNAKDKNGRTPLHLAAR-NGHLEVVKLLL 55 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH-------TC-----------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc-------CC-----------------CCCCcCCCCCcHHHHHHH-cCcHHHHHHHH
Confidence 378999999999999999999998 66 788899999999999999 99999999999
Q ss_pred cCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 813 DDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 813 ~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
++ +++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 56 ~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~ 94 (126)
T 1n0r_A 56 EA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 94 (126)
T ss_dssp HT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred Hc------CCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC
Confidence 99 9999999999999999999999999999999987653
No 106
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.58 E-value=4.3e-15 Score=150.00 Aligned_cols=97 Identities=22% Similarity=0.246 Sum_probs=90.2
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHH
Q 002122 731 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 731 ~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~l 810 (964)
+..|.||||+||+.|+.++|++||+. |+ ++|..|..|.||||+||. .|+.++|++
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~ 124 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDN-------RV-----------------GVNGLDKAGSTALYWACH-GGHKDIVEM 124 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhC-------CC-----------------CccccCCCCCCHHHHHHH-cCCHHHHHH
Confidence 34578999999999999999999998 77 789999999999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
|++++ +++++.+|..|.||||+|+.+|+.+++++|.+++++.
T Consensus 125 Ll~~~-----g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 166 (222)
T 3ehr_A 125 LFTQP-----NIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGART 166 (222)
T ss_dssp HTTST-----TCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred HHcCC-----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99874 8999999999999999999999999999999998764
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.58 E-value=2.6e-15 Score=136.38 Aligned_cols=105 Identities=24% Similarity=0.187 Sum_probs=91.5
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..++.++++.||+..++.+ ..+..|.||||+|+..++.++|++||++ |+
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~----- 66 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVN---------ARSKDGNTPLHLAAKNGHAEIVKLLLAK-------GA----- 66 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCSS---------CCCSSSCCTTHHHHTTTCHHHHHHHTTT-------TC-----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCcHHHHHHHHHc-------CC-----
Confidence 45789999999999999999998654321 1245688999999999999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHH
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPE 835 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdinarD~~G~TPL 835 (964)
+++.+|..|.||||+|+. .|+.+++++|+++ ||++|.++..|.||-
T Consensus 67 ------------~~~~~d~~g~tpl~~A~~-~~~~~~~~~Ll~~------ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 67 ------------DVNARSKDGNTPEHLAKK-NGHHEIVKLLDAK------GADVNARSWGSSHHH 112 (115)
T ss_dssp ------------CTTCCCTTCCCTTHHHHT-TTCHHHHHHHHTT------SSSHHHHSCCCC---
T ss_pred ------------CCcccCCCCCCHHHHHHH-CCCHHHHHHHHHc------CCCCCcCCccccccc
Confidence 789999999999999999 9999999999999 999999999999985
No 108
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.56 E-value=3e-15 Score=161.26 Aligned_cols=143 Identities=14% Similarity=-0.020 Sum_probs=104.1
Q ss_pred cccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHc---CchHHHHHHhhhhccCcccCCCCC
Q 002122 651 IDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDH---EWCAVVKKLLHILLDGTVSLGEHP 726 (964)
Q Consensus 651 ~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~---g~~aVVk~LL~~l~d~~vd~g~~~ 726 (964)
..++.++ .+.+..+-+++..+......- ..........++||+|+.. ++.++|++||+.+++.+.
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~-----~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~------ 221 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPL-----PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA------ 221 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCE-----ECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC------
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccC-----CCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC------
Confidence 3466666 366666777776653211100 0000123457899999987 899999999997553221
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHH
Q 002122 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 806 (964)
Q Consensus 727 ~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~d 806 (964)
.+..|.||||+|+..|+.++|++||++ |+ ++|.+|..|.||||+|+. .|+.+
T Consensus 222 ---~d~~G~TpLh~A~~~g~~~~v~~Ll~~-------ga-----------------d~~~~d~~G~TpL~~A~~-~~~~~ 273 (301)
T 2b0o_E 222 ---KAADGNTALHYAALYNQPDCLKLLLKG-------RA-----------------LVGTVNEAGETALDIARK-KHHKE 273 (301)
T ss_dssp ---CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CCSCCCTTSCCHHHHHHH-HTCHH
T ss_pred ---CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHH
Confidence 245689999999999999999999999 88 899999999999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCH
Q 002122 807 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHY 844 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~ 844 (964)
++++|+++ +++ .|.||||+|+..||.
T Consensus 274 iv~~Ll~~------ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 274 CEELLEQA------QAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHH------HHH------TTSSCCC--------
T ss_pred HHHHHHHh------cCC------CCCChhHHHHhcCCc
Confidence 99999998 776 589999999999874
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.55 E-value=2.6e-16 Score=175.72 Aligned_cols=156 Identities=12% Similarity=0.057 Sum_probs=120.4
Q ss_pred CccccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCc
Q 002122 649 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 727 (964)
Q Consensus 649 g~~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~ 727 (964)
+.+++|.+| .+.+..+.+|+.++......+ .......+|||+|+.+|+.++|++|++.+++... ..
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~--------~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~-----~~ 158 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVK--------VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM-----AM 158 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC----------CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH-----HH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHH--------HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-----cc
Confidence 468999999 689999999998874111000 1112346799999999999999999996532100 00
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCc--CCCCCChHHHHHH-hhCCC
Q 002122 728 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDV--IGPAGLTPIHIAA-GKDGS 804 (964)
Q Consensus 728 le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~--~d~~G~TPLHiAA-~~~G~ 804 (964)
. .... .||||+|+++|+.++|++||++ |+ +++. .|..|.||||+|| . .|+
T Consensus 159 i-~~~~-~TpLh~Aa~~G~~eiv~~Ll~~-------ga-----------------~~~~~~~d~~g~TpL~~Aa~~-~G~ 211 (376)
T 2aja_A 159 I-QAEN-YHAFRLAAENGHLHVLNRLCEL-------AP-----------------TEATAMIQAENYYAFRWAAVG-RGH 211 (376)
T ss_dssp H-SHHH-HHHHHHHHHTTCHHHHHHHHHS-------CG-----------------GGHHHHHHHHHHHHHHHHHST-TCC
T ss_pred c-CCCC-CCHHHHHHHCCCHHHHHHHHHc-------CC-----------------ccchhccCCCCCCHHHHHHHH-CCC
Confidence 1 0112 6999999999999999999999 76 5555 7778999999999 8 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 805 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 805 ~dVV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
.+||++|+++ |++ |.||||+|+.+||.+++++|.+++++.
T Consensus 212 ~eiv~~Ll~~------ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 212 HNVINFLLDC------PVM-------LAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp HHHHHHHTTS------HHH-------HHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHhC------CCc-------cchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 9999999998 653 889999999999999999999988754
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.55 E-value=1.8e-14 Score=126.90 Aligned_cols=88 Identities=26% Similarity=0.280 Sum_probs=78.8
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
+++||+|+..|+.+++++|++..++.+ ..+..|.||||+|+..|+.++|++|+++ |+
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~n---------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga------- 59 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGADVN---------AKDKNGRTPLHLAARNGHLEVVKLLLEA-------GA------- 59 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCc---------ccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 679999999999999999999654321 1345689999999999999999999999 77
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcC
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 814 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~ 814 (964)
++|.+|..|.||||+|+. .|+.+++++|+++
T Consensus 60 ----------~~~~~d~~g~t~l~~A~~-~~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 60 ----------DVNAKDKNGRTPLHLAAR-NGHLEVVKLLLEA 90 (93)
T ss_dssp ----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT
T ss_pred ----------CCCccCCCCCCHHHHHHH-cCCHHHHHHHHHc
Confidence 889999999999999999 9999999999998
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.53 E-value=8.2e-16 Score=171.78 Aligned_cols=129 Identities=12% Similarity=0.085 Sum_probs=102.2
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 002122 693 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 772 (964)
Q Consensus 693 k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~l 772 (964)
+++||+|+..|+.++|+.||+.+..... ... .+..+.||||+|++.|+.++|++|+++ |++..
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~----~~~--~~~~~~tpL~~Aa~~G~~eiv~~Ll~~-------gad~~---- 155 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEI----VKV--IQAENYQAFRLAAENGHLHVLNRLCEL-------APTEI---- 155 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSS----CC----CHHHHHHHHHHHHTTCHHHHHHHHHS-------CTTTH----
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHH----HHH--hccCCCCHHHHHHHcCCHHHHHHHHhC-------CCCcc----
Confidence 5899999999999999999986431100 001 122366899999999999999999999 54100
Q ss_pred ccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCcccccccc--CCCCCCCHHHHHH-HcCCHHHHHH
Q 002122 773 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNA--RDSSGSTPEDYAR-LRGHYSYIHL 849 (964)
Q Consensus 773 v~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lLL~~p~~vg~gAdina--rD~~G~TPLh~A~-~rGh~svv~L 849 (964)
.++..+.+ .||||+||. .|+.+||++|+++ |++++. +|..|.||||+|+ .+||.+++++
T Consensus 156 ----------~~~i~~~~-~TpLh~Aa~-~G~~eiv~~Ll~~------ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~ 217 (376)
T 2aja_A 156 ----------MAMIQAEN-YHAFRLAAE-NGHLHVLNRLCEL------APTEATAMIQAENYYAFRWAAVGRGHHNVINF 217 (376)
T ss_dssp ----------HHHHSHHH-HHHHHHHHH-TTCHHHHHHHHHS------CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred ----------ccccCCCC-CCHHHHHHH-CCCHHHHHHHHHc------CCccchhccCCCCCCHHHHHHHHCCCHHHHHH
Confidence 01223333 999999999 9999999999999 999988 8999999999999 9999999999
Q ss_pred HHHhhhc
Q 002122 850 VQKKINK 856 (964)
Q Consensus 850 L~~k~ak 856 (964)
|.++++.
T Consensus 218 Ll~~ga~ 224 (376)
T 2aja_A 218 LLDCPVM 224 (376)
T ss_dssp HTTSHHH
T ss_pred HHhCCCc
Confidence 9987653
No 112
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.53 E-value=1.8e-14 Score=141.97 Aligned_cols=94 Identities=20% Similarity=0.115 Sum_probs=87.1
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHh
Q 002122 732 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 811 (964)
Q Consensus 732 l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lL 811 (964)
..|.||||.|++.|+.++|++||+. + ++|..|..|.||||+|+. .|+.+++++|
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~~--------~-----------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~L 95 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLED--------R-----------------DVDAVDENGRTALLFVAG-LGSDKCVRLL 95 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTTT--------S-----------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhc--------C-----------------CCCCcCCCCCCHHHHHHH-cCCHHHHHHH
Confidence 3578999999999999999999973 1 788899999999999999 9999999999
Q ss_pred hcCCCCCccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 812 TDDPGMVGIEAWKNARD-SSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 812 L~~p~~vg~gAdinarD-~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
+++ |+++|.+| .+|.||||+|+..|+.+++++|.+++++.
T Consensus 96 l~~------ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 136 (183)
T 3deo_A 96 AEA------GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 136 (183)
T ss_dssp HHT------TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred HHc------CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC
Confidence 999 99999999 89999999999999999999999988764
No 113
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.49 E-value=3.3e-14 Score=147.31 Aligned_cols=94 Identities=20% Similarity=0.115 Sum_probs=87.1
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHh
Q 002122 732 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 811 (964)
Q Consensus 732 l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lL 811 (964)
..|.||||+|++.|+.++|++||+. + ++|..|..|.||||+|+. .|+.++|++|
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~~--------~-----------------~~~~~d~~g~t~L~~A~~-~g~~~~v~~L 96 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLED--------R-----------------DVDAVDENGRTALLFVAG-LGSDKCVRLL 96 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTTT--------C-----------------CTTCBCTTSCBHHHHHHH-HTCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHcC--------C-----------------CCCCcCCCCCCHHHHHHH-CCCHHHHHHH
Confidence 3478999999999999999999973 1 788999999999999999 9999999999
Q ss_pred hcCCCCCccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 002122 812 TDDPGMVGIEAWKNARD-SSGSTPEDYARLRGHYSYIHLVQKKINKR 857 (964)
Q Consensus 812 L~~p~~vg~gAdinarD-~~G~TPLh~A~~rGh~svv~LL~~k~ak~ 857 (964)
+++ |+++|.+| ..|.||||+|+.+||.+++++|.+++++.
T Consensus 97 l~~------ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 137 (244)
T 3ui2_A 97 AEA------GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 137 (244)
T ss_dssp HHT------TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHc------CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 999 99999999 88999999999999999999999988764
No 114
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.44 E-value=2.4e-13 Score=155.64 Aligned_cols=139 Identities=15% Similarity=0.010 Sum_probs=102.0
Q ss_pred cccHHHH-HHHHHHHhhhhcccccccccCCCCCCCCCcCccccchHHHHHHH---cCchHHHHHHhhhhccCcccCCCCC
Q 002122 651 IDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMD---HEWCAVVKKLLHILLDGTVSLGEHP 726 (964)
Q Consensus 651 ~~~h~~a-l~fL~EIGWLLqr~~~~~~~~~~d~~l~l~ql~R~k~lL~fAve---~g~~aVVk~LL~~l~d~~vd~g~~~ 726 (964)
..++.++ .+.+..+..||.++........ .........++||+||. .|+.++|++||+.+++.+.
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~-----~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~------ 202 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLP-----GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA------ 202 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBC-----CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTC------
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCC-----CcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCc------
Confidence 4577777 5888888889888753221100 00112346889999976 8999999999997654221
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhCCCHH
Q 002122 727 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 806 (964)
Q Consensus 727 ~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~d 806 (964)
.+..|.||||+||..|+.++|++||++ |+ ++|.+|..|.||||+|+. .|+.+
T Consensus 203 ---~d~~g~TpLh~A~~~g~~~~v~~Ll~~-------ga-----------------~~~~~d~~g~tpl~~A~~-~~~~~ 254 (497)
T 3lvq_E 203 ---KAADGNTALHYAALYNQPDCLKLLLKG-------RA-----------------LVGTVNEAGETALDIARK-KHHKE 254 (497)
T ss_dssp ---CCSSSCCHHHHHTTTTCHHHHHHHHHT-------CC-----------------CCSCCCTTCCCHHHHHHH-TTCHH
T ss_pred ---cCCCCCcHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHH
Confidence 245699999999999999999999999 88 899999999999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHH
Q 002122 807 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARL 840 (964)
Q Consensus 807 VV~lLL~~p~~vg~gAdinarD~~G~TPLh~A~~ 840 (964)
++++|+++ ||++++ ||+|++..
T Consensus 255 ~~~~Ll~~------ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 255 CEELLEQA------QAGTFA------FPLHVDYS 276 (497)
T ss_dssp HHHHHHHT------CC------------------
T ss_pred HHHHHHHh------CCCCCC------Ccceeecc
Confidence 99999999 999887 56666543
No 115
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.35 E-value=1.4e-12 Score=145.37 Aligned_cols=94 Identities=24% Similarity=0.186 Sum_probs=87.9
Q ss_pred CCcHHHHHHHc-CCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCC--CCCChHHHHHHhhCCCHHHHHH
Q 002122 734 ELGLLHRAVRK-NSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIG--PAGLTPIHIAAGKDGSEDVLDA 810 (964)
Q Consensus 734 G~TpLH~AVr~-g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d--~~G~TPLHiAA~~~G~~dVV~l 810 (964)
+.|+||.|++. ++.++|++||+. |+ ++|..+ ..|.||||+||. .|+.++|++
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~-------Ga-----------------dvn~~~~~~~g~TpLh~Aa~-~g~~~iv~~ 253 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAH-------GA-----------------DVNWVNGGQDNATPLIQATA-ANSLLACEF 253 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHT-------TC-----------------CTTCCCTTTTCCCHHHHHHH-TTCHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHc-------CC-----------------CCCccccccCCCCHHHHHHH-CCCHHHHHH
Confidence 44899999999 999999999999 77 788887 899999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
|+++ ||++|.+|..|.||||+|+..||.+++++|.+++++..
T Consensus 254 LL~~------Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~ 295 (368)
T 3jue_A 254 LLQN------GANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLG 295 (368)
T ss_dssp HHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHc------CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCC
Confidence 9999 99999999999999999999999999999999987643
No 116
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.32 E-value=3.7e-12 Score=135.57 Aligned_cols=100 Identities=16% Similarity=0.075 Sum_probs=86.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCCcCCCCCChHHHHHHhhC---CCHHHHHH
Q 002122 734 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKD---GSEDVLDA 810 (964)
Q Consensus 734 G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~---G~~dVV~l 810 (964)
..++||.|++.|+.+.+..|+.. |++. ...+.++..+..|.||||+||. . |+.++|++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~-------g~~~-----------~~~~~l~~~~~~g~t~Lh~A~~-~~~~~~~~~v~~ 190 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYAD-------GVDL-----------TEKIPLANGHEPDETALHLAVR-SVDRTSLHIVDF 190 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHT-------TCCT-----------TSBCCCSSCSSTTCBHHHHHHH-HCCTTTHHHHHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHh-------hcch-----------hhhccccccccCCCCcchHHHH-hcccchHHHHHH
Confidence 34799999999999999999988 5411 1112255668899999999999 6 89999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 002122 811 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 858 (964)
Q Consensus 811 LL~~p~~vg~gAdinarD~~G~TPLh~A~~rGh~svv~LL~~k~ak~~ 858 (964)
|+++ ||++|.+|..|.||||+|+..||.+++++|.+++++..
T Consensus 191 Ll~~------ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~ 232 (278)
T 1dcq_A 191 LVQN------SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIE 232 (278)
T ss_dssp HHHH------CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHC------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999 99999999999999999999999999999999887643
No 117
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.32 E-value=4e-12 Score=115.82 Aligned_cols=87 Identities=21% Similarity=0.129 Sum_probs=76.4
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccCcccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 002122 691 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 770 (964)
Q Consensus 691 R~k~lL~fAve~g~~aVVk~LL~~l~d~~vd~g~~~~le~~l~G~TpLH~AVr~g~~e~VelLL~~~p~~~~dGa~~~~~ 770 (964)
...++||+|+..|+.++++.||+..++.+ . .+..|.||||+||..|+.++|++||++ |+
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~----~-----~d~~g~tpLh~A~~~~~~~~v~~Ll~~-------ga----- 81 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANGADVA----A-----KDKNGSTPLHLAARNGHLEVVKLLLEA-------GA----- 81 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTT----C-----CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-----
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCCC----c-----cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 35789999999999999999998644321 1 245689999999999999999999999 77
Q ss_pred ccccccccccccCCCcCCCCCChHHHHHHhhCCCHHHHHHh
Q 002122 771 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 811 (964)
Q Consensus 771 ~lv~~a~~~y~fdpn~~d~~G~TPLHiAA~~~G~~dVV~lL 811 (964)
++|.+|..|.||||+|+. .|+.+++++|
T Consensus 82 ------------~~~~~d~~g~tpl~~A~~-~~~~~~~~~L 109 (110)
T 2zgd_A 82 ------------DVXAQDKFGKTAFDISID-NGNEDLAEIL 109 (110)
T ss_dssp ------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHH
T ss_pred ------------CccccccCCCcHHHHHHH-cCCHHHHHHh
Confidence 889999999999999999 9999999987
No 118
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=55.11 E-value=29 Score=31.54 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=32.3
Q ss_pred CceeEEeceeeEecCCceEEEEEeeccCCCCceE-EEEecC
Q 002122 523 YSKILSVKPIAVPASERAQFFVKGINLGRSATRL-LCAVEG 562 (964)
Q Consensus 523 ~p~i~~V~P~a~~ag~~~~~~v~G~NL~~p~~rl-lc~~~G 562 (964)
.|+|..++|..-+-| +.++++|.||......+ -+...|
T Consensus 7 ~P~It~i~P~~Gp~G--T~vTI~G~nlg~~~sdv~~V~vgg 45 (99)
T 1uad_C 7 PPLVTGISPNEGIPW--TKVTIRGENLGTGPTDLIGLTICG 45 (99)
T ss_dssp CCEEEEEESSEESTT--CEEEEEEECSCSSGGGEEEEEETT
T ss_pred CCEEEEEECCCcCCC--CEEEEEEEeCCCCcccceEEEECC
Confidence 589999999988664 99999999999876665 488888
No 119
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=29.55 E-value=85 Score=35.06 Aligned_cols=70 Identities=14% Similarity=0.211 Sum_probs=48.8
Q ss_pred CCCCc-eeEEeceeeEecCCceEEEEEeeccCCCCceEEEEecCcceeeehhccccccccCccccccceEeeeeccCCcc
Q 002122 520 SNNYS-KILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAV 598 (964)
Q Consensus 520 s~~~p-~i~~V~P~a~~ag~~~~~~v~G~NL~~p~~rllc~~~GkYl~~e~~~~~~~~~~~~~~~~ei~~~~~~~~~P~~ 598 (964)
.|+.| +|..+.|..- +..+++++.|.|+......+-+.|.|+-...- ... .+.|. |.+|..
T Consensus 15 ~~~~p~~i~~~~P~~g--~~~~~~~i~G~nfg~~~~~~~v~~~~~~a~v~----~~~-------~~~i~-----~~vp~~ 76 (433)
T 4hw6_A 15 NPKEEIVVEKFLPTEG--RKGTRVVVYGRNFGNDVSKVKVTIGGYPAKVI----NVK-------GESLL-----CICPSK 76 (433)
T ss_dssp CTTSCCEEEEEESSEE--CTTCEEEEEEECCCSCGGGEEEEETTEEEEEE----EEC-------SSEEE-----EECCTT
T ss_pred CCCCCCEEEEECCCCC--CCCCEEEEEeECCCCCcceeEEEECCEEEEEE----EeC-------CCEEE-----EEeCCC
Confidence 34556 9999999984 66788999999999888899999999544321 111 23444 457877
Q ss_pred CCCceeeee
Q 002122 599 TGRGFIEIE 607 (964)
Q Consensus 599 ~G~~fIEVE 607 (964)
.|.+-|+|.
T Consensus 77 ~~~g~~~v~ 85 (433)
T 4hw6_A 77 AYEGDVKVS 85 (433)
T ss_dssp CTTCCEEEE
T ss_pred CCCCCEEEE
Confidence 765555553
No 120
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=28.89 E-value=50 Score=30.02 Aligned_cols=45 Identities=7% Similarity=0.049 Sum_probs=37.2
Q ss_pred CceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEecCcceeee
Q 002122 523 YSKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQE 568 (964)
Q Consensus 523 ~p~i~~V~P~a~~ag~~~~~~v~G~NL~~p~~rllc~~~GkYl~~e 568 (964)
.=.|..++|-+-..+..+.+.|.|.+|.. +.++-|.|.+.-..+|
T Consensus 6 ~~~Itd~sP~~gp~sGGTkv~I~G~~L~~-gs~~~~~fG~~~vpa~ 50 (95)
T 2cxk_A 6 SGMVTDYSPEWSYPEGGVKVLITGPWQEA-SNNYSCLFDQISVPAS 50 (95)
T ss_dssp CSCCCEEECSEECTTCCCEEEEESSCCCC-SSCEEEEETTEEEECE
T ss_pred cEEEEEECCCcccCCCCEEEEEEeECCCC-CccEEEEECCEEEeEE
Confidence 34899999999999999999999999965 4589999988544443
No 121
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=21.33 E-value=1.6e+02 Score=32.68 Aligned_cols=66 Identities=18% Similarity=0.260 Sum_probs=45.9
Q ss_pred ceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEecCcceeeehhccccccccCccccccceEeeeeccCCccCCCce
Q 002122 524 SKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTGRGF 603 (964)
Q Consensus 524 p~i~~V~P~a~~ag~~~~~~v~G~NL~~p~~rllc~~~GkYl~~e~~~~~~~~~~~~~~~~ei~~~~~~~~~P~~~G~~f 603 (964)
|.|..+.|..-. ..+++++.|.|+......+-+.+.|+-... .. .. .+.|. |.+|...+.+-
T Consensus 18 ~~i~~~~P~~g~--~~~~~~i~G~nfg~~~~~~~v~~~~~~~~v--~~--~~-------~~~i~-----~~vp~~~~~g~ 79 (430)
T 3tc9_A 18 VVISEFSPKEGG--LGTRMLLYGENFGSDISKIKVTIGGQDSKV--VG--AK-------GKSLY-----CVVPAKAYDGD 79 (430)
T ss_dssp CEEEEEECSEEC--TTCEEEEEEECCCSCGGGEEEEETTEEECE--EE--EC-------SSEEE-----EECCTTCTTCC
T ss_pred CEEEEEcCCCCC--CCCEEEEEEEcCCCCccceEEEECCEEEEE--EE--EC-------CCEEE-----EEeCCCCCCcc
Confidence 499999999875 578899999999987789999999943221 11 11 23344 55887776554
Q ss_pred eeee
Q 002122 604 IEIE 607 (964)
Q Consensus 604 IEVE 607 (964)
|+|.
T Consensus 80 ~~v~ 83 (430)
T 3tc9_A 80 IKLS 83 (430)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
Done!