Query 002124
Match_columns 964
No_of_seqs 686 out of 5206
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 13:20:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002124.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002124hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 4.1E-34 1.4E-38 327.8 28.5 297 409-737 81-386 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.7E-33 5.8E-38 322.7 28.3 297 409-737 15-320 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 2.4E-32 8.3E-37 302.7 27.3 280 409-715 26-329 (337)
4 1wdy_A 2-5A-dependent ribonucl 100.0 2.2E-31 7.4E-36 284.1 26.0 249 410-715 7-281 (285)
5 3utm_A Tankyrase-1; tankyrase, 100.0 4.1E-31 1.4E-35 290.9 25.2 278 410-712 26-334 (351)
6 1wdy_A 2-5A-dependent ribonucl 100.0 5.7E-30 2E-34 273.0 26.0 239 442-737 4-262 (285)
7 3d9h_A CDNA FLJ77766, highly s 100.0 3E-30 1E-34 280.9 19.6 251 409-711 16-278 (285)
8 1oy3_D Transcription factor in 100.0 1.5E-30 5E-35 278.5 16.7 253 408-701 9-268 (282)
9 2xai_A ASB-9, ankyrin repeat a 100.0 4.6E-30 1.6E-34 275.1 18.0 217 410-713 5-223 (261)
10 3aji_A 26S proteasome non-ATPa 100.0 3.5E-29 1.2E-33 261.0 20.8 218 410-711 8-229 (231)
11 4g8k_A 2-5A-dependent ribonucl 100.0 9.6E-29 3.3E-33 273.8 24.4 253 442-715 24-301 (337)
12 3ljn_A Hypothetical protein; a 100.0 4.9E-30 1.7E-34 287.2 13.9 265 408-710 20-312 (364)
13 4b93_B Ankyrin repeat domain-c 100.0 1.5E-29 5.1E-34 274.4 15.5 210 408-699 11-226 (269)
14 2fo1_E LIN-12 protein; beta-ba 100.0 7.4E-29 2.5E-33 280.4 21.5 266 415-711 73-370 (373)
15 3utm_A Tankyrase-1; tankyrase, 100.0 3.2E-28 1.1E-32 267.9 25.0 247 409-676 59-332 (351)
16 2fo1_E LIN-12 protein; beta-ba 100.0 2E-29 7E-34 285.0 15.7 251 409-676 95-369 (373)
17 2dzn_A Probable 26S proteasome 100.0 1.4E-28 4.6E-33 255.7 20.1 215 410-708 4-226 (228)
18 1yyh_A HN1;, notch 1, ankyrin 100.0 1.6E-28 5.6E-33 261.6 21.1 212 420-676 35-246 (253)
19 1k1a_A B-cell lymphoma 3-encod 100.0 7.8E-29 2.7E-33 259.4 16.9 146 555-711 86-240 (241)
20 3b7b_A Euchromatic histone-lys 100.0 7.7E-28 2.6E-32 251.9 21.8 205 410-699 13-218 (237)
21 1k1a_A B-cell lymphoma 3-encod 100.0 9.1E-29 3.1E-33 258.8 14.4 225 408-676 9-239 (241)
22 3ljn_A Hypothetical protein; a 100.0 1.1E-28 3.7E-33 276.3 12.8 231 436-713 13-270 (364)
23 3b7b_A Euchromatic histone-lys 100.0 1.1E-27 3.9E-32 250.6 19.2 187 408-674 44-231 (237)
24 1yyh_A HN1;, notch 1, ankyrin 100.0 1.9E-27 6.6E-32 253.3 20.0 227 436-710 3-246 (253)
25 1s70_B 130 kDa myosin-binding 100.0 2.9E-28 1E-32 264.0 13.5 214 410-708 42-282 (299)
26 2f8y_A Notch homolog 1, transl 100.0 9.3E-28 3.2E-32 248.9 16.6 213 419-676 2-214 (223)
27 3d9h_A CDNA FLJ77766, highly s 99.9 1.2E-27 3.9E-32 260.5 16.8 218 408-676 59-277 (285)
28 4gpm_A Engineered protein OR26 99.9 1E-26 3.4E-31 235.4 19.8 151 552-713 8-162 (169)
29 3eu9_A Huntingtin-interacting 99.9 8.7E-27 3E-31 242.4 19.3 222 409-713 10-236 (240)
30 1oy3_D Transcription factor in 99.9 2.8E-26 9.7E-31 245.2 21.8 193 526-736 23-266 (282)
31 2rfa_A Transient receptor pote 99.9 1.1E-26 3.9E-31 242.5 16.2 193 410-676 5-220 (232)
32 3eu9_A Huntingtin-interacting 99.9 4.4E-26 1.5E-30 237.1 20.5 208 439-737 5-219 (240)
33 3kea_A K1L; tropism, ANK repea 99.9 6.7E-27 2.3E-31 254.7 13.8 233 418-715 9-249 (285)
34 2f8y_A Notch homolog 1, transl 99.9 1.2E-25 4E-30 233.1 22.3 209 458-714 4-218 (223)
35 1ikn_D Protein (I-kappa-B-alph 99.9 3E-26 1E-30 240.6 13.2 139 563-712 60-209 (236)
36 3hra_A Ankyrin repeat family p 99.9 1.6E-25 5.5E-30 228.3 17.7 188 409-676 6-201 (201)
37 3aji_A 26S proteasome non-ATPa 99.9 2.4E-24 8.4E-29 224.4 24.2 205 510-737 6-214 (231)
38 2xai_A ASB-9, ankyrin repeat a 99.9 1.6E-24 5.4E-29 232.0 22.5 202 510-737 3-208 (261)
39 4b93_B Ankyrin repeat domain-c 99.9 4.3E-25 1.5E-29 239.3 18.1 171 548-737 52-227 (269)
40 4gpm_A Engineered protein OR26 99.9 7.1E-25 2.4E-29 221.8 17.3 158 513-686 7-164 (169)
41 2pnn_A Transient receptor pote 99.9 1.6E-25 5.5E-30 240.5 13.2 146 545-694 98-270 (273)
42 1sw6_A Regulatory protein SWI6 99.9 1.8E-25 6.3E-30 248.3 13.6 256 440-737 20-325 (327)
43 2etb_A Transient receptor pote 99.9 1.1E-25 3.9E-30 239.1 11.2 131 546-676 88-244 (256)
44 1ikn_D Protein (I-kappa-B-alph 99.9 2.5E-25 8.5E-30 233.6 12.9 204 476-697 4-225 (236)
45 2rfa_A Transient receptor pote 99.9 3.1E-24 1.1E-28 224.0 20.5 194 511-714 4-224 (232)
46 2dzn_A Probable 26S proteasome 99.9 7.2E-24 2.5E-28 220.0 21.7 205 511-737 3-217 (228)
47 3hra_A Ankyrin repeat family p 99.9 9.1E-24 3.1E-28 215.3 22.0 186 510-710 5-201 (201)
48 3jxi_A Vanilloid receptor-rela 99.9 4.1E-25 1.4E-29 235.0 10.3 204 410-676 7-248 (260)
49 3kea_A K1L; tropism, ANK repea 99.9 2E-24 6.7E-29 235.2 15.6 157 548-716 62-224 (285)
50 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.5E-23 5.2E-28 209.5 20.0 154 546-710 12-169 (169)
51 4hbd_A KN motif and ankyrin re 99.9 1E-24 3.6E-29 236.5 12.5 194 410-676 78-273 (276)
52 1ihb_A P18-INK4C(INK6), cyclin 99.9 8.4E-24 2.9E-28 208.4 17.4 152 549-712 6-162 (162)
53 1s70_B 130 kDa myosin-binding 99.9 2.9E-23 1E-27 224.7 22.1 214 506-737 36-274 (299)
54 2etb_A Transient receptor pote 99.9 3.4E-24 1.2E-28 227.7 14.3 158 544-712 39-246 (256)
55 2rfm_A Putative ankyrin repeat 99.9 7E-24 2.4E-28 215.8 15.7 155 545-710 32-190 (192)
56 2pnn_A Transient receptor pote 99.9 2.7E-24 9.1E-29 231.0 12.5 159 545-714 51-261 (273)
57 3v31_A Ankyrin repeat family A 99.9 1.9E-23 6.6E-28 207.5 17.6 154 548-712 3-160 (167)
58 3twr_A Tankyrase-2; ankyrin re 99.9 2.3E-23 7.7E-28 206.6 16.8 155 546-711 6-164 (165)
59 3f6q_A Integrin-linked protein 99.9 6.8E-23 2.3E-27 206.4 19.3 154 551-715 8-166 (179)
60 3v30_A DNA-binding protein rfx 99.9 3.4E-23 1.2E-27 206.7 16.1 155 550-715 4-163 (172)
61 1awc_B Protein (GA binding pro 99.9 1.8E-22 6.2E-27 198.0 18.6 145 550-706 4-152 (153)
62 3v30_A DNA-binding protein rfx 99.9 7E-23 2.4E-27 204.4 15.6 168 512-694 4-171 (172)
63 3jxi_A Vanilloid receptor-rela 99.9 5.5E-23 1.9E-27 218.6 15.5 158 546-714 44-252 (260)
64 1sw6_A Regulatory protein SWI6 99.9 1.3E-23 4.5E-28 233.4 10.2 238 389-699 38-324 (327)
65 1d9s_A Cyclin-dependent kinase 99.9 1.6E-22 5.6E-27 194.9 13.5 129 571-711 2-135 (136)
66 2rfm_A Putative ankyrin repeat 99.9 3.7E-22 1.3E-26 203.0 16.3 142 526-676 49-190 (192)
67 4hbd_A KN motif and ankyrin re 99.9 1.2E-22 4.2E-27 220.2 13.3 159 541-710 104-273 (276)
68 1ihb_A P18-INK4C(INK6), cyclin 99.9 4.9E-22 1.7E-26 195.8 16.3 154 511-676 6-160 (162)
69 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8.5E-22 2.9E-26 193.1 17.9 148 549-709 3-155 (156)
70 2vge_A RELA-associated inhibit 99.9 1.1E-23 3.9E-28 222.6 3.8 180 542-737 15-197 (229)
71 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-22 4.1E-27 200.5 10.3 139 546-696 10-149 (156)
72 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.5E-21 5.1E-26 194.9 18.1 156 510-676 14-169 (169)
73 1ycs_B 53BP2, P53BP2; ankyrin 99.9 9E-23 3.1E-27 216.0 9.2 121 550-676 39-162 (239)
74 3f6q_A Integrin-linked protein 99.9 7.2E-22 2.4E-26 198.9 15.2 167 510-691 5-171 (179)
75 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.2E-22 7.6E-27 213.0 11.3 157 547-715 4-167 (239)
76 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.8E-21 6.1E-26 190.8 16.7 153 511-675 3-155 (156)
77 1d9s_A Cyclin-dependent kinase 99.9 4.5E-22 1.5E-26 191.9 11.6 131 539-676 3-134 (136)
78 3v31_A Ankyrin repeat family A 99.9 1.4E-21 4.8E-26 194.0 15.5 155 511-676 4-158 (167)
79 3twr_A Tankyrase-2; ankyrin re 99.9 1.1E-21 3.8E-26 194.3 14.5 159 507-676 5-163 (165)
80 1awc_B Protein (GA binding pro 99.9 6.2E-21 2.1E-25 187.1 17.8 150 511-672 3-152 (153)
81 2jab_A H10-2-G3; HER2, darpin, 99.9 4.2E-21 1.4E-25 185.0 16.1 125 546-676 12-136 (136)
82 3c5r_A BARD-1, BRCA1-associate 99.9 2E-21 6.7E-26 187.1 13.1 126 571-708 1-126 (137)
83 3aaa_C Myotrophin, protein V-1 99.8 1.4E-20 4.8E-25 178.0 13.3 119 578-707 4-122 (123)
84 1n0r_A 4ANK, 4 ankyrin repeats 99.8 3E-20 1E-24 174.1 15.2 123 548-676 2-124 (126)
85 1bi7_B P16INK4A, MTS1, multipl 99.8 6.3E-21 2.2E-25 188.1 11.0 129 575-715 6-139 (156)
86 2jab_A H10-2-G3; HER2, darpin, 99.8 1.9E-20 6.5E-25 180.4 14.1 122 578-710 11-136 (136)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.8 3.6E-20 1.2E-24 173.5 15.5 122 580-712 1-126 (126)
88 3t8k_A Uncharacterized protein 99.8 5.4E-21 1.8E-25 196.2 9.3 146 551-710 10-177 (186)
89 2vge_A RELA-associated inhibit 99.8 9.9E-21 3.4E-25 200.0 11.6 141 564-715 1-151 (229)
90 3t8k_A Uncharacterized protein 99.8 6.4E-21 2.2E-25 195.6 7.9 160 512-689 8-185 (186)
91 3ehr_A Osteoclast-stimulating 99.8 3.7E-20 1.3E-24 192.8 9.5 134 547-691 72-206 (222)
92 3ehr_A Osteoclast-stimulating 99.8 5.9E-20 2E-24 191.3 10.0 127 577-714 69-200 (222)
93 3c5r_A BARD-1, BRCA1-associate 99.8 3.8E-20 1.3E-24 178.1 7.5 126 545-676 7-132 (137)
94 3aaa_C Myotrophin, protein V-1 99.8 1.7E-19 5.8E-24 170.5 11.3 115 547-667 6-120 (123)
95 1n0q_A 3ANK, 3 ankyrin repeats 99.8 4E-19 1.4E-23 160.0 12.6 91 580-676 1-91 (93)
96 2b0o_E UPLC1; arfgap, structur 99.8 6E-19 2E-23 194.4 13.9 134 550-700 153-295 (301)
97 3deo_A Signal recognition part 99.8 9.8E-19 3.3E-23 177.2 12.6 135 546-709 42-181 (183)
98 3lvq_E ARF-GAP with SH3 domain 99.8 2E-18 6.7E-23 203.0 16.9 127 550-687 134-269 (497)
99 2l6b_A NR1C; ankyrin, consensu 99.8 4.4E-19 1.5E-23 165.4 8.6 109 576-695 4-112 (115)
100 3deo_A Signal recognition part 99.8 6.7E-19 2.3E-23 178.4 10.3 112 578-700 41-152 (183)
101 3ui2_A Signal recognition part 99.8 1.4E-18 4.9E-23 184.8 12.7 136 546-710 43-183 (244)
102 3ui2_A Signal recognition part 99.8 1.1E-18 3.8E-23 185.7 11.9 142 506-676 41-183 (244)
103 3jue_A Arfgap with coiled-coil 99.8 2.1E-18 7.3E-23 195.6 14.8 144 548-699 199-345 (368)
104 1dcq_A PYK2-associated protein 99.7 9.3E-18 3.2E-22 182.7 16.1 121 551-677 133-262 (278)
105 2aja_A Ankyrin repeat family p 99.7 5.8E-20 2E-24 209.0 -5.2 122 549-689 129-256 (376)
106 3lvq_E ARF-GAP with SH3 domain 99.7 7.5E-17 2.6E-21 189.5 14.8 124 581-715 132-268 (497)
107 1dcq_A PYK2-associated protein 99.7 2.3E-16 7.8E-21 171.7 16.3 125 580-715 129-266 (278)
108 3jue_A Arfgap with coiled-coil 99.7 1E-16 3.5E-21 181.8 13.7 125 577-712 195-326 (368)
109 2b0o_E UPLC1; arfgap, structur 99.7 1.1E-16 3.6E-21 176.4 13.1 123 579-712 149-284 (301)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.7 1.5E-16 5E-21 143.1 11.4 92 548-639 2-93 (93)
111 2zgd_A 3 repeat synthetic anky 99.7 1.6E-16 5.3E-21 148.0 10.4 93 574-672 17-109 (110)
112 2aja_A Ankyrin repeat family p 99.6 7.2E-18 2.5E-22 191.8 -1.1 147 548-713 92-251 (376)
113 2l6b_A NR1C; ankyrin, consensu 99.6 2.3E-16 7.8E-21 146.9 6.1 107 545-657 6-112 (115)
114 2dfs_A Myosin-5A; myosin-V, in 99.6 6.4E-16 2.2E-20 195.4 7.1 132 785-927 764-897 (1080)
115 2cxk_A Camta1, calmodulin bind 99.6 4.8E-17 1.7E-21 148.9 -5.1 86 377-468 6-91 (95)
116 2dfs_A Myosin-5A; myosin-V, in 99.5 2.5E-15 8.6E-20 190.0 5.9 147 737-924 769-917 (1080)
117 2zgd_A 3 repeat synthetic anky 99.5 1.1E-13 3.7E-18 128.6 11.3 88 546-633 22-109 (110)
118 2ix7_C Myosin-5A; contractIle 99.0 1.2E-10 4.2E-15 96.8 2.8 51 786-836 2-52 (58)
119 1n2d_C IQ2 and IQ3 motifs from 98.6 7.1E-09 2.4E-13 82.7 1.7 43 789-831 3-47 (48)
120 1n2d_C IQ2 and IQ3 motifs from 98.5 3E-08 1E-12 79.1 1.8 44 811-854 2-47 (48)
121 2ix7_C Myosin-5A; contractIle 98.4 1.4E-07 4.8E-12 78.3 3.1 46 810-855 3-48 (58)
122 1kk8_A Myosin heavy chain, str 97.2 0.0001 3.5E-09 91.1 2.2 47 785-831 775-824 (837)
123 1wdc_A Scallop myosin; calcium 97.1 0.00016 5.6E-09 60.9 2.3 45 786-830 3-50 (64)
124 2bl0_A Major plasmodial myosin 97.0 0.00015 5.1E-09 61.0 0.9 38 815-852 7-47 (63)
125 2bl0_A Major plasmodial myosin 97.0 0.00034 1.2E-08 58.8 2.8 45 787-831 2-49 (63)
126 1i84_S Smooth muscle myosin he 96.9 0.0027 9.1E-08 82.1 11.5 45 787-831 790-837 (1184)
127 1wdc_A Scallop myosin; calcium 96.9 0.00048 1.6E-08 58.1 2.8 43 811-853 5-50 (64)
128 1i84_S Smooth muscle myosin he 96.7 0.0017 5.7E-08 84.0 7.7 52 803-854 783-837 (1184)
129 1kk8_A Myosin heavy chain, str 96.6 0.00093 3.2E-08 82.6 4.2 49 807-855 774-825 (837)
130 3muj_A Transcription factor CO 95.1 0.0012 4E-08 63.2 -3.3 71 378-455 6-77 (138)
131 4anj_A Unconventional myosin-V 94.4 0.0011 3.8E-08 83.6 -7.1 45 787-832 773-817 (1052)
132 3mlp_A Transcription factor CO 92.6 0.008 2.7E-07 65.3 -3.3 72 377-455 231-303 (402)
133 2l53_B CAM, voltage-gated sodi 87.0 0.36 1.2E-05 34.6 2.4 21 788-808 5-25 (31)
134 3gn4_A Myosin-VI; unconvention 86.6 0.4 1.4E-05 46.7 3.4 31 812-842 45-75 (148)
135 1w7j_A Myosin VA; motor protei 86.5 0.34 1.2E-05 59.7 3.6 30 786-815 765-794 (795)
136 2kxw_B Sodium channel protein 86.5 0.3 1E-05 33.9 1.7 19 788-806 5-23 (27)
137 2uzx_B Hepatocyte growth facto 85.4 0.16 5.6E-06 62.1 -0.0 74 377-455 635-709 (727)
138 1uad_C RSEC5, exocyst complex 84.5 0.12 4.1E-06 47.1 -1.3 84 377-466 7-93 (99)
139 4anj_A Unconventional myosin-V 83.5 0.4 1.4E-05 60.7 2.3 39 811-850 774-812 (1052)
140 1w7j_A Myosin VA; motor protei 82.9 0.3 1E-05 60.2 0.8 30 809-838 765-794 (795)
141 3gn4_A Myosin-VI; unconvention 78.9 7.8 0.00027 37.7 9.0 18 837-854 47-64 (148)
142 3tc9_A Hypothetical hydrolase; 75.7 0.33 1.1E-05 55.4 -1.9 72 376-453 16-88 (430)
143 2kxw_B Sodium channel protein 73.7 2.6 8.8E-05 29.2 2.9 19 835-853 6-24 (27)
144 2uzx_B Hepatocyte growth facto 73.7 0.38 1.3E-05 58.9 -2.2 90 377-466 541-634 (727)
145 2l53_B CAM, voltage-gated sodi 71.4 3.2 0.00011 29.7 3.0 20 893-912 5-24 (31)
146 3kya_A Putative phosphatase; s 70.1 0.54 1.8E-05 54.9 -1.9 85 376-467 16-103 (496)
147 3hrp_A Uncharacterized protein 60.5 0.69 2.4E-05 52.2 -3.5 73 376-454 16-92 (409)
148 2yrp_A Nuclear factor of activ 59.9 2 6.7E-05 40.1 0.1 91 373-467 4-108 (114)
149 4hw6_A Hypothetical protein, I 58.9 1.1 3.8E-05 51.1 -2.1 72 376-453 18-90 (433)
150 2ycu_A Non muscle myosin 2C, a 54.1 1.6 5.6E-05 55.1 -1.9 22 787-808 785-806 (995)
151 4dck_A Sodium channel protein 45.9 14 0.00048 36.8 3.6 24 787-810 128-151 (168)
152 1g8x_A Myosin II heavy chain f 41.1 53 0.0018 41.6 8.7 43 785-827 759-810 (1010)
153 2f3y_B Voltage-dependent L-typ 27.7 29 0.001 23.5 1.7 18 791-808 4-21 (26)
154 4dck_A Sodium channel protein 26.1 52 0.0018 32.7 4.1 23 893-915 129-151 (168)
155 3dvk_B Voltage-dependent R-typ 25.8 21 0.00073 23.7 0.8 15 791-805 8-22 (23)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.1e-34 Score=327.82 Aligned_cols=297 Identities=15% Similarity=0.126 Sum_probs=255.8
Q ss_pred ccccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHH
Q 002124 409 VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL 488 (964)
Q Consensus 409 ~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhl 488 (964)
.+.+++||..|+.++++.|++.|+. .+..+..|.||||+||.+|+ .+++. ++...+++++..+..| .||||+
T Consensus 81 ~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~~~~~~~~~~~g--~t~L~~ 152 (437)
T 1n11_A 81 QTPLHCAARIGHTNMVKLLLENNAN--PNLATTAGHTPLHIAAREGH--VETVL--ALLEKEASQACMTKKG--FTPLHV 152 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCC--TTCCCTTCCCHHHHHHHHTC--HHHHH--HHHHTTCCSCCCCTTS--CCHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCC--HHHHH--HHHhCCCCCcCCCCCC--CCHHHH
Confidence 3567899999999999999999988 66678889999999999988 78777 5556667777766665 899999
Q ss_pred H-----HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHH
Q 002124 489 H-----LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL 563 (964)
Q Consensus 489 a-----~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~l 563 (964)
| .+++++|+..+++.+..+..|.++++++...++. +.+..|+ .. +.+++..+..+.++++.+...+...+
T Consensus 153 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll-~~--g~~~~~~~~~g~t~L~~A~~~~~~~~ 227 (437)
T 1n11_A 153 AAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL--DIVKLLL-PR--GGSPHSPAWNGYTPLHIAAKQNQVEV 227 (437)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCH--HHHHHHG-GG--TCCSCCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH--HHHHHHH-hC--CCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 8 5788999999988888899999999998776665 7777777 32 23334444567788889999999999
Q ss_pred HHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 002124 564 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL 643 (964)
Q Consensus 564 vk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~ 643 (964)
++.|++.|++++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 228 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~- 306 (437)
T 1n11_A 228 ARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA- 306 (437)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC-
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCCCCCCCc
Q 002124 644 TDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDE 719 (964)
Q Consensus 644 ~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~~~~d~ 719 (964)
+|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .++|++|++.|++++..
T Consensus 307 -----~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~--- 373 (437)
T 1n11_A 307 -----TTRMGYTPLHVASHYGNIKLVKFLLQHQ-----ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEV--- 373 (437)
T ss_dssp -----CCSSCCCHHHHHHHSSCSHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCC---
T ss_pred -----CCCCCCCHHHHHHHcCcHHHHHHHHhcC-----CCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCC---
Confidence 4579999999999999999999999999 899999999999999985 79999999999977652
Q ss_pred cccccccccchhhhhhhh
Q 002124 720 SDVLSLKDSLTAICNATQ 737 (964)
Q Consensus 720 ~~~l~Lkd~ltA~~~Aaq 737 (964)
.+++.++++.|.+
T Consensus 374 -----~~~g~t~l~~A~~ 386 (437)
T 1n11_A 374 -----SSDGTTPLAIAKR 386 (437)
T ss_dssp -----CSSSCCHHHHHHH
T ss_pred -----CCCCCCHHHHHHH
Confidence 3466777776654
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-33 Score=322.73 Aligned_cols=297 Identities=14% Similarity=0.118 Sum_probs=260.2
Q ss_pred ccccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHH
Q 002124 409 VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL 488 (964)
Q Consensus 409 ~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhl 488 (964)
.+.+|+||.+|++++++.|++.|+. .+..+..|.||||+||.+|+ .++++ |+...+++++..+.+| .||||+
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~~~~~~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~ 86 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGAS--PNVSNVKVETPLHMAARAGH--TEVAK--YLLQNKAKVNAKAKDD--QTPLHC 86 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC--SCCSSSCCCCHHHHHHHHTC--HHHHH--HHHHHTCCSSCCCTTS--CCHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCC--HHHHH--HHHhCCCCCCCCCCCC--CCHHHH
Confidence 4678999999999999999999988 66678899999999999999 88888 5666788999888877 999999
Q ss_pred H-----HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHH
Q 002124 489 H-----LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL 563 (964)
Q Consensus 489 a-----~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~l 563 (964)
| ..++++|+..+++.+..+..|.++++++...+.. +.+..|+ .. ..+....+..+.++++.+...+...+
T Consensus 87 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll-~~--~~~~~~~~~~g~t~L~~A~~~g~~~~ 161 (437)
T 1n11_A 87 AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV--ETVLALL-EK--EASQACMTKKGFTPLHVAAKYGKVRV 161 (437)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCH--HHHHHHH-HT--TCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH--HHHHHHH-hC--CCCCcCCCCCCCCHHHHHHHcCCHHH
Confidence 9 5789999999999999999999999999877765 7778887 32 22333334567788999999999999
Q ss_pred HHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 002124 564 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL 643 (964)
Q Consensus 564 vk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~ 643 (964)
+++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.
T Consensus 162 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~- 240 (437)
T 1n11_A 162 AELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA- 240 (437)
T ss_dssp HHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-
T ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCCCCCCCc
Q 002124 644 TDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDE 719 (964)
Q Consensus 644 ~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~~~~d~ 719 (964)
++..|.||||+|+..|+.+++++|+++| ++++..|..|.||++.+. .++++.|+++|+..+..
T Consensus 241 -----~~~~g~t~L~~A~~~g~~~~v~~Ll~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~--- 307 (437)
T 1n11_A 241 -----ESVQGVTPLHLAAQEGHAEMVALLLSKQ-----ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDAT--- 307 (437)
T ss_dssp -----CCTTCCCHHHHHHHTTCHHHHHHHHTTT-----CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCC---
T ss_pred -----CCCCCCCHHHHHHHCCCHHHHHHHHhcC-----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCC---
Confidence 4579999999999999999999999999 888999999999999985 68999999999866542
Q ss_pred cccccccccchhhhhhhh
Q 002124 720 SDVLSLKDSLTAICNATQ 737 (964)
Q Consensus 720 ~~~l~Lkd~ltA~~~Aaq 737 (964)
...+.++++.|+.
T Consensus 308 -----~~~g~t~L~~A~~ 320 (437)
T 1n11_A 308 -----TRMGYTPLHVASH 320 (437)
T ss_dssp -----CSSCCCHHHHHHH
T ss_pred -----CCCCCCHHHHHHH
Confidence 3456677777654
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.4e-32 Score=302.70 Aligned_cols=280 Identities=14% Similarity=0.026 Sum_probs=233.2
Q ss_pred ccccchhhhcCChHHHHHHHHcCCCCCCCCCC-CCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHH
Q 002124 409 VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPH-AVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESF 487 (964)
Q Consensus 409 ~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~-~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lh 487 (964)
.+.++.||..|++++|+.||+.|++ ++..+ ..|+||||+||..|+ .++++ +++..|++++..+..+ .++++
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gad--vn~~~~~~g~TpLh~A~~~g~--~~iv~--~Ll~~ga~~~~~~~~~--~~~~~ 97 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSR--EDIVE--LLLRHGADPVLRKKNG--ATPFI 97 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCC--TTCCCTTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCC--CCccCCCCCcCHHHHHHHcCC--HHHHH--HHHHcCCchhhhccCC--CchhH
Confidence 3567999999999999999999998 55554 459999999999999 89988 6677889999888776 88888
Q ss_pred HH-----HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCC--------CccccccchHHHHH
Q 002124 488 LH-----LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKN--------LSQHVEKYQILQKI 554 (964)
Q Consensus 488 la-----~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~--------is~~~~~~~~ll~~ 554 (964)
.+ ..+..++...+.+.+..+..|.++++++...+.. +.+..++ ....+.+ ....+..+.++++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~--~~~~~ll-~~ga~~~~~~~~~~~~~~~~~~g~T~L~~ 174 (337)
T 4g8k_A 98 LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV--KALKFLY-KRGANVNLRRKTKEDQERLRKGGATALMD 174 (337)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCH--HHHHHHH-HTTCCTTCCCCCC-----CTTCSCCHHHH
T ss_pred HHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcH--HHHHHHH-HcCCCcchhhccccccccccCCCCcHHHH
Confidence 77 4667777888888899999999999998766654 6667666 3222211 11223456788999
Q ss_pred HHHhCHHHHHHHHHH-CCCCCCccCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHH
Q 002124 555 MKEKLYSWLLRKVCE-DGKGPCILDDEGQGVLHLAASLGY----DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT 629 (964)
Q Consensus 555 a~~~~~~~lvk~Ll~-~gad~n~~D~~G~TpLHlAa~~G~----~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~ei 629 (964)
++..++..++++|++ .|+++|.+|..|.|+||+++..+. ..++++|+++|+++|.+|..|+||||+|+..|+.++
T Consensus 175 A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~ 254 (337)
T 4g8k_A 175 AAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGL 254 (337)
T ss_dssp HHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHH
T ss_pred HHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHH
Confidence 999999999999995 699999999999999999887654 458899999999999999999999999999999999
Q ss_pred HHHHHHc-CCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHH
Q 002124 630 VAVLLSL-GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQ 704 (964)
Q Consensus 630 V~~LL~~-GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~ 704 (964)
++.|+.. |++++. +|..|+||||+|+..|+.++|++|+++| +++|.+ +|++.|. .++|+
T Consensus 255 v~~Ll~~~~~~vn~------~d~~G~TpL~~A~~~g~~~iv~~Ll~~G-----Ad~n~~-----~~L~~A~~~~~~~iv~ 318 (337)
T 4g8k_A 255 VQRLLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRG-----ASTDCG-----DLVMTARRNYDHSLVK 318 (337)
T ss_dssp HHHHHTSTTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHTTS-----CSSTTC-----CHHHHHHHTTCHHHHH
T ss_pred HHHHHHhcCCcccC------cCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCC-----CHHHHHHHcCCHHHHH
Confidence 9999985 888887 4579999999999999999999999999 777654 5888874 69999
Q ss_pred HHHHccCCCCC
Q 002124 705 TVSEKTATPAN 715 (964)
Q Consensus 705 ~Lle~ga~~~~ 715 (964)
+|+++||+++-
T Consensus 319 ~Ll~~GA~~d~ 329 (337)
T 4g8k_A 319 VLLSHGAKEDF 329 (337)
T ss_dssp HHHHTTCCC--
T ss_pred HHHHCcCCCCC
Confidence 99999997763
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.98 E-value=2.2e-31 Score=284.06 Aligned_cols=249 Identities=18% Similarity=0.127 Sum_probs=183.8
Q ss_pred cccchhhhcCChHHHHHHHHcCCCCCCCCC-CCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHH
Q 002124 410 AKCKWSCMFAEVEVPAEVLADGVLCCRIPP-HAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL 488 (964)
Q Consensus 410 ~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~-~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhl 488 (964)
+.+++||..|++++++.|++.|+. .+.. +..|+||||+||..|+ .++++ ++...+++++..+.+| .||||+
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~ 78 (285)
T 1wdy_A 7 HLLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSR--EDIVE--LLLRHGADPVLRKKNG--ATPFLL 78 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCC--cccccCCCCCcHHHHHHHcCC--HHHHH--HHHHcCCCCcccCCCC--CCHHHH
Confidence 467899999999999999999987 4444 7789999999999999 88888 6667788888887776 899998
Q ss_pred HH-----HHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHH
Q 002124 489 HL-----RLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL 563 (964)
Q Consensus 489 a~-----rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~l 563 (964)
|+ .++++|+..+++.+..+ ..+.++++.+...+...+
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~~--------------------------------------~~g~t~L~~A~~~~~~~~ 120 (285)
T 1wdy_A 79 AAIAGSVKLLKLFLSKGADVNECD--------------------------------------FYGFTAFMEAAVYGKVKA 120 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCBC--------------------------------------TTCCBHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccC--------------------------------------cccCCHHHHHHHhCCHHH
Confidence 85 44444444444333333 444455555555566667
Q ss_pred HHHHHHCCCCCCcc----------CCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCcccCCCCChHHHHHHHcCC----HH
Q 002124 564 LRKVCEDGKGPCIL----------DDEGQGVLHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGR----EK 628 (964)
Q Consensus 564 vk~Ll~~gad~n~~----------D~~G~TpLHlAa~~G~~~iVk~LL~~-Gadvn~~D~~G~TPLH~Aa~~G~----~e 628 (964)
+++|++.|++++.. +..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+ .+
T Consensus 121 ~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 200 (285)
T 1wdy_A 121 LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEA 200 (285)
T ss_dssp HHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHH
T ss_pred HHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHH
Confidence 77777777777666 66677777777777777777777775 77777777777777777777777 77
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcccCCccCCCCCCcHHHHhh----HhHH
Q 002124 629 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE-SSLTSLLLSLKMNDSADDGALEDSI----AKAV 703 (964)
Q Consensus 629 iV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe-~G~~~~ladvn~~d~~G~tpl~~a~----~~iv 703 (964)
++++|+++|++++. +|..|.||||+|+..|+.+++++|++ .| ++++.+|..|.||+++|. .+++
T Consensus 201 i~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g-----~~~~~~~~~g~t~l~~A~~~~~~~i~ 269 (285)
T 1wdy_A 201 ITHLLLDHGADVNV------RGERGKTPLILAVEKKHLGLVQRLLEQEH-----IEINDTDSDGKTALLLAVELKLKKIA 269 (285)
T ss_dssp HHHHHHHTTCCSSC------CCTTSCCHHHHHHHTTCHHHHHHHHHSSS-----CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCCCCC------cCCCCCcHHHHHHHcCCHHHHHHHHhccC-----CCccccCCCCCcHHHHHHHcCcHHHH
Confidence 77777777777766 34577777777777777777777777 56 677777777777777773 5777
Q ss_pred HHHHHccCCCCC
Q 002124 704 QTVSEKTATPAN 715 (964)
Q Consensus 704 ~~Lle~ga~~~~ 715 (964)
++|+++|+++..
T Consensus 270 ~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 270 ELLCKRGASTDC 281 (285)
T ss_dssp HHHHHHSSCSCC
T ss_pred HHHHHcCCCCCc
Confidence 777777776654
No 5
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=4.1e-31 Score=290.92 Aligned_cols=278 Identities=14% Similarity=0.019 Sum_probs=220.1
Q ss_pred cccchhhhcCChHHHHHHHHc-CCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHH
Q 002124 410 AKCKWSCMFAEVEVPAEVLAD-GVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL 488 (964)
Q Consensus 410 ~~~~~Ac~fG~veVv~~LL~~-GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhl 488 (964)
+.+++||..|+.+++..|+.. |+. .+..+..|.||||+||..|+ .++++ ++...+++++..|..| .||||+
T Consensus 26 ~~L~~A~~~g~~~~v~~ll~~~~~~--~~~~d~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~ 97 (351)
T 3utm_A 26 DELLEAARSGNEEKLMALLTPLNVN--CHASDGRKSTPLHLAAGYNR--VRIVQ--LLLQHGADVHAKDKGG--LVPLHN 97 (351)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTT--CCCSSTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHH
T ss_pred hhHHHHHHcCCHHHHHHHHHhcCCC--cccCCCCCCCHHHHHHHcCC--HHHHH--HHHHcCCCCCccCCCC--CcHHHH
Confidence 467888888888888877765 555 55667788888888888888 77777 5566678888887766 888888
Q ss_pred H-----HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccc---------------
Q 002124 489 H-----LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKY--------------- 548 (964)
Q Consensus 489 a-----~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~--------------- 548 (964)
| ..++++|+..+++.+..+..|.++++++...+.. +.++.|+ ... .+++..+..+
T Consensus 98 A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll-~~g--~~~~~~~~~g~~~l~~a~~~~~~~~ 172 (351)
T 3utm_A 98 ACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRV--EVCSLLL-SHG--ADPTLVNCHGKSAVDMAPTPELRER 172 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH--HHHHHHH-HTT--CCTTCCCTTSCCHHHHCSSHHHHHH
T ss_pred HHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH--HHHHHHH-HcC--CCCccccCCCCcchHHHhhhhhHHH
Confidence 8 5778888888888888888888888888766554 6777777 322 2222222222
Q ss_pred -------hHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCcccCCCCChHH
Q 002124 549 -------QILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASL---GYDWAIKPTVTAGVSINFRDLSGWTAL 618 (964)
Q Consensus 549 -------~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~---G~~~iVk~LL~~Gadvn~~D~~G~TPL 618 (964)
..+..++..... ..+..++..+......+..|.||||+|+.. +..+++++|++.|+++|.+|..|+|||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 251 (351)
T 3utm_A 173 LTYEFKGHSLLQAAREADL-AKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPL 251 (351)
T ss_dssp HHHHHHHHHHHHHHHTTCH-HHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred HHhhhcccHHHHHHHhccH-HHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHH
Confidence 223344444444 444555555555555778899999999999 558999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHh
Q 002124 619 HWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDS 698 (964)
Q Consensus 619 H~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a 698 (964)
|+|+..|+.+++++|+++|++++. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||++++
T Consensus 252 ~~A~~~g~~~~v~~Ll~~ga~~n~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----ad~~~~~~~g~tal~~a 320 (351)
T 3utm_A 252 HVAAERAHNDVMEVLHKHGAKMNA------LDSLGQTALHRAALAGHLQTCRLLLSYG-----SDPSIISLQGFTAAQMG 320 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHS
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHcCcHHHHHHHHHcC-----CCCCCcCCCCCChhhhh
Confidence 999999999999999999999988 4579999999999999999999999999 89999999999999999
Q ss_pred hHhHHHHHHHccCC
Q 002124 699 IAKAVQTVSEKTAT 712 (964)
Q Consensus 699 ~~~iv~~Lle~ga~ 712 (964)
...+++.|.+.+..
T Consensus 321 ~~~~~~~l~~~~~~ 334 (351)
T 3utm_A 321 NEAVQQILSESTPM 334 (351)
T ss_dssp CHHHHHHHHHC---
T ss_pred hHHHHHHHHhcccc
Confidence 99999999988753
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=5.7e-30 Score=273.03 Aligned_cols=239 Identities=17% Similarity=0.088 Sum_probs=195.1
Q ss_pred CCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHHHHHHHHHhhCCCCCCCCccccccHHHHHHHHh
Q 002124 442 VGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKII 521 (964)
Q Consensus 442 ~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~ 521 (964)
.|.||||.|+..|+ .++++ ++...+++++..+..+ +.||||+|+...+
T Consensus 4 ~g~~~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~~-g~t~L~~A~~~g~--------------------------- 51 (285)
T 1wdy_A 4 EDNHLLIKAVQNED--VDLVQ--QLLEGGANVNFQEEEG-GWTPLHNAVQMSR--------------------------- 51 (285)
T ss_dssp HHHHHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTT-CCCHHHHHHHTTC---------------------------
T ss_pred ccchHHHHHHHcCC--HHHHH--HHHHcCCCcccccCCC-CCcHHHHHHHcCC---------------------------
Confidence 58899999999999 78877 5666778888773333 5899998854211
Q ss_pred hhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHH
Q 002124 522 QLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTV 601 (964)
Q Consensus 522 ~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL 601 (964)
.+.++.|+ .. +.+++..+..+.++++.+...+...++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 52 ---~~~v~~Ll-~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 125 (285)
T 1wdy_A 52 ---EDIVELLL-RH--GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY 125 (285)
T ss_dssp ---HHHHHHHH-HT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH
T ss_pred ---HHHHHHHH-Hc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHH
Confidence 13333344 11 2223333344566667777777788999999999999999999999999999999999999999
Q ss_pred hCCCCCccc----------CCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCCHHHHHHHcCC----H
Q 002124 602 TAGVSINFR----------DLSGWTALHWAAYCGREKTVAVLLSL-GAAPGLLTDPSPEFPLSRTPSDLASSNGH----K 666 (964)
Q Consensus 602 ~~Gadvn~~----------D~~G~TPLH~Aa~~G~~eiV~~LL~~-GAdvn~~~d~~~~D~~G~TPLhlAa~~G~----~ 666 (964)
+.|++++.+ +..|.||||+|+..|+.+++++|++. |++++. +|..|+||||+|+..|+ .
T Consensus 126 ~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~------~~~~g~t~l~~a~~~~~~~~~~ 199 (285)
T 1wdy_A 126 KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA------CDNMGRNALIHALLSSDDSDVE 199 (285)
T ss_dssp HTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTC------CCTTSCCHHHHHHHCSCTTTHH
T ss_pred HhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCc------cCCCCCCHHHHHHHccccchHH
Confidence 999999987 78899999999999999999999997 999887 45799999999999999 9
Q ss_pred HHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHH-ccCCCCCCCCccccccccccchhhhhhhh
Q 002124 667 GISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSE-KTATPANDNDESDVLSLKDSLTAICNATQ 737 (964)
Q Consensus 667 eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle-~ga~~~~~~d~~~~l~Lkd~ltA~~~Aaq 737 (964)
+++++|+++| ++++.+|..|.||+|+|. .++++.|++ .|++++.. ...+.++++.|++
T Consensus 200 ~i~~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~--------~~~g~t~l~~A~~ 262 (285)
T 1wdy_A 200 AITHLLLDHG-----ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT--------DSDGKTALLLAVE 262 (285)
T ss_dssp HHHHHHHHTT-----CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCC--------CTTSCCHHHHHHH
T ss_pred HHHHHHHHcC-----CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcccc--------CCCCCcHHHHHHH
Confidence 9999999999 899999999999999984 699999999 78765542 3466788888875
No 7
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=3e-30 Score=280.88 Aligned_cols=251 Identities=10% Similarity=-0.053 Sum_probs=186.2
Q ss_pred ccccchhhhcCChHHHHHHHHcCC---------CCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCC
Q 002124 409 VAKCKWSCMFAEVEVPAEVLADGV---------LCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIY 479 (964)
Q Consensus 409 ~~~~~~Ac~fG~veVv~~LL~~Gv---------lrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~ 479 (964)
.+.+||||+.|+...+..++..+. .......+..|+||||+||..|+ .++++ +++..+++++..|.+
T Consensus 16 ~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~--~~~v~--~Ll~~g~~~~~~~~~ 91 (285)
T 3d9h_A 16 PRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGH--QLSLR--NLISQGWAVNIITAD 91 (285)
T ss_dssp --------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTC--HHHHH--HHHHTTCCSCEECTT
T ss_pred HHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCC--HHHHH--HHHHCCCCCCCcCCC
Confidence 357899999999877776655431 11234458889999999999999 78877 566678889988887
Q ss_pred CCCccHHHHHHHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhC
Q 002124 480 GSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKL 559 (964)
Q Consensus 480 g~~~t~Lhla~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~ 559 (964)
| .||||+|+.... .+.++.|+ .. +.+++..+..+.++++.+...+
T Consensus 92 g--~t~L~~A~~~g~------------------------------~~~v~~Ll-~~--ga~~~~~~~~g~t~L~~A~~~~ 136 (285)
T 3d9h_A 92 H--VSPLHEACLGGH------------------------------LSCVKILL-KH--GAQVNGVTADWHTPLFNACVSG 136 (285)
T ss_dssp C--CCHHHHHHHTTC------------------------------HHHHHHHH-HT--TCCSSCCCTTCCCHHHHHHHHT
T ss_pred C--CCHHHHHHHCCc------------------------------HHHHHHHH-HC--CCCCCCCCCCCCCHHHHHHHcC
Confidence 7 899998854211 12333343 11 2333334455566667777777
Q ss_pred HHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q 002124 560 YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAA 639 (964)
Q Consensus 560 ~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAd 639 (964)
...++++|++.|++++..+ .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 137 ~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 215 (285)
T 3d9h_A 137 SWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD 215 (285)
T ss_dssp CHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC
Confidence 7889999999999998654 599999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh--HhHHHHHHHc-cC
Q 002124 640 PGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI--AKAVQTVSEK-TA 711 (964)
Q Consensus 640 vn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~--~~iv~~Lle~-ga 711 (964)
++. |..|.||||+|+..|+.+++++|+++| ++++.+|..|.||++++. .++++.|+++ ++
T Consensus 216 ~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~t~l~~A~~~~~~~~~Ll~~~~a 278 (285)
T 3d9h_A 216 VNQ-------GKGQDSPLHAVVRTASEELACLLMDFG-----ADTQAKNAEGKRPVELVPPESPLAQLFLEREGA 278 (285)
T ss_dssp TTC-------CBTTBCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCGGGGSCTTSHHHHHHHHHC--
T ss_pred CCC-------CCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHHhcCccHHHHHHHHhhcc
Confidence 874 368999999999999999999999999 899999999999999994 7899999998 54
No 8
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=1.5e-30 Score=278.53 Aligned_cols=253 Identities=11% Similarity=-0.004 Sum_probs=182.3
Q ss_pred cccccchhhhcCChHHHHHHHHcCCCCC-CCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHH
Q 002124 408 EVAKCKWSCMFAEVEVPAEVLADGVLCC-RIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSES 486 (964)
Q Consensus 408 ~~~~~~~Ac~fG~veVv~~LL~~GvlrC-~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~L 486 (964)
..+.+|+||..|+.++++.|++.|.... .+..+..|+||||+||..|+ .++++ +++..|++++..+..| .|||
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~ga~~~~~~~~g--~tpL 82 (282)
T 1oy3_D 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE--ASTVE--KLYAAGAGVLVAERGG--HTAL 82 (282)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTC--HHHHH--HHHHTTCCSSCCCTTS--CCHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCC--HHHHH--HHHHcCCCCCCCCCCC--CCHH
Confidence 4578899999999999999999987643 55678899999999999999 88888 5667789999888876 9999
Q ss_pred HHH-----HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHH
Q 002124 487 FLH-----LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYS 561 (964)
Q Consensus 487 hla-----~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~ 561 (964)
|+| ..++++|+..+............ . .. ..... ......+...+......
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~----~-~~------------------~~~~~-~~~~~~~~~~~~~~~~~ 138 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYL----T-QS------------------QDCTP-DTSHAPAAVDSQPNPEN 138 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC------------------------------------------------------
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHh----h-cc------------------cccCc-chhcchhhhccccccch
Confidence 999 57889998877443222111000 0 00 00000 00011122222222233
Q ss_pred HHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-CChHHHHHHHcCCHHHHHHHHHcCCCC
Q 002124 562 WLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLS-GWTALHWAAYCGREKTVAVLLSLGAAP 640 (964)
Q Consensus 562 ~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~-G~TPLH~Aa~~G~~eiV~~LL~~GAdv 640 (964)
.+...+...+++++.+|..|.||||+||..|+.++|++|+++|++++.++.. |+||||+|+..|+.++|++|+++|+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~ 218 (282)
T 1oy3_D 139 EEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP 218 (282)
T ss_dssp -----CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred hhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 3445556677889999999999999999999999999999999999999854 999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhhHh
Q 002124 641 GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAK 701 (964)
Q Consensus 641 n~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~~~ 701 (964)
+. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||++.+...
T Consensus 219 ~~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~a~~~ 268 (282)
T 1oy3_D 219 TA------RMYGGRTPLGSALLRPNPILARLLRAHG-----APEPEDGGDKLSPCSSSGSD 268 (282)
T ss_dssp TC------CCTTSCCHHHHHHTSSCHHHHHHHHHTT-----CCCCCCC-------------
T ss_pred cc------cccCCCCHHHHHHHcCCcHHHHHHHHcC-----CCcCcCCCcccccccccCCc
Confidence 88 5579999999999999999999999999 89999999999999987643
No 9
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=4.6e-30 Score=275.11 Aligned_cols=217 Identities=12% Similarity=0.024 Sum_probs=175.3
Q ss_pred cccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHH
Q 002124 410 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH 489 (964)
Q Consensus 410 ~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla 489 (964)
+.+|+||..|+.++++.|++.|++ .+..+..|.||||+||..|+ .++++ ++...+++++..|.+| .||||+|
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A 76 (261)
T 2xai_A 5 SPMHEAAIHGHQLSLRNLISQGWA--VNIITADHVSPLHEACLGGH--LSCVK--ILLKHGAQVNGVTADW--HTPLFNA 76 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC--SSCCCTTCCCHHHHHHHHTC--HHHHH--HHHHTTCCTTCCCTTS--CCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHcCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHH
Confidence 567899999999999999999887 66778889999999998888 77777 5555677777776665 6766655
Q ss_pred HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHH
Q 002124 490 LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE 569 (964)
Q Consensus 490 ~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~ 569 (964)
+. .+...++++|++
T Consensus 77 ~~------------------------------------------------------------------~~~~~~v~~Ll~ 90 (261)
T 2xai_A 77 CV------------------------------------------------------------------SGSWDCVNLLLQ 90 (261)
T ss_dssp HH------------------------------------------------------------------HTCHHHHHHHHH
T ss_pred HH------------------------------------------------------------------cCCHHHHHHHHH
Confidence 43 222346677778
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 002124 570 DGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE 649 (964)
Q Consensus 570 ~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~ 649 (964)
.|++++. +..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 91 ~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 162 (261)
T 2xai_A 91 HGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ------- 162 (261)
T ss_dssp TTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-------
T ss_pred CCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-------
Confidence 8888875 44588999999999999999999999999998899999999999999999999999999988874
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh--HhHHHHHHHccCCC
Q 002124 650 FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI--AKAVQTVSEKTATP 713 (964)
Q Consensus 650 D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~--~~iv~~Lle~ga~~ 713 (964)
|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||++++. ..+++.|++++..+
T Consensus 163 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~tpl~~A~~~~~~~~~ll~~~~~~ 223 (261)
T 2xai_A 163 GKGQDSPLHAVARTASEELACLLMDFG-----ADTQAKNAEGKRPVELVPPESPLAQLFLEREGPP 223 (261)
T ss_dssp CBTTBCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCGGGGSCTTCTHHHHHHHC-CCC
T ss_pred CCCCCChHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCChhhhccccccHHHHHHhccCCc
Confidence 358889999999999999999999888 888888888999988884 57888888876543
No 10
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=3.5e-29 Score=261.04 Aligned_cols=218 Identities=17% Similarity=0.128 Sum_probs=186.6
Q ss_pred cccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHH
Q 002124 410 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH 489 (964)
Q Consensus 410 ~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla 489 (964)
+.+++||..|++++++.|+..+.. .....+..|.||||+||..|+ .++++ ++...+++++..|..| +||||+|
T Consensus 8 ~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A 80 (231)
T 3aji_A 8 IMICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSAGH--TEIVE--FLLQLGVPVNDKDDAG--WSPLHIA 80 (231)
T ss_dssp SHHHHHHHHTCHHHHHHHHHHCGG-GGGCCCTTSCCHHHHHHHHTC--HHHHH--HHHHTTCCSCCCCTTS--CCHHHHH
T ss_pred chHHHHHHhCCHHHHHHHHHhchh-hhhcCCCCCCCHHHHHHHcCc--HHHHH--HHHHhCCCCCCcCCCC--CCHHHHH
Confidence 457899999999999999988754 245568899999999999998 78877 5556677777776665 7777654
Q ss_pred HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHH
Q 002124 490 LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE 569 (964)
Q Consensus 490 ~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~ 569 (964)
+. .+...++++|++
T Consensus 81 ~~------------------------------------------------------------------~~~~~~v~~Ll~ 94 (231)
T 3aji_A 81 AS------------------------------------------------------------------AGXDEIVKALLV 94 (231)
T ss_dssp HH------------------------------------------------------------------HTCHHHHHHHHH
T ss_pred HH------------------------------------------------------------------cCHHHHHHHHHH
Confidence 43 122346778888
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 002124 570 DGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE 649 (964)
Q Consensus 570 ~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~ 649 (964)
+|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++. +
T Consensus 95 ~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~ 168 (231)
T 3aji_A 95 KGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI------Q 168 (231)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC------C
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc------c
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999887 4
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccC
Q 002124 650 FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTA 711 (964)
Q Consensus 650 D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga 711 (964)
|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. ..++++|.++++
T Consensus 169 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 169 DTEGNTPLHLACDEERVEEAKFLVTQG-----ASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence 579999999999999999999999999 889999999999999983 577888888775
No 11
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=9.6e-29 Score=273.81 Aligned_cols=253 Identities=15% Similarity=0.059 Sum_probs=218.0
Q ss_pred CCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHH-----HHHHHHHhhCCCCCCCCccccccHHHH
Q 002124 442 VGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH-----LRLERILSMRSSPQNHLSEGLCEKQKL 516 (964)
Q Consensus 442 ~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla-----~rlvkLLl~~~~~~~~~~~~g~~~l~l 516 (964)
.|.||||.||.+|+ .++|+ +++..|+++|..+.++ ++||||+| ..++++|+..+++.+..+..+.++++.
T Consensus 24 ~~~t~L~~Av~~g~--~~~V~--~LL~~Gadvn~~~~~~-g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~ 98 (337)
T 4g8k_A 24 EDNHLLIKAVQNED--VDLVQ--QLLEGGANVNFQEEEG-GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFIL 98 (337)
T ss_dssp HHHHHHHHHHHTTC--HHHHH--HHHHHTCCTTCCCTTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred CCChHHHHHHHcCC--HHHHH--HHHHCCCCCCccCCCC-CcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHH
Confidence 47899999999999 89988 5667789999987765 69999999 579999999999999999999999988
Q ss_pred HHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCcc----------CCCCCcHHH
Q 002124 517 ISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCIL----------DDEGQGVLH 586 (964)
Q Consensus 517 a~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~----------D~~G~TpLH 586 (964)
+...... .....++ ....+++..+..+.++++.+...+...+++.|++.|++++.. +..|.||||
T Consensus 99 ~~~~~~~--~~~~~~~---~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~ 173 (337)
T 4g8k_A 99 AAIAGSV--KLLKLFL---SKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM 173 (337)
T ss_dssp HHHHTCH--HHHHHHH---TTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHH
T ss_pred HHhcccc--hhhHHhh---hccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHH
Confidence 8665544 3344343 345566666778889999999999999999999999998764 446899999
Q ss_pred HHHHcCCHHHHHHHHh-CCCCCcccCCCCChHHHHHHHcCC----HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 002124 587 LAASLGYDWAIKPTVT-AGVSINFRDLSGWTALHWAAYCGR----EKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLAS 661 (964)
Q Consensus 587 lAa~~G~~~iVk~LL~-~Gadvn~~D~~G~TPLH~Aa~~G~----~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa 661 (964)
+||..|+.++|++||+ .|+++|.+|..|+||||+++..++ ..++++|+++|++++. +|..|+||||+|+
T Consensus 174 ~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~------~d~~g~t~L~~a~ 247 (337)
T 4g8k_A 174 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV------RGERGKTPLILAV 247 (337)
T ss_dssp HHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTC------CCGGGCCHHHHHH
T ss_pred HHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCC------cCCCCCCHHHHHH
Confidence 9999999999999996 699999999999999999887654 4688999999999988 4579999999999
Q ss_pred HcCCHHHHHHHHHc-CCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCCCC
Q 002124 662 SNGHKGISGFLAES-SLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPAN 715 (964)
Q Consensus 662 ~~G~~eiv~~LLe~-G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~~ 715 (964)
..|+.+++++|++. | ++++.+|..|+||||+|. .++|++|+++|++++.
T Consensus 248 ~~~~~~~v~~Ll~~~~-----~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 248 EKKHLGLVQRLLEQEH-----IEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp HTTCHHHHHHHHTSTT-----CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT
T ss_pred HhhhhHHHHHHHHhcC-----CcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 99999999999986 5 899999999999999985 6999999999997653
No 12
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=4.9e-30 Score=287.24 Aligned_cols=265 Identities=13% Similarity=0.078 Sum_probs=204.0
Q ss_pred cccccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHH
Q 002124 408 EVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESF 487 (964)
Q Consensus 408 ~~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lh 487 (964)
..+.+|+||..|++++++.|++.|++ .+..+..|+||||+||.+|+ .++++ +++..+++++. .+ +.||||
T Consensus 20 g~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~--~~--g~t~L~ 89 (364)
T 3ljn_A 20 NMEKIHVAARKGQTDEVRRLIETGVS--PTIQNRFGCTALHLACKFGC--VDTAK--YLASVGEVHSL--WH--GQKPIH 89 (364)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHCC--HHHHH--HHHHHCCCCCC--BT--TBCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC--ccccCCCCCcHHHHHHHcCC--HHHHH--HHHHCCCCccc--cC--CCCHHH
Confidence 45688999999999999999999988 77788999999999999999 89888 45555564443 34 499999
Q ss_pred HH-----HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcC-----CCCCCccccccchHHHHHHHH
Q 002124 488 LH-----LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEAN-----PEKNLSQHVEKYQILQKIMKE 557 (964)
Q Consensus 488 la-----~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~-----~~~~is~~~~~~~~ll~~a~~ 557 (964)
+| ..++++|+..+.. .. .....++ ... .....+..+..+.++++.++.
T Consensus 90 ~A~~~g~~~~v~~Ll~~~~~-----------------~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 147 (364)
T 3ljn_A 90 LAVMANKTDLVVALVEGAKE-----------------RG----QMPESLL-NECDEREVNEIGSHVKHCKGQTALHWCVG 147 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHH-----------------HT----CCHHHHH-TCCCCCCEEEETTEEEEESCCCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHhccc-----------------cC----CCHHHHH-hhcchHhhhhhccccCCCCCCCHHHHHHH
Confidence 99 4666666653100 00 0001111 000 111222345567889999999
Q ss_pred hC--HHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-----CcccCCCCChHHHHHHHcCCHHHH
Q 002124 558 KL--YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVS-----INFRDLSGWTALHWAAYCGREKTV 630 (964)
Q Consensus 558 ~~--~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gad-----vn~~D~~G~TPLH~Aa~~G~~eiV 630 (964)
.+ +..++++|++.|++++.+|..|+||||+||..|+.++|++|+++|++ +|.+|..|+||||+|+..|+.++|
T Consensus 148 ~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v 227 (364)
T 3ljn_A 148 LGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVA 227 (364)
T ss_dssp SCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHH
T ss_pred cCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHH
Confidence 99 89999999999999999999999999999999999999999999998 999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-------ccCCccCCCCCCcHHHHhh----
Q 002124 631 AVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSL-------LLSLKMNDSADDGALEDSI---- 699 (964)
Q Consensus 631 ~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~-------ladvn~~d~~G~tpl~~a~---- 699 (964)
++|+++|++++. +|..|+||||+|+..|+.+++++|+++|.... .......+..+++|++.+.
T Consensus 228 ~~Ll~~gad~~~------~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 301 (364)
T 3ljn_A 228 MRFVEMGIDVNM------EDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPS 301 (364)
T ss_dssp HHHHTTTCCTTC------CCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHH
T ss_pred HHHHHcCCCCCC------CCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccC
Confidence 999999999987 45799999999999999999999999983221 1112224556777776553
Q ss_pred HhHHHHHHHcc
Q 002124 700 AKAVQTVSEKT 710 (964)
Q Consensus 700 ~~iv~~Lle~g 710 (964)
...+..|+..+
T Consensus 302 ~~~v~~ll~~~ 312 (364)
T 3ljn_A 302 KQEVLQLLQEK 312 (364)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444555444
No 13
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.5e-29 Score=274.39 Aligned_cols=210 Identities=19% Similarity=0.085 Sum_probs=155.7
Q ss_pred cccccchhhhcCChHHHHHHHHcCCCC------CCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCC
Q 002124 408 EVAKCKWSCMFAEVEVPAEVLADGVLC------CRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGS 481 (964)
Q Consensus 408 ~~~~~~~Ac~fG~veVv~~LL~~Gvlr------C~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~ 481 (964)
..+.+++||..|++++++.||+.|... .....+..|.||||.|+..+.. ..++. ++...|+++|..|.+|
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~-~~~v~--~Ll~~Gadvn~~d~~G- 86 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPA-QKRLA--KVPASGLGVNVTSQDG- 86 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC-------------------------------------------CCCCTTCCCTTS-
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCH-HHHHH--HHHHCCCCCCCcCCCC-
Confidence 456789999999999999999988652 2344567789999998876551 23444 5667788888887776
Q ss_pred CccHHHHHHHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHH
Q 002124 482 STSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYS 561 (964)
Q Consensus 482 ~~t~Lhla~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~ 561 (964)
+||||+|+. .+..
T Consensus 87 -~TpLh~A~~------------------------------------------------------------------~g~~ 99 (269)
T 4b93_B 87 -SSPLHVAAL------------------------------------------------------------------HGRA 99 (269)
T ss_dssp -CCHHHHHHH------------------------------------------------------------------TTCT
T ss_pred -CCHHHHHHH------------------------------------------------------------------cCcH
Confidence 777766543 1222
Q ss_pred HHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC
Q 002124 562 WLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPG 641 (964)
Q Consensus 562 ~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn 641 (964)
.++++|++.|++++.++..|.||||+|+..++.+++++|++.|+++|.+|..|+||||+||..|+.++|++|+++|+++|
T Consensus 100 ~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn 179 (269)
T 4b93_B 100 DLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASIN 179 (269)
T ss_dssp THHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT
T ss_pred HHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 45778888999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh
Q 002124 642 LLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI 699 (964)
Q Consensus 642 ~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~ 699 (964)
. +|..|+||||+|+..|+.+++++|+++| ++++++|..|+||+++|.
T Consensus 180 ~------~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G-----ad~~~~d~~G~TpL~~A~ 226 (269)
T 4b93_B 180 A------SNNKGNTALHEAVIEKHVFVVELLLLHG-----ASVQVLNKRQRTAVDCAE 226 (269)
T ss_dssp C------BCTTSCBHHHHHHHTTCHHHHHHHHHTT-----CCSCCCCTTSCCSGGGSC
T ss_pred c------cccCCCcHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHHHH
Confidence 7 4569999999999999999999999999 899999999999999985
No 14
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=7.4e-29 Score=280.40 Aligned_cols=266 Identities=14% Similarity=0.090 Sum_probs=194.4
Q ss_pred hhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHHH----
Q 002124 415 SCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHL---- 490 (964)
Q Consensus 415 Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla~---- 490 (964)
+...|+.+++..++.. .++..|.||||+|+.++. ++++ ++.. .+++..|... +.||||+|+
T Consensus 73 ~~~~g~~~~~~~~~~~-------~~~~~g~t~L~~Aa~~~~---~~~~--~L~~--~~~n~~d~~~-g~t~Lh~Aa~~g~ 137 (373)
T 2fo1_E 73 NDFLGDFNHTNLQIPT-------EPEPESPIKLHTEAAGSY---AITE--PITR--ESVNIIDPRH-NRTVLHWIASNSS 137 (373)
T ss_dssp ----------------------------CCCHHHHHHHSSS---CCCS--CCST--TTTTTCCCSS-CCCHHHHHHCTTC
T ss_pred CCcccccccccccccc-------CCCCCCccHHHHHhcCCc---hHHH--Hhcc--ccccccCCcC-CCCHHHHHHHCCC
Confidence 4455777777666533 346678888888887654 3444 2322 4667666322 488888883
Q ss_pred ---------HHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHH
Q 002124 491 ---------RLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYS 561 (964)
Q Consensus 491 ---------rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~ 561 (964)
..++.|+..+++.+..+..|.+++|+|+..++. +.++.|+ .. +.+++..+..+.++++.+...+..
T Consensus 138 ~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~--~iv~~Ll-~~--ga~~~~~~~~g~t~L~~A~~~g~~ 212 (373)
T 2fo1_E 138 AEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRR--RLVAYLM-KA--GADPTIYNKSERSALHQAAANRDF 212 (373)
T ss_dssp CSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCH--HHHHHHH-HT--TCCSCCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChH--HHHHHHH-HC--CCCCcccCCCCCCHHHHHHHCCCH
Confidence 223444577778888888888888888776665 7777777 32 444555566777888888888888
Q ss_pred HHHHHHHHCC---CCCCccCCCCCcHHHHHHHcC---CHHHHHHHHhCCCCCcc--------cCCCCChHHHHHHHcCCH
Q 002124 562 WLLRKVCEDG---KGPCILDDEGQGVLHLAASLG---YDWAIKPTVTAGVSINF--------RDLSGWTALHWAAYCGRE 627 (964)
Q Consensus 562 ~lvk~Ll~~g---ad~n~~D~~G~TpLHlAa~~G---~~~iVk~LL~~Gadvn~--------~D~~G~TPLH~Aa~~G~~ 627 (964)
.++++|++.+ ++++..|..|.||||+||..| +.+++++|+++|++++. +|..|+||||+|+..|+.
T Consensus 213 ~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 292 (373)
T 2fo1_E 213 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNM 292 (373)
T ss_dssp HHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCH
T ss_pred HHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCH
Confidence 8999999888 789999999999999999988 88999999999999886 577899999999999999
Q ss_pred HHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhH
Q 002124 628 KTVAVLLSLG-AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKA 702 (964)
Q Consensus 628 eiV~~LL~~G-Advn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~i 702 (964)
++|++|+++| ++++. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .++
T Consensus 293 ~~v~~Ll~~~~~~~n~------~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-----ad~~~~d~~g~t~l~~A~~~g~~~i 361 (373)
T 2fo1_E 293 PIVKYLVGEKGSNKDK------QDEDGKTPIMLAAQEGRIEVVMYLIQQG-----ASVEAVDATDHTARQLAQANNHHNI 361 (373)
T ss_dssp HHHHHHHHHSCCCTTC------CCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCSSCCCSSSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHhcCCCccC------cCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccCCCCCCCCHHHHHHHcCCHHH
Confidence 9999999876 88877 4578999999999999999999999998 889999999999999884 688
Q ss_pred HHHHHHccC
Q 002124 703 VQTVSEKTA 711 (964)
Q Consensus 703 v~~Lle~ga 711 (964)
+++|+++++
T Consensus 362 v~~Ll~~~a 370 (373)
T 2fo1_E 362 VDIFDRCRP 370 (373)
T ss_dssp HHHHHTTC-
T ss_pred HHHHHhcCc
Confidence 999988875
No 15
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=3.2e-28 Score=267.85 Aligned_cols=247 Identities=16% Similarity=0.119 Sum_probs=205.7
Q ss_pred ccccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHH
Q 002124 409 VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL 488 (964)
Q Consensus 409 ~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhl 488 (964)
.+.+|+||..|+.++++.|++.|++ .+..+..|+||||+||..|+ .++++ ++...+++++..+..| .||||+
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~--~~iv~--~Ll~~g~~~~~~~~~g--~t~L~~ 130 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLLQHGAD--VHAKDKGGLVPLHNACSYGH--YEVTE--LLLKHGACVNAMDLWQ--FTPLHE 130 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC--CCccCCCCCcHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHH
Confidence 3578999999999999999999998 77788999999999999999 88888 6667789999888776 999999
Q ss_pred H-----HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhh-------------------hhhhHHHHhhhcCCCCCCccc
Q 002124 489 H-----LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQL-------------------KEEEESYQMVEANPEKNLSQH 544 (964)
Q Consensus 489 a-----~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~l-------------------l~~~~~~Ll~~~~~~~~is~~ 544 (964)
| ..++++|+..+++.+..+..+.++++++...... ....+..++ . ........
T Consensus 131 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~--~~~~~~~~ 207 (351)
T 3utm_A 131 AASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTL-A--LEIINFKQ 207 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHT-T--TCCTTCCC
T ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHH-H--hhcccccC
Confidence 9 5889999999988888899999888765321111 012222222 1 11111122
Q ss_pred cccchHHHHHHHHh---CHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHH
Q 002124 545 VEKYQILQKIMKEK---LYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWA 621 (964)
Q Consensus 545 ~~~~~~ll~~a~~~---~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~A 621 (964)
+..+.++++.+... +...++++|++.|++++.+|..|+||||+||..|+.+++++|+++|+++|.+|..|+||||+|
T Consensus 208 ~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A 287 (351)
T 3utm_A 208 PQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRA 287 (351)
T ss_dssp TTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 34556777887777 667899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 622 AYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 622 a~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
+..|+.++|++|+++|++++. +|..|+||+|+| +.+++++|.+.+
T Consensus 288 ~~~~~~~~v~~Ll~~gad~~~------~~~~g~tal~~a----~~~~~~~l~~~~ 332 (351)
T 3utm_A 288 ALAGHLQTCRLLLSYGSDPSI------ISLQGFTAAQMG----NEAVQQILSEST 332 (351)
T ss_dssp HHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHS----CHHHHHHHHHC-
T ss_pred HHcCcHHHHHHHHHcCCCCCC------cCCCCCChhhhh----hHHHHHHHHhcc
Confidence 999999999999999999888 557999999998 678999999876
No 16
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=2e-29 Score=284.96 Aligned_cols=251 Identities=16% Similarity=0.079 Sum_probs=212.4
Q ss_pred ccccchhhhcCChHHHHHHHHcCCCCCCCCCC-CCCCcceeecccCCcccchhhhhhh------hccCCCCCcccCCCCC
Q 002124 409 VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPH-AVGRVPFYITCSNRLACSEVREFDY------IVGSVKDADISDIYGS 481 (964)
Q Consensus 409 ~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~-~~G~TPLhvA~~ng~~~seVv~fey------l~~~~a~vn~~d~~g~ 481 (964)
.+.+|+||..| .++++.|+..++ +..+ ..|+||||+||.+|+ .+++++++ +...++++|..|.+|
T Consensus 95 ~t~L~~Aa~~~-~~~~~~L~~~~~----n~~d~~~g~t~Lh~Aa~~g~--~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g- 166 (373)
T 2fo1_E 95 PIKLHTEAAGS-YAITEPITRESV----NIIDPRHNRTVLHWIASNSS--AEKSEDLIVHEAKECIAAGADVNAMDCDE- 166 (373)
T ss_dssp CCHHHHHHHSS-SCCCSCCSTTTT----TTCCCSSCCCHHHHHHCTTC--CSCCTTHHHHHHHHHHHTCCCTTCCCTTS-
T ss_pred ccHHHHHhcCC-chHHHHhccccc----cccCCcCCCCHHHHHHHCCC--HHHHHHHHHHHHHHHHhcCCCCcCCCCCC-
Confidence 46789999954 578877765443 3344 689999999999998 77777543 236789999998887
Q ss_pred CccHHHHH-----HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHH
Q 002124 482 STSESFLH-----LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMK 556 (964)
Q Consensus 482 ~~t~Lhla-----~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~ 556 (964)
.||||+| ..++++|+..+++.+..+..|.+++++++..+.. +.+..|+.......+++..+..+.++++.+.
T Consensus 167 -~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 167 -NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF--GMMVYMLNSTKLKGDIEELDRNGMTALMIVA 243 (373)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCH--HHHHHHTTSHHHHHTTSCCCTTSCCHHHHHH
T ss_pred -CCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCH--HHHHHHHhcCccccChhhcCCCCCCHHHHHH
Confidence 9999999 5789999999999999999999999999777665 7777777222111345555667788888888
Q ss_pred HhC---HHHHHHHHHHCCCCCCc--------cCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCcccCCCCChHHHHHHHc
Q 002124 557 EKL---YSWLLRKVCEDGKGPCI--------LDDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYC 624 (964)
Q Consensus 557 ~~~---~~~lvk~Ll~~gad~n~--------~D~~G~TpLHlAa~~G~~~iVk~LL~~G-advn~~D~~G~TPLH~Aa~~ 624 (964)
..+ ...++++|++.|++++. .|..|.||||+||..|+.++|++|++.| +++|.+|..|+||||+|+..
T Consensus 244 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 323 (373)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHH
T ss_pred HhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHc
Confidence 776 88999999999999986 5779999999999999999999999875 99999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 625 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 625 G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
|+.++|++|+++|++++. +|..|.||||+|+.+|+.+++++|++++
T Consensus 324 g~~~iv~~Ll~~gad~~~------~d~~g~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 324 GRIEVVMYLIQQGASVEA------VDATDHTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp TCHHHHHHHHHTTCCSSC------CCSSSCCHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCccC------CCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 999999999999999988 4579999999999999999999999988
No 17
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=1.4e-28 Score=255.73 Aligned_cols=215 Identities=18% Similarity=0.193 Sum_probs=179.0
Q ss_pred cccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcc---cCCCCCCccHH
Q 002124 410 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADI---SDIYGSSTSES 486 (964)
Q Consensus 410 ~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~---~d~~g~~~t~L 486 (964)
+.+|+||..|+.++++.|++.|.. .....+..|+||||+||..|+ .++++ ++...+++++. .+..| .|||
T Consensus 4 t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~g~t~L~~A~~~~~--~~~v~--~Ll~~~~~~~~~~~~~~~g--~t~L 76 (228)
T 2dzn_A 4 YPLHQACMENEFFKVQELLHSKPS-LLLQKDQDGRIPLHWSVSFQA--HEITS--FLLSKMENVNLDDYPDDSG--WTPF 76 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGG-GTTCCCTTSCCHHHHHHHTTC--HHHHH--HHHHTCTTCCGGGCCCTTS--CCHH
T ss_pred cHHHHHHHhCCHHHHHHHHhcCcc-ccccCCCCCCCHHHHHHHcCC--HHHHH--HHHhccccccccccCCCCC--CCHH
Confidence 467999999999999999999876 223368889999999999988 78777 44555533333 23332 5555
Q ss_pred HHHHHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHH
Q 002124 487 FLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK 566 (964)
Q Consensus 487 hla~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~ 566 (964)
|+|+ ..+...+++.
T Consensus 77 ~~A~------------------------------------------------------------------~~~~~~~~~~ 90 (228)
T 2dzn_A 77 HIAC------------------------------------------------------------------SVGNLEVVKS 90 (228)
T ss_dssp HHHH------------------------------------------------------------------HHCCHHHHHH
T ss_pred HHHH------------------------------------------------------------------HcCCHHHHHH
Confidence 5443 2333456777
Q ss_pred HHHCC--CCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCC
Q 002124 567 VCEDG--KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG-AAPGLL 643 (964)
Q Consensus 567 Ll~~g--ad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~G-Advn~~ 643 (964)
|++.| ++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| ++++.
T Consensus 91 Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~- 169 (228)
T 2dzn_A 91 LYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW- 169 (228)
T ss_dssp HHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCC-
T ss_pred HHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccC-
Confidence 88887 888999999999999999999999999999999999999999999999999999999999999999 88877
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCcccCCccCCCCCCcHHHHhhH-hHHHHHHH
Q 002124 644 TDPSPEFPLSRTPSDLASSNGHKGISGFLA-ESSLTSLLLSLKMNDSADDGALEDSIA-KAVQTVSE 708 (964)
Q Consensus 644 ~d~~~~D~~G~TPLhlAa~~G~~eiv~~LL-e~G~~~~ladvn~~d~~G~tpl~~a~~-~iv~~Lle 708 (964)
+|..|+||||+|+..|+.+++++|+ ++| ++++.+|..|.||+++|.. .+++.|++
T Consensus 170 -----~d~~g~t~L~~A~~~~~~~~v~~Ll~~~g-----a~~~~~~~~g~t~l~~A~~~~~~~~l~~ 226 (228)
T 2dzn_A 170 -----QDKQGWTPLFHALAEGHGDAAVLLVEKYG-----AEYDLVDNKGAKAEDVALNEQVKKFFLN 226 (228)
T ss_dssp -----CCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----CCSCCBCTTSCBGGGGCSSTTHHHHHHT
T ss_pred -----cCCCCCCHHHHHHHcCCHHHHHHHHHhcC-----CCCCccCCCCCcHHHHHHHHHHHHHHHh
Confidence 5579999999999999999999999 889 8999999999999999964 55666654
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=1.6e-28 Score=261.57 Aligned_cols=212 Identities=17% Similarity=0.158 Sum_probs=143.3
Q ss_pred ChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHHHHHHHHHhhC
Q 002124 420 EVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMR 499 (964)
Q Consensus 420 ~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla~rlvkLLl~~ 499 (964)
+.++++.|+..|+. .....+..|+||||+||..|+ .++++ +++..+++++..|..| .||||+|+
T Consensus 35 ~~~~v~~Ll~~g~~-~~~~~d~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A~--------- 98 (253)
T 1yyh_A 35 APAVISDFIYQGAS-LHNQTDRTGETALHLAARYSR--SDAAK--RLLEASADANIQDNMG--RTPLHAAV--------- 98 (253)
T ss_dssp ------------------CCCTTSCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTS--CCHHHHHH---------
T ss_pred ChHHHHHHHHccCC-cccccCCCCCcHHHHHHHcCC--HHHHH--HHHHcCCCCCCCCCCC--CCHHHHHH---------
Confidence 55666666666655 112235556666666666555 55555 3344455555555444 55555553
Q ss_pred CCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCC
Q 002124 500 SSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDD 579 (964)
Q Consensus 500 ~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~ 579 (964)
..+.. +.++.|+... ..+++..+..+.++++.+...+...++++|++.|++++.+|.
T Consensus 99 -------------------~~~~~--~~v~~Ll~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~ 155 (253)
T 1yyh_A 99 -------------------SADAQ--GVFQILIRNR--ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD 155 (253)
T ss_dssp -------------------HHTCH--HHHHHHHHST--TSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCT
T ss_pred -------------------HcCCH--HHHHHHHHcC--CCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCC
Confidence 22222 4444454111 113333345566677777777777888999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH
Q 002124 580 EGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDL 659 (964)
Q Consensus 580 ~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhl 659 (964)
.|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+
T Consensus 156 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~ 229 (253)
T 1yyh_A 156 LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI------TDHMDRLPRDI 229 (253)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTCCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc------cccCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999877 45799999999
Q ss_pred HHHcCCHHHHHHHHHcC
Q 002124 660 ASSNGHKGISGFLAESS 676 (964)
Q Consensus 660 Aa~~G~~eiv~~LLe~G 676 (964)
|+.+|+.+|+++|....
T Consensus 230 A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 230 AQERMHHDIVRLLDLEH 246 (253)
T ss_dssp HHHTTCHHHHHHHHC--
T ss_pred HHHcCCHHHHHHHHHHh
Confidence 99999999999998754
No 19
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=7.8e-29 Score=259.37 Aligned_cols=146 Identities=18% Similarity=0.157 Sum_probs=118.0
Q ss_pred HHHhCHHHHHHHHHHCCC----CCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccC-CCCChHHHHHHHcCCHHH
Q 002124 555 MKEKLYSWLLRKVCEDGK----GPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKT 629 (964)
Q Consensus 555 a~~~~~~~lvk~Ll~~ga----d~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D-~~G~TPLH~Aa~~G~~ei 629 (964)
+...+...+++.|++.+. +++..|..|.||||+|+..|+.+++++|++.|++++.++ ..|+||||+|+..|+.++
T Consensus 86 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (241)
T 1k1a_A 86 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSM 165 (241)
T ss_dssp HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHH
Confidence 333344455666666665 788888899999999999999999999999999999888 789999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHH
Q 002124 630 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQT 705 (964)
Q Consensus 630 V~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~ 705 (964)
+++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .++++.
T Consensus 166 v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~A~~~~~~~i~~~ 234 (241)
T 1k1a_A 166 VQLLLQHGANVNA------QMYSGSSALHSASGRGLLPLVRTLVRSG-----ADSSLKNCHNDTPLMVARSRRVIDILRG 234 (241)
T ss_dssp HHHHHHTTCCTTC------BCTTSCBHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCTTTTCSSHHHHHHHTC
T ss_pred HHHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHhcC-----CCCCCcCCCCCCHHHHHHhcCcHHHHhh
Confidence 9999999999877 4568999999999999999999999998 888899999999999885 455655
Q ss_pred HHHccC
Q 002124 706 VSEKTA 711 (964)
Q Consensus 706 Lle~ga 711 (964)
|+++++
T Consensus 235 l~~~~a 240 (241)
T 1k1a_A 235 KATRPA 240 (241)
T ss_dssp ------
T ss_pred hccCCC
Confidence 555543
No 20
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=7.7e-28 Score=251.87 Aligned_cols=205 Identities=16% Similarity=0.157 Sum_probs=160.5
Q ss_pred cccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHH
Q 002124 410 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH 489 (964)
Q Consensus 410 ~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla 489 (964)
+.+|+||..|+.++++.|++.|+. ....+..|+||||+||..|+ .++++ ++...+++++..+..| .||||
T Consensus 13 t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~-- 82 (237)
T 3b7b_A 13 SPLHAAAEAGHVDICHMLVQAGAN--IDTCSEDQRTPLMEAAENNH--LEAVK--YLIKAGALVDPKDAEG--STCLH-- 82 (237)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTC--HHHHH--HHHTTTCCCCCCCTTS--CCHHH--
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCC--cCccCCCCCCHHHHHHHhCC--HHHHH--HHHhCCCCCCCCCCCC--CcHHH--
Confidence 455666666666666666666655 44455556666666666655 55554 3444445555444433 44443
Q ss_pred HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHH
Q 002124 490 LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE 569 (964)
Q Consensus 490 ~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~ 569 (964)
.+...+...++++|++
T Consensus 83 ----------------------------------------------------------------~A~~~~~~~~~~~Ll~ 98 (237)
T 3b7b_A 83 ----------------------------------------------------------------LAAKKGHYEVVQYLLS 98 (237)
T ss_dssp ----------------------------------------------------------------HHHHTTCHHHHHHHHT
T ss_pred ----------------------------------------------------------------HHHHcCCHHHHHHHHh
Confidence 3334444567788888
Q ss_pred CC-CCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 002124 570 DG-KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSP 648 (964)
Q Consensus 570 ~g-ad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~ 648 (964)
.| .+++..|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 99 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------ 172 (237)
T 3b7b_A 99 NGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHA------ 172 (237)
T ss_dssp TTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTC------
T ss_pred CCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------
Confidence 87 88999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh
Q 002124 649 EFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI 699 (964)
Q Consensus 649 ~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~ 699 (964)
+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|.
T Consensus 173 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~t~l~~A~ 218 (237)
T 3b7b_A 173 VNIHGDSPLHIAARENRYDCVVLFLSRD-----SDVTLKNKEGETPLQCAS 218 (237)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHTTT-----CCTTCCCTTSCCHHHHSC
T ss_pred cCCCCCCHHHHHHHhCCHhHHHHHHHcC-----CCCCccCCCCCCHHHHHH
Confidence 4579999999999999999999999999 899999999999999984
No 21
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=9.1e-29 Score=258.84 Aligned_cols=225 Identities=16% Similarity=0.060 Sum_probs=181.7
Q ss_pred cccccchhhhcCChHHHHHHHH----cCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCc
Q 002124 408 EVAKCKWSCMFAEVEVPAEVLA----DGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSST 483 (964)
Q Consensus 408 ~~~~~~~Ac~fG~veVv~~LL~----~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~ 483 (964)
..+.+|+||..|++++++.|++ .|.. .+..+..|+||||+||..|+ .++++ ++...+++++..+..| .
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~~~~~g~t~L~~A~~~~~--~~~v~--~Ll~~g~~~~~~~~~g--~ 80 (241)
T 1k1a_A 9 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRE--LDIYNNLRQTPLHLAVITTL--PSVVR--LLVTAGASPMALDRHG--Q 80 (241)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHTTCC--SCCCCTTSCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTS--C
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHHhcCCC--CCcccccCCCHHHHHHHcCC--HHHHH--HHHHcCCCccccCCCC--C
Confidence 3467889999999999988886 6766 66678889999999998888 77777 5566778888777765 8
Q ss_pred cHHHHHHHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcC-CCCCCccccccchHHHHHHHHhCHHH
Q 002124 484 SESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEAN-PEKNLSQHVEKYQILQKIMKEKLYSW 562 (964)
Q Consensus 484 t~Lhla~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~-~~~~is~~~~~~~~ll~~a~~~~~~~ 562 (964)
||||+|+.... .+.+..++.... ...+++..+..+.++++.+...+...
T Consensus 81 t~l~~A~~~~~------------------------------~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 130 (241)
T 1k1a_A 81 TAAHLACEHRS------------------------------PTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE 130 (241)
T ss_dssp CHHHHHHHTTC------------------------------HHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred CHHHHHHHcCC------------------------------HHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHH
Confidence 88888754211 133344441211 12234444556778888888888899
Q ss_pred HHHHHHHCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC
Q 002124 563 LLRKVCEDGKGPCILD-DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPG 641 (964)
Q Consensus 563 lvk~Ll~~gad~n~~D-~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn 641 (964)
++++|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 131 ~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 210 (241)
T 1k1a_A 131 TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS 210 (241)
T ss_dssp HHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 9999999999999998 889999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 642 LLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 642 ~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
. +|..|.||||+|+..|+.++++.|++++
T Consensus 211 ~------~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 211 L------KNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp C------CCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred C------cCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 7 5579999999999999999999999876
No 22
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=1.1e-28 Score=276.31 Aligned_cols=231 Identities=16% Similarity=0.118 Sum_probs=185.3
Q ss_pred CCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHHHHHHHHHhhCCCCCCCCccccccHHH
Q 002124 436 RIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQK 515 (964)
Q Consensus 436 ~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla~rlvkLLl~~~~~~~~~~~~g~~~l~ 515 (964)
....+..|+||||+||..|+ .++++ +++..+++++..|..| .||||+|+...++
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~--~~~v~--~Ll~~g~~~~~~d~~g--~t~L~~A~~~g~~-------------------- 66 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQ--TDEVR--RLIETGVSPTIQNRFG--CTALHLACKFGCV-------------------- 66 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHHHHHHCCH--------------------
T ss_pred ccccCCCCCCHHHHHHHcCC--HHHHH--HHHHcCCCccccCCCC--CcHHHHHHHcCCH--------------------
Confidence 34457889999999999999 78888 5566788888888776 8999888542211
Q ss_pred HHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHC----CCCCCc---------------
Q 002124 516 LISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCED----GKGPCI--------------- 576 (964)
Q Consensus 516 la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~----gad~n~--------------- 576 (964)
+.++.|+ .... +. ....+.++++.+...++..++++|++. |++++.
T Consensus 67 ----------~~v~~Ll-~~g~--~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (364)
T 3ljn_A 67 ----------DTAKYLA-SVGE--VH--SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGS 131 (364)
T ss_dssp ----------HHHHHHH-HHCC--CC--CCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETT
T ss_pred ----------HHHHHHH-HCCC--Cc--cccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhcc
Confidence 3344444 2111 11 112455677777777777788888877 777766
Q ss_pred --cCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 002124 577 --LDDEGQGVLHLAASLG--YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPL 652 (964)
Q Consensus 577 --~D~~G~TpLHlAa~~G--~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~ 652 (964)
.|..|.||||+||..| +.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++....+ ++.+|..
T Consensus 132 ~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~~~~~~ 210 (364)
T 3ljn_A 132 HVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLR-LDYANKQ 210 (364)
T ss_dssp EEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCC-TTCCCTT
T ss_pred ccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc-ccccCCC
Confidence 8889999999999999 9999999999999999999999999999999999999999999999922111 2236679
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCC
Q 002124 653 SRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATP 713 (964)
Q Consensus 653 G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~ 713 (964)
|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .+++++|+++++..
T Consensus 211 g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 211 GNSHLHWAILINWEDVAMRFVEMG-----IDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CCCTTHHHHTTTCHHHHHHHHTTT-----CCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 999999999999999999999999 899999999999999985 69999999998653
No 23
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=1.1e-27 Score=250.61 Aligned_cols=187 Identities=20% Similarity=0.137 Sum_probs=160.4
Q ss_pred cccccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCC-CCCcccCCCCCCccHH
Q 002124 408 EVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSV-KDADISDIYGSSTSES 486 (964)
Q Consensus 408 ~~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~-a~vn~~d~~g~~~t~L 486 (964)
..+.+++||..|+.++++.|++.|+. ....+..|.||||+||..|+ .++++ ++...+ .+++..+..| .|||
T Consensus 44 g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~--~~~~~--~Ll~~~~~~~~~~~~~g--~t~L 115 (237)
T 3b7b_A 44 QRTPLMEAAENNHLEAVKYLIKAGAL--VDPKDAEGSTCLHLAAKKGH--YEVVQ--YLLSNGQMDVNCQDDGG--WTPM 115 (237)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCC--CCCCCTTSCCHHHHHHHTTC--HHHHH--HHHTTTCCCTTCCCTTS--CCHH
T ss_pred CCCHHHHHHHhCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCC--HHHHH--HHHhCCCCCcccCCCCC--CCHH
Confidence 44678999999999999999999988 77788999999999999998 78777 555555 5566655554 5666
Q ss_pred HHHHHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHH
Q 002124 487 FLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK 566 (964)
Q Consensus 487 hla~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~ 566 (964)
|+|++ .+...++++
T Consensus 116 ~~A~~------------------------------------------------------------------~~~~~~~~~ 129 (237)
T 3b7b_A 116 IWATE------------------------------------------------------------------YKHVDLVKL 129 (237)
T ss_dssp HHHHH------------------------------------------------------------------TTCHHHHHH
T ss_pred HHHHH------------------------------------------------------------------cCCHHHHHH
Confidence 54432 223457788
Q ss_pred HHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 002124 567 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP 646 (964)
Q Consensus 567 Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~ 646 (964)
|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 130 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~---- 205 (237)
T 3b7b_A 130 LLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTL---- 205 (237)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC----
T ss_pred HHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 002124 647 SPEFPLSRTPSDLASSNGHKGISGFLAE 674 (964)
Q Consensus 647 ~~~D~~G~TPLhlAa~~G~~eiv~~LLe 674 (964)
+|..|.||||+|+.+|+...+..|++
T Consensus 206 --~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 206 --KNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp --CCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred --cCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 55799999999999999876665554
No 24
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=1.9e-27 Score=253.28 Aligned_cols=227 Identities=17% Similarity=0.121 Sum_probs=158.3
Q ss_pred CCCCCCCCCcceeecccCCcc-----------cchhhhhhhhccCCCCCccc-CCCCCCccHHHHHHHHHHHHhhCCCCC
Q 002124 436 RIPPHAVGRVPFYITCSNRLA-----------CSEVREFDYIVGSVKDADIS-DIYGSSTSESFLHLRLERILSMRSSPQ 503 (964)
Q Consensus 436 ~~p~~~~G~TPLhvA~~ng~~-----------~seVv~feyl~~~~a~vn~~-d~~g~~~t~Lhla~rlvkLLl~~~~~~ 503 (964)
++..+..|+||||+||..|.. ..++++ ++...+++++.. |..| .||||+|
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~--~Ll~~g~~~~~~~d~~g--~t~L~~A-------------- 64 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVIS--DFIYQGASLHNQTDRTG--ETALHLA-------------- 64 (253)
T ss_dssp ---------------------------------------------------CCCTTS--CCHHHHH--------------
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHH--HHHHccCCcccccCCCC--CcHHHHH--------------
Confidence 456788999999999987731 133333 334444444322 3332 5555554
Q ss_pred CCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCC-CCCccCCCCC
Q 002124 504 NHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGK-GPCILDDEGQ 582 (964)
Q Consensus 504 ~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~ga-d~n~~D~~G~ 582 (964)
+..+.. +.++.|+ .. +.+++..+..+.++++.+...+...++++|++.|. +++.+|..|.
T Consensus 65 --------------~~~g~~--~~v~~Ll-~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~ 125 (253)
T 1yyh_A 65 --------------ARYSRS--DAAKRLL-EA--SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGT 125 (253)
T ss_dssp --------------HHTTCH--HHHHHHH-HT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCC
T ss_pred --------------HHcCCH--HHHHHHH-Hc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCC
Confidence 333332 5556666 22 34445555667888899999999999999999987 8999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 002124 583 GVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS 662 (964)
Q Consensus 583 TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~ 662 (964)
||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+.
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 126 TPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM------QNNREETPLFLAAR 199 (253)
T ss_dssp CHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHH
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 45799999999999
Q ss_pred cCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHcc
Q 002124 663 NGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKT 710 (964)
Q Consensus 663 ~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~g 710 (964)
.|+.+++++|+++| ++++.+|..|.||+++|. .+++++|....
T Consensus 200 ~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 200 EGSYETAKVLLDHF-----ANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp HTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred CCCHHHHHHHHHcC-----CCccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 99999999999999 899999999999999995 57787777654
No 25
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=2.9e-28 Score=264.02 Aligned_cols=214 Identities=18% Similarity=0.155 Sum_probs=179.9
Q ss_pred cccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHH
Q 002124 410 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH 489 (964)
Q Consensus 410 ~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla 489 (964)
+.+++||..|++++++.|++.|++ ++..+..|.||||+||..|+ .++++ +++..+++++..|..| +||||+|
T Consensus 42 t~l~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~ga~~~~~~~~g--~tpL~~A 113 (299)
T 1s70_B 42 AVFLAACSSGDTEEVLRLLERGAD--INYANVDGLTALHQACIDDN--VDMVK--FLVENGANINQPDNEG--WIPLHAA 113 (299)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHCCC--TTCBCTTCCBHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTS--CCHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCC--HHHHH--HHHHCCCCCCCCCCCC--CcHHHHH
Confidence 467999999999999999999988 66778899999999999999 88888 5566788888877766 7777765
Q ss_pred HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHH
Q 002124 490 LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE 569 (964)
Q Consensus 490 ~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~ 569 (964)
+. .++..++++|++
T Consensus 114 ~~------------------------------------------------------------------~g~~~~v~~Ll~ 127 (299)
T 1s70_B 114 AS------------------------------------------------------------------CGYLDIAEYLIS 127 (299)
T ss_dssp HH------------------------------------------------------------------HTCHHHHHHHHH
T ss_pred HH------------------------------------------------------------------cCCHHHHHHHHh
Confidence 43 122346777888
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCc--------------------------ccCCCCChHHHHHH
Q 002124 570 DGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT-AGVSIN--------------------------FRDLSGWTALHWAA 622 (964)
Q Consensus 570 ~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~-~Gadvn--------------------------~~D~~G~TPLH~Aa 622 (964)
+|++++..|..|.||||+|+..|+.++++.|+. .|++++ ..+..|.||||+|+
T Consensus 128 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~ 207 (299)
T 1s70_B 128 QGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAA 207 (299)
T ss_dssp TTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHH
T ss_pred CCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHH
Confidence 888888888889999999988888888876664 355443 35678999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhhHhH
Q 002124 623 YCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKA 702 (964)
Q Consensus 623 ~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~~~i 702 (964)
..|+.+++++|+++|++++. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|...+
T Consensus 208 ~~g~~~~v~~Ll~~g~d~~~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~t~l~~A~~~~ 276 (299)
T 1s70_B 208 AKGYTEVLKLLIQARYDVNI------KDYDGWTPLHAAAHWGKEEACRILVENL-----CDMEAVNKVGQTAFDVADEDI 276 (299)
T ss_dssp HHTCHHHHHHHHTTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCTTTSCCSGG
T ss_pred HCCcHHHHHHHHHcCCCCCC------cCCCCCcHHHHHHhcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHHH
Confidence 99999999999999999987 4579999999999999999999999999 899999999999999997655
Q ss_pred HHHHHH
Q 002124 703 VQTVSE 708 (964)
Q Consensus 703 v~~Lle 708 (964)
++.|.+
T Consensus 277 ~~~l~~ 282 (299)
T 1s70_B 277 LGYLEE 282 (299)
T ss_dssp GHHHHH
T ss_pred HHHHHH
Confidence 555544
No 26
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=9.3e-28 Score=248.93 Aligned_cols=213 Identities=18% Similarity=0.179 Sum_probs=131.7
Q ss_pred CChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHHHHHHHHHhh
Q 002124 419 AEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSM 498 (964)
Q Consensus 419 G~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla~rlvkLLl~ 498 (964)
|+.++++.|++.|.. .....+..|.||||+||..|+ .++++ ++...+++++..+..| .||||+|+...+
T Consensus 2 g~~~~i~~Ll~~g~~-~~~~~d~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~g--~t~L~~A~~~~~---- 70 (223)
T 2f8y_A 2 DAPAVISDFIYQGAS-LHNQTDRTGETALHLAARYSR--SDAAK--RLLEASADANIQDNMG--RTPLHAAVSADA---- 70 (223)
T ss_dssp ---CCEETTEETTCC-TTCCCTTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTS--CCHHHHHHHTTC----
T ss_pred CcHHHHHHHHHcCCC-cccccCCCCCchHHHHHHcCC--HHHHH--HHHHcCCCCCCcCCCC--CCHHHHHHHcCC----
Confidence 677888888888877 223347889999999998888 77777 5556677787777665 778877653111
Q ss_pred CCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccC
Q 002124 499 RSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILD 578 (964)
Q Consensus 499 ~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D 578 (964)
.+.++.++... ..+++..+..+.++++.+...+...++++|++.|++++.+|
T Consensus 71 --------------------------~~~v~~Ll~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 122 (223)
T 2f8y_A 71 --------------------------QGVFQILIRNR--ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVD 122 (223)
T ss_dssp --------------------------HHHHHHHHHBT--TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC
T ss_pred --------------------------HHHHHHHHHcC--CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcC
Confidence 12223333111 11122222334445555555555566666666666666666
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHH
Q 002124 579 DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSD 658 (964)
Q Consensus 579 ~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLh 658 (964)
..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||
T Consensus 123 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~ 196 (223)
T 2f8y_A 123 DLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI------TDHMDRLPRD 196 (223)
T ss_dssp TTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTCCCHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc------ccccCCCHHH
Confidence 6666666666666666666666666666666666666666666666666666666666666655 3346666666
Q ss_pred HHHHcCCHHHHHHHHHcC
Q 002124 659 LASSNGHKGISGFLAESS 676 (964)
Q Consensus 659 lAa~~G~~eiv~~LLe~G 676 (964)
+|+..|+.+++++|+++|
T Consensus 197 ~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 197 IAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp HHHHTTCHHHHHHHHHTT
T ss_pred HHHHhcchHHHHHHHHcC
Confidence 666666666666666666
No 27
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=1.2e-27 Score=260.52 Aligned_cols=218 Identities=10% Similarity=0.014 Sum_probs=182.9
Q ss_pred cccccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHH
Q 002124 408 EVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESF 487 (964)
Q Consensus 408 ~~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lh 487 (964)
..+.+|+||..|+.++++.|++.|+. .+..+..|+||||+||..|+ .++++ ++...+++++..|..| .||||
T Consensus 59 g~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~--~~~v~--~Ll~~ga~~~~~~~~g--~t~L~ 130 (285)
T 3d9h_A 59 DWSPMHEAAIHGHQLSLRNLISQGWA--VNIITADHVSPLHEACLGGH--LSCVK--ILLKHGAQVNGVTADW--HTPLF 130 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC--SCEECTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCSSCCCTTC--CCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHCCc--HHHHH--HHHHCCCCCCCCCCCC--CCHHH
Confidence 45788999999999999999999988 66678899999999999999 88888 5566788899888876 89999
Q ss_pred HHHHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHH
Q 002124 488 LHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKV 567 (964)
Q Consensus 488 la~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~L 567 (964)
+|+..... +.++.|+ ... .+++.. ..+.++++.+...+...++++|
T Consensus 131 ~A~~~~~~------------------------------~~v~~Ll-~~g--~~~~~~-~~g~t~L~~A~~~g~~~~v~~L 176 (285)
T 3d9h_A 131 NACVSGSW------------------------------DCVNLLL-QHG--ASVQPE-SDLASPIHEAARRGHVECVNSL 176 (285)
T ss_dssp HHHHHTCH------------------------------HHHHHHH-HTT--CCSSCS-CTTSCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcCHH------------------------------HHHHHHH-HCC--CCCCCC-CCCCCHHHHHHHcCCHHHHHHH
Confidence 88542211 3334444 211 112211 2356777888888888999999
Q ss_pred HHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 002124 568 CEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPS 647 (964)
Q Consensus 568 l~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~ 647 (964)
++.|++++.+|..|.||||+|+..|+.+++++|++.|++++. |..|+||||+|+..|+.+++++|+++|++++.
T Consensus 177 l~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~----- 250 (285)
T 3d9h_A 177 IAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQA----- 250 (285)
T ss_dssp HHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-----
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----
Confidence 999999999999999999999999999999999999999995 89999999999999999999999999999887
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHc-C
Q 002124 648 PEFPLSRTPSDLASSNGHKGISGFLAES-S 676 (964)
Q Consensus 648 ~~D~~G~TPLhlAa~~G~~eiv~~LLe~-G 676 (964)
+|..|+||||+|+ ++.+++++|+++ |
T Consensus 251 -~d~~g~t~l~~A~--~~~~~~~~Ll~~~~ 277 (285)
T 3d9h_A 251 -KNAEGKRPVELVP--PESPLAQLFLEREG 277 (285)
T ss_dssp -CCTTSCCGGGGSC--TTSHHHHHHHHHC-
T ss_pred -cCCCCCCHHHHhc--CccHHHHHHHHhhc
Confidence 5579999999999 457999999998 5
No 28
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=1e-26 Score=235.41 Aligned_cols=151 Identities=26% Similarity=0.299 Sum_probs=139.4
Q ss_pred HHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHH
Q 002124 552 QKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA 631 (964)
Q Consensus 552 l~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~ 631 (964)
+..|+..|...+|+.|++.|+++|.+|..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+||..|+.++|+
T Consensus 8 L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~ 87 (169)
T 4gpm_A 8 LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVK 87 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHH
Confidence 44566777889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHH
Q 002124 632 VLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVS 707 (964)
Q Consensus 632 ~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Ll 707 (964)
+|+++|+++|. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||+++|. .+++++|+
T Consensus 88 ~Ll~~gadvn~------~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 88 LLISKGADVNA------KDSDGRTPLHHAAENGHKEVVKLLISKG-----ADVNTSDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp HHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHCcCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999988 5579999999999999999999999999 899999999999999985 69999999
Q ss_pred HccCCC
Q 002124 708 EKTATP 713 (964)
Q Consensus 708 e~ga~~ 713 (964)
++||..
T Consensus 157 ~~GA~i 162 (169)
T 4gpm_A 157 KQGGWL 162 (169)
T ss_dssp TC----
T ss_pred HCCCCc
Confidence 999854
No 29
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.94 E-value=8.7e-27 Score=242.44 Aligned_cols=222 Identities=17% Similarity=0.194 Sum_probs=152.6
Q ss_pred ccccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHH
Q 002124 409 VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL 488 (964)
Q Consensus 409 ~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhl 488 (964)
.+.+++||..|+.++++.|++.|++ ....+..|.||||+||..|+ .++++ ++...+.+++..+... +.||||+
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~--~~~v~--~Ll~~~~~~~~~~~~~-~~t~L~~ 82 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYD--VRQPDKENVTLLHWAAINNR--IDLVK--YYISKGAIVDQLGGDL-NSTPLHW 82 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCBTTT-TBCHHHH
T ss_pred chHHHHHHHcCChHHHHHHHHcCCC--cCCCCCCCCCHHHHHHHhCC--HHHHH--HHHHcCCcchhhcCCc-CCChhHH
Confidence 3567899999999999999999987 66778889999999999888 77777 5555566555443332 3566655
Q ss_pred HHHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHH
Q 002124 489 HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVC 568 (964)
Q Consensus 489 a~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll 568 (964)
|+. .+...++++|+
T Consensus 83 A~~------------------------------------------------------------------~~~~~~v~~Ll 96 (240)
T 3eu9_A 83 ATR------------------------------------------------------------------QGHLSMVVQLM 96 (240)
T ss_dssp HHH------------------------------------------------------------------HTCHHHHHHHH
T ss_pred HHH------------------------------------------------------------------cCCHHHHHHHH
Confidence 432 22234556666
Q ss_pred HCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCC
Q 002124 569 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGR-EKTVAVLLSLGAAPGLLTDPS 647 (964)
Q Consensus 569 ~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~-~eiV~~LL~~GAdvn~~~d~~ 647 (964)
+.|++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++ .+++++|+..|++++..+.
T Consensus 97 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~-- 174 (240)
T 3eu9_A 97 KYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDK-- 174 (240)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCT--
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhc--
Confidence 6677777777777777777777777777777777777777777777777777775555 6677777777777665331
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCC
Q 002124 648 PEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATP 713 (964)
Q Consensus 648 ~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~ 713 (964)
..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .++++.|++.++..
T Consensus 175 ---~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 175 ---YHKNTALHWAVLAGNTTVISLLLEAG-----ANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp ---TTCCCHHHHHHHHTCHHHHHHHHHHT-----CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred ---cCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 26677777777777777777777776 666677777777777663 46777777766543
No 30
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.94 E-value=2.8e-26 Score=245.22 Aligned_cols=193 Identities=16% Similarity=0.133 Sum_probs=158.2
Q ss_pred hhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 002124 526 EEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGV 605 (964)
Q Consensus 526 ~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Ga 605 (964)
+.++.|+........++..+..+.+++++|+..+...++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 23 ~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 102 (282)
T 1oy3_D 23 PFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP 102 (282)
T ss_dssp HHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCC
T ss_pred HHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCC
Confidence 45555652222222244555677888999999999999999999999999999999999999999999999999999876
Q ss_pred C-----------------------------------------------CcccCCCCChHHHHHHHcCCHHHHHHHHHcCC
Q 002124 606 S-----------------------------------------------INFRDLSGWTALHWAAYCGREKTVAVLLSLGA 638 (964)
Q Consensus 606 d-----------------------------------------------vn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GA 638 (964)
+ ++.+|..|+||||+|+..|+.++|++|+++|+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 182 (282)
T 1oy3_D 103 SHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182 (282)
T ss_dssp SSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred CCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence 5 77889999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCCC
Q 002124 639 APGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPA 714 (964)
Q Consensus 639 dvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~ 714 (964)
+++..+. ..|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .+++++|+++|+++.
T Consensus 183 ~~~~~~~-----~~g~tpL~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 252 (282)
T 1oy3_D 183 DLNKPEP-----TCGRTPLHLAVEAQAASVLELLLKAG-----ADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252 (282)
T ss_dssp CTTCCCT-----TTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCC
T ss_pred CCCCCCC-----CCCcCHHHHHHHcCCHHHHHHHHHcC-----CCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcC
Confidence 9988542 35999999999999999999999999 899999999999999994 799999999999877
Q ss_pred CCCCccccccccccchhhhhhh
Q 002124 715 NDNDESDVLSLKDSLTAICNAT 736 (964)
Q Consensus 715 ~~~d~~~~l~Lkd~ltA~~~Aa 736 (964)
..+ ..+.+++..|.
T Consensus 253 ~~~--------~~g~tpl~~a~ 266 (282)
T 1oy3_D 253 EDG--------GDKLSPCSSSG 266 (282)
T ss_dssp CCC-------------------
T ss_pred cCC--------CcccccccccC
Confidence 533 44556665543
No 31
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=1.1e-26 Score=242.53 Aligned_cols=193 Identities=17% Similarity=0.112 Sum_probs=149.4
Q ss_pred cccchhhhcCChHHHHHHHHc-CCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCC-----cccCCCCCCc
Q 002124 410 AKCKWSCMFAEVEVPAEVLAD-GVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDA-----DISDIYGSST 483 (964)
Q Consensus 410 ~~~~~Ac~fG~veVv~~LL~~-GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~v-----n~~d~~g~~~ 483 (964)
+.+|+||..|+.++++.|++. |++ .+..+..|+||||+||..|+ .+++++ +...++++ +..|..| .
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~~g~~--~~~~~~~g~t~L~~A~~~g~--~~~v~~--Ll~~~~~~~~~~~~~~~~~g--~ 76 (232)
T 2rfa_A 5 SPLLLAAKENDVQALSKLLKFEGCE--VHQRGAMGETALHIAALYDN--LEAAMV--LMEAAPELVFEPMTSELYEG--Q 76 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCSC--TTCCCTTSCCHHHHHHHTTC--HHHHHH--HHHHCGGGGGCCCCSTTTTT--C
T ss_pred CHHHHHHHcCCHHHHHHHHHhcCCC--cccCCCCCCCHHHHHHHcCC--HHHHHH--HHHcCchhccccccccCCCC--c
Confidence 467888888888888888887 777 66678888888888888887 777773 33334433 2222232 5
Q ss_pred cHHHHHHHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHH
Q 002124 484 SESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL 563 (964)
Q Consensus 484 t~Lhla~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~l 563 (964)
||||+| ...+...+
T Consensus 77 t~L~~A------------------------------------------------------------------~~~~~~~~ 90 (232)
T 2rfa_A 77 TALHIA------------------------------------------------------------------VINQNVNL 90 (232)
T ss_dssp CHHHHH------------------------------------------------------------------HHTTCHHH
T ss_pred CHHHHH------------------------------------------------------------------HHcCCHHH
Confidence 555544 33333444
Q ss_pred HHHHHHCCCCCCcc-------------CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHH
Q 002124 564 LRKVCEDGKGPCIL-------------DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTV 630 (964)
Q Consensus 564 vk~Ll~~gad~n~~-------------D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV 630 (964)
+++|+++|++++.. |..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 91 v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~ 170 (232)
T 2rfa_A 91 VRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFA 170 (232)
T ss_dssp HHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHH
T ss_pred HHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHH
Confidence 55555555555544 44899999999999999999999999999999999999999999999999988
Q ss_pred ----HHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 631 ----AVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 631 ----~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
++|+++|++++.....+.+|..|+||||+|+..|+.+++++|+++|
T Consensus 171 ~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 171 CQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp HHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 9999999988532222346789999999999999999999999998
No 32
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.94 E-value=4.4e-26 Score=237.11 Aligned_cols=208 Identities=18% Similarity=0.089 Sum_probs=170.2
Q ss_pred CCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHHHHHHHHHhhCCCCCCCCccccccHHHHHH
Q 002124 439 PHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLIS 518 (964)
Q Consensus 439 ~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla~rlvkLLl~~~~~~~~~~~~g~~~l~la~ 518 (964)
.+..|.+|||.||..|. .++++ ++...+.+++..+..| .||||+|+
T Consensus 5 ~d~~~~~~l~~A~~~g~--~~~~~--~Ll~~g~~~~~~~~~g--~t~L~~A~---------------------------- 50 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGI--YERCR--ELVEAGYDVRQPDKEN--VTLLHWAA---------------------------- 50 (240)
T ss_dssp CSCGGGCCHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTS--CCHHHHHH----------------------------
T ss_pred cccccchHHHHHHHcCC--hHHHH--HHHHcCCCcCCCCCCC--CCHHHHHH----------------------------
Confidence 46677888888888777 66666 4555566666665554 55555433
Q ss_pred HHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccC-CCCCcHHHHHHHcCCHHHH
Q 002124 519 KIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILD-DEGQGVLHLAASLGYDWAI 597 (964)
Q Consensus 519 ~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D-~~G~TpLHlAa~~G~~~iV 597 (964)
..+...++++|++.|.+++..+ ..|.||||+|+..|+.+++
T Consensus 51 --------------------------------------~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v 92 (240)
T 3eu9_A 51 --------------------------------------INNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMV 92 (240)
T ss_dssp --------------------------------------HTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHH
T ss_pred --------------------------------------HhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHH
Confidence 3334467888888898888665 4599999999999999999
Q ss_pred HHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcC
Q 002124 598 KPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH-KGISGFLAESS 676 (964)
Q Consensus 598 k~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~-~eiv~~LLe~G 676 (964)
++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..++ .+++++|++.|
T Consensus 93 ~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~------~~~~g~t~l~~a~~~~~~~~~~~~L~~~~ 166 (240)
T 3eu9_A 93 VQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDM------MDQNGMTPLMWAAYRTHSVDPTRLLLTFN 166 (240)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHCCSSTTHHHHHHTT
T ss_pred HHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccc------cCCCCCcHHHHHHHhCChHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999887 45799999999997776 89999999999
Q ss_pred CCCcccCCccCCC-CCCcHHHHhh----HhHHHHHHHccCCCCCCCCccccccccccchhhhhhhh
Q 002124 677 LTSLLLSLKMNDS-ADDGALEDSI----AKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQ 737 (964)
Q Consensus 677 ~~~~ladvn~~d~-~G~tpl~~a~----~~iv~~Lle~ga~~~~~~d~~~~l~Lkd~ltA~~~Aaq 737 (964)
++++..+. .|.||++.|. .++++.|+++|+++... ...+.++++.|++
T Consensus 167 -----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--------~~~g~t~l~~A~~ 219 (240)
T 3eu9_A 167 -----VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQ--------NIKGESALDLAKQ 219 (240)
T ss_dssp -----CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCB--------CTTSCBHHHHHHH
T ss_pred -----CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCc--------CCCCCCHHHHHHH
Confidence 88888887 8999999984 69999999999876642 3456678887775
No 33
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=6.7e-27 Score=254.71 Aligned_cols=233 Identities=10% Similarity=-0.010 Sum_probs=181.7
Q ss_pred cCCh-HHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHHH-----H
Q 002124 418 FAEV-EVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHL-----R 491 (964)
Q Consensus 418 fG~v-eVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla~-----r 491 (964)
..+. +|.+.|...+ .+..+..|+||||+||..|+ .++++ ++...+++++.. +| .||||+|+ .
T Consensus 9 ~~~~~~v~~lL~~~~----~~~~d~~g~t~L~~A~~~g~--~~~v~--~Ll~~g~~~~~~--~g--~t~L~~A~~~g~~~ 76 (285)
T 3kea_A 9 TWKSKQLKSFLSSKD----TFKADVHGHSASYYAIADNN--VRLVC--TLLNAGALKNLL--EN--EFPLHQAATLEDTK 76 (285)
T ss_dssp GCCHHHHHHHHHSTT----TTCCCTTSCCHHHHHHHTTC--HHHHH--HHHHTTGGGSCC--TT--CCHHHHHTTSSSCH
T ss_pred hcCHHHHHHHHHhCC----CCccCCCCCCHHHHHHHcCC--HHHHH--HHHhCCCCCCCC--CC--CCHHHHHHHcCCHH
Confidence 3444 4444444443 45678899999999999998 78887 556667777766 34 89999884 3
Q ss_pred HHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCC
Q 002124 492 LERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDG 571 (964)
Q Consensus 492 lvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~g 571 (964)
++++|+..++ +++..+..+.++++.+...+...++++|+++|
T Consensus 77 ~v~~Ll~~ga--------------------------------------~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 118 (285)
T 3kea_A 77 IVKILLFSGL--------------------------------------DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN 118 (285)
T ss_dssp HHHHHHHTTC--------------------------------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHHCCC--------------------------------------CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC
Confidence 3444443333 23333444556666667777778899999999
Q ss_pred CCCCccCCCC-CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 002124 572 KGPCILDDEG-QGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEF 650 (964)
Q Consensus 572 ad~n~~D~~G-~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D 650 (964)
++++.+|..| .||||+|+..|+.+++++|+++|+++... ..|+||||+|+..|+.+++++|+++|++++. +|
T Consensus 119 a~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~------~~ 191 (285)
T 3kea_A 119 WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNT------NN 191 (285)
T ss_dssp GGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCT------TC
T ss_pred CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCc------cc
Confidence 9999999999 79999999999999999999999887322 2899999999999999999999999999887 45
Q ss_pred CCCCCH-HHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhhHhHHHHHHHccCCCCC
Q 002124 651 PLSRTP-SDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPAN 715 (964)
Q Consensus 651 ~~G~TP-LhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~~~iv~~Lle~ga~~~~ 715 (964)
..|+|| ||+|+..|+.+++++|+++| ++++..|. .+......+++++|+++|++...
T Consensus 192 ~~g~t~~L~~A~~~~~~~~v~~Ll~~g-----ad~~~~~~---~a~~~~~~~iv~~Ll~~g~~~~~ 249 (285)
T 3kea_A 192 SLLFIPDIKLAIDNKDIEMLQALFKYD-----INIYSANL---ENVLLDDAEIAKMIIEKHVEYKS 249 (285)
T ss_dssp CCBCCTTHHHHHHHTCHHHHHHHTTSC-----BCSTTTTG---GGGTTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCh---hhhhcCCHHHHHHHHHcCCCCCC
Confidence 799998 99999999999999999999 88888775 22334568999999999976554
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=1.2e-25 Score=233.07 Aligned_cols=209 Identities=18% Similarity=0.145 Sum_probs=173.6
Q ss_pred chhhhhhhhccCCCCCccc-CCCCCCccHHHHHHHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcC
Q 002124 458 SEVREFDYIVGSVKDADIS-DIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEAN 536 (964)
Q Consensus 458 seVv~feyl~~~~a~vn~~-d~~g~~~t~Lhla~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~ 536 (964)
.++++ ++...+.+++.. |.+| .||||+|++..+ .+.++.|+ ..
T Consensus 4 ~~~i~--~Ll~~g~~~~~~~d~~g--~t~L~~A~~~g~------------------------------~~~v~~Ll-~~- 47 (223)
T 2f8y_A 4 PAVIS--DFIYQGASLHNQTDRTG--ETALHLAARYSR------------------------------SDAAKRLL-EA- 47 (223)
T ss_dssp -CCEE--TTEETTCCTTCCCTTTC--CCHHHHHHHTTC------------------------------HHHHHHHH-HT-
T ss_pred HHHHH--HHHHcCCCcccccCCCC--CchHHHHHHcCC------------------------------HHHHHHHH-Hc-
Confidence 45555 667777777654 4554 888888754211 13444444 21
Q ss_pred CCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCC-CCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCC
Q 002124 537 PEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGK-GPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGW 615 (964)
Q Consensus 537 ~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~ga-d~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~ 615 (964)
+.+++..+..+.++++.+...+...++++|++.+. +++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 48 -g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 126 (223)
T 2f8y_A 48 -SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK 126 (223)
T ss_dssp -TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSC
T ss_pred -CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCC
Confidence 23333444556677788888888899999999987 8999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHH
Q 002124 616 TALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGAL 695 (964)
Q Consensus 616 TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl 695 (964)
||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l 195 (223)
T 2f8y_A 127 SALHWAAAVNNVDAAVVLLKNGANKDM------QNNREETPLFLAAREGSYETAKVLLDHF-----ANRDITDHMDRLPR 195 (223)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTCCCHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCcCHHHHHHHcCCHHHHHHHHHcC-----CCCccccccCCCHH
Confidence 999999999999999999999999987 4579999999999999999999999999 88999999999999
Q ss_pred HHhh----HhHHHHHHHccCCCC
Q 002124 696 EDSI----AKAVQTVSEKTATPA 714 (964)
Q Consensus 696 ~~a~----~~iv~~Lle~ga~~~ 714 (964)
++|. .+++++|+++|+...
T Consensus 196 ~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 196 DIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp HHHHHTTCHHHHHHHHHTTCSSC
T ss_pred HHHHHhcchHHHHHHHHcCCCcc
Confidence 9985 699999999998543
No 35
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=3e-26 Score=240.61 Aligned_cols=139 Identities=21% Similarity=0.221 Sum_probs=73.3
Q ss_pred HHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC------CcccCCCCChHHHHHHHcCCHHHHHHHHHc
Q 002124 563 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVS------INFRDLSGWTALHWAAYCGREKTVAVLLSL 636 (964)
Q Consensus 563 lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gad------vn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~ 636 (964)
++++|++.|++++.+|..|+||||+||..|+.+++++|++.|++ ++..|..|+||||+|+..|+.+++++|+++
T Consensus 60 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 139 (236)
T 1ikn_D 60 IAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL 139 (236)
T ss_dssp HHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 34444445555555555555555555555555555555555543 344445555555555555555555555555
Q ss_pred CCCCCCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccC
Q 002124 637 GAAPGLLTDPSPEFP-LSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTA 711 (964)
Q Consensus 637 GAdvn~~~d~~~~D~-~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga 711 (964)
|++++.. |. .|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .++++.|+++|+
T Consensus 140 g~~~~~~------~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 140 GADVNAQ------EPCNGRTALHLAVDLQNPDLVSLLLKCG-----ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp TCCTTCC------CTTTCCCHHHHHHHTTCHHHHHHHHTTT-----CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred CCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 5555442 22 5555555555555555555555555 455555555555555552 455555555555
Q ss_pred C
Q 002124 712 T 712 (964)
Q Consensus 712 ~ 712 (964)
+
T Consensus 209 ~ 209 (236)
T 1ikn_D 209 E 209 (236)
T ss_dssp G
T ss_pred h
Confidence 3
No 36
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=1.6e-25 Score=228.33 Aligned_cols=188 Identities=21% Similarity=0.166 Sum_probs=157.8
Q ss_pred ccccchhhhcCChHHHHHHHHcCC-CCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHH
Q 002124 409 VAKCKWSCMFAEVEVPAEVLADGV-LCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESF 487 (964)
Q Consensus 409 ~~~~~~Ac~fG~veVv~~LL~~Gv-lrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lh 487 (964)
.+.+++||..|+.++++.|+..+. + .+..+..|.||||+||..|+ .++++ ++...+++++..+..| .||||
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~--~~~~~~~g~t~L~~A~~~~~--~~~v~--~Ll~~g~~~~~~~~~g--~t~l~ 77 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQ--VDEVDTEGNTPLNIAVHNND--IEIAK--ALIDRGADINLQNSIS--DSPYL 77 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCC--TTCCCTTSCCHHHHHHHHTC--HHHHH--HHHHTTCCTTCCCTTS--CCHHH
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCC--CCCCCCCCCCHHHHHHHcCC--HHHHH--HHHHcCCCCCCCCCCC--CCHHH
Confidence 356788999999999988888876 4 55667888999999998888 77777 5556677777776665 66666
Q ss_pred HHHHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHH
Q 002124 488 LHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKV 567 (964)
Q Consensus 488 la~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~L 567 (964)
+|+. .+...++++|
T Consensus 78 ~A~~------------------------------------------------------------------~~~~~~~~~L 91 (201)
T 3hra_A 78 YAGA------------------------------------------------------------------QGRTEILAYM 91 (201)
T ss_dssp HHHH------------------------------------------------------------------TTCHHHHHHH
T ss_pred HHHH------------------------------------------------------------------cCCHHHHHHH
Confidence 5432 2223456666
Q ss_pred H-HCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCcccCCCCChHHHHHHHcCC-----HHHHHHHHHcCCCC
Q 002124 568 C-EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGR-----EKTVAVLLSLGAAP 640 (964)
Q Consensus 568 l-~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~G-advn~~D~~G~TPLH~Aa~~G~-----~eiV~~LL~~GAdv 640 (964)
+ ..+.+++..|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|. .+++++|+++|+++
T Consensus 92 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~ 171 (201)
T 3hra_A 92 LKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ 171 (201)
T ss_dssp HHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT
T ss_pred HhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC
Confidence 6 567799999999999999999999999999999999 9999999999999999999998 99999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 641 GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 641 n~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
+. +|..|.||||+|+..|+.+++++|+++|
T Consensus 172 ~~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 172 SI------KDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp TC------CCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred Cc------cCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 87 4579999999999999999999999876
No 37
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.93 E-value=2.4e-24 Score=224.37 Aligned_cols=205 Identities=19% Similarity=0.142 Sum_probs=174.3
Q ss_pred cccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHH
Q 002124 510 LCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAA 589 (964)
Q Consensus 510 g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa 589 (964)
+.++++.++..+.+ +.+..++.... ..++..+..+.++++.+...+...++++|++.|++++.+|..|+||||+|+
T Consensus 6 ~~~~l~~A~~~g~~--~~v~~ll~~~~--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 81 (231)
T 3aji_A 6 SNIMICNLAYSGKL--DELKERILADK--SLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAA 81 (231)
T ss_dssp SSSHHHHHHHHTCH--HHHHHHHHHCG--GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred ccchHHHHHHhCCH--HHHHHHHHhch--hhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHH
Confidence 44556666555554 56666662221 123334566778888888899999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 002124 590 SLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGIS 669 (964)
Q Consensus 590 ~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv 669 (964)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++
T Consensus 82 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v 155 (231)
T 3aji_A 82 SAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA------KDHYDATAMHRAAAKGNLKMV 155 (231)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHH
T ss_pred HcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCcHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999999999999999999999999887 457999999999999999999
Q ss_pred HHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCCCCCCCccccccccccchhhhhhhh
Q 002124 670 GFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQ 737 (964)
Q Consensus 670 ~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~~~~d~~~~l~Lkd~ltA~~~Aaq 737 (964)
++|+++| ++++.+|..|.||+++|. .++++.|+++|+++.. ..+.+.++++.|..
T Consensus 156 ~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--------~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 156 HILLFYK-----ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYI--------ENKEEKTPLQVAKG 214 (231)
T ss_dssp HHHHHTT-----CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC--------CCTTSCCHHHHSCH
T ss_pred HHHHhcC-----CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC--------CCCCCCCHHHHHHh
Confidence 9999999 899999999999999984 6999999999987654 23566777777754
No 38
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.93 E-value=1.6e-24 Score=232.03 Aligned_cols=202 Identities=12% Similarity=-0.024 Sum_probs=170.0
Q ss_pred cccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHH
Q 002124 510 LCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAA 589 (964)
Q Consensus 510 g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa 589 (964)
|.+++|+++..+.. +.++.++ .. +.+++..+..+.++++.+...+...+++.|++.|++++.+|..|+||||+||
T Consensus 3 g~t~L~~A~~~g~~--~~v~~Ll-~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 77 (261)
T 2xai_A 3 DWSPMHEAAIHGHQ--LSLRNLI-SQ--GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNAC 77 (261)
T ss_dssp -CCHHHHHHHHTCH--HHHHHHH-HT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHcCCH--HHHHHHH-HC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 44555555554444 6666666 22 3445555667788888888888899999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 002124 590 SLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGIS 669 (964)
Q Consensus 590 ~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv 669 (964)
..|+.+++++|+++|++++. +..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v 150 (261)
T 2xai_A 78 VSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDH------KISHLGTPLYLACENQQRACV 150 (261)
T ss_dssp HHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CBTTTBCHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc------CCCCCCCHHHHHHHhCCHHHH
Confidence 99999999999999999985 45699999999999999999999999999887 457999999999999999999
Q ss_pred HHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCCCCCCCccccccccccchhhhhhhh
Q 002124 670 GFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQ 737 (964)
Q Consensus 670 ~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~~~~d~~~~l~Lkd~ltA~~~Aaq 737 (964)
++|+++| ++++. +..|.||+|.|. .++++.|++.|++++. ..+.+.++++.|+.
T Consensus 151 ~~Ll~~g-----~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~--------~d~~g~tpl~~A~~ 208 (261)
T 2xai_A 151 KKLLESG-----ADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQA--------KNAEGKRPVELVPP 208 (261)
T ss_dssp HHHHHHT-----CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTC--------CCTTSCCGGGGSCT
T ss_pred HHHHHcC-----CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC--------cCCCCCChhhhccc
Confidence 9999999 77775 777999999984 7999999999997664 23567788887764
No 39
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.92 E-value=4.3e-25 Score=239.29 Aligned_cols=171 Identities=23% Similarity=0.191 Sum_probs=139.1
Q ss_pred chHHHHHHH-HhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCC
Q 002124 548 YQILQKIMK-EKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGR 626 (964)
Q Consensus 548 ~~~ll~~a~-~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~ 626 (964)
+.++++.+. ......++++|++.|+++|.+|..|+||||+||..|+.++|++|++.|++++.++..|.||||+|+..++
T Consensus 52 ~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~ 131 (269)
T 4b93_B 52 FCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGH 131 (269)
T ss_dssp -----------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccCh
Confidence 334444443 3444567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhH
Q 002124 627 EKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKA 702 (964)
Q Consensus 627 ~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~i 702 (964)
.+++++|+++|++++. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||||+|. .++
T Consensus 132 ~~~~~~Ll~~g~~~n~------~d~~g~TpL~~A~~~g~~~~v~~Ll~~g-----advn~~~~~g~t~Lh~A~~~g~~~~ 200 (269)
T 4b93_B 132 FQVVKCLLDSNAKPNK------KDLSGNTPLIYACSGGHHELVALLLQHG-----ASINASNNKGNTALHEAVIEKHVFV 200 (269)
T ss_dssp HHHHHHHHHTTCCSCC------CCTTCCCHHHHHHHTTCGGGHHHHHHTT-----CCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCccccCCCcHHHHHHHcCCHHH
Confidence 9999999999999987 5579999999999999999999999999 899999999999999995 699
Q ss_pred HHHHHHccCCCCCCCCccccccccccchhhhhhhh
Q 002124 703 VQTVSEKTATPANDNDESDVLSLKDSLTAICNATQ 737 (964)
Q Consensus 703 v~~Lle~ga~~~~~~d~~~~l~Lkd~ltA~~~Aaq 737 (964)
|++|+++|++++.. .+.+.|+++.|++
T Consensus 201 v~~Ll~~Gad~~~~--------d~~G~TpL~~A~~ 227 (269)
T 4b93_B 201 VELLLLHGASVQVL--------NKRQRTAVDCAEQ 227 (269)
T ss_dssp HHHHHHTTCCSCCC--------CTTSCCSGGGSCT
T ss_pred HHHHHHCCCCCCCc--------CCCCCCHHHHHHh
Confidence 99999999977642 3567788888765
No 40
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.92 E-value=7.1e-25 Score=221.83 Aligned_cols=158 Identities=22% Similarity=0.224 Sum_probs=136.1
Q ss_pred HHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcC
Q 002124 513 KQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG 592 (964)
Q Consensus 513 ~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G 592 (964)
++..|+..++. +.++.|+ . .+.+++..+..+.++++.+...+...+++.|++.|++++.+|..|+||||+||..|
T Consensus 7 ~L~~Aa~~G~~--~~v~~Ll-~--~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g 81 (169)
T 4gpm_A 7 RLIEAAENGNK--DRVKDLI-E--NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG 81 (169)
T ss_dssp HHHHHHHTTCH--HHHHHHH-H--TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHcCCH--HHHHHHH-H--CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcC
Confidence 45555555544 7777777 3 34566666777888889999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 002124 593 YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 672 (964)
Q Consensus 593 ~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~L 672 (964)
+.++|++|+++|+++|.+|..|+||||+||..|+.++|++|+++|++++. +|..|+||||+|+..|+.+++++|
T Consensus 82 ~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~------~d~~G~TpL~~A~~~g~~~iv~~L 155 (169)
T 4gpm_A 82 HKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNT------SDSDGRTPLDLAREHGNEEVVKLL 155 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 557999999999999999999999
Q ss_pred HHcCCCCcccCCcc
Q 002124 673 AESSLTSLLLSLKM 686 (964)
Q Consensus 673 Le~G~~~~ladvn~ 686 (964)
+++| ++++.
T Consensus 156 l~~G-----A~ie~ 164 (169)
T 4gpm_A 156 EKQG-----GWLEH 164 (169)
T ss_dssp HTC-----------
T ss_pred HHCC-----CCcCC
Confidence 9999 66653
No 41
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.92 E-value=1.6e-25 Score=240.55 Aligned_cols=146 Identities=22% Similarity=0.144 Sum_probs=116.9
Q ss_pred cccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCC--------------CCCcHHHHHHHcCCHHHHHHHHh---CCCCC
Q 002124 545 VEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDD--------------EGQGVLHLAASLGYDWAIKPTVT---AGVSI 607 (964)
Q Consensus 545 ~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~--------------~G~TpLHlAa~~G~~~iVk~LL~---~Gadv 607 (964)
+..+.++++.+...+...++++|+++|++++.++. .|.||||+||..|+.+++++|++ +|+++
T Consensus 98 d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~ 177 (273)
T 2pnn_A 98 YYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI 177 (273)
T ss_dssp TTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred cCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc
Confidence 34577888888888999999999999999999987 79999999999999999999999 89999
Q ss_pred cccCCCCChHHHHHHHcCC---------HHHHHHHHHcCCCCCCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 002124 608 NFRDLSGWTALHWAAYCGR---------EKTVAVLLSLGAAPGLLTD-PSPEFPLSRTPSDLASSNGHKGISGFLAESSL 677 (964)
Q Consensus 608 n~~D~~G~TPLH~Aa~~G~---------~eiV~~LL~~GAdvn~~~d-~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~ 677 (964)
+.+|..|+||||+|+..|+ .+++++|+++|++++.... .+.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 178 ~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 178 SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCC
Confidence 9999999999999999998 7999999999999874210 02256899999999999999999999999993
Q ss_pred CCcccCCccCCCCCCcH
Q 002124 678 TSLLLSLKMNDSADDGA 694 (964)
Q Consensus 678 ~~~ladvn~~d~~G~tp 694 (964)
.|.......+.+|
T Consensus 258 ----~dp~~~~~~~~~~ 270 (273)
T 2pnn_A 258 ----HEPECRHAAAHHH 270 (273)
T ss_dssp ----C------------
T ss_pred ----CCchhhhhhhhhc
Confidence 2666665555544
No 42
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.92 E-value=1.8e-25 Score=248.30 Aligned_cols=256 Identities=13% Similarity=0.014 Sum_probs=150.2
Q ss_pred CCCCCcceeecccCCcccchhhhhhhhccCCCCCcccCCCCCCccHHHHHHHHHHHHhhCCCCCCCCcc-----------
Q 002124 440 HAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSE----------- 508 (964)
Q Consensus 440 ~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a~vn~~d~~g~~~t~Lhla~rlvkLLl~~~~~~~~~~~----------- 508 (964)
+..+.+|+|... .+++. |+...|++++..+..| .++++....++++|+..+++.+....
T Consensus 20 ~~~~~~~~~~~~------~dlv~--~ll~~ga~i~~~~~~g--~~~~~g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~ 89 (327)
T 1sw6_A 20 NDRTAGPIITFT------HDLTS--DFLSSPLKIMKALPSP--VVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNR 89 (327)
T ss_dssp -----CCEEECC------TTCCC--STTTSSCCCEECBCCC--CCCCHHHHHHHHHHHHHHHC-----------------
T ss_pred ccccccchhhhc------CchHH--HHhhCCcccccCCCCC--CcccCchhHHHHHHHHhccCCccccchHhhhcccccc
Confidence 455778888522 24455 7788889999888776 88888999999999987744322100
Q ss_pred ---ccccH---HHHHHHHhhhhhhhHHHHhhhcCCCCCCcc-ccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCC
Q 002124 509 ---GLCEK---QKLISKIIQLKEEEESYQMVEANPEKNLSQ-HVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEG 581 (964)
Q Consensus 509 ---~g~~~---l~la~~i~~ll~~~~~~Ll~~~~~~~~is~-~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G 581 (964)
.+.+. .+++ ....+ .+....++ ..+.+++. .+..+.+++|+++..++..++++|+++|++++.+|..|
T Consensus 90 ~~~~~~~~~~~~~~a-~~~~~-~~~~~~l~---~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g 164 (327)
T 1sw6_A 90 NSEGGSSNQQQQHVS-FDSLL-QEVNDAFP---NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMG 164 (327)
T ss_dssp --------------C-HHHHH-HHHHHHCT---TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTC
T ss_pred cccccCCccchhHHH-HHhhH-HHHHHHHH---hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 00000 0111 11111 12222222 23344554 45666777777777777777777777777777777777
Q ss_pred CcHHHHHHHcCC---HHHHHHHHhCC-CCCcccCCCCChHHHHHHH----cCCHHHHHHHHHc-----------------
Q 002124 582 QGVLHLAASLGY---DWAIKPTVTAG-VSINFRDLSGWTALHWAAY----CGREKTVAVLLSL----------------- 636 (964)
Q Consensus 582 ~TpLHlAa~~G~---~~iVk~LL~~G-advn~~D~~G~TPLH~Aa~----~G~~eiV~~LL~~----------------- 636 (964)
+||||+||..|+ .++++.|++.+ ++++.+|..|+||||+|+. .|+.+++++|++.
T Consensus 165 ~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~ 244 (327)
T 1sw6_A 165 ESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT 244 (327)
T ss_dssp CCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-
T ss_pred CCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhh
Confidence 777777777776 56666666664 6677777777777777777 7777777777766
Q ss_pred ---CCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHc
Q 002124 637 ---GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEK 709 (964)
Q Consensus 637 ---GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ 709 (964)
|++++. +|..|.||||+|+. +++|+++ +++.+|..|+||||+|. .++|++|+++
T Consensus 245 ~~~g~~~~~------~~~~g~t~L~~a~~------~~~Ll~~-------~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ 305 (327)
T 1sw6_A 245 NEKESKPND------KNGERKDSILENLD------LKWIIAN-------MLNAQDSNGDTCLNIAARLGNISIVDALLDY 305 (327)
T ss_dssp ---------------------CHHHHHCS------HHHHHHH-------TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHT
T ss_pred hcccCCccc------ccccCCChhHHHHH------HHHHHHh-------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 555554 33455555555553 5555553 36677777777777774 5777777777
Q ss_pred cCCCCCCCCccccccccccchhhhhhhh
Q 002124 710 TATPANDNDESDVLSLKDSLTAICNATQ 737 (964)
Q Consensus 710 ga~~~~~~d~~~~l~Lkd~ltA~~~Aaq 737 (964)
|++++. ..+.+.++++.|++
T Consensus 306 Gad~~~--------~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 306 GADPFI--------ANKSGLRPVDFGAG 325 (327)
T ss_dssp TCCTTC--------CCTTSCCGGGGTCC
T ss_pred CCCCcc--------cCCCCCCHHHHHHh
Confidence 776553 23456666666654
No 43
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=1.1e-25 Score=239.12 Aligned_cols=131 Identities=20% Similarity=0.079 Sum_probs=117.7
Q ss_pred ccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCC-------------CCcHHHHHHHcCCHHHHHHHHh---CCCCCcc
Q 002124 546 EKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDE-------------GQGVLHLAASLGYDWAIKPTVT---AGVSINF 609 (964)
Q Consensus 546 ~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~-------------G~TpLHlAa~~G~~~iVk~LL~---~Gadvn~ 609 (964)
..+.++++.+...+...++++|++.|++++.+|.. |+||||+||..|+.+++++|++ +|+++|.
T Consensus 88 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~ 167 (256)
T 2etb_A 88 YQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA 167 (256)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc
Confidence 45778889999999999999999999999999886 9999999999999999999999 9999999
Q ss_pred cCCCCChHHHHHHH--cCCHH-------HHHHHHHcCCCCCCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 610 RDLSGWTALHWAAY--CGREK-------TVAVLLSLGAAPGLLTDP-SPEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 610 ~D~~G~TPLH~Aa~--~G~~e-------iV~~LL~~GAdvn~~~d~-~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
+|..|+||||+|+. .++.+ ++++|+++|++++..... +.+|..|+||||+|+..|+.+++++|+++|
T Consensus 168 ~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 168 TDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 99999999999999 88888 999999999998311000 225689999999999999999999999998
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.92 E-value=2.5e-25 Score=233.62 Aligned_cols=204 Identities=18% Similarity=0.076 Sum_probs=169.6
Q ss_pred cCCCCCCccHHHHHHHH-----HHHHhhCC----CCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccc
Q 002124 476 SDIYGSSTSESFLHLRL-----ERILSMRS----SPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVE 546 (964)
Q Consensus 476 ~d~~g~~~t~Lhla~rl-----vkLLl~~~----~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~ 546 (964)
.|.+| .||||+|+.. ++.|+..+ +..+..+..|.+++|+++..+.. +.+..|+ ..+.+++..+.
T Consensus 4 ~d~~g--~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll---~~g~~~~~~~~ 76 (236)
T 1ikn_D 4 LTEDG--DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQP--EIAEALL---GAGCDPELRDF 76 (236)
T ss_dssp ---CC--CCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCH--HHHHCCC---SCCCCSCCCCT
T ss_pred CCCCC--CchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCH--HHHHHHH---HcCCCCCCcCC
Confidence 34555 9999999654 34555554 36788889999999999777665 7777776 33456666667
Q ss_pred cchHHHHHHHHhCHHHHHHHHHHCCCC------CCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCC-CCChHHH
Q 002124 547 KYQILQKIMKEKLYSWLLRKVCEDGKG------PCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL-SGWTALH 619 (964)
Q Consensus 547 ~~~~ll~~a~~~~~~~lvk~Ll~~gad------~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~-~G~TPLH 619 (964)
.+.++++.++..+...++++|++.|.+ ++..|..|.||||+||..|+.+++++|+++|++++.+|. .|+||||
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALH 156 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Confidence 788999999999999999999999876 466788999999999999999999999999999999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCc--cCCCCCCcHHHH
Q 002124 620 WAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLK--MNDSADDGALED 697 (964)
Q Consensus 620 ~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn--~~d~~G~tpl~~ 697 (964)
+|+..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++.. ..+..|.+|.+.
T Consensus 157 ~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~~~~~~~Ll~~g-----a~~~~~~~~~~~~~~~~~ 225 (236)
T 1ikn_D 157 LAVDLQNPDLVSLLLKCGADVNR------VTYQGYSPYQLTWGRPSTRIQQQLGQLT-----LENLQMLPESEDEESYDT 225 (236)
T ss_dssp HHHHTTCHHHHHHHHTTTCCSCC------CCTTCCCGGGGCTTSSCHHHHHHHHTTS-----CGGGSSCCCCCTTTCCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCc------ccCCCCCHHHHHHccCchHHHHHHHHcc-----hhhhhcCCccchHHHHhh
Confidence 99999999999999999999987 4579999999999999999999999999 4443 677777777544
No 45
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.92 E-value=3.1e-24 Score=224.02 Aligned_cols=194 Identities=18% Similarity=0.056 Sum_probs=158.9
Q ss_pred ccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCC-----CccCCCCCcHH
Q 002124 511 CEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGP-----CILDDEGQGVL 585 (964)
Q Consensus 511 ~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~-----n~~D~~G~TpL 585 (964)
.+++|+++..+.. +.+..++ . ..+.+++..+..+.++++.++..+...++++|++.|+++ +..|..|+|||
T Consensus 4 ~t~L~~A~~~g~~--~~v~~Ll-~-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L 79 (232)
T 2rfa_A 4 ESPLLLAAKENDV--QALSKLL-K-FEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTAL 79 (232)
T ss_dssp TCHHHHHHHTTCH--HHHHHHH-T-TTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHH
T ss_pred CCHHHHHHHcCCH--HHHHHHH-H-hcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHH
Confidence 4455555444433 5566666 2 123455555667788888888888889999999999887 67788999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCcccCC-------------CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 002124 586 HLAASLGYDWAIKPTVTAGVSINFRDL-------------SGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPL 652 (964)
Q Consensus 586 HlAa~~G~~~iVk~LL~~Gadvn~~D~-------------~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~ 652 (964)
|+||..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++. +|..
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~ 153 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA------QDSL 153 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTT
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCC
Confidence 999999999999999999999998876 799999999999999999999999999988 4579
Q ss_pred CCCHHHHHHHcCCHHHH----HHHHHcCCCCcccCC-ccCCCCCCcHHHHhh----HhHHHHHHHccCCCC
Q 002124 653 SRTPSDLASSNGHKGIS----GFLAESSLTSLLLSL-KMNDSADDGALEDSI----AKAVQTVSEKTATPA 714 (964)
Q Consensus 653 G~TPLhlAa~~G~~eiv----~~LLe~G~~~~ladv-n~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~ 714 (964)
|+||||+|+..|+.+++ ++|+++|.......+ +.+|..|.||+++|. .++++.|+++|+...
T Consensus 154 g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 154 GNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp SCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 99999999999999988 999999943322222 688999999999985 799999999987544
No 46
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.92 E-value=7.2e-24 Score=220.04 Aligned_cols=205 Identities=15% Similarity=-0.008 Sum_probs=168.2
Q ss_pred ccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCC--CCCCc-cCCCCCcHHHH
Q 002124 511 CEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDG--KGPCI-LDDEGQGVLHL 587 (964)
Q Consensus 511 ~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~g--ad~n~-~D~~G~TpLHl 587 (964)
.+++++++..+.. +.+..++..... .....+..+.++++.+...+...+++.|++.| .+++. .|..|+||||+
T Consensus 3 ~t~L~~A~~~g~~--~~v~~Ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~ 78 (228)
T 2dzn_A 3 NYPLHQACMENEF--FKVQELLHSKPS--LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHI 78 (228)
T ss_dssp CCHHHHHHHTTCH--HHHHHHHHHCGG--GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHH
T ss_pred ccHHHHHHHhCCH--HHHHHHHhcCcc--ccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHH
Confidence 3455555444443 556666622211 11223456778888888899999999999999 55555 78899999999
Q ss_pred HHHcCCHHHHHHHHhCC--CCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCC
Q 002124 588 AASLGYDWAIKPTVTAG--VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH 665 (964)
Q Consensus 588 Aa~~G~~~iVk~LL~~G--advn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~ 665 (964)
||..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|+||||+|+..|+
T Consensus 79 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~ 152 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRI------KDKFNQIPLHRAASVGS 152 (228)
T ss_dssp HHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC------CCTTSCCHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccc------cCCCCCCHHHHHHHcCC
Confidence 99999999999999998 99999999999999999999999999999999999887 45799999999999999
Q ss_pred HHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHH-HccCCCCCCCCccccccccccchhhhhhhh
Q 002124 666 KGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVS-EKTATPANDNDESDVLSLKDSLTAICNATQ 737 (964)
Q Consensus 666 ~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Ll-e~ga~~~~~~d~~~~l~Lkd~ltA~~~Aaq 737 (964)
.+++++|++.|. ++++.+|..|.||+++|. .++++.|+ +.|+++.. ..+.+.++++.|.+
T Consensus 153 ~~~v~~Ll~~g~----~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~--------~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 153 LKLIELLCGLGK----SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL--------VDNKGAKAEDVALN 217 (228)
T ss_dssp HHHHHHHHTTTC----CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCC--------BCTTSCBGGGGCSS
T ss_pred HHHHHHHHhcCc----ccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCc--------cCCCCCcHHHHHHH
Confidence 999999999884 678999999999999984 69999999 88987664 23466777777754
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=9.1e-24 Score=215.29 Aligned_cols=186 Identities=12% Similarity=0.045 Sum_probs=156.6
Q ss_pred cccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHH
Q 002124 510 LCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAA 589 (964)
Q Consensus 510 g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa 589 (964)
+.++++.++..+.. +.+..++ . ....+++..+..+.++++.+...+...++++|++.|++++.+|..|.||||+|+
T Consensus 5 ~~~~L~~A~~~g~~--~~v~~ll-~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 5 EVGALLEAANQRDT--KKVKEIL-Q-DTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAG 80 (201)
T ss_dssp CTTHHHHHHHTTCH--HHHHHHH-T-CTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cccHHHHHHHhccH--HHHHHHH-H-cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 34455555444443 5556665 2 222245555566778888888888899999999999999999999999999999
Q ss_pred HcCCHHHHHHHH-hCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCC--
Q 002124 590 SLGYDWAIKPTV-TAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG-AAPGLLTDPSPEFPLSRTPSDLASSNGH-- 665 (964)
Q Consensus 590 ~~G~~~iVk~LL-~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~G-Advn~~~d~~~~D~~G~TPLhlAa~~G~-- 665 (964)
..|+.+++++|+ ..+++++.+|..|.||||+|+..|+.+++++|+++| ++++. +|..|+||||+|+..|.
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~~g~t~L~~A~~~~~~~ 154 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDF------QNDFGYTALIEAVGLREGN 154 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTC------CCTTSCCHHHHHHHSSCCS
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC------CCCCCCCHHHHHHHhccch
Confidence 999999999999 578899999999999999999999999999999999 88877 55799999999999988
Q ss_pred ---HHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHcc
Q 002124 666 ---KGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKT 710 (964)
Q Consensus 666 ---~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~g 710 (964)
.+++++|+++| ++++.+|..|.||+++|. .++++.|+++|
T Consensus 155 ~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 155 QLYQDIVKLLMENG-----ADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred hhHHHHHHHHHHCC-----CCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999999 899999999999999984 68899998875
No 48
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=4.1e-25 Score=235.03 Aligned_cols=204 Identities=14% Similarity=0.000 Sum_probs=159.9
Q ss_pred cccchhhhcCChHHHHHHHH----cCCCCCCCCC----CCCCCcceeecc---cCCcccchhhhhhhhccCCCCCcccCC
Q 002124 410 AKCKWSCMFAEVEVPAEVLA----DGVLCCRIPP----HAVGRVPFYITC---SNRLACSEVREFDYIVGSVKDADISDI 478 (964)
Q Consensus 410 ~~~~~Ac~fG~veVv~~LL~----~GvlrC~~p~----~~~G~TPLhvA~---~ng~~~seVv~feyl~~~~a~vn~~d~ 478 (964)
+.++.||..|+.+.++.|++ .|.. .+.. +..|+||||+|+ ..|+ .+++++++ ..+++.+
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~l~~~~~~--~~~~~~~~~~~g~t~L~~A~~~~~~g~--~~~v~~Ll--~~g~~~~---- 76 (260)
T 3jxi_A 7 PILFDIVSRGSPDGLEGLLSFLLTHKKR--LTDEEFREPSTGKTCLPKALLNLSAGR--NDTIPILL--DIAEKTG---- 76 (260)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCC--TTSGGGSCTTTCCCHHHHHHTSCBTTB--CTHHHHHH--HHHHHTT----
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCC--cchhhhhccCCCCcHHHHHHHHhhcCC--HHHHHHHH--Hhccccc----
Confidence 46789999999996665555 8877 3333 377999999888 6677 77777433 2221100
Q ss_pred CCCCccHHHHHHHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHh
Q 002124 479 YGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEK 558 (964)
Q Consensus 479 ~g~~~t~Lhla~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~ 558 (964)
....++ ...+...+..+.++++.|+..
T Consensus 77 ------------------------------------------------~~~~~~-----~~~~~~~d~~g~t~L~~A~~~ 103 (260)
T 3jxi_A 77 ------------------------------------------------NMREFI-----NSPFRDVYYRGQTALHIAIER 103 (260)
T ss_dssp ------------------------------------------------CHHHHH-----TCCBCCSSEESBCHHHHHHHT
T ss_pred ------------------------------------------------chHhhh-----cccccccccCCCCHHHHHHHc
Confidence 001111 122222334567788888888
Q ss_pred CHHHHHHHHHHCCCCCCccC--------------CCCCcHHHHHHHcCCHHHHHHHHh---CCCCCcccCCCCChHHHHH
Q 002124 559 LYSWLLRKVCEDGKGPCILD--------------DEGQGVLHLAASLGYDWAIKPTVT---AGVSINFRDLSGWTALHWA 621 (964)
Q Consensus 559 ~~~~lvk~Ll~~gad~n~~D--------------~~G~TpLHlAa~~G~~~iVk~LL~---~Gadvn~~D~~G~TPLH~A 621 (964)
++..++++|++.|++++.+| ..|+||||+||..|+.++|++|++ +|++++.+|..|+||||+|
T Consensus 104 g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A 183 (260)
T 3jxi_A 104 RCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHAL 183 (260)
T ss_dssp TCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHH
Confidence 88899999999999999998 689999999999999999999999 9999999999999999999
Q ss_pred HHcCC---------HHHHHHHHHcCCCCCCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 622 AYCGR---------EKTVAVLLSLGAAPGLLTD-PSPEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 622 a~~G~---------~eiV~~LL~~GAdvn~~~d-~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
+..|+ .+++++|+++|++++.... .+.+|..|+||||+|+..|+.+++++|+++|
T Consensus 184 ~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 184 VAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp HHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 99888 7999999999999843110 0236689999999999999999999999998
No 49
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.91 E-value=2e-24 Score=235.23 Aligned_cols=157 Identities=16% Similarity=0.071 Sum_probs=145.0
Q ss_pred chHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCC-ChHHHHHHHcCC
Q 002124 548 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSG-WTALHWAAYCGR 626 (964)
Q Consensus 548 ~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G-~TPLH~Aa~~G~ 626 (964)
+.++++.++..+...++++|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..| .||||+|+..|+
T Consensus 62 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~ 141 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND 141 (285)
T ss_dssp TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCC
Confidence 5677888888888899999999999999999999999999999999999999999999999999999 799999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcH-HHHhh----Hh
Q 002124 627 EKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGA-LEDSI----AK 701 (964)
Q Consensus 627 ~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tp-l~~a~----~~ 701 (964)
.+++++|+++|+++.. ...|.||||+|+..|+.+++++|+++| ++++.+|..|.|| +++|. .+
T Consensus 142 ~~~v~~Ll~~g~~~~~-------~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~n~~~~~g~t~~L~~A~~~~~~~ 209 (285)
T 3kea_A 142 VSIVSYFLSEIPSTFD-------LAILLSCIHITIKNGHVDMMILLLDYM-----TSTNTNNSLLFIPDIKLAIDNKDIE 209 (285)
T ss_dssp HHHHHHHHTTSCTTCC-------CSTHHHHHHHHHHTTCHHHHHHHHHHH-----HHTCTTCCCBCCTTHHHHHHHTCHH
T ss_pred HHHHHHHHhCCCcccc-------ccCCccHHHHHHHcChHHHHHHHHHcC-----CCCCcccCCCCChHHHHHHHcCCHH
Confidence 9999999999987622 128999999999999999999999999 9999999999998 99884 69
Q ss_pred HHHHHHHccCCCCCC
Q 002124 702 AVQTVSEKTATPAND 716 (964)
Q Consensus 702 iv~~Lle~ga~~~~~ 716 (964)
++++|+++|++++..
T Consensus 210 ~v~~Ll~~gad~~~~ 224 (285)
T 3kea_A 210 MLQALFKYDINIYSA 224 (285)
T ss_dssp HHHHHTTSCBCSTTT
T ss_pred HHHHHHHcCCCCCCC
Confidence 999999999987753
No 50
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.91 E-value=1.5e-23 Score=209.46 Aligned_cols=154 Identities=24% Similarity=0.190 Sum_probs=142.5
Q ss_pred ccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcC
Q 002124 546 EKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCG 625 (964)
Q Consensus 546 ~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G 625 (964)
..+.+.++.|+..+...+++.|++.|++++.+|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG 91 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 34567788888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----Hh
Q 002124 626 REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AK 701 (964)
Q Consensus 626 ~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~ 701 (964)
+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .+
T Consensus 92 ~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~l~~A~~~~~~~ 160 (169)
T 2y1l_E 92 HLEIVEVLLKNGADVNA------NDMEGHTPLHLAAMFGHLEIVEVLLKNG-----ADVNAQDKFGKTAFDISIDNGNED 160 (169)
T ss_dssp CHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHhCCHH
Confidence 99999999999999887 4579999999999999999999999999 889999999999999984 68
Q ss_pred HHHHHHHcc
Q 002124 702 AVQTVSEKT 710 (964)
Q Consensus 702 iv~~Lle~g 710 (964)
+++.|++.|
T Consensus 161 ~~~~L~~~G 169 (169)
T 2y1l_E 161 LAEILQKLN 169 (169)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHcC
Confidence 899988765
No 51
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.91 E-value=1e-24 Score=236.48 Aligned_cols=194 Identities=18% Similarity=0.089 Sum_probs=165.3
Q ss_pred cccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcccchhhhhhhhccCCC-CCcccCCCCCCccHHHH
Q 002124 410 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVK-DADISDIYGSSTSESFL 488 (964)
Q Consensus 410 ~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~~seVv~feyl~~~~a-~vn~~d~~g~~~t~Lhl 488 (964)
+..|+++..|+++.++.++..+....++..+..|+||||+||..|+ .++++ +++..++ +++..+..| .||||+
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~--~~~v~--~Ll~~g~~~~~~~~~~g--~tpL~~ 151 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHAN--FPVVQ--QLLDSGVCKVDKQNRAG--YSPIML 151 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTC--HHHHH--HHHHTSCCCTTCCCTTS--CCHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCcCCCCCCCC--CCHHHH
Confidence 3568999999999999998887665567789999999999999999 78887 5566666 788877776 788876
Q ss_pred HHHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHH
Q 002124 489 HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVC 568 (964)
Q Consensus 489 a~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll 568 (964)
++.. . +...+...+++.|+
T Consensus 152 a~~~-----------------------------------------------~--------------~~~~~~~~~v~~Ll 170 (276)
T 4hbd_A 152 TALA-----------------------------------------------T--------------LKTQDDIETVLQLF 170 (276)
T ss_dssp GGGC-----------------------------------------------C--------------CCSHHHHHHHHHHH
T ss_pred HHHH-----------------------------------------------H--------------hhhhhhHHHHHHHH
Confidence 4310 0 00112335678888
Q ss_pred HCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCC
Q 002124 569 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS-LGAAPGLLTDPS 647 (964)
Q Consensus 569 ~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~-~GAdvn~~~d~~ 647 (964)
+.|.+++..|..|+||||+||..|+.++|++|+++|+++|.+|..|+||||+|+..|+.++|++|++ .|++++.
T Consensus 171 ~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~----- 245 (276)
T 4hbd_A 171 RLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL----- 245 (276)
T ss_dssp HHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC-----
T ss_pred HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC-----
Confidence 8899999999999999999999999999999999999999999999999999999999999999999 8999988
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 648 PEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 648 ~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
+|..|+||||+|+..|+.+++++|++++
T Consensus 246 -~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 246 -TDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp -CCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred -cCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 5579999999999999999999999876
No 52
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.91 E-value=8.4e-24 Score=208.44 Aligned_cols=152 Identities=18% Similarity=0.180 Sum_probs=139.5
Q ss_pred hHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHH
Q 002124 549 QILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK 628 (964)
Q Consensus 549 ~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~e 628 (964)
.++++.+...+...+++.|++.|++++.+|..|+||||+|+. |+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 84 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLD 84 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 456677777788899999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC-CccCCCCCCcHHHHhh----HhHH
Q 002124 629 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLS-LKMNDSADDGALEDSI----AKAV 703 (964)
Q Consensus 629 iV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~lad-vn~~d~~G~tpl~~a~----~~iv 703 (964)
++++|+++|++++. +|..|+||||+|+..|+.+++++|+++| ++ ++.+|..|.||+++|. .+++
T Consensus 85 ~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~~g~t~l~~A~~~~~~~~~ 153 (162)
T 1ihb_A 85 TLQTLLEFQADVNI------EDNEGNLPLHLAAKEGHLRVVEFLVKHT-----ASNVGHRNHKGDTACDLARLYGRNEVV 153 (162)
T ss_dssp HHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHS-----CCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHcc-----CCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 99999999999887 4579999999999999999999999999 55 6889999999999985 6999
Q ss_pred HHHHHccCC
Q 002124 704 QTVSEKTAT 712 (964)
Q Consensus 704 ~~Lle~ga~ 712 (964)
+.|+++|++
T Consensus 154 ~~Ll~~GAd 162 (162)
T 1ihb_A 154 SLMQANGAG 162 (162)
T ss_dssp HHHHHTC--
T ss_pred HHHHHhCCC
Confidence 999999973
No 53
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.91 E-value=2.9e-23 Score=224.71 Aligned_cols=214 Identities=16% Similarity=0.042 Sum_probs=166.3
Q ss_pred CccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHH
Q 002124 506 LSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVL 585 (964)
Q Consensus 506 ~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpL 585 (964)
....+.++++.++..++. +.+..|+ .. +.+++..+..+.++++.|+..+...++++|++.|++++.+|..|+|||
T Consensus 36 ~~~~~~t~l~~A~~~g~~--~~v~~Ll-~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 110 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDT--EEVLRLL-ER--GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPL 110 (299)
T ss_dssp CEECHHHHHHHHHHHTCH--HHHHHHH-HH--CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cccCCccHHHHHHHcCCH--HHHHHHH-Hc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 345667778887776665 6777777 32 234555556677788888888888888888888888888888888888
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCC--------------------C
Q 002124 586 HLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS-LGAAPGLL--------------------T 644 (964)
Q Consensus 586 HlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~-~GAdvn~~--------------------~ 644 (964)
|+||..|+.++|++|+++|++++.+|..|.||||+|+..|+.++++.|+. .|++++.. .
T Consensus 111 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 88888888888888888888888888888888888888888888876664 23332210 0
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCCCCCCCcc
Q 002124 645 DPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDES 720 (964)
Q Consensus 645 d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~~~~d~~ 720 (964)
.....+..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+|+|. .++++.|++.|+++...
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~---- 261 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-----YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAV---- 261 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-----CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-----CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCc----
Confidence 01124578999999999999999999999999 899999999999999994 79999999999876642
Q ss_pred ccccccccchhhhhhhh
Q 002124 721 DVLSLKDSLTAICNATQ 737 (964)
Q Consensus 721 ~~l~Lkd~ltA~~~Aaq 737 (964)
.+.+.++++.|.+
T Consensus 262 ----d~~g~t~l~~A~~ 274 (299)
T 1s70_B 262 ----NKVGQTAFDVADE 274 (299)
T ss_dssp ----CTTSCCTTTSCCS
T ss_pred ----CCCCCCHHHHHHH
Confidence 3567788888765
No 54
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.91 E-value=3.4e-24 Score=227.75 Aligned_cols=158 Identities=14% Similarity=0.035 Sum_probs=142.1
Q ss_pred ccccchHHHHHHHHh---CHHHHHHHHHHCCCCCCcc-----------CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcc
Q 002124 544 HVEKYQILQKIMKEK---LYSWLLRKVCEDGKGPCIL-----------DDEGQGVLHLAASLGYDWAIKPTVTAGVSINF 609 (964)
Q Consensus 544 ~~~~~~~ll~~a~~~---~~~~lvk~Ll~~gad~n~~-----------D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~ 609 (964)
.+..+.++++.|... +...++++|++.|++++.. |..|+||||+||..|+.+++++|+++|++++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 456677888888877 8888899999988877633 47899999999999999999999999999999
Q ss_pred cCCC-------------CChHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCCCCCCCCHHHHHHH--cCCHH----
Q 002124 610 RDLS-------------GWTALHWAAYCGREKTVAVLLS---LGAAPGLLTDPSPEFPLSRTPSDLASS--NGHKG---- 667 (964)
Q Consensus 610 ~D~~-------------G~TPLH~Aa~~G~~eiV~~LL~---~GAdvn~~~d~~~~D~~G~TPLhlAa~--~G~~e---- 667 (964)
+|.. |+||||+|+..|+.+++++|++ +|++++. +|..|+||||+|+. .|+.+
T Consensus 119 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~------~d~~g~TpLh~A~~~~~~~~~~~~~ 192 (256)
T 2etb_A 119 RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA------TDSLGNTVLHALVMIADNSPENSAL 192 (256)
T ss_dssp CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------CCTTSCCHHHHHHHHCCSCHHHHHH
T ss_pred ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc------cCCCCCCHHHHHHHcccCCchhhHH
Confidence 9986 9999999999999999999999 9999988 55799999999999 88988
Q ss_pred ---HHHHHHHcCCCCcccCC-------ccCCCCCCcHHHHhh----HhHHHHHHHccCC
Q 002124 668 ---ISGFLAESSLTSLLLSL-------KMNDSADDGALEDSI----AKAVQTVSEKTAT 712 (964)
Q Consensus 668 ---iv~~LLe~G~~~~ladv-------n~~d~~G~tpl~~a~----~~iv~~Lle~ga~ 712 (964)
++++|+++| +++ +.+|..|.||+++|. .++++.|+++|+.
T Consensus 193 ~~~iv~~Ll~~g-----a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 193 VIHMYDGLLQMG-----ARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp HHHHHHHHHHHH-----HHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-----CCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 999999999 888 899999999999985 6999999998863
No 55
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.91 E-value=7e-24 Score=215.80 Aligned_cols=155 Identities=20% Similarity=0.110 Sum_probs=145.2
Q ss_pred cccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHc
Q 002124 545 VEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYC 624 (964)
Q Consensus 545 ~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~ 624 (964)
+..+.++++.++..+...+++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 111 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIF 111 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 45567888888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----H
Q 002124 625 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----A 700 (964)
Q Consensus 625 G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~ 700 (964)
|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .
T Consensus 112 ~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 112 GYSEMSYFLLEHGANVND------RNLEGETPLIVASKYGRSEIVKKLLELG-----ADISARDLTGLTAEASARIFGRQ 180 (192)
T ss_dssp TCHHHHHHHHHTTCCSSC------CCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCBCTTSCBHHHHHHHTTCH
T ss_pred CCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHHHHHhCcH
Confidence 999999999999999887 4579999999999999999999999999 899999999999999984 6
Q ss_pred hHHHHHHHcc
Q 002124 701 KAVQTVSEKT 710 (964)
Q Consensus 701 ~iv~~Lle~g 710 (964)
+++++|++.+
T Consensus 181 ~~v~~Ll~~~ 190 (192)
T 2rfm_A 181 EVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcc
Confidence 8999999876
No 56
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.90 E-value=2.7e-24 Score=231.04 Aligned_cols=159 Identities=13% Similarity=-0.006 Sum_probs=138.7
Q ss_pred cccchHHHHHHHHh---CHHHHHHHHHHCCCCC-------C----ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCccc
Q 002124 545 VEKYQILQKIMKEK---LYSWLLRKVCEDGKGP-------C----ILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFR 610 (964)
Q Consensus 545 ~~~~~~ll~~a~~~---~~~~lvk~Ll~~gad~-------n----~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~ 610 (964)
+..+.++++.++.. +...++++|++.|+++ + ..|..|+||||+||..|+.++|++|+++|++++.+
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~ 130 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA 130 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc
Confidence 45567777777764 7788899999887653 2 25678999999999999999999999999999999
Q ss_pred CC--------------CCChHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCCCCCCCCHHHHHHHcCC--------
Q 002124 611 DL--------------SGWTALHWAAYCGREKTVAVLLS---LGAAPGLLTDPSPEFPLSRTPSDLASSNGH-------- 665 (964)
Q Consensus 611 D~--------------~G~TPLH~Aa~~G~~eiV~~LL~---~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~-------- 665 (964)
+. .|+||||+|+..|+.++|++|++ +|++++. +|..|+||||+|+..|+
T Consensus 131 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~------~d~~g~tpLh~A~~~~~~~~~~~~~ 204 (273)
T 2pnn_A 131 ANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA------RDSVGNTVLHALVEVADNTVDNTKF 204 (273)
T ss_dssp BCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------CCTTSCCHHHHHHHHCCSCHHHHHH
T ss_pred ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee------eCCCCCcHHHHHHHccCcchhHHHH
Confidence 97 79999999999999999999999 9999987 55799999999999998
Q ss_pred -HHHHHHHHHcCCCCcccCCc-------cCCCCCCcHHHHhh----HhHHHHHHHccC-CCC
Q 002124 666 -KGISGFLAESSLTSLLLSLK-------MNDSADDGALEDSI----AKAVQTVSEKTA-TPA 714 (964)
Q Consensus 666 -~eiv~~LLe~G~~~~ladvn-------~~d~~G~tpl~~a~----~~iv~~Lle~ga-~~~ 714 (964)
.+++++|+++| ++++ .+|..|.||+++|. .+++++|+++|+ +|.
T Consensus 205 ~~~~v~~Ll~~g-----a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~ 261 (273)
T 2pnn_A 205 VTSMYNEILILG-----AKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPE 261 (273)
T ss_dssp HHHHHHHHHHHH-----HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHhh-----hhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCch
Confidence 89999999999 7775 58999999999984 799999999998 444
No 57
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.90 E-value=1.9e-23 Score=207.45 Aligned_cols=154 Identities=17% Similarity=0.074 Sum_probs=143.3
Q ss_pred chHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCH
Q 002124 548 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE 627 (964)
Q Consensus 548 ~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~ 627 (964)
+.++++.+...+...+++.|++.|.+++.+|..|.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT 82 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 45667788888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHH
Q 002124 628 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAV 703 (964)
Q Consensus 628 eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv 703 (964)
+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .+++
T Consensus 83 ~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 83 DIVKMLLDCGVDVNE------YDWNGGTPLLYAVHGNHVKCVKMLLESG-----ADPTIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp HHHHHHHHHTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHHCCCCCCc------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 999999999999987 4579999999999999999999999999 889999999999999985 6899
Q ss_pred HHHHHccCC
Q 002124 704 QTVSEKTAT 712 (964)
Q Consensus 704 ~~Lle~ga~ 712 (964)
+.|+++++.
T Consensus 152 ~~L~~~~~~ 160 (167)
T 3v31_A 152 QVIESHLLK 160 (167)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988753
No 58
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.90 E-value=2.3e-23 Score=206.55 Aligned_cols=155 Identities=15% Similarity=0.144 Sum_probs=139.6
Q ss_pred ccchHHHHHHHHhCHHHHHHHHHH-CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHc
Q 002124 546 EKYQILQKIMKEKLYSWLLRKVCE-DGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYC 624 (964)
Q Consensus 546 ~~~~~ll~~a~~~~~~~lvk~Ll~-~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~ 624 (964)
..+.++++.+...+...+++.|++ .+.+++..+..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSY 85 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHc
Confidence 345667777777777788888887 5678888899999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh---Hh
Q 002124 625 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI---AK 701 (964)
Q Consensus 625 G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~---~~ 701 (964)
|+.+++++|+++|++++. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||++++. .+
T Consensus 86 ~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~a~~~~~~ 154 (165)
T 3twr_A 86 GHYEVAELLVKHGAVVNV------ADLWKFTPLHEAAAKGKYEICKLLLQHG-----ADPTKKNRDGNTPLDLVKDGDTD 154 (165)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCTGGGSCTTCHH
T ss_pred CcHHHHHHHHhCCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCcccCCCCCChhHhHhcCChH
Confidence 999999999999999987 4579999999999999999999999999 899999999999999984 68
Q ss_pred HHHHHHHccC
Q 002124 702 AVQTVSEKTA 711 (964)
Q Consensus 702 iv~~Lle~ga 711 (964)
++++|+++|+
T Consensus 155 i~~~L~~~gA 164 (165)
T 3twr_A 155 IQDLLRGDAA 164 (165)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHhhccc
Confidence 9999998875
No 59
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.90 E-value=6.8e-23 Score=206.40 Aligned_cols=154 Identities=16% Similarity=0.089 Sum_probs=140.9
Q ss_pred HHHHHHHhCHHHHHHHHHHC-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHH
Q 002124 551 LQKIMKEKLYSWLLRKVCED-GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT 629 (964)
Q Consensus 551 ll~~a~~~~~~~lvk~Ll~~-gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~ei 629 (964)
.++.++..+...+++.|++. +.+++.+|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.++
T Consensus 8 ~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 87 (179)
T 3f6q_A 8 DIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDI 87 (179)
T ss_dssp CHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 34556666666778888877 67899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHH
Q 002124 630 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQT 705 (964)
Q Consensus 630 V~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~ 705 (964)
+++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. ..+++.
T Consensus 88 v~~Ll~~g~~~~~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~A~~~~~~~~~~~ 156 (179)
T 3f6q_A 88 VQKLLQYKADINA------VNEHGNVPLHYACFWGQDQVAEDLVANG-----ALVSICNKYGEMPVDKAKAPLRELLRER 156 (179)
T ss_dssp HHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCSSBCCTTSCCGGGGSCHHHHHHHHHH
T ss_pred HHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCcchhccCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999987 4579999999999999999999999999 899999999999999884 688999
Q ss_pred HHHccCCCCC
Q 002124 706 VSEKTATPAN 715 (964)
Q Consensus 706 Lle~ga~~~~ 715 (964)
|++.|+.++.
T Consensus 157 L~~~g~~~~~ 166 (179)
T 3f6q_A 157 AEKMGQNLNR 166 (179)
T ss_dssp HHHTTCCCSC
T ss_pred HHHhhcCccc
Confidence 9999997765
No 60
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.90 E-value=3.4e-23 Score=206.69 Aligned_cols=155 Identities=15% Similarity=0.054 Sum_probs=132.6
Q ss_pred HHHHHHHHhCHHHHHHHHHHCCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHH
Q 002124 550 ILQKIMKEKLYSWLLRKVCEDGKG-PCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK 628 (964)
Q Consensus 550 ~ll~~a~~~~~~~lvk~Ll~~gad-~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~e 628 (964)
++++.+...+...+++.|++.+.+ ++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTD 83 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHH
Confidence 445666667777788888888776 7888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHH
Q 002124 629 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQ 704 (964)
Q Consensus 629 iV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~ 704 (964)
++++|+++|++++. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .++++
T Consensus 84 ~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 84 IVGLLLERDVDINI------YDWNGGTPLLYAVRGNHVKCVEALLARG-----ADLTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp HHHHHHTTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHHHHHhCcHHHHH
Confidence 99999999998877 4568999999999999999999999988 888888988999998884 68889
Q ss_pred HHHHccCCCCC
Q 002124 705 TVSEKTATPAN 715 (964)
Q Consensus 705 ~Lle~ga~~~~ 715 (964)
.|+++++....
T Consensus 153 ~L~~~~~~~~~ 163 (172)
T 3v30_A 153 VIENHILKLFQ 163 (172)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHHhc
Confidence 99988875443
No 61
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.89 E-value=1.8e-22 Score=198.03 Aligned_cols=145 Identities=24% Similarity=0.169 Sum_probs=131.3
Q ss_pred HHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHH
Q 002124 550 ILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT 629 (964)
Q Consensus 550 ~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~ei 629 (964)
++++.+...+...+++.|++.|.+++ .|..|.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.++
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 82 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANI 82 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHH
Confidence 45666777778888999999999887 58899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHH
Q 002124 630 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQT 705 (964)
Q Consensus 630 V~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~ 705 (964)
+++|+++|++++. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .+++++
T Consensus 83 v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 83 VEVLLKHGADVNA------KDMLKMTALHWATEHNHQEVVELLIKYG-----ADVHTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp HHHHHTTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 9999999999887 4579999999999999999999999999 889999999999999985 455554
Q ss_pred H
Q 002124 706 V 706 (964)
Q Consensus 706 L 706 (964)
|
T Consensus 152 L 152 (153)
T 1awc_B 152 L 152 (153)
T ss_dssp H
T ss_pred h
Confidence 4
No 62
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.89 E-value=7e-23 Score=204.41 Aligned_cols=168 Identities=22% Similarity=0.174 Sum_probs=138.8
Q ss_pred cHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHc
Q 002124 512 EKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASL 591 (964)
Q Consensus 512 ~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~ 591 (964)
++++.++..+.. +.+..++ .. ....++..+..+.++++.+...+...++++|++.|++++.+|..|.||||+|+..
T Consensus 4 ~~L~~A~~~g~~--~~v~~ll-~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 4 LSIHQLAAQGEL--DQLKEHL-RK-GDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTG 79 (172)
T ss_dssp CCHHHHHHTTCH--HHHHHHH-TT-CSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred hhHHHHHHcCCH--HHHHHHH-Hc-CcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHC
Confidence 445555444444 5566666 22 1222444556778888999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Q 002124 592 GYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGF 671 (964)
Q Consensus 592 G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~ 671 (964)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++
T Consensus 80 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~~~~~ 153 (172)
T 3v30_A 80 GYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT------EADSGYTPMDLAVALGYRKVQQV 153 (172)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCCHHHHHHHhCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999887 45799999999999999999999
Q ss_pred HHHcCCCCcccCCccCCCCCCcH
Q 002124 672 LAESSLTSLLLSLKMNDSADDGA 694 (964)
Q Consensus 672 LLe~G~~~~ladvn~~d~~G~tp 694 (964)
|+++| +++..++..|.||
T Consensus 154 L~~~~-----~~~~~~~~~~~~p 171 (172)
T 3v30_A 154 IENHI-----LKLFQSNLVPADP 171 (172)
T ss_dssp HHHHH-----HHHSCC-------
T ss_pred HHHHH-----HHHhcccCCCCCC
Confidence 99999 7787788777776
No 63
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.89 E-value=5.5e-23 Score=218.64 Aligned_cols=158 Identities=13% Similarity=-0.001 Sum_probs=138.3
Q ss_pred ccchHHHHHHH---HhCHHHHHHHHHHCCCC-----------CCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccC
Q 002124 546 EKYQILQKIMK---EKLYSWLLRKVCEDGKG-----------PCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD 611 (964)
Q Consensus 546 ~~~~~ll~~a~---~~~~~~lvk~Ll~~gad-----------~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D 611 (964)
..+.++++.|. ..+...++++|++.|++ ++..|..|+||||+||..|+.++|++|+++|++++.+|
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 123 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQA 123 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccc
Confidence 44667777776 56777888888887743 44456689999999999999999999999999999998
Q ss_pred --------------CCCChHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCCCCCCCCHHHHHHHcCC---------
Q 002124 612 --------------LSGWTALHWAAYCGREKTVAVLLS---LGAAPGLLTDPSPEFPLSRTPSDLASSNGH--------- 665 (964)
Q Consensus 612 --------------~~G~TPLH~Aa~~G~~eiV~~LL~---~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~--------- 665 (964)
..|+||||+|+..|+.++|++|++ +|++++. +|..|+||||+|+..|+
T Consensus 124 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~------~d~~g~TpLh~A~~~~~~~~~~~~~~ 197 (260)
T 3jxi_A 124 RGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR------QDSRGNTVLHALVAIADNTRENTKFV 197 (260)
T ss_dssp EECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------CCTTSCCHHHHHHHHCCSSHHHHHHH
T ss_pred cccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc------cCCCCCcHHHHHHHhccCchhHHHHH
Confidence 689999999999999999999999 9999987 55799999999999888
Q ss_pred HHHHHHHHHcCCCCcccCC-------ccCCCCCCcHHHHhh----HhHHHHHHHccCCCC
Q 002124 666 KGISGFLAESSLTSLLLSL-------KMNDSADDGALEDSI----AKAVQTVSEKTATPA 714 (964)
Q Consensus 666 ~eiv~~LLe~G~~~~ladv-------n~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~ 714 (964)
.+++++|+++| +++ +.+|..|.||+++|. .++++.|+++|+.+.
T Consensus 198 ~~~v~~Ll~~g-----a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 198 TKMYDLLLIKC-----AKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHHH-----HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-----cccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 79999999999 777 789999999999995 799999999987443
No 64
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.89 E-value=1.3e-23 Score=233.35 Aligned_cols=238 Identities=11% Similarity=-0.034 Sum_probs=138.2
Q ss_pred CCCCCeEEEEecccccccccccccchhhhcCChHHHHHHHHcCCCCCCCCC-----------CC-CCC---cceeecccC
Q 002124 389 YTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPP-----------HA-VGR---VPFYITCSN 453 (964)
Q Consensus 389 ~~~ggtKVlI~G~~~~~~~~~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~-----------~~-~G~---TPLhvA~~n 453 (964)
..+.|..|....... .++..|++++++.|++.|++....+. +. .+. ..+|+|+.+
T Consensus 38 ll~~ga~i~~~~~~g----------~~~~~g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~ 107 (327)
T 1sw6_A 38 FLSSPLKIMKALPSP----------VVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDS 107 (327)
T ss_dssp TTTSSCCCEECBCCC----------CCCCHHHHHHHHHHHHHHHC-------------------------------CHHH
T ss_pred HhhCCcccccCCCCC----------CcccCchhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHh
Confidence 556666666654333 33445999999999999987211000 00 111 112444444
Q ss_pred CcccchhhhhhhhccCCCCCcc-cCCCCCCccHHHHH-----HHHHHHHhhCCCCCCCCccccccHHHHHHHHhhhhhhh
Q 002124 454 RLACSEVREFDYIVGSVKDADI-SDIYGSSTSESFLH-----LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEE 527 (964)
Q Consensus 454 g~~~seVv~feyl~~~~a~vn~-~d~~g~~~t~Lhla-----~rlvkLLl~~~~~~~~~~~~g~~~l~la~~i~~ll~~~ 527 (964)
+. .++++ ++...++++|. .|.+| +||||+| .+++++|+..+++.+..+..|.+++|++
T Consensus 108 ~~--~~~~~--~l~~~g~dvn~~~d~~g--~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A---------- 171 (327)
T 1sw6_A 108 LL--QEVND--AFPNTQLNLNIPVDEHG--NTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKA---------- 171 (327)
T ss_dssp HH--HHHHH--HCTTSCCCSCSCCSTTC--CCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHH----------
T ss_pred hH--HHHHH--HHHhcCCCcccccCCCC--CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH----------
Confidence 44 44444 44555666666 55555 6777766 3555666655555555555555555555
Q ss_pred HHHHhhhcCCCCCCccccccchHHHHHHHHhCH---HHHHHHHHHCC-CCCCccCCCCCcHHHHHHH----cCCHHHHHH
Q 002124 528 ESYQMVEANPEKNLSQHVEKYQILQKIMKEKLY---SWLLRKVCEDG-KGPCILDDEGQGVLHLAAS----LGYDWAIKP 599 (964)
Q Consensus 528 ~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~---~~lvk~Ll~~g-ad~n~~D~~G~TpLHlAa~----~G~~~iVk~ 599 (964)
...++ ..+++.|++.+ ++++.+|..|+||||+||. .|+.+++++
T Consensus 172 ----------------------------~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~ 223 (327)
T 1sw6_A 172 ----------------------------VKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKY 223 (327)
T ss_dssp ----------------------------HHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHH
T ss_pred ----------------------------HHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHH
Confidence 33333 22233333333 4577777888888888887 778888888
Q ss_pred HHhC--------------------CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH
Q 002124 600 TVTA--------------------GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDL 659 (964)
Q Consensus 600 LL~~--------------------Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhl 659 (964)
|++. |++++.+|..|+||||+|+. +++|+++ +++. +|..|+||||+
T Consensus 224 Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~------~d~~G~TpLh~ 289 (327)
T 1sw6_A 224 YLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--MLNA------QDSNGDTCLNI 289 (327)
T ss_dssp HHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--TTTC------CCTTSCCHHHH
T ss_pred HHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CCCC------CCCCCCCHHHH
Confidence 7765 77788888888888888774 7777777 3444 45678888888
Q ss_pred HHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh
Q 002124 660 ASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI 699 (964)
Q Consensus 660 Aa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~ 699 (964)
|+..|+.+++++|+++|+..+. +|..|.||+++|.
T Consensus 290 A~~~g~~~~v~~Ll~~Gad~~~-----~d~~G~TpL~~A~ 324 (327)
T 1sw6_A 290 AARLGNISIVDALLDYGADPFI-----ANKSGLRPVDFGA 324 (327)
T ss_dssp HHHHCCHHHHHHHHHTTCCTTC-----CCTTSCCGGGGTC
T ss_pred HHHcCCHHHHHHHHHcCCCCcc-----cCCCCCCHHHHHH
Confidence 8888888888888888877777 4556778887764
No 65
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=1.6e-22 Score=194.91 Aligned_cols=129 Identities=19% Similarity=0.176 Sum_probs=109.0
Q ss_pred CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 002124 571 GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEF 650 (964)
Q Consensus 571 gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D 650 (964)
+++++..|..|.||||+||..|+.+++++|++.|++++.+|..|+||||+|+. |+.+++++|+++|++++.. |
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~------~ 74 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCA------D 74 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCC------B
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCc------C
Confidence 56788888888888888888888888888888888888888888888888888 8888888888888888774 4
Q ss_pred CC-CCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccC
Q 002124 651 PL-SRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTA 711 (964)
Q Consensus 651 ~~-G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga 711 (964)
.. |+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .++++.|+++|+
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 75 PATLTRPVHDAAREGFLDTLVVLHRAG-----ARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTC-----CCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 57 888888888888888888888888 788888888888888874 688888888876
No 66
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.88 E-value=3.7e-22 Score=202.98 Aligned_cols=142 Identities=20% Similarity=0.116 Sum_probs=127.3
Q ss_pred hhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 002124 526 EEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGV 605 (964)
Q Consensus 526 ~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Ga 605 (964)
+.+..++.. ..+++..+..+.++++.+...+...++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 49 ~~v~~Ll~~---~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 125 (192)
T 2rfm_A 49 NAIDKLVEN---FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGA 125 (192)
T ss_dssp GGHHHHHHH---HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHh---ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 555666622 23344445667888888989999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 606 SINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 606 dvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
+++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++.|
T Consensus 126 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 126 NVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA------RDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999999999999999999887 4579999999999999999999999876
No 67
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.88 E-value=1.2e-22 Score=220.18 Aligned_cols=159 Identities=18% Similarity=0.124 Sum_probs=146.8
Q ss_pred CccccccchHHHHHHHHhCHHHHHHHHHHCCC-CCCccCCCCCcHHHHHH-----HcCCHHHHHHHHhCCCCCcccCCCC
Q 002124 541 LSQHVEKYQILQKIMKEKLYSWLLRKVCEDGK-GPCILDDEGQGVLHLAA-----SLGYDWAIKPTVTAGVSINFRDLSG 614 (964)
Q Consensus 541 is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~ga-d~n~~D~~G~TpLHlAa-----~~G~~~iVk~LL~~Gadvn~~D~~G 614 (964)
++..+..+.++++.++..+...++++|++.|+ +++..|..|.||||+|+ ..++.++++.|++.|++++..|..|
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 34445667889999999999999999999998 99999999999999999 6688999999999999999999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcccCCccCCCCCCc
Q 002124 615 WTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE-SSLTSLLLSLKMNDSADDG 693 (964)
Q Consensus 615 ~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe-~G~~~~ladvn~~d~~G~t 693 (964)
+||||+|+..|+.++|++|+++|++++. +|..|+||||+|+..|+.+++++|++ .| ++++.+|..|.|
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~------~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g-----ad~~~~d~~g~T 252 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNV------QDDDGSTALMCACEHGHKEIAGLLLAVPS-----CDISLTDRDGST 252 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHTSTT-----CCTTCCCTTSCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHhcCC-----CCCcCcCCCCCC
Confidence 9999999999999999999999999988 55799999999999999999999999 78 899999999999
Q ss_pred HHHHhh----HhHHHHHHHcc
Q 002124 694 ALEDSI----AKAVQTVSEKT 710 (964)
Q Consensus 694 pl~~a~----~~iv~~Lle~g 710 (964)
|+++|. .+++++|+++.
T Consensus 253 pL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 253 ALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHhcc
Confidence 999985 68999999876
No 68
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.88 E-value=4.9e-22 Score=195.75 Aligned_cols=154 Identities=21% Similarity=0.213 Sum_probs=132.6
Q ss_pred ccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHH
Q 002124 511 CEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS 590 (964)
Q Consensus 511 ~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~ 590 (964)
.++++.++..+.. +.++.++ . .+.+++..+..+.++++++.. +...++++|++.|++++.+|..|+||||+|+.
T Consensus 6 ~~~L~~A~~~g~~--~~v~~Ll-~--~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 6 GNELASAAARGDL--EQLTSLL-Q--NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAAR 79 (162)
T ss_dssp HHHHHHHHHHTCH--HHHHHHT-T--SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred hhHHHHHHHcCCH--HHHHHHH-h--CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 3455555555544 6666666 2 234455555667777787777 88899999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 002124 591 LGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP-GLLTDPSPEFPLSRTPSDLASSNGHKGIS 669 (964)
Q Consensus 591 ~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdv-n~~~d~~~~D~~G~TPLhlAa~~G~~eiv 669 (964)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++. +. +|..|.||||+|+..|+.+++
T Consensus 80 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~~g~t~l~~A~~~~~~~~~ 153 (162)
T 1ihb_A 80 AGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGH------RNHKGDTACDLARLYGRNEVV 153 (162)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC------CCTTSCCHHHHHHHTTCHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCC------cCCCCCcHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999999999999999999999984 55 567999999999999999999
Q ss_pred HHHHHcC
Q 002124 670 GFLAESS 676 (964)
Q Consensus 670 ~~LLe~G 676 (964)
++|+++|
T Consensus 154 ~~Ll~~G 160 (162)
T 1ihb_A 154 SLMQANG 160 (162)
T ss_dssp HHHHHTC
T ss_pred HHHHHhC
Confidence 9999999
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.88 E-value=8.5e-22 Score=193.10 Aligned_cols=148 Identities=23% Similarity=0.204 Sum_probs=126.8
Q ss_pred hHHHHHHHHhCHHHHHHHHHHC-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCH
Q 002124 549 QILQKIMKEKLYSWLLRKVCED-GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE 627 (964)
Q Consensus 549 ~~ll~~a~~~~~~~lvk~Ll~~-gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~ 627 (964)
.++++.+...+...+++.|++. +.+++..|..|+||||+ |..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 81 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFL 81 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 4556666677777778888877 45888899999999999 889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHH
Q 002124 628 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAV 703 (964)
Q Consensus 628 eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv 703 (964)
+++++|+++|++++. +|..|+||||+|+..|+.+++++|++. ++++.+|..|.||+++|. .+++
T Consensus 82 ~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~------~~~~~~~~~g~t~l~~A~~~~~~~~v 149 (156)
T 1bd8_A 82 DTLKVLVEHGADVNV------PDGTGALPIHLAVQEGHTAVVSFLAAE------SDLHRRDARGLTPLELALQRGAQDLV 149 (156)
T ss_dssp HHHHHHHHTTCCSCC------CCTTSCCHHHHHHHHTCHHHHHHHHTT------SCTTCCCTTSCCHHHHHHHSCCHHHH
T ss_pred HHHHHHHHcCCCCCC------cCCCCCcHHHHHHHhChHHHHHHHHhc------cCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 999999999998877 456899999999999999999999975 577888889999999884 6788
Q ss_pred HHHHHc
Q 002124 704 QTVSEK 709 (964)
Q Consensus 704 ~~Lle~ 709 (964)
+.|+++
T Consensus 150 ~~Ll~~ 155 (156)
T 1bd8_A 150 DILQGH 155 (156)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 888764
No 70
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.87 E-value=1.1e-23 Score=222.63 Aligned_cols=180 Identities=20% Similarity=0.117 Sum_probs=153.0
Q ss_pred ccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHH
Q 002124 542 SQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWA 621 (964)
Q Consensus 542 s~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~A 621 (964)
+..+..+.++++.++..+...+++.|++.|++++.+|..|+||||+||..|+.+++++|++.|+++|.+|..|+||||+|
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A 94 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCA 94 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 33445567888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHh-
Q 002124 622 AYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA--SSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDS- 698 (964)
Q Consensus 622 a~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlA--a~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a- 698 (964)
+..|+.+++++|+++|++++..+ +..|+||||+| +..|+.+++++|+++| ++++.+|..|.+|++.+
T Consensus 95 ~~~g~~~~v~~Ll~~ga~~~~~~-----~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g-----a~~~~~~~~~~~~l~~~~ 164 (229)
T 2vge_A 95 ASCNDTVICMALVQHGAAIFATT-----LSDGATAFEKCDPYREGYADCATYLADVE-----QSMGLMNSGAVYALWDYS 164 (229)
T ss_dssp HHTTCHHHHHHHHTTTCCTTCCC-----SSTTCCTGGGCCTTSTTHHHHHHHHHHHH-----HHTTTSGGGEEEESSCBC
T ss_pred HHcCCHHHHHHHHHcCCCccccc-----CCCCCCHHHHHHHHhcChHHHHHHHHHcC-----CCcccccCCchHHHHHHh
Confidence 99999999999999999998853 26999999999 9999999999999999 89999999888888744
Q ss_pred hHhHHHHHHHccCCCCCCCCccccccccccchhhhhhhh
Q 002124 699 IAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQ 737 (964)
Q Consensus 699 ~~~iv~~Lle~ga~~~~~~d~~~~l~Lkd~ltA~~~Aaq 737 (964)
....++.|++.|+... .......+.|+++.|+.
T Consensus 165 ~~~~~~~ll~~ga~~~------~~~~d~~G~TpL~~A~~ 197 (229)
T 2vge_A 165 AEFGDELSFREGESVT------VLRRDGPEETDWWWAAL 197 (229)
T ss_dssp CSSTTBCCBCTTCEEE------EEESSCTTCSSEEEEEE
T ss_pred hccccccCcccccccc------ccccCCCcccHHHHHHH
Confidence 3444556666655311 12234557788887765
No 71
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=1.2e-22 Score=200.52 Aligned_cols=139 Identities=22% Similarity=0.211 Sum_probs=115.7
Q ss_pred ccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCh-HHHHHHHc
Q 002124 546 EKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWT-ALHWAAYC 624 (964)
Q Consensus 546 ~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~T-PLH~Aa~~ 624 (964)
..+.++++.+...+...++++|++.|++++.+|..|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|+..
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~ 88 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAARE 88 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHH
T ss_pred ccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHC
Confidence 44567888888888889999999999999999999999999986 89999999999999999999999999 99999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHH
Q 002124 625 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALE 696 (964)
Q Consensus 625 G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~ 696 (964)
|+.+++++|+++|++++. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||.+
T Consensus 89 ~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 89 GFLDTLVVLHRAGARLDV------RDAWGRLPVDLAEELGHRDVARYLRAAA-----GGTRGSNHARIDAAE 149 (156)
T ss_dssp TCHHHHHHHHHHTCCSSC------CCTTCCCHHHHHHHHTCHHHHHHHSSCC--------------------
T ss_pred CCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHhCHHHHHHHHHHcC-----CCCCccCcCcCcccc
Confidence 999999999999999987 4579999999999999999999999999 899999999998876
No 72
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.87 E-value=1.5e-21 Score=194.94 Aligned_cols=156 Identities=21% Similarity=0.218 Sum_probs=134.4
Q ss_pred cccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHH
Q 002124 510 LCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAA 589 (964)
Q Consensus 510 g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa 589 (964)
+.++++.|+..+.. +.++.|+ .. +.+++..+..+.++++.++..+...++++|++.|++++..|..|.||||+||
T Consensus 14 ~~~~l~~A~~~g~~--~~v~~Ll-~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 14 LGKKLLEAARAGRD--DEVRILM-AN--GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp HHHHHHHHHHHTCH--HHHHHHH-HT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccchHHHHHHcCCH--HHHHHHH-HC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 34455555555544 6667776 32 3444555566778888888888899999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 002124 590 SLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGIS 669 (964)
Q Consensus 590 ~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv 669 (964)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA------QDKFGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999999999887 557999999999999999999
Q ss_pred HHHHHcC
Q 002124 670 GFLAESS 676 (964)
Q Consensus 670 ~~LLe~G 676 (964)
++|++.|
T Consensus 163 ~~L~~~G 169 (169)
T 2y1l_E 163 EILQKLN 169 (169)
T ss_dssp HHHHTC-
T ss_pred HHHHHcC
Confidence 9999876
No 73
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.87 E-value=9e-23 Score=215.98 Aligned_cols=121 Identities=29% Similarity=0.299 Sum_probs=81.3
Q ss_pred HHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHH
Q 002124 550 ILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT 629 (964)
Q Consensus 550 ~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~ei 629 (964)
++++.++..+...+++.|++.|+++|.+|..|+||||+||..|+.+++++|+++|+++|.+|..|+||||+||..|+.++
T Consensus 39 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~ 118 (239)
T 1ycs_B 39 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV 118 (239)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 33444444445556666666677777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCC-CHHHHH--HHcCCHHHHHHHHHcC
Q 002124 630 VAVLLSLGAAPGLLTDPSPEFPLSR-TPSDLA--SSNGHKGISGFLAESS 676 (964)
Q Consensus 630 V~~LL~~GAdvn~~~d~~~~D~~G~-TPLhlA--a~~G~~eiv~~LLe~G 676 (964)
|++|+++|++++..+ ..|. ||||+| +..|+.+++++|+++|
T Consensus 119 v~~Ll~~ga~~~~~~------~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~ 162 (239)
T 1ycs_B 119 CKFLVESGAAVFAMT------YSDMQTAADKCEEMEEGYTQCSQFLYGVQ 162 (239)
T ss_dssp HHHHHHTTCCTTCCC------SSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred HHHHHHcCCCcceec------CCCCcchHHHHHHhhhccHHHHHHHHHhh
Confidence 777777777766633 3444 777777 5667777777777766
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.87 E-value=7.2e-22 Score=198.89 Aligned_cols=167 Identities=17% Similarity=0.116 Sum_probs=142.5
Q ss_pred cccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHH
Q 002124 510 LCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAA 589 (964)
Q Consensus 510 g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa 589 (964)
+.++++.++..++. +.+..++ . ....+++..+..+.++++.++..+...++++|++.|++++.+|..|+||||+||
T Consensus 5 ~~~~l~~A~~~g~~--~~v~~ll-~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 5 FMDDIFTQCREGNA--VAVRLWL-D-NTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp --CCHHHHHHHTCH--HHHHHHH-H-CTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHcCCH--HHHHHHH-h-cCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 34556666555554 6667776 2 223345555667788899999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 002124 590 SLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGIS 669 (964)
Q Consensus 590 ~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv 669 (964)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..++.+++
T Consensus 81 ~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI------CNKYGEMPVDKAKAPLRELLR 154 (179)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB------CCTTSCCGGGGSCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch------hccCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987 557999999999999999999
Q ss_pred HHHHHcCCCCcccCCccCCCCC
Q 002124 670 GFLAESSLTSLLLSLKMNDSAD 691 (964)
Q Consensus 670 ~~LLe~G~~~~ladvn~~d~~G 691 (964)
++|++.| ++++..+..+
T Consensus 155 ~~L~~~g-----~~~~~~~~~~ 171 (179)
T 3f6q_A 155 ERAEKMG-----QNLNRIPYKD 171 (179)
T ss_dssp HHHHHTT-----CCCSCBCCCC
T ss_pred HHHHHhh-----cCcccCCccc
Confidence 9999999 6776655543
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.87 E-value=2.2e-22 Score=212.96 Aligned_cols=157 Identities=17% Similarity=0.039 Sum_probs=116.6
Q ss_pred cchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCC
Q 002124 547 KYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGR 626 (964)
Q Consensus 547 ~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~ 626 (964)
.+.++++.+...+...+++.|+++|++++.. ..|.||||+||..|+.++|++|++.|+++|.+|..|+||||+||..|+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~ 82 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGH 82 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTC
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4678888888889999999999999999854 789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCC-cHHHHh--h----
Q 002124 627 EKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADD-GALEDS--I---- 699 (964)
Q Consensus 627 ~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~-tpl~~a--~---- 699 (964)
.++|++|+++|++++. +|..|+||||+|+..|+.+++++|+++| ++++.++..|. ||++++ .
T Consensus 83 ~~~v~~Ll~~ga~~~~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~~~~t~l~~a~~~~~g~ 151 (239)
T 1ycs_B 83 TEIVKFLVQFGVNVNA------ADSDGWTPLHCAASCNNVQVCKFLVESG-----AAVFAMTYSDMQTAADKCEEMEEGY 151 (239)
T ss_dssp HHHHHHHHHHTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCSSSCCCHHHHCCSSSTTC
T ss_pred HHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCcceecCCCCcchHHHHHHhhhcc
Confidence 9999999999999988 4579999999999999999999999999 89999998887 999998 2
Q ss_pred HhHHHHHHHccCCCCC
Q 002124 700 AKAVQTVSEKTATPAN 715 (964)
Q Consensus 700 ~~iv~~Lle~ga~~~~ 715 (964)
.+++++|++.++....
T Consensus 152 ~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 152 TQCSQFLYGVQEKMGI 167 (239)
T ss_dssp CCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhcccc
Confidence 6899999999986654
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.87 E-value=1.8e-21 Score=190.81 Aligned_cols=153 Identities=17% Similarity=0.133 Sum_probs=133.2
Q ss_pred ccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHH
Q 002124 511 CEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS 590 (964)
Q Consensus 511 ~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~ 590 (964)
.++++.++..+.. +.+..++ .. ...+++..+..+.++++. +..+...+++.|++.|++++.+|..|.||||+||.
T Consensus 3 ~~~L~~A~~~g~~--~~v~~ll-~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 77 (156)
T 1bd8_A 3 GDRLSGAAARGDV--QEVRRLL-HR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHHHHHTCH--HHHHHHH-HT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred chHHHHHHHhCCH--HHHHHHH-Hh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 4566666666655 6777777 33 334555556677888888 77888899999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q 002124 591 LGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISG 670 (964)
Q Consensus 591 ~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~ 670 (964)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++. +|..|.||||+|+..|+.++++
T Consensus 78 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~------~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 78 TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR------RDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC------CCTTSCCHHHHHHHSCCHHHHH
T ss_pred cCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC------cCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999999999999999999999999999999999999999998 88776 5679999999999999999999
Q ss_pred HHHHc
Q 002124 671 FLAES 675 (964)
Q Consensus 671 ~LLe~ 675 (964)
+|+++
T Consensus 151 ~Ll~~ 155 (156)
T 1bd8_A 151 ILQGH 155 (156)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99864
No 77
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.86 E-value=4.5e-22 Score=191.86 Aligned_cols=131 Identities=21% Similarity=0.192 Sum_probs=122.5
Q ss_pred CCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-CChH
Q 002124 539 KNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLS-GWTA 617 (964)
Q Consensus 539 ~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~-G~TP 617 (964)
.+++..+..+.++++.+...+...++++|++.|++++.+|..|+||||+||. |+.+++++|+++|++++.+|.. |+||
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRP 81 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCH
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCH
Confidence 3455556677888999999999999999999999999999999999999999 9999999999999999999999 9999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 618 LHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 618 LH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDV------CDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCC------CSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999999999887 4579999999999999999999999998
No 78
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.86 E-value=1.4e-21 Score=194.00 Aligned_cols=155 Identities=21% Similarity=0.213 Sum_probs=134.1
Q ss_pred ccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHH
Q 002124 511 CEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS 590 (964)
Q Consensus 511 ~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~ 590 (964)
.+++|.++..+.. +.+..++ .. ..+++..+..+.++++.+...+...++++|++.|++++..|..|.||||+|+.
T Consensus 4 ~t~L~~A~~~g~~--~~v~~ll-~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 4 SLSVHQLAAQGEM--LYLATRI-EQ--ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACS 78 (167)
T ss_dssp CCCHHHHHHTTCH--HHHHHHH-HH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred cchHHHHHHCCCH--HHHHHHH-Hc--CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 3444554444443 5666666 32 23455556677888888888999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q 002124 591 LGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISG 670 (964)
Q Consensus 591 ~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~ 670 (964)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.++++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~~~ 152 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI------ETDSGYNSMDLAVALGYRSVQQ 152 (167)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999999999999999999999999999999999999999999999887 4579999999999999999999
Q ss_pred HHHHcC
Q 002124 671 FLAESS 676 (964)
Q Consensus 671 ~LLe~G 676 (964)
+|++++
T Consensus 153 ~L~~~~ 158 (167)
T 3v31_A 153 VIESHL 158 (167)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999987
No 79
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.86 E-value=1.1e-21 Score=194.33 Aligned_cols=159 Identities=21% Similarity=0.157 Sum_probs=135.5
Q ss_pred ccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHH
Q 002124 507 SEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLH 586 (964)
Q Consensus 507 ~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLH 586 (964)
+..+.++++.+...+.. +.+..++ .. ...+....+..+.++++.+...+...++++|++.|++++.+|..|+||||
T Consensus 5 ~~~~~~~l~~A~~~g~~--~~v~~ll-~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 80 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDV--ETVKKLC-TV-QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLH 80 (165)
T ss_dssp -CHHHHHHHHHHHHTCH--HHHHHHC-CT-TTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cchhhHHHHHHHHhCCH--HHHHHHH-Hc-CCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHH
Confidence 34455666666665554 6667666 21 23344444556778889999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCH
Q 002124 587 LAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK 666 (964)
Q Consensus 587 lAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~ 666 (964)
+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+. |+.
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~a~~-~~~ 153 (165)
T 3twr_A 81 NACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK------KNRDGNTPLDLVKD-GDT 153 (165)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCTGGGSCT-TCH
T ss_pred HHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc------cCCCCCChhHhHhc-CCh
Confidence 99999999999999999999999999999999999999999999999999999887 55799999999877 999
Q ss_pred HHHHHHHHcC
Q 002124 667 GISGFLAESS 676 (964)
Q Consensus 667 eiv~~LLe~G 676 (964)
+++++|+++|
T Consensus 154 ~i~~~L~~~g 163 (165)
T 3twr_A 154 DIQDLLRGDA 163 (165)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHhhcc
Confidence 9999999988
No 80
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.86 E-value=6.2e-21 Score=187.10 Aligned_cols=150 Identities=19% Similarity=0.180 Sum_probs=130.3
Q ss_pred ccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHH
Q 002124 511 CEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS 590 (964)
Q Consensus 511 ~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~ 590 (964)
.++++.+...+.. +.++.++ .... +++ .+..+.++++.+...+...++++|++.|++++.+|..|+||||+||.
T Consensus 3 ~~~L~~A~~~g~~--~~v~~Ll-~~g~--~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 76 (153)
T 1awc_B 3 GKKLLEAARAGQD--DEVRILM-ANGA--PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAAS 76 (153)
T ss_dssp HHHHHHHHHHTCH--HHHHHHH-HHTC--CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHH
T ss_pred cHHHHHHHHcCCH--HHHHHHH-HcCC--CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 3456666555554 6777777 3322 222 24567788888888899999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q 002124 591 LGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISG 670 (964)
Q Consensus 591 ~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~ 670 (964)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.++++
T Consensus 77 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~i~~ 150 (153)
T 1awc_B 77 EGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT------QSKFCKTAFDISIDNGNEDLAE 150 (153)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHH
T ss_pred cChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999887 5579999999999999999999
Q ss_pred HH
Q 002124 671 FL 672 (964)
Q Consensus 671 ~L 672 (964)
+|
T Consensus 151 ~L 152 (153)
T 1awc_B 151 IL 152 (153)
T ss_dssp HH
T ss_pred Hh
Confidence 87
No 81
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=4.2e-21 Score=185.04 Aligned_cols=125 Identities=22% Similarity=0.236 Sum_probs=117.8
Q ss_pred ccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcC
Q 002124 546 EKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCG 625 (964)
Q Consensus 546 ~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G 625 (964)
..+.++++.|+..+...+++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 44678888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 626 REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 626 ~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++.|
T Consensus 92 ~~~~v~~Ll~~g~~~~~------~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 92 HLEIAEVLLKHGADVNA------QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CHHHHHHHHHcCCCCcC------cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999887 5579999999999999999999999876
No 82
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=2e-21 Score=187.11 Aligned_cols=126 Identities=24% Similarity=0.279 Sum_probs=114.6
Q ss_pred CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 002124 571 GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEF 650 (964)
Q Consensus 571 gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D 650 (964)
|+|+ .+|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~ 73 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT------TG 73 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC------cC
Confidence 6778 6899999999999999999999999999999999999999999999999999999999999999887 45
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhhHhHHHHHHH
Q 002124 651 PLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSE 708 (964)
Q Consensus 651 ~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~~~iv~~Lle 708 (964)
..|.||||+|+..|+.+++++|+++| ++++.+|..|.||+++|.......++.
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~A~~~~~~~~l~ 126 (137)
T 3c5r_A 74 YQNDSPLHDAAKNGHVDIVKLLLSYG-----ASRNAVNIFGLRPVDYTDDESMKSLLL 126 (137)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCGGGGCCCHHHHHHHS
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHhhccHHHHHh
Confidence 79999999999999999999999999 899999999999999997655555554
No 83
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=1.4e-20 Score=177.97 Aligned_cols=119 Identities=22% Similarity=0.174 Sum_probs=106.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHH
Q 002124 578 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPS 657 (964)
Q Consensus 578 D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPL 657 (964)
+..|.||||+||..|+.++++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++. +|..|+|||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~tpL 77 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA------PDKHHITPL 77 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC------CCTTSCCHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc------CCCCCCCHH
Confidence 45788999999999999999999999999999999999999999999999999999999999887 457999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhhHhHHHHHH
Q 002124 658 DLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVS 707 (964)
Q Consensus 658 hlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~~~iv~~Ll 707 (964)
|+|+..|+.+++++|+++| ++++.+|..|.||+++|....+..++
T Consensus 78 ~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A~~~~~~~ll 122 (123)
T 3aaa_C 78 LSAVYEGHVSCVKLLLSKG-----ADKTVKGPDGLTAFEATDNQAIKALL 122 (123)
T ss_dssp HHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHCCCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHhCCHHHHHHh
Confidence 9999999999999999999 88999999999999999765555554
No 84
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.84 E-value=3e-20 Score=174.08 Aligned_cols=123 Identities=30% Similarity=0.324 Sum_probs=115.3
Q ss_pred chHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCH
Q 002124 548 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE 627 (964)
Q Consensus 548 ~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~ 627 (964)
|.++++.+...+...+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 45677788888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 628 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 628 eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|
T Consensus 82 ~~~~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 82 EVVKLLLEAGADVNA------KDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp HHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCcc------cCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 999999999999877 4579999999999999999999999999
No 85
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.83 E-value=6.3e-21 Score=188.11 Aligned_cols=129 Identities=17% Similarity=0.154 Sum_probs=114.6
Q ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCC
Q 002124 575 CILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSR 654 (964)
Q Consensus 575 n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~ 654 (964)
+..+..|.||||+||..|+.++|++|+++|++++.+|..|+||||+|+ .|+.+++++|+++|++++. +|..|+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~------~d~~g~ 78 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC------ADPATL 78 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC------CCTTTC
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC------cCCCCC
Confidence 456788999999999999999999999999999999999999999986 9999999999999999988 457999
Q ss_pred C-HHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCCCC
Q 002124 655 T-PSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPAN 715 (964)
Q Consensus 655 T-PLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~~ 715 (964)
| |||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .+++++|+++|+++..
T Consensus 79 ttpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 79 TRPVHDAAREGFLDTLVVLHRAG-----ARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHT-----CCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----
T ss_pred cHHHHHHHHCCCHHHHHHHHHcC-----CCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc
Confidence 9 999999999999999999999 899999999999999984 7999999999987665
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.83 E-value=1.9e-20 Score=180.39 Aligned_cols=122 Identities=25% Similarity=0.250 Sum_probs=113.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHH
Q 002124 578 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPS 657 (964)
Q Consensus 578 D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPL 657 (964)
...|.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.|||
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~t~L 84 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA------VDAIGFTPL 84 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTCCCHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------CCCCCCCHH
Confidence 45688999999999999999999999999999999999999999999999999999999999887 457999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHcc
Q 002124 658 DLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKT 710 (964)
Q Consensus 658 hlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~g 710 (964)
|+|+..|+.+++++|+++| ++++.+|..|.||+++|. .++++.|++.|
T Consensus 85 ~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 85 HLAAFIGHLEIAEVLLKHG-----ADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHcCCHHHHHHHHHcC-----CCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999 889999999999999985 68999998875
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=3.6e-20 Score=173.49 Aligned_cols=122 Identities=32% Similarity=0.370 Sum_probs=115.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH
Q 002124 580 EGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDL 659 (964)
Q Consensus 580 ~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhl 659 (964)
+|+||||+||..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++. +|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA------KDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc------cCCCCCcHHHH
Confidence 589999999999999999999999999999999999999999999999999999999999887 45799999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCC
Q 002124 660 ASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTAT 712 (964)
Q Consensus 660 Aa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~ 712 (964)
|+..|+.+++++|+++| ++++.+|..|.||+++|. .++++.|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAG-----ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHcChHHHHHHHHHcC-----CCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999 889999999999999984 6899999999873
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.83 E-value=5.4e-21 Score=196.19 Aligned_cols=146 Identities=15% Similarity=0.010 Sum_probs=110.2
Q ss_pred HHHHHHHhCHHHHHHHHHHCCCCCCccC-CCCCcHHHHHHHcCCH----HHHHHHHhCCCCCcccCCCCChHHHHHHHcC
Q 002124 551 LQKIMKEKLYSWLLRKVCEDGKGPCILD-DEGQGVLHLAASLGYD----WAIKPTVTAGVSINFRDLSGWTALHWAAYCG 625 (964)
Q Consensus 551 ll~~a~~~~~~~lvk~Ll~~gad~n~~D-~~G~TpLHlAa~~G~~----~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G 625 (964)
++.++..+.... ++.++..+ ++.++ ..|+||||+|+..|+. +++++||++|++||.+|..|+||||+|+..|
T Consensus 10 l~~Aa~~g~~~~-~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~ 86 (186)
T 3t8k_A 10 VSAAAMLGTYED-FLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGG 86 (186)
T ss_dssp HHHHHHHSCHHH-HHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHC
T ss_pred HHHHHHcCCHHH-HHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 445555555544 45555544 44555 6788888888888875 4788888888888888888888888888888
Q ss_pred C------HHHHHHHHHcCCCCCCCCCCCCCCCCCC-CHHHHHHHcC-----CHHHHHHHHH-cCCCCcccCCccCCCCCC
Q 002124 626 R------EKTVAVLLSLGAAPGLLTDPSPEFPLSR-TPSDLASSNG-----HKGISGFLAE-SSLTSLLLSLKMNDSADD 692 (964)
Q Consensus 626 ~------~eiV~~LL~~GAdvn~~~d~~~~D~~G~-TPLhlAa~~G-----~~eiv~~LLe-~G~~~~ladvn~~d~~G~ 692 (964)
+ .+++++|+++|+++|. +|..|+ ||||+|+..| +.+++++|++ +| ++++.+|..|.
T Consensus 87 ~~~~~~~~~iv~~Ll~~Gadin~------~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g-----ad~~~~d~~G~ 155 (186)
T 3t8k_A 87 GNDITGTTELCKIFLEKGADITA------LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG-----LQLLIKDKWGL 155 (186)
T ss_dssp TTCHHHHHHHHHHHHHTTCCSSS------CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT-----CCTTCCCTTSC
T ss_pred CcchhhHHHHHHHHHHCCCCCCc------cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC-----CCCcccCCCCC
Confidence 7 5778888888888887 446888 8888888844 3568888888 78 88888888888
Q ss_pred cHHHHhh----HhHHHHHHHcc
Q 002124 693 GALEDSI----AKAVQTVSEKT 710 (964)
Q Consensus 693 tpl~~a~----~~iv~~Lle~g 710 (964)
||+++|. ..+|++|.++.
T Consensus 156 TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 156 TALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp CHHHHHHTTTCHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHHH
Confidence 8888884 46777777654
No 89
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.83 E-value=9.9e-21 Score=200.04 Aligned_cols=141 Identities=20% Similarity=0.097 Sum_probs=121.3
Q ss_pred HHHHHHCCCCCCccC---CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCC
Q 002124 564 LRKVCEDGKGPCILD---DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 640 (964)
Q Consensus 564 vk~Ll~~gad~n~~D---~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdv 640 (964)
++.|+++|++++..+ ..|.||||+||..|+.++|++|++.|+++|.+|..|+||||+||..|+.++|++|+++|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 357888888887654 56778899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCC-CCCCcHHHHh------hHhHHHHHHHccCCC
Q 002124 641 GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMND-SADDGALEDS------IAKAVQTVSEKTATP 713 (964)
Q Consensus 641 n~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d-~~G~tpl~~a------~~~iv~~Lle~ga~~ 713 (964)
+. +|..|+||||+|+..|+.+++++|+++| ++++..+ ..|.||+++| ..+++++|++.|+++
T Consensus 81 n~------~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~ 149 (229)
T 2vge_A 81 NS------PDSHGWTPLHCAASCNDTVICMALVQHG-----AAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSM 149 (229)
T ss_dssp TC------CCTTCCCHHHHHHHTTCHHHHHHHHTTT-----CCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT
T ss_pred CC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc
Confidence 88 4579999999999999999999999999 8899886 5899999997 379999999999876
Q ss_pred CC
Q 002124 714 AN 715 (964)
Q Consensus 714 ~~ 715 (964)
+.
T Consensus 150 ~~ 151 (229)
T 2vge_A 150 GL 151 (229)
T ss_dssp TT
T ss_pred cc
Confidence 65
No 90
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.82 E-value=6.4e-21 Score=195.63 Aligned_cols=160 Identities=8% Similarity=-0.099 Sum_probs=128.2
Q ss_pred cHHHHHHHHhhhhhhhHHHHhhhcCCCCCCcccc-ccchHHHHHHHHhCHH----HHHHHHHHCCCCCCccCCCCCcHHH
Q 002124 512 EKQKLISKIIQLKEEEESYQMVEANPEKNLSQHV-EKYQILQKIMKEKLYS----WLLRKVCEDGKGPCILDDEGQGVLH 586 (964)
Q Consensus 512 ~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~-~~~~~ll~~a~~~~~~----~lvk~Ll~~gad~n~~D~~G~TpLH 586 (964)
..++.+...+.. +.+..++ ... ++..+ ..|.+++|.+...+.. .++++|+++|+++|.+|..|+||||
T Consensus 8 ~~l~~Aa~~g~~--~~~~~l~-~~~----~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh 80 (186)
T 3t8k_A 8 RTVSAAAMLGTY--EDFLELF-EKG----YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFF 80 (186)
T ss_dssp SSHHHHHHHSCH--HHHHHHH-HHS----SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHH
T ss_pred cHHHHHHHcCCH--HHHHHHH-hcC----cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 445555555554 3444444 221 22222 5577888888877743 5899999999999999999999999
Q ss_pred HHHHcCC------HHHHHHHHhCCCCCcccCCCCC-hHHHHHHHcC-----CHHHHHHHHH-cCCCCCCCCCCCCCCCCC
Q 002124 587 LAASLGY------DWAIKPTVTAGVSINFRDLSGW-TALHWAAYCG-----REKTVAVLLS-LGAAPGLLTDPSPEFPLS 653 (964)
Q Consensus 587 lAa~~G~------~~iVk~LL~~Gadvn~~D~~G~-TPLH~Aa~~G-----~~eiV~~LL~-~GAdvn~~~d~~~~D~~G 653 (964)
+|+..|+ .+++++|+++|+++|.+|..|+ ||||+|+..| +.+++++|++ +|++++. +|..|
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~------~d~~G 154 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI------KDKWG 154 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC------CCTTS
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc------cCCCC
Confidence 9999997 5789999999999999999999 9999999954 4569999999 9999988 55799
Q ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCC
Q 002124 654 RTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDS 689 (964)
Q Consensus 654 ~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~ 689 (964)
+||||+|+..|+.+++++|++.. .+.+++++
T Consensus 155 ~TpL~~A~~~~~~~~v~~L~~~~-----~~~~~~~~ 185 (186)
T 3t8k_A 155 LTALEFVKRCQKPIALKMMEDYI-----KKYNLKEN 185 (186)
T ss_dssp CCHHHHHHTTTCHHHHHHHHHHH-----HHHTCCC-
T ss_pred CCHHHHHHHcCCHHHHHHHHHHH-----HHHhcccC
Confidence 99999999999999999999876 55555553
No 91
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=3.7e-20 Score=192.81 Aligned_cols=134 Identities=21% Similarity=0.171 Sum_probs=93.8
Q ss_pred cchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCcccCCCCChHHHHHHHcC
Q 002124 547 KYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCG 625 (964)
Q Consensus 547 ~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~-Gadvn~~D~~G~TPLH~Aa~~G 625 (964)
.+.++++.++..+...+++.|++.|++++.+|..|+||||+||..|+.++|++|++. |++++.+|..|+||||+|+..|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 345566677777777778888888888888888888888888888888888888887 8888888888888888888888
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCC
Q 002124 626 REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSAD 691 (964)
Q Consensus 626 ~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G 691 (964)
+.++|++|+++|++++. +|..|.||||+|+..|+.++++.|++.| +..++.+..+
T Consensus 152 ~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~~l~~l~~~~-----~~~~~~~~~~ 206 (222)
T 3ehr_A 152 YADIVQLLLAKGARTDL------RNIEKKLAFDMATNAACASLLKKKQGTD-----AVRTLSNAED 206 (222)
T ss_dssp CHHHHHHHHHHTCCSCC------CCTTSCCHHHHCCSHHHHHHHC---------------------
T ss_pred CHHHHHHHHHcCCCCcc------ccCCCCCHHHHhcchhHHHHHHHHhccc-----hhhhccchhh
Confidence 88888888888888776 4467888888888888888888888877 4555554433
No 92
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=5.9e-20 Score=191.27 Aligned_cols=127 Identities=20% Similarity=0.191 Sum_probs=110.5
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCC
Q 002124 577 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL-GAAPGLLTDPSPEFPLSRT 655 (964)
Q Consensus 577 ~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~-GAdvn~~~d~~~~D~~G~T 655 (964)
.+..|.||||+||..|+.++|+.|++.|++++.+|..|+||||+||..|+.++|++|+++ |++++. +|..|+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~------~d~~g~t 142 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ------QNKLGDT 142 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC------CCTTSCC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc------cCCCCCC
Confidence 467899999999999999999999999999999999999999999999999999999999 999987 5579999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCCC
Q 002124 656 PSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPA 714 (964)
Q Consensus 656 PLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~ 714 (964)
|||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .++++.|++.++...
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKG-----ARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHT-----CCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred HHHHHHHcCCHHHHHHHHHcC-----CCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 999999999999999999999 899999999999999995 577777777776544
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.80 E-value=3.8e-20 Score=178.07 Aligned_cols=126 Identities=21% Similarity=0.163 Sum_probs=114.8
Q ss_pred cccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHc
Q 002124 545 VEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYC 624 (964)
Q Consensus 545 ~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~ 624 (964)
+..+.++++.++..+...++++|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 86 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKN 86 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHc
Confidence 45677888888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 002124 625 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS 676 (964)
Q Consensus 625 G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 676 (964)
|+.+++++|+++|++++. +|..|.||||+|+..++.+++.+|.+.+
T Consensus 87 ~~~~~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 87 GHVDIVKLLLSYGASRNA------VNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred CCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 999999999999999987 5579999999999999999998887665
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.80 E-value=1.7e-19 Score=170.51 Aligned_cols=115 Identities=22% Similarity=0.111 Sum_probs=104.9
Q ss_pred cchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCC
Q 002124 547 KYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGR 626 (964)
Q Consensus 547 ~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~ 626 (964)
.+.++++.+...+...+++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGH 85 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 45678888888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHH
Q 002124 627 EKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKG 667 (964)
Q Consensus 627 ~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~e 667 (964)
.+++++|+++|++++. +|..|.||||+|+..+..+
T Consensus 86 ~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 86 VSCVKLLLSKGADKTV------KGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HHHHHHHHHTTCCTTC------CCTTSCCHHHHCCCHHHHH
T ss_pred HHHHHHHHHcCCCCCC------cCCCCCCHHHHhCCHHHHH
Confidence 9999999999999887 5579999999995444333
No 95
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.79 E-value=4e-19 Score=159.98 Aligned_cols=91 Identities=37% Similarity=0.451 Sum_probs=86.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH
Q 002124 580 EGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDL 659 (964)
Q Consensus 580 ~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhl 659 (964)
+|+||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++. +|..|+||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA------KDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHH
Confidence 489999999999999999999999999999999999999999999999999999999999987 55799999999
Q ss_pred HHHcCCHHHHHHHHHcC
Q 002124 660 ASSNGHKGISGFLAESS 676 (964)
Q Consensus 660 Aa~~G~~eiv~~LLe~G 676 (964)
|+..|+.+++++|+++|
T Consensus 75 A~~~~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAG 91 (93)
T ss_dssp HHHTTCHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHcC
Confidence 99999999999999998
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.78 E-value=6e-19 Score=194.42 Aligned_cols=134 Identities=19% Similarity=0.111 Sum_probs=115.7
Q ss_pred HHHHHHHHhCHHHHHHHHHHCCCCCCc------cCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCcccCCCCChHHHH
Q 002124 550 ILQKIMKEKLYSWLLRKVCEDGKGPCI------LDDEGQGVLHLAASL---GYDWAIKPTVTAGVSINFRDLSGWTALHW 620 (964)
Q Consensus 550 ~ll~~a~~~~~~~lvk~Ll~~gad~n~------~D~~G~TpLHlAa~~---G~~~iVk~LL~~Gadvn~~D~~G~TPLH~ 620 (964)
..++.+...+....++.|++.|++++. .|..|+||||+||.. |+.+++++|+++|+++|.+|..|+||||+
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~ 232 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 232 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 445555556666777888899999998 689999999999997 89999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhhH
Q 002124 621 AAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA 700 (964)
Q Consensus 621 Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~~ 700 (964)
|+..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++ .|.||+++|..
T Consensus 233 A~~~g~~~~v~~Ll~~gad~~~------~d~~G~TpL~~A~~~~~~~iv~~Ll~~g-----a~------~g~tpLh~A~~ 295 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKGRALVGT------VNEAGETALDIARKKHHKECEELLEQAQ-----AG------TFAFPLHVDYS 295 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCCCSC------CCTTSCCHHHHHHHHTCHHHHHHHHHHH-----HH------TTSSCCC----
T ss_pred HHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHhc-----CC------CCCChhHHHHh
Confidence 9999999999999999999987 4579999999999999999999999998 43 47899988764
No 97
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.77 E-value=9.8e-19 Score=177.19 Aligned_cols=135 Identities=24% Similarity=0.280 Sum_probs=117.6
Q ss_pred ccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccC-CCCChHHHHHHHc
Q 002124 546 EKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYC 624 (964)
Q Consensus 546 ~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D-~~G~TPLH~Aa~~ 624 (964)
..+.++++.++..+...+++.|++ |+++|.+|..|+||||+||..|+.+++++|+++|+++|.+| ..|+||||+|+..
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 356788888999999999999999 99999999999999999999999999999999999999998 8999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----H
Q 002124 625 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----A 700 (964)
Q Consensus 625 G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~ 700 (964)
|+.+++++|+++|++++. +|..|+||||+|+..++. ..+.++++.+. .
T Consensus 121 ~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~----------------------~~~~~~l~~a~~~~~~ 172 (183)
T 3deo_A 121 VRPEVVEALVELGADIEV------EDERGLTALELAREILKT----------------------TPKGNPMQFGRRIGLE 172 (183)
T ss_dssp TCHHHHHHHHHHTCCTTC------CCTTSCCHHHHHHHHHHT----------------------CCCCSHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCCcC------CCCCCCCHHHHHHHhccC----------------------cccccHHHHHHHcCHH
Confidence 999999999999999987 557999999999874322 23567887775 4
Q ss_pred hHHHHHHHc
Q 002124 701 KAVQTVSEK 709 (964)
Q Consensus 701 ~iv~~Lle~ 709 (964)
++++.|.++
T Consensus 173 ~i~~~L~~~ 181 (183)
T 3deo_A 173 KVINVLEGQ 181 (183)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 666666543
No 98
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=2e-18 Score=202.96 Aligned_cols=127 Identities=19% Similarity=0.101 Sum_probs=113.1
Q ss_pred HHHHHHHHhCHHHHHHHHHHCCCCCCcc------CCCCCcHHHHHHH---cCCHHHHHHHHhCCCCCcccCCCCChHHHH
Q 002124 550 ILQKIMKEKLYSWLLRKVCEDGKGPCIL------DDEGQGVLHLAAS---LGYDWAIKPTVTAGVSINFRDLSGWTALHW 620 (964)
Q Consensus 550 ~ll~~a~~~~~~~lvk~Ll~~gad~n~~------D~~G~TpLHlAa~---~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~ 620 (964)
..++.+...+...+++.|++.|+++|.. |..|+||||+||. .|+.++|++||++|+++|.+|..|+||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 4566666677778899999999999988 8899999999976 899999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccC
Q 002124 621 AAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMN 687 (964)
Q Consensus 621 Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~ 687 (964)
||..|+.++|++|+++||++++ +|..|+||||+|+..|+.+++++|+++| ++++..
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~~~~Ll~~g-----a~~~~~ 269 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGT------VNEAGETALDIARKKHHKECEELLEQAQ-----AGTFAF 269 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSC------CCTTCCCHHHHHHHTTCHHHHHHHHHTC-----C-----
T ss_pred HHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHhC-----CCCCCC
Confidence 9999999999999999999988 4579999999999999999999999999 666554
No 99
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=4.4e-19 Score=165.40 Aligned_cols=109 Identities=28% Similarity=0.327 Sum_probs=101.4
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCC
Q 002124 576 ILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRT 655 (964)
Q Consensus 576 ~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~T 655 (964)
.+|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~d~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA------RSKDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC------CCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc------cCCCCCC
Confidence 4688999999999999999999999999999999999999999999999999999999999999887 4579999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHH
Q 002124 656 PSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGAL 695 (964)
Q Consensus 656 PLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl 695 (964)
|||+|+..|+.+++++|+++| ++++.++..|.+|-
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~g-----a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKG-----ADVNARSWGSSHHH 112 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTS-----SSHHHHSCCCC---
T ss_pred HHHHHHHCCCHHHHHHHHHcC-----CCCCcCCccccccc
Confidence 999999999999999999999 89999999888873
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.77 E-value=6.7e-19 Score=178.40 Aligned_cols=112 Identities=21% Similarity=0.126 Sum_probs=105.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHH
Q 002124 578 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPS 657 (964)
Q Consensus 578 D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPL 657 (964)
+..|.||||+||..|+.++++.|++ |+++|.+|..|+||||+|+..|+.+++++|+++|++++..++ ..|+|||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-----~~g~tpL 114 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDM-----RGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCS-----SSSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-----CCCCCHH
Confidence 4578999999999999999999999 999999999999999999999999999999999999988442 6899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhhH
Q 002124 658 DLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA 700 (964)
Q Consensus 658 hlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~~ 700 (964)
|+|+..|+.+++++|+++| ++++.+|..|.||+++|..
T Consensus 115 ~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 115 HMAAGYVRPEVVEALVELG-----ADIEVEDERGLTALELARE 152 (183)
T ss_dssp HHHHHTTCHHHHHHHHHHT-----CCTTCCCTTSCCHHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHcC-----CCCcCCCCCCCCHHHHHHH
Confidence 9999999999999999999 8999999999999999864
No 101
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.76 E-value=1.4e-18 Score=184.80 Aligned_cols=136 Identities=24% Similarity=0.278 Sum_probs=120.1
Q ss_pred ccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccC-CCCChHHHHHHHc
Q 002124 546 EKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYC 624 (964)
Q Consensus 546 ~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D-~~G~TPLH~Aa~~ 624 (964)
..+.++++.++..+...+++.|++ |+++|.+|..|+||||+||..|+.++|++|+++|+++|.+| ..|+||||+||..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 357889999999999999999999 99999999999999999999999999999999999999998 8899999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----H
Q 002124 625 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----A 700 (964)
Q Consensus 625 G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~ 700 (964)
|+.++|++|+++|++++. +|..|+||||+|+..+ ....+.+|++.+. .
T Consensus 122 g~~~~v~~Ll~~ga~~~~------~d~~g~t~l~~A~~~~----------------------~~~~~~~~l~~a~~~g~~ 173 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEV------EDERGLTALELAREIL----------------------KTTPKGNPMQFGRRIGLE 173 (244)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHHH----------------------TTCCCSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCC------CCCCCCcHHHHHHHHH----------------------hccCCCCHHHHHHHcChH
Confidence 999999999999999987 4579999999998622 1245789998874 6
Q ss_pred hHHHHHHHcc
Q 002124 701 KAVQTVSEKT 710 (964)
Q Consensus 701 ~iv~~Lle~g 710 (964)
+++++|++.+
T Consensus 174 ~iv~~L~~~~ 183 (244)
T 3ui2_A 174 KVINVLEGQV 183 (244)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 8888888864
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.76 E-value=1.1e-18 Score=185.67 Aligned_cols=142 Identities=17% Similarity=0.106 Sum_probs=125.8
Q ss_pred CccccccHHHHHHHHhhhhhhhHHHHhhhcCCCCCCccccccchHHHHHHHHhCHHHHHHHHHHCCCCCCccC-CCCCcH
Q 002124 506 LSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILD-DEGQGV 584 (964)
Q Consensus 506 ~~~~g~~~l~la~~i~~ll~~~~~~Ll~~~~~~~~is~~~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D-~~G~Tp 584 (964)
.+..|.+++|+++..+.. +.+..++ . ..+++..+..+.+++|.++..++..++++|+++|+++|.+| ..|+||
T Consensus 41 ~~~~g~t~L~~A~~~g~~--~~v~~Ll-~---~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~ 114 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADE--QALSQLL-E---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTA 114 (244)
T ss_dssp HHHHHHHHHHHHHTTTCH--HHHHHTT-T---TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCH
T ss_pred cccCCCCHHHHHHHcCCH--HHHHHHH-c---CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCH
Confidence 467899999999777665 7777777 3 45666677888999999999999999999999999999998 889999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 002124 585 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG 664 (964)
Q Consensus 585 LHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G 664 (964)
||+||..|+.++|++|+++|++++.+|..|+||||+|+..++ ...+.||||+|+..|
T Consensus 115 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------------~~~~~~~l~~a~~~g 171 (244)
T 3ui2_A 115 LHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK-----------------------TTPKGNPMQFGRRIG 171 (244)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------------TCCCSSHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------------ccCCCCHHHHHHHcC
Confidence 999999999999999999999999999999999999986321 137899999999999
Q ss_pred CHHHHHHHHHcC
Q 002124 665 HKGISGFLAESS 676 (964)
Q Consensus 665 ~~eiv~~LLe~G 676 (964)
+.+++++|++++
T Consensus 172 ~~~iv~~L~~~~ 183 (244)
T 3ui2_A 172 LEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHhc
Confidence 999999999975
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.76 E-value=2.1e-18 Score=195.56 Aligned_cols=144 Identities=17% Similarity=0.114 Sum_probs=114.6
Q ss_pred chHHHHHHHHh-CHHHHHHHHHHCCCCCCccC--CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHc
Q 002124 548 YQILQKIMKEK-LYSWLLRKVCEDGKGPCILD--DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYC 624 (964)
Q Consensus 548 ~~~ll~~a~~~-~~~~lvk~Ll~~gad~n~~D--~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~ 624 (964)
+.++++.+... +...+++.|++.|+++|..| ..|.||||+||..|+.++|++|+++|+++|.+|..|+||||+|+..
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 45677777777 88899999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh
Q 002124 625 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI 699 (964)
Q Consensus 625 G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~ 699 (964)
|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|++.+. ...+....+..+.|++++..
T Consensus 279 g~~~~v~~LL~~Gad~~~------~d~~G~TpL~~A~~~g~~~iv~lLl~~~~--~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGA------RDSEGRDPLTIAMETANADIVTLLRLAKM--REAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred CcHHHHHHHHHCcCCCCC------cCCCCCCHHHHHHHCCCHHHHHHHHHcCC--CcccccccCCCCCCHHHHHH
Confidence 999999999999999987 45799999999999999999999999873 22333344555667766553
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.75 E-value=9.3e-18 Score=182.72 Aligned_cols=121 Identities=18% Similarity=0.120 Sum_probs=107.9
Q ss_pred HHHHHHHhCHHHHHHHHHHCCCCCC------ccCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCcccCCCCChHHHHH
Q 002124 551 LQKIMKEKLYSWLLRKVCEDGKGPC------ILDDEGQGVLHLAASL---GYDWAIKPTVTAGVSINFRDLSGWTALHWA 621 (964)
Q Consensus 551 ll~~a~~~~~~~lvk~Ll~~gad~n------~~D~~G~TpLHlAa~~---G~~~iVk~LL~~Gadvn~~D~~G~TPLH~A 621 (964)
.++.+...+....++.++..|++++ ..|..|+||||+||.. |+.+++++|+++|+++|.+|..|+||||+|
T Consensus 133 ~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A 212 (278)
T 1dcq_A 133 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC 212 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH
T ss_pred hhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHH
Confidence 4444555555566788899999854 4488999999999999 899999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 002124 622 AYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSL 677 (964)
Q Consensus 622 a~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~ 677 (964)
+..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++|.
T Consensus 213 ~~~g~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 213 CLTDNAECLKLLLRGKASIEI------ANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHcCCCCCC------ccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999999999988 55799999999999999999999999984
No 105
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.73 E-value=5.8e-20 Score=209.04 Aligned_cols=122 Identities=18% Similarity=0.170 Sum_probs=105.1
Q ss_pred hHHHHHHHHhCHHHHHHHHHHCCCCC---CccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcc--cCCCCChHHHHHH-
Q 002124 549 QILQKIMKEKLYSWLLRKVCEDGKGP---CILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINF--RDLSGWTALHWAA- 622 (964)
Q Consensus 549 ~~ll~~a~~~~~~~lvk~Ll~~gad~---n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~--~D~~G~TPLH~Aa- 622 (964)
.++++.++..|+..++++|+++|+++ +..+.+ .||||+||..|+.++|++|+++|++++. +|..|+||||+||
T Consensus 129 ~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~ 207 (376)
T 2aja_A 129 YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAV 207 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHH
Confidence 45778888889999999999999752 222223 8999999999999999999999999988 8999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCC
Q 002124 623 YCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDS 689 (964)
Q Consensus 623 ~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~ 689 (964)
..|+.++|++|++.|+ .|.||||+|+.+|+.+++++|+++| ++++..+.
T Consensus 208 ~~G~~eiv~~Ll~~ga-------------~~~taL~~Aa~~g~~evv~lL~~~g-----a~~~~~~~ 256 (376)
T 2aja_A 208 GRGHHNVINFLLDCPV-------------MLAYAEIHEFEYGEKYVNPFIARHV-----NRLKEMHD 256 (376)
T ss_dssp TTCCHHHHHHHTTSHH-------------HHHHHHHCTTTTTTTTHHHHHHHHH-----HHHHHHHT
T ss_pred HCCCHHHHHHHHhCCC-------------ccchHHHHHHHCCCHHHHHHHHhcC-----cccccccH
Confidence 9999999999999764 4789999999999999999999998 55554443
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.69 E-value=7.5e-17 Score=189.49 Aligned_cols=124 Identities=12% Similarity=0.021 Sum_probs=113.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCccc------CCCCChHHHHHHH---cCCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 002124 581 GQGVLHLAASLGYDWAIKPTVTAGVSINFR------DLSGWTALHWAAY---CGREKTVAVLLSLGAAPGLLTDPSPEFP 651 (964)
Q Consensus 581 G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~------D~~G~TPLH~Aa~---~G~~eiV~~LL~~GAdvn~~~d~~~~D~ 651 (964)
..+.||.|+..|+.++|+.||+.|+++|.+ |..|+||||+||. .|+.++|++|+++|+++|. +|.
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~------~d~ 205 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA------KAA 205 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTC------CCS
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCc------cCC
Confidence 347899999999999999999999999988 8999999999976 8999999999999999988 457
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCCCC
Q 002124 652 LSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPAN 715 (964)
Q Consensus 652 ~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~~ 715 (964)
.|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .+++++|++.|++++.
T Consensus 206 ~g~TpLh~A~~~g~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 206 DGNTALHYAALYNQPDCLKLLLKGR-----ALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp SSCCHHHHHTTTTCHHHHHHHHHTC-----CCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999 999999999999999995 7999999999997765
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.69 E-value=2.3e-16 Score=171.74 Aligned_cols=125 Identities=13% Similarity=0.070 Sum_probs=114.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCc------ccCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCC
Q 002124 580 EGQGVLHLAASLGYDWAIKPTVTAGVSIN------FRDLSGWTALHWAAYC---GREKTVAVLLSLGAAPGLLTDPSPEF 650 (964)
Q Consensus 580 ~G~TpLHlAa~~G~~~iVk~LL~~Gadvn------~~D~~G~TPLH~Aa~~---G~~eiV~~LL~~GAdvn~~~d~~~~D 650 (964)
...++||.|+..|..+.+..++..|++++ ..|..|+||||+|+.. |+.+++++|+++|++++. +|
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~------~d 202 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK------QT 202 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC------CC
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc------cC
Confidence 34579999999999999999999999954 4588999999999999 999999999999999988 55
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCCCCC
Q 002124 651 PLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPAN 715 (964)
Q Consensus 651 ~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~~~~ 715 (964)
..|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .+++++|++.|+...+
T Consensus 203 ~~g~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 266 (278)
T 1dcq_A 203 GKGSTALHYCCLTDNAECLKLLLRGK-----ASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN 266 (278)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 79999999999999999999999999 899999999999999995 6999999999986654
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.68 E-value=1e-16 Score=181.80 Aligned_cols=125 Identities=18% Similarity=0.143 Sum_probs=114.6
Q ss_pred cCCCCCcHHHHHHHc-CCHHHHHHHHhCCCCCcccC--CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 002124 577 LDDEGQGVLHLAASL-GYDWAIKPTVTAGVSINFRD--LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLS 653 (964)
Q Consensus 577 ~D~~G~TpLHlAa~~-G~~~iVk~LL~~Gadvn~~D--~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G 653 (964)
.+..+.|+||+|+.. |+.++++.||+.|+++|..| ..|+||||+|+..|+.++|++|+++|++++. +|..|
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~------~d~~G 268 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ------ADSAG 268 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTS
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------CCCCC
Confidence 344567899999999 99999999999999999998 8999999999999999999999999999987 45799
Q ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCC
Q 002124 654 RTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTAT 712 (964)
Q Consensus 654 ~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~ 712 (964)
+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .+++++|+..+..
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~G-----ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKRG-----ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CCHHHHHHHcCcHHHHHHHHHCc-----CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99999999999999999999999 899999999999999984 6899999988753
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.68 E-value=1.1e-16 Score=176.42 Aligned_cols=123 Identities=12% Similarity=0.034 Sum_probs=113.6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcc------cCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCC
Q 002124 579 DEGQGVLHLAASLGYDWAIKPTVTAGVSINF------RDLSGWTALHWAAYC---GREKTVAVLLSLGAAPGLLTDPSPE 649 (964)
Q Consensus 579 ~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~------~D~~G~TPLH~Aa~~---G~~eiV~~LL~~GAdvn~~~d~~~~ 649 (964)
..+.++||.|+..|+.+.++.|+..|++++. .|..|+||||+|+.. |+.+++++|+++|++++. +
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~------~ 222 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA------K 222 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC------C
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC------C
Confidence 3356789999999999999999999999998 699999999999997 899999999999999988 4
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHhh----HhHHHHHHHccCC
Q 002124 650 FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTAT 712 (964)
Q Consensus 650 D~~G~TPLhlAa~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a~----~~iv~~Lle~ga~ 712 (964)
|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|. .+++++|++.+++
T Consensus 223 d~~G~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 223 AADGNTALHYAALYNQPDCLKLLLKGR-----ALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 579999999999999999999999999 899999999999999995 6999999999864
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.68 E-value=1.5e-16 Score=143.10 Aligned_cols=92 Identities=29% Similarity=0.297 Sum_probs=87.0
Q ss_pred chHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCH
Q 002124 548 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE 627 (964)
Q Consensus 548 ~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~ 627 (964)
|.++++.++..+...++++|++.|+++|.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 45677888888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCC
Q 002124 628 KTVAVLLSLGAA 639 (964)
Q Consensus 628 eiV~~LL~~GAd 639 (964)
+++++|+++||+
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999999985
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=1.6e-16 Score=147.97 Aligned_cols=93 Identities=26% Similarity=0.317 Sum_probs=84.8
Q ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 002124 574 PCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLS 653 (964)
Q Consensus 574 ~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G 653 (964)
+...|.+|.||||+||..|+.+++++|++.|++++.+|..|+||||+||..|+.+++++|+++|++++. +|..|
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g 90 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA------QDKFG 90 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTS
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc------cccCC
Confidence 344678899999999999999999999999999999999999999999999999999999999999887 45799
Q ss_pred CCHHHHHHHcCCHHHHHHH
Q 002124 654 RTPSDLASSNGHKGISGFL 672 (964)
Q Consensus 654 ~TPLhlAa~~G~~eiv~~L 672 (964)
+||||+|+..|+.+++++|
T Consensus 91 ~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHh
Confidence 9999999999999999987
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.65 E-value=7.2e-18 Score=191.77 Aligned_cols=147 Identities=14% Similarity=0.091 Sum_probs=121.6
Q ss_pred chHHHHHHHHhCHHHHHHHHHHCCCCC---CccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---cccCCCCChHHHHH
Q 002124 548 YQILQKIMKEKLYSWLLRKVCEDGKGP---CILDDEGQGVLHLAASLGYDWAIKPTVTAGVSI---NFRDLSGWTALHWA 621 (964)
Q Consensus 548 ~~~ll~~a~~~~~~~lvk~Ll~~gad~---n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadv---n~~D~~G~TPLH~A 621 (964)
..++++.++..|...+++.|++.|+.. +..+..|.||||+||..|+.++|++|+++|+++ +..+.+ +||||+|
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHH
Confidence 358899999999999999999999832 234556889999999999999999999999863 333333 9999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCC--CCCCCCCCCCCCCHHHHHH-HcCCHHHHHHHHHcCCCCcccCCccCCCCCCcHHHHh
Q 002124 622 AYCGREKTVAVLLSLGAAPGL--LTDPSPEFPLSRTPSDLAS-SNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDS 698 (964)
Q Consensus 622 a~~G~~eiV~~LL~~GAdvn~--~~d~~~~D~~G~TPLhlAa-~~G~~eiv~~LLe~G~~~~ladvn~~d~~G~tpl~~a 698 (964)
|..|+.++|++|+++|++++. .+ ..|.||||+|+ .+|+.+++++|++.| ++ |.||++.|
T Consensus 171 a~~G~~eiv~~Ll~~ga~~~~~~~d------~~g~TpL~~Aa~~~G~~eiv~~Ll~~g-----a~-------~~taL~~A 232 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPTEATAMIQ------AENYYAFRWAAVGRGHHNVINFLLDCP-----VM-------LAYAEIHE 232 (376)
T ss_dssp HHTTCHHHHHHHHHSCGGGHHHHHH------HHHHHHHHHHHSTTCCHHHHHHHTTSH-----HH-------HHHHHHCT
T ss_pred HHCCCHHHHHHHHHcCCccchhccC------CCCCCHHHHHHHHCCCHHHHHHHHhCC-----Cc-------cchHHHHH
Confidence 999999999999999998764 33 58999999999 999999999999977 22 78999988
Q ss_pred h----HhHHHHHHHccCCC
Q 002124 699 I----AKAVQTVSEKTATP 713 (964)
Q Consensus 699 ~----~~iv~~Lle~ga~~ 713 (964)
. .+++++|++.|+..
T Consensus 233 a~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 233 FEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp TTTTTTTHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHhcCccc
Confidence 4 68999999988643
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.62 E-value=2.3e-16 Score=146.89 Aligned_cols=107 Identities=21% Similarity=0.143 Sum_probs=96.6
Q ss_pred cccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHc
Q 002124 545 VEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYC 624 (964)
Q Consensus 545 ~~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~ 624 (964)
+..+.++++.++..+...+++.|++.|++++.+|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~ 85 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKN 85 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHC
Confidence 34567788888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHH
Q 002124 625 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPS 657 (964)
Q Consensus 625 G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPL 657 (964)
|+.+++++|+++|++++..+ ..|.||-
T Consensus 86 ~~~~~~~~Ll~~ga~~n~~~------~~~~~~~ 112 (115)
T 2l6b_A 86 GHHEIVKLLDAKGADVNARS------WGSSHHH 112 (115)
T ss_dssp TCHHHHHHHHTTSSSHHHHS------CCCC---
T ss_pred CCHHHHHHHHHcCCCCCcCC------ccccccc
Confidence 99999999999999998844 5788773
No 114
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.59 E-value=6.4e-16 Score=195.41 Aligned_cols=132 Identities=23% Similarity=0.176 Sum_probs=110.8
Q ss_pred hHHHHHHHHHhHHHHhchHHHHHHHhhceeeEeechhhhhHHHHHHHhHHHH--HHHHHHHHHHHHHHhhcchhhhHHhh
Q 002124 785 DGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIW--SVGILEKVILRWRRKGSGLRGFRRDA 862 (964)
Q Consensus 785 ~~~l~~aAv~IQk~~Rg~~~Rk~f~~lr~Aai~IQa~~Rg~~aRk~y~~~r~--aa~~IQ~~iR~~~~rr~~lr~~r~~~ 862 (964)
.+.++.+|+.||++||||+.|++|++++.++++||++|||+++|++|+.+++ ||++||+.||+|..|+.+.+ .|..
T Consensus 764 ~~~l~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~-lr~a- 841 (1080)
T 2dfs_A 764 ADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQC-MRDA- 841 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHhhHHHHHHHHH-HHHH-
Confidence 4567889999999999999999999999999999999999999999987654 99999999999998877653 2222
Q ss_pred hcCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHhcc
Q 002124 863 LGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETK 927 (964)
Q Consensus 863 ~~~~i~iQa~~~~~~~~R~~k~~Rkq~~~~~~~Aa~~iQs~~R~~~AR~qy~rl~~~~~~iQe~~ 927 (964)
++.||+ .+|++..+|+....+.+.|+++||+.||++.+|+.|++++++++.+|..|
T Consensus 842 ---ai~IQs------~~Rg~laRr~~~~lr~~~aav~IQ~~~Rg~l~R~~y~~~~~aai~iQs~~ 897 (1080)
T 2dfs_A 842 ---TIALQA------LLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCY 897 (1080)
T ss_dssp ---HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHTTTTHHHHHHHHHHH
T ss_pred ---HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 457788 99999555544444556789999999999999999999999999998665
No 115
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=99.56 E-value=4.8e-17 Score=148.86 Aligned_cols=86 Identities=31% Similarity=0.709 Sum_probs=79.4
Q ss_pred ceEeEeeCCCCCCCCCCeEEEEecccccccccccccchhhhcCChHHHHHHHHcCCCCCCCCCCCCCCcceeecccCCcc
Q 002124 377 LFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLA 456 (964)
Q Consensus 377 l~~I~dfSP~wa~~~ggtKVlI~G~~~~~~~~~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~~ng~~ 456 (964)
++.|+||||+|+|..|||||+|+|.|+.. ..+|.|+||+.+|+.++++.|+++|++|+|..|.+||++.+.+..
T Consensus 6 ~~~Itd~sP~~gp~sGGTkv~I~G~~L~~-----gs~~~~~fG~~~vpa~~~s~~vl~C~tPp~~~G~v~~~v~~d~~~- 79 (95)
T 2cxk_A 6 SGMVTDYSPEWSYPEGGVKVLITGPWQEA-----SNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQI- 79 (95)
T ss_dssp CSCCCEEECSEECTTCCCEEEEESSCCCC-----SSCEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTEE-
T ss_pred cEEEEEECCCcccCCCCEEEEEEeECCCC-----CccEEEEECCEEEeEEEeECCEEEEEecCCCCceEeEEEEECCee-
Confidence 56999999999999999999999999975 348999999999999999999999999999999999999998766
Q ss_pred cchhhhhhhhcc
Q 002124 457 CSEVREFDYIVG 468 (964)
Q Consensus 457 ~seVv~feyl~~ 468 (964)
+++.+.|+|+.+
T Consensus 80 ~s~~~~FeY~~~ 91 (95)
T 2cxk_A 80 ISNSVVFEYKSG 91 (95)
T ss_dssp CSCCEEEEECCC
T ss_pred cCCceEEEEeCC
Confidence 599999999865
No 116
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.54 E-value=2.5e-15 Score=190.01 Aligned_cols=147 Identities=18% Similarity=0.115 Sum_probs=113.0
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHhhhhhcchhhHHHHHHHhhhcCCcchhHHHHHHHHHhHHHHhchHHHHHHHhh--cee
Q 002124 737 QAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLI--RQR 814 (964)
Q Consensus 737 qaA~~Iq~afR~~s~~rkq~~~~~de~~~s~e~a~~l~A~k~~k~~~~~~~l~~aAv~IQk~~Rg~~~Rk~f~~l--r~A 814 (964)
.+|..||+.+|.+..+++ +.++..+++.||++||||..|+.|..+ .+|
T Consensus 769 ~aa~~IQa~~Rg~l~Rk~------------------------------~~~~r~aai~IQ~~~Rg~~aR~~~~~lr~~~A 818 (1080)
T 2dfs_A 769 AACIRIQKTIRGWLMRKK------------------------------YMRMRRAAITIQRYVRGHQARCYATFLRRTRA 818 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHH------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH------------------------------hhhhHHHHHHHHHHHHHHHHhhcccccccchh
Confidence 378889999998766655 345668999999999999999988755 468
Q ss_pred eEeechhhhhHHHHHHHhHHHHHHHHHHHHHHHHHHhhcchhhhHHhhhcCCCCCCCCCCChhHHHHHHHHHHHHHHHHH
Q 002124 815 IVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQ 894 (964)
Q Consensus 815 ai~IQa~~Rg~~aRk~y~~~r~aa~~IQ~~iR~~~~rr~~lr~~r~~~~~~~i~iQa~~~~~~~~R~~k~~Rkq~~~~~~ 894 (964)
|++||++||||.+|+.|.+++.++++||+.||++..|+... .++... .++.||+ .||++ ..|+.+... +
T Consensus 819 Ai~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~-~lr~~~--aav~IQ~------~~Rg~-l~R~~y~~~-~ 887 (1080)
T 2dfs_A 819 AIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQ-MMLREH--KSIIIQK------HVRGW-LARVHYHRT-L 887 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHH------HHTTT-HHHHHTTTT-H
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHH------HHHHH-HHHHHHHHH-H
Confidence 99999999999999999999999999999999988776543 333332 2457787 89988 455555444 7
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHHHHHH
Q 002124 895 KALGRVKSMVQYPEARAQYRRLLTVVEGSR 924 (964)
Q Consensus 895 ~Aa~~iQs~~R~~~AR~qy~rl~~~~~~iQ 924 (964)
+|++.||++||++.||++|++++.++..++
T Consensus 888 ~aai~iQs~~R~~laRr~~~~Lk~ear~~~ 917 (1080)
T 2dfs_A 888 KAIVYLQCCYRRMMAKRELKKLKIEARSVE 917 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTC--------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 899999999999999999999987765444
No 117
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.49 E-value=1.1e-13 Score=128.63 Aligned_cols=88 Identities=23% Similarity=0.164 Sum_probs=83.2
Q ss_pred ccchHHHHHHHHhCHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcC
Q 002124 546 EKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCG 625 (964)
Q Consensus 546 ~~~~~ll~~a~~~~~~~lvk~Ll~~gad~n~~D~~G~TpLHlAa~~G~~~iVk~LL~~Gadvn~~D~~G~TPLH~Aa~~G 625 (964)
..+.++++.++..+...+++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 101 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNG 101 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcC
Confidence 45677888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHH
Q 002124 626 REKTVAVL 633 (964)
Q Consensus 626 ~~eiV~~L 633 (964)
+.+++++|
T Consensus 102 ~~~~~~~L 109 (110)
T 2zgd_A 102 NEDLAEIL 109 (110)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 99999987
No 118
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.99 E-value=1.2e-10 Score=96.79 Aligned_cols=51 Identities=35% Similarity=0.513 Sum_probs=48.0
Q ss_pred HHHHHHHHHhHHHHhchHHHHHHHhhceeeEeechhhhhHHHHHHHhHHHH
Q 002124 786 GLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIW 836 (964)
Q Consensus 786 ~~l~~aAv~IQk~~Rg~~~Rk~f~~lr~Aai~IQa~~Rg~~aRk~y~~~r~ 836 (964)
++++.+|+.||++||||..|+.|++++.++++||++|||+.+|+.|..++.
T Consensus 2 ~~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~r~ 52 (58)
T 2ix7_C 2 DKLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRR 52 (58)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357889999999999999999999999999999999999999999998876
No 119
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.63 E-value=7.1e-09 Score=82.68 Aligned_cols=43 Identities=23% Similarity=0.257 Sum_probs=32.7
Q ss_pred HHHHHHhHHHHhchHHHHHHHhhce--eeEeechhhhhHHHHHHH
Q 002124 789 HSAAIQIQKKFRGWKKRKEFLLIRQ--RIVKIQAHVRGHQARKKY 831 (964)
Q Consensus 789 ~~aAv~IQk~~Rg~~~Rk~f~~lr~--Aai~IQa~~Rg~~aRk~y 831 (964)
..+++.||+.||||+.|+.|..+++ |+++||++||||.+|+.|
T Consensus 3 r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 3 SQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 3567778888888888888777776 777777777777777766
No 120
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.49 E-value=3e-08 Score=79.07 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=40.2
Q ss_pred hceeeEeechhhhhHHHHHHHhHHHH--HHHHHHHHHHHHHHhhcc
Q 002124 811 IRQRIVKIQAHVRGHQARKKYRPIIW--SVGILEKVILRWRRKGSG 854 (964)
Q Consensus 811 lr~Aai~IQa~~Rg~~aRk~y~~~r~--aa~~IQ~~iR~~~~rr~~ 854 (964)
++.+++.||++|||+++|+.|..+++ |+++||+.||||..++.+
T Consensus 2 ~r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 2 ISQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 56789999999999999999999988 999999999999887654
No 121
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.37 E-value=1.4e-07 Score=78.25 Aligned_cols=46 Identities=17% Similarity=0.302 Sum_probs=40.9
Q ss_pred hhceeeEeechhhhhHHHHHHHhHHHHHHHHHHHHHHHHHHhhcch
Q 002124 810 LIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGL 855 (964)
Q Consensus 810 ~lr~Aai~IQa~~Rg~~aRk~y~~~r~aa~~IQ~~iR~~~~rr~~l 855 (964)
++..++++||++||||.+|+.|.+++.+++.||+.||||..|+...
T Consensus 3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~ 48 (58)
T 2ix7_C 3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAK 48 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999988766543
No 122
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=97.18 E-value=0.0001 Score=91.11 Aligned_cols=47 Identities=21% Similarity=0.304 Sum_probs=33.9
Q ss_pred hHHHHHHHHHhHHHHhchHHHHHHHhh---ceeeEeechhhhhHHHHHHH
Q 002124 785 DGLAHSAAIQIQKKFRGWKKRKEFLLI---RQRIVKIQAHVRGHQARKKY 831 (964)
Q Consensus 785 ~~~l~~aAv~IQk~~Rg~~~Rk~f~~l---r~Aai~IQa~~Rg~~aRk~y 831 (964)
.+++..+++.||++||||++|++|+++ |.|+++||++||+|.+||.|
T Consensus 775 ~~~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~ 824 (837)
T 1kk8_A 775 DERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 824 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence 455667777788888888888887776 56677777777777776654
No 123
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=97.12 E-value=0.00016 Score=60.93 Aligned_cols=45 Identities=20% Similarity=0.253 Sum_probs=30.0
Q ss_pred HHHHHHHHHhHHHHhchHHHHHHHhh---ceeeEeechhhhhHHHHHH
Q 002124 786 GLAHSAAIQIQKKFRGWKKRKEFLLI---RQRIVKIQAHVRGHQARKK 830 (964)
Q Consensus 786 ~~l~~aAv~IQk~~Rg~~~Rk~f~~l---r~Aai~IQa~~Rg~~aRk~ 830 (964)
+++...++.||+..|||.+|+.|.++ +.|+.+||.++|+|..++.
T Consensus 3 ~~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~ 50 (64)
T 1wdc_A 3 ERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 50 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 45666777777777777777777766 4555566666666665543
No 124
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=97.00 E-value=0.00015 Score=61.01 Aligned_cols=38 Identities=26% Similarity=0.320 Sum_probs=19.4
Q ss_pred eEeechhhhhHHHHHHHhHH---HHHHHHHHHHHHHHHHhh
Q 002124 815 IVKIQAHVRGHQARKKYRPI---IWSVGILEKVILRWRRKG 852 (964)
Q Consensus 815 ai~IQa~~Rg~~aRk~y~~~---r~aa~~IQ~~iR~~~~rr 852 (964)
++.||+.+||+.+|+.|+++ +.|+.+||+.+|.|...+
T Consensus 7 ~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr 47 (63)
T 2bl0_A 7 VKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK 47 (63)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34445555555555555444 335555666666555543
No 125
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=96.96 E-value=0.00034 Score=58.76 Aligned_cols=45 Identities=24% Similarity=0.299 Sum_probs=40.2
Q ss_pred HHHHHHHHhHHHHhchHHHHHHHhh---ceeeEeechhhhhHHHHHHH
Q 002124 787 LAHSAAIQIQKKFRGWKKRKEFLLI---RQRIVKIQAHVRGHQARKKY 831 (964)
Q Consensus 787 ~l~~aAv~IQk~~Rg~~~Rk~f~~l---r~Aai~IQa~~Rg~~aRk~y 831 (964)
++...++.||+..|||.+|+.|.++ +.|+.+||.++|+|..++.+
T Consensus 2 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w 49 (63)
T 2bl0_A 2 RIGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW 49 (63)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 4677889999999999999999998 77888999999999988753
No 126
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=96.88 E-value=0.0027 Score=82.06 Aligned_cols=45 Identities=27% Similarity=0.339 Sum_probs=26.3
Q ss_pred HHHHHHHHhHHHHhchHHHHHHHhhc---eeeEeechhhhhHHHHHHH
Q 002124 787 LAHSAAIQIQKKFRGWKKRKEFLLIR---QRIVKIQAHVRGHQARKKY 831 (964)
Q Consensus 787 ~l~~aAv~IQk~~Rg~~~Rk~f~~lr---~Aai~IQa~~Rg~~aRk~y 831 (964)
++..+++.||++||||++|++|++++ .|+++||++||+|.+|+.|
T Consensus 790 ~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~ 837 (1184)
T 1i84_S 790 KITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW 837 (1184)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44456666666666666666666543 4555666666666655543
No 127
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=96.85 E-value=0.00048 Score=58.07 Aligned_cols=43 Identities=26% Similarity=0.498 Sum_probs=37.1
Q ss_pred hceeeEeechhhhhHHHHHHHhHH---HHHHHHHHHHHHHHHHhhc
Q 002124 811 IRQRIVKIQAHVRGHQARKKYRPI---IWSVGILEKVILRWRRKGS 853 (964)
Q Consensus 811 lr~Aai~IQa~~Rg~~aRk~y~~~---r~aa~~IQ~~iR~~~~rr~ 853 (964)
+...++.||+.+||+.+|+.|+++ +.|+.+||+.+|.|...+.
T Consensus 5 l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~ 50 (64)
T 1wdc_A 5 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 50 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 445678899999999999999999 5588899999999987653
No 128
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=96.72 E-value=0.0017 Score=83.96 Aligned_cols=52 Identities=21% Similarity=0.151 Sum_probs=42.9
Q ss_pred HHHHHHHhhceeeEeechhhhhHHHHHHHhHHH---HHHHHHHHHHHHHHHhhcc
Q 002124 803 KKRKEFLLIRQRIVKIQAHVRGHQARKKYRPII---WSVGILEKVILRWRRKGSG 854 (964)
Q Consensus 803 ~~Rk~f~~lr~Aai~IQa~~Rg~~aRk~y~~~r---~aa~~IQ~~iR~~~~rr~~ 854 (964)
+...+-.++...++.||++||||++|++|.+++ .|+++||+.||+|..+|..
T Consensus 783 LE~~r~~~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~ 837 (1184)
T 1i84_S 783 LEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW 837 (1184)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 333444566778899999999999999999985 4899999999999988754
No 129
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=96.62 E-value=0.00093 Score=82.63 Aligned_cols=49 Identities=22% Similarity=0.338 Sum_probs=41.7
Q ss_pred HHHhhceeeEeechhhhhHHHHHHHhHH---HHHHHHHHHHHHHHHHhhcch
Q 002124 807 EFLLIRQRIVKIQAHVRGHQARKKYRPI---IWSVGILEKVILRWRRKGSGL 855 (964)
Q Consensus 807 ~f~~lr~Aai~IQa~~Rg~~aRk~y~~~---r~aa~~IQ~~iR~~~~rr~~l 855 (964)
+-.++.+.++.||++||||++|++|+++ +.|+++||+.||+|..+|...
T Consensus 774 r~~~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~~ 825 (837)
T 1kk8_A 774 RDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ 825 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchH
Confidence 3455667889999999999999999998 569999999999999876553
No 130
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=95.15 E-value=0.0012 Score=63.20 Aligned_cols=71 Identities=20% Similarity=0.281 Sum_probs=61.2
Q ss_pred eEeEeeCCCCCCCCCCeEEEEecccccccccccccchhhhcCChHHHHHHHHcCCCCCCCCC-CCCCCcceeecccCCc
Q 002124 378 FSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPP-HAVGRVPFYITCSNRL 455 (964)
Q Consensus 378 ~~I~dfSP~wa~~~ggtKVlI~G~~~~~~~~~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~-~~~G~TPLhvA~~ng~ 455 (964)
..|+.++|..+...||+.|+|.|..|.+ ++-|+||+..+-.+++...+++|.+|| +.+|.+.+.+.-.+..
T Consensus 6 P~I~~i~P~eG~~~GG~~V~I~G~nF~~-------GlqV~FG~t~~w~e~itphairv~~PP~~~pG~V~VTl~~k~kq 77 (138)
T 3muj_A 6 PCIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ 77 (138)
T ss_dssp CEEEEEESSEEETTCCCEEEEEEESCCT-------TCEEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEE
T ss_pred CceeEecCCCCCccCCeEEEEeCCCccc-------CCEEEECCeeeeeeeecccceEEECCCCCCCCceEEEEeecCcc
Confidence 5899999999999999999999988876 678999998877777888999999998 6779999888554443
No 131
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=94.43 E-value=0.0011 Score=83.61 Aligned_cols=45 Identities=7% Similarity=0.017 Sum_probs=37.5
Q ss_pred HHHHHHHHhHHHHhchHHHHHHHhhceeeEeechhhhhHHHHHHHh
Q 002124 787 LAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYR 832 (964)
Q Consensus 787 ~l~~aAv~IQk~~Rg~~~Rk~f~~lr~Aai~IQa~~Rg~~aRk~y~ 832 (964)
.+..+++.||+ +|||+.|++|++++++++.||..+|+++.|+.+.
T Consensus 773 ~~~~~~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~~ 817 (1052)
T 4anj_A 773 DPDHLAELVKR-VNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEAV 817 (1052)
T ss_dssp CHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 35677777775 7999999999999999999999999987766543
No 132
>3mlp_A Transcription factor COE1; transcription factor, pseudo-IG-fold, TIG-domain, IPT-domain loop-helix; HET: DNA CIT; 2.80A {Mus musculus} PDB: 3n50_A
Probab=92.61 E-value=0.008 Score=65.28 Aligned_cols=72 Identities=19% Similarity=0.276 Sum_probs=63.0
Q ss_pred ceEeEeeCCCCCCCCCCeEEEEecccccccccccccchhhhcCChHHHHHHHHcCCCCCCCCC-CCCCCcceeecccCCc
Q 002124 377 LFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPP-HAVGRVPFYITCSNRL 455 (964)
Q Consensus 377 l~~I~dfSP~wa~~~ggtKVlI~G~~~~~~~~~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~-~~~G~TPLhvA~~ng~ 455 (964)
...|+.++|..|...||+.|+|.|..|.+ ++-+.||...+-.+++...+++|.+|| +.+|.+.+.+.-.+..
T Consensus 231 tP~IkaIsPnEG~~tGG~tV~IiGenFf~-------GLQVvFGtt~vWselITphAIRV~tPPr~~PGvVdVTLs~ksKq 303 (402)
T 3mlp_A 231 TPCIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVIFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ 303 (402)
T ss_dssp CCEEEECSSCEECTTCCCEEEEEEECCCT-------TCEEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEE
T ss_pred CcceEEecCCCCCccCCeEEEEeCCCccc-------CCEEEEccEeeeeEEecccceEEECCCCCCCCceEEEEEecCcc
Confidence 36999999999999999999999998876 678999999988888899999999999 7789999888555443
No 133
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=86.97 E-value=0.36 Score=34.58 Aligned_cols=21 Identities=24% Similarity=0.398 Sum_probs=17.1
Q ss_pred HHHHHHHhHHHHhchHHHHHH
Q 002124 788 AHSAAIQIQKKFRGWKKRKEF 808 (964)
Q Consensus 788 l~~aAv~IQk~~Rg~~~Rk~f 808 (964)
-..+|+.||+.||+|+.|+..
T Consensus 5 Ee~aA~vIQrA~R~yl~rr~~ 25 (31)
T 2l53_B 5 EEVSAMVIQRAFRRHLLQRSL 25 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 346899999999999988763
No 134
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=86.64 E-value=0.4 Score=46.66 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=22.5
Q ss_pred ceeeEeechhhhhHHHHHHHhHHHHHHHHHH
Q 002124 812 RQRIVKIQAHVRGHQARKKYRPIIWSVGILE 842 (964)
Q Consensus 812 r~Aai~IQa~~Rg~~aRk~y~~~r~aa~~IQ 842 (964)
+.++++||+.+|||++|++|+....+...+.
T Consensus 45 ~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~ 75 (148)
T 3gn4_A 45 AEACIKMQKTIRMWLCKRRHKPRIDGLVKVG 75 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 3577888888888888888877666554443
No 135
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=86.52 E-value=0.34 Score=59.67 Aligned_cols=30 Identities=37% Similarity=0.651 Sum_probs=19.1
Q ss_pred HHHHHHHHHhHHHHhchHHHHHHHhhceee
Q 002124 786 GLAHSAAIQIQKKFRGWKKRKEFLLIRQRI 815 (964)
Q Consensus 786 ~~l~~aAv~IQk~~Rg~~~Rk~f~~lr~Aa 815 (964)
+++..+++.||++||||++|++|+++|+|+
T Consensus 765 ~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 765 DKLRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445666777777777777777777766654
No 136
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=86.46 E-value=0.3 Score=33.93 Aligned_cols=19 Identities=26% Similarity=0.480 Sum_probs=15.4
Q ss_pred HHHHHHHhHHHHhchHHHH
Q 002124 788 AHSAAIQIQKKFRGWKKRK 806 (964)
Q Consensus 788 l~~aAv~IQk~~Rg~~~Rk 806 (964)
-..||+.||+.||+|+.|+
T Consensus 5 Ee~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 5 EEVSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4568899999999988764
No 137
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=85.38 E-value=0.16 Score=62.11 Aligned_cols=74 Identities=15% Similarity=0.159 Sum_probs=1.2
Q ss_pred ceEeEeeCCCCCCCCCCeEEEEecccccccccccccchhhhcCChHHHHHHHHcCCCCCCCCCC-CCCCcceeecccCCc
Q 002124 377 LFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPH-AVGRVPFYITCSNRL 455 (964)
Q Consensus 377 l~~I~dfSP~wa~~~ggtKVlI~G~~~~~~~~~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~-~~G~TPLhvA~~ng~ 455 (964)
.+.|+.++|.+++..||+.|+|+|..|..- ....+.+|..+..-..+....+.|..|+. ..|.+|+.+...+..
T Consensus 635 ~P~I~sisP~~G~~sGGt~ITI~G~nf~~~-----~~~~V~ig~~~C~i~~~s~t~I~C~tP~~~~~g~~~V~V~idg~~ 709 (727)
T 2uzx_B 635 DPVITSISPKYGPMAGGTLLTLTGNYLNSG-----NSRHISIGGKTCTLKSVSNSILECYTPAQTISTEFAVKLKIDLAN 709 (727)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred cceeEEECCCccccCCCEEEEEEEECCCCC-----CceEEEECCEEeeEEeecCCEEEEEcCCCCCCceEEEEEEECCEE
Confidence 567999999999999999999999999752 24678889886655556777889999984 467788888776544
No 138
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=84.48 E-value=0.12 Score=47.14 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=52.3
Q ss_pred ceEeEeeCCCCCCCCCCeEEEEecccccccccccccchhhhcCChHHHH--HHHHcCCCCCCCCCCCCCCcceeecccCC
Q 002124 377 LFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPA--EVLADGVLCCRIPPHAVGRVPFYITCSNR 454 (964)
Q Consensus 377 l~~I~dfSP~wa~~~ggtKVlI~G~~~~~~~~~~~~~~Ac~fG~veVv~--~LL~~GvlrC~~p~~~~G~TPLhvA~~ng 454 (964)
...|++|+|..++. ||+|+|.|.+|..... .. ..+..|..+..- .......+.|..+++..+.-++.+...++
T Consensus 7 ~P~It~i~P~~Gp~--GT~vTI~G~nlg~~~s--dv-~~V~vgg~~C~~~~~~~s~~~IvC~~~~~~~~~g~V~V~v~~~ 81 (99)
T 1uad_C 7 PPLVTGISPNEGIP--WTKVTIRGENLGTGPT--DL-IGLTICGHNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTKSG 81 (99)
T ss_dssp CCEEEEEESSEEST--TCEEEEEEECSCSSGG--GE-EEEEETTEECGGGCEEEETTEEEEECCCCSSSSCCEEEEETTT
T ss_pred CCEEEEEECCCcCC--CCEEEEEEEeCCCCcc--cc-eEEEECCEEceEeeceeecCEEEEEeCCCCCcceeEEEEECCC
Confidence 45899999999988 7999999999976421 11 236666653322 12344668899877666566666655432
Q ss_pred -cccchhhhhhhh
Q 002124 455 -LACSEVREFDYI 466 (964)
Q Consensus 455 -~~~seVv~feyl 466 (964)
.+.+. ..|.|.
T Consensus 82 ~~~~s~-~~F~y~ 93 (99)
T 1uad_C 82 GRGTST-VSFKLL 93 (99)
T ss_dssp EECEES-SCCEEC
T ss_pred CcEEec-ceEEEe
Confidence 22232 255554
No 139
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=83.46 E-value=0.4 Score=60.67 Aligned_cols=39 Identities=8% Similarity=0.100 Sum_probs=30.5
Q ss_pred hceeeEeechhhhhHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 002124 811 IRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRR 850 (964)
Q Consensus 811 lr~Aai~IQa~~Rg~~aRk~y~~~r~aa~~IQ~~iR~~~~ 850 (964)
+.++++.|| .+|||++|++|++++++++.||+.+|+++.
T Consensus 774 ~~~~~~~iq-~~r~~l~r~~~~k~~~~a~~i~~~~r~~~~ 812 (1052)
T 4anj_A 774 PDHLAELVK-RVNHWLICSRWKKVQWCSLSVIKLKNKIKY 812 (1052)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555 689999999999999999999987766543
No 140
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=82.87 E-value=0.3 Score=60.23 Aligned_cols=30 Identities=30% Similarity=0.389 Sum_probs=21.4
Q ss_pred HhhceeeEeechhhhhHHHHHHHhHHHHHH
Q 002124 809 LLIRQRIVKIQAHVRGHQARKKYRPIIWSV 838 (964)
Q Consensus 809 ~~lr~Aai~IQa~~Rg~~aRk~y~~~r~aa 838 (964)
.+++++++.||++||||++|++|+++|.|+
T Consensus 765 ~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 765 DKLRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345567788888888888888888877654
No 141
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=78.89 E-value=7.8 Score=37.67 Aligned_cols=18 Identities=22% Similarity=0.237 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 002124 837 SVGILEKVILRWRRKGSG 854 (964)
Q Consensus 837 aa~~IQ~~iR~~~~rr~~ 854 (964)
++++||+.+|+|..|++.
T Consensus 47 ~~i~iQktvR~~L~rkkh 64 (148)
T 3gn4_A 47 ACIKMQKTIRMWLCKRRH 64 (148)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 445555555555554443
No 142
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=75.67 E-value=0.33 Score=55.39 Aligned_cols=72 Identities=19% Similarity=0.217 Sum_probs=57.2
Q ss_pred CceEeEeeCCCCCCCCCCeEEEEecccccccccccccchhhhcCChHHHHHHHHcCCCCCCCCCCCC-CCcceeecccC
Q 002124 376 QLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAV-GRVPFYITCSN 453 (964)
Q Consensus 376 ~l~~I~dfSP~wa~~~ggtKVlI~G~~~~~~~~~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~-G~TPLhvA~~n 453 (964)
+...|++|+|..+. .|++|+|.|..|.+. .....++||..+..-.-+....+.|..|.+.. |..++.+-..+
T Consensus 16 ~p~~i~~~~P~~g~--~~~~~~i~G~nfg~~----~~~~~v~~~~~~~~v~~~~~~~i~~~vp~~~~~g~~~v~~~~~~ 88 (430)
T 3tc9_A 16 KPVVISEFSPKEGG--LGTRMLLYGENFGSD----ISKIKVTIGGQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILNDE 88 (430)
T ss_dssp SCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEEECTT
T ss_pred CCCEEEEEcCCCCC--CCCEEEEEEEcCCCC----ccceEEEECCEEEEEEEECCCEEEEEeCCCCCCccEEEEEecCC
Confidence 44599999999987 799999999999762 33567899998665444677788999999887 88888776544
No 143
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=73.72 E-value=2.6 Score=29.25 Aligned_cols=19 Identities=16% Similarity=0.120 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 002124 835 IWSVGILEKVILRWRRKGS 853 (964)
Q Consensus 835 r~aa~~IQ~~iR~~~~rr~ 853 (964)
-.+|.+||+.||+|+.++.
T Consensus 6 e~aA~vIQrA~R~yl~~~~ 24 (27)
T 2kxw_B 6 EVSAIVIQRAYRRYLLKQK 24 (27)
T ss_dssp HHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 3588888888888876543
No 144
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=73.69 E-value=0.38 Score=58.87 Aligned_cols=90 Identities=14% Similarity=0.166 Sum_probs=55.7
Q ss_pred ceEeEeeCCCCCCCCCCeEEEEeccccccccc--ccccchhhhcCChHHHH--HHHHcCCCCCCCCCCCCCCcceeeccc
Q 002124 377 LFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQE--VAKCKWSCMFAEVEVPA--EVLADGVLCCRIPPHAVGRVPFYITCS 452 (964)
Q Consensus 377 l~~I~dfSP~wa~~~ggtKVlI~G~~~~~~~~--~~~~~~Ac~fG~veVv~--~LL~~GvlrC~~p~~~~G~TPLhvA~~ 452 (964)
.+.|+.|+|..++..|||.|+|+|..|..... .......+.+|..+..- .......+.|..|+...|..++.+...
T Consensus 541 ~P~ItsI~P~~Gp~~GGT~vTI~G~nf~~~~~~~~~~~~~~V~igg~~C~~~~~~~s~t~I~C~tp~~~~~~~~v~V~v~ 620 (727)
T 2uzx_B 541 LPAIYKVFPNSAPLEGGTRLTICGWDFGFRRNNKFDLKKTRVLLGNESCTLTLSESTMNTLKCTVGPAMNKHFNMSIIIS 620 (727)
T ss_dssp CCEEEEEESSBCCSSCCCEEEEEEECCCEEETTEEESTTCEEEETTEECEECGGGCCSSEEEEECCC-----CCCEEEEE
T ss_pred CCEEeccCCCcccCCCCEEEEEEEecCCCCcccccCCcccEEEECCCccceeeeeccCCEEEEEeCCCCCCCccEEEEEe
Confidence 47999999999999999999999998874210 00123567788764321 123455688999986656556666655
Q ss_pred CCcccchhhhhhhh
Q 002124 453 NRLACSEVREFDYI 466 (964)
Q Consensus 453 ng~~~seVv~feyl 466 (964)
++........|.|.
T Consensus 621 ~~~~~~~~~~FtY~ 634 (727)
T 2uzx_B 621 NGHGTTQYSTFSYV 634 (727)
T ss_dssp CSSCEEEEECCBCC
T ss_pred CCcceecccccccc
Confidence 54422333456664
No 145
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=71.44 E-value=3.2 Score=29.73 Aligned_cols=20 Identities=0% Similarity=-0.145 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhhhcHHHHHH
Q 002124 893 LQKALGRVKSMVQYPEARAQ 912 (964)
Q Consensus 893 ~~~Aa~~iQs~~R~~~AR~q 912 (964)
++.|++.||..||.++.|+.
T Consensus 5 Ee~aA~vIQrA~R~yl~rr~ 24 (31)
T 2l53_B 5 EEVSAMVIQRAFRRHLLQRS 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 36799999999999998865
No 146
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=70.12 E-value=0.54 Score=54.93 Aligned_cols=85 Identities=15% Similarity=0.221 Sum_probs=61.3
Q ss_pred CceEeEeeCCCCCCCCCCeEEEEecccccccccccccchhhhcCChHHHHHHHHcCCCCCCCCCCCC-CCcceeecccCC
Q 002124 376 QLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAV-GRVPFYITCSNR 454 (964)
Q Consensus 376 ~l~~I~dfSP~wa~~~ggtKVlI~G~~~~~~~~~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~-G~TPLhvA~~ng 454 (964)
+...|++|+|..+.. |++|+|.|..|... .....+.||..+..-.-+....+.|.+|.+.. |..++.+-...+
T Consensus 16 ~p~~i~~~~P~~G~~--~t~~~I~G~nFg~d----~~~i~V~~~~~~a~v~~~~~~~i~~~vp~~~~~G~~~v~v~~~~~ 89 (496)
T 3kya_A 16 KPVAISDFTPKEGGA--YQKLLIYGENFGTD----VSKVKVKIGGKDAIVINVKSTYVYCFVPSGAFSGEIEITVGEGEN 89 (496)
T ss_dssp SCCEEEEEECSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEESCGGG
T ss_pred CCcEEEEEcCCCCCC--CCEEEEEeecCCCC----cceeEEEECCEEEEEEEECCCEEEEEECCCCCCCcEEEEEEecCC
Confidence 456999999999976 79999999888763 34678999987664333566788999999876 788887755443
Q ss_pred --cccchhhhhhhhc
Q 002124 455 --LACSEVREFDYIV 467 (964)
Q Consensus 455 --~~~seVv~feyl~ 467 (964)
.+.+ -..|.|..
T Consensus 90 ~~~~~~-~~~F~Y~~ 103 (496)
T 3kya_A 90 AVTTTA-STTFSYEK 103 (496)
T ss_dssp CEEEEC-SSCCEECC
T ss_pred ceEEEe-cceEEEEE
Confidence 1112 24566653
No 147
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=60.51 E-value=0.69 Score=52.21 Aligned_cols=73 Identities=18% Similarity=0.230 Sum_probs=56.4
Q ss_pred CceEeEeeCCCCCCCCCCeEEEEecccccccccccccchhhhcCC----hHHHHHHHHcCCCCCCCCCCCCCCcceeecc
Q 002124 376 QLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAE----VEVPAEVLADGVLCCRIPPHAVGRVPFYITC 451 (964)
Q Consensus 376 ~l~~I~dfSP~wa~~~ggtKVlI~G~~~~~~~~~~~~~~Ac~fG~----veVv~~LL~~GvlrC~~p~~~~G~TPLhvA~ 451 (964)
+...|++|+|..+. .+++|+|.|..|.+. .....++||. .+..-..+....+.|+.|....|..++.+-.
T Consensus 16 ~~~~~~~~~p~~g~--~~~~~~i~g~nfg~~----~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~vp~~~~g~~~i~v~~ 89 (409)
T 3hrp_A 16 QPVTVESFMPVEGK--LREKVIVKGSNFGTD----KSKVKVYFVDEAAERLSTVIGIDNNTLYCLAPRQLPGGNRIKVIV 89 (409)
T ss_dssp SCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEEECSSCEEEEEEEEEETTEEEEECCSCCSEEEEEEEEE
T ss_pred CCcEEEEEcCCCCC--CCcEEEEEeEcCCCC----ccceEEEECCcccceEEEEEEECCCEEEEEECCCCCCcEEEEEEE
Confidence 44699999999986 799999999988863 3466899999 6444444566678899999888877887766
Q ss_pred cCC
Q 002124 452 SNR 454 (964)
Q Consensus 452 ~ng 454 (964)
.++
T Consensus 90 ~~~ 92 (409)
T 3hrp_A 90 DGK 92 (409)
T ss_dssp TTE
T ss_pred CCe
Confidence 554
No 148
>2yrp_A Nuclear factor of activated T-cells, cytoplasmic 4; beta-sandwich, immunoglobulin-like fold, TIG domain, IPT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.94 E-value=2 Score=40.12 Aligned_cols=91 Identities=22% Similarity=0.286 Sum_probs=59.3
Q ss_pred cccCceEeEeeCCCCCCCCCCeEEEEecccccccccc-----c---ccchhhhcCChHHHHHHHHcCCCCCCCCCCC-CC
Q 002124 373 SQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEV-----A---KCKWSCMFAEVEVPAEVLADGVLCCRIPPHA-VG 443 (964)
Q Consensus 373 ~~~~l~~I~dfSP~wa~~~ggtKVlI~G~~~~~~~~~-----~---~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~-~G 443 (964)
|...++.|...|..-++..||-+|.++|..+.....+ . ...|- ++|.+. +.+....+++|..||=. .-
T Consensus 4 ~a~~~P~I~k~s~~s~~v~GG~Ev~Ll~~k~~kd~kV~F~E~~~dG~~~WE-~~a~f~--~d~~~q~aivf~tPpY~~~~ 80 (114)
T 2yrp_A 4 GSSGLPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWE-EEATVN--RLQSNEVTLTLTVPEYSNKR 80 (114)
T ss_dssp CCCSCCEEEEEESSCEETTCCSEEEEEEESCCTTCEEEEECBCTTSCBCCC-CBCCBC--TTTCBTTEEEEECCCCSCCS
T ss_pred CCCCCCEEEEecCcccccCCCCEEEEEecccCCCCEEEEEEECCCCCcceE-EeeEEC--hHHcccccEEEecCCCCCCc
Confidence 4567889999999999999999999999777521110 1 12242 234444 45567788888888822 21
Q ss_pred C-----cceeecccCCcccchhhhhhhhc
Q 002124 444 R-----VPFYITCSNRLACSEVREFDYIV 467 (964)
Q Consensus 444 ~-----TPLhvA~~ng~~~seVv~feyl~ 467 (964)
. |-|++ +.+...+++...|.|+.
T Consensus 81 I~~pV~V~~~l-~~~~rk~Se~~~FtY~P 108 (114)
T 2yrp_A 81 VSRPVQVYFYV-SNGRRKRSPTQSFRFLP 108 (114)
T ss_dssp CSSCEEEEEEE-ECSSSCBCCCEEEEEEC
T ss_pred cCCCeEEEEEE-CCCCCcccCCcCcEEec
Confidence 1 22555 33324468888888875
No 149
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=58.86 E-value=1.1 Score=51.08 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=53.3
Q ss_pred CceEeEeeCCCCCCCCCCeEEEEecccccccccccccchhhhcCChHHHHHHHHcCCCCCCCCCCCC-CCcceeecccC
Q 002124 376 QLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAV-GRVPFYITCSN 453 (964)
Q Consensus 376 ~l~~I~dfSP~wa~~~ggtKVlI~G~~~~~~~~~~~~~~Ac~fG~veVv~~LL~~GvlrC~~p~~~~-G~TPLhvA~~n 453 (964)
+...|++|+|..+.. |++|+|.|.+|.+. .....+.||..+..-.-+....+.|.+|.... |.+.+.+...+
T Consensus 18 ~p~~i~~~~P~~g~~--~~~~~i~G~nfg~~----~~~~~v~~~~~~a~v~~~~~~~i~~~vp~~~~~g~~~v~v~~~~ 90 (433)
T 4hw6_A 18 EEIVVEKFLPTEGRK--GTRVVVYGRNFGND----VSKVKVTIGGYPAKVINVKGESLLCICPSKAYEGDVKVSVVGDD 90 (433)
T ss_dssp SCCEEEEEESSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEEEEEEECSSEEEEECCTTCTTCCEEEEEECTT
T ss_pred CCCEEEEECCCCCCC--CCEEEEEeECCCCC----cceeEEEECCEEEEEEEeCCCEEEEEeCCCCCCCCEEEEEecCC
Confidence 445999999999865 99999999988763 34678899987554323555677899998664 77777765443
No 150
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=54.08 E-value=1.6 Score=55.12 Aligned_cols=22 Identities=14% Similarity=-0.004 Sum_probs=9.9
Q ss_pred HHHHHHHHhHHHHhchHHHHHH
Q 002124 787 LAHSAAIQIQKKFRGWKKRKEF 808 (964)
Q Consensus 787 ~l~~aAv~IQk~~Rg~~~Rk~f 808 (964)
....++..||+.||++..++.+
T Consensus 785 ~~~~sl~~IQ~~ir~f~~fr~~ 806 (995)
T 2ycu_A 785 DFGDSIESVQSFMNAHKEYKKT 806 (995)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444443
No 151
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=45.85 E-value=14 Score=36.77 Aligned_cols=24 Identities=21% Similarity=0.267 Sum_probs=18.1
Q ss_pred HHHHHHHHhHHHHhchHHHHHHHh
Q 002124 787 LAHSAAIQIQKKFRGWKKRKEFLL 810 (964)
Q Consensus 787 ~l~~aAv~IQk~~Rg~~~Rk~f~~ 810 (964)
....||+.||++||.|+.|+.+++
T Consensus 128 ~e~~aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 128 HEEVSAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccccc
Confidence 345688888888888888776654
No 152
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=41.13 E-value=53 Score=41.56 Aligned_cols=43 Identities=12% Similarity=-0.014 Sum_probs=21.9
Q ss_pred hHHHHHHHHHhHHHHhchHHHHH---------HHhhceeeEeechhhhhHHH
Q 002124 785 DGLAHSAAIQIQKKFRGWKKRKE---------FLLIRQRIVKIQAHVRGHQA 827 (964)
Q Consensus 785 ~~~l~~aAv~IQk~~Rg~~~Rk~---------f~~lr~Aai~IQa~~Rg~~a 827 (964)
.+++..+++.||...|+...+++ .+....++..||+.++++..
T Consensus 759 ~~~l~~~~~~iQY~~~a~~L~~WIr~kqa~l~~r~~~~sl~~IQ~ll~~f~~ 810 (1010)
T 1g8x_A 759 EQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKE 810 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHH
Confidence 34566666666654444333222 22223356667777765533
No 153
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=27.75 E-value=29 Score=23.54 Aligned_cols=18 Identities=56% Similarity=0.698 Sum_probs=13.6
Q ss_pred HHHHhHHHHhchHHHHHH
Q 002124 791 AAIQIQKKFRGWKKRKEF 808 (964)
Q Consensus 791 aAv~IQk~~Rg~~~Rk~f 808 (964)
|...||-+||.++.|++-
T Consensus 4 at~LIqdyfRkfkkrke~ 21 (26)
T 2f3y_B 4 ATFLIQEYFRKFKKRKEQ 21 (26)
T ss_pred hhhhHHHHHHHHHHhHHh
Confidence 455788888888888763
No 154
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=26.15 E-value=52 Score=32.67 Aligned_cols=23 Identities=0% Similarity=-0.078 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHH
Q 002124 893 LQKALGRVKSMVQYPEARAQYRR 915 (964)
Q Consensus 893 ~~~Aa~~iQs~~R~~~AR~qy~r 915 (964)
...||..||.+||.++.|+.+++
T Consensus 129 e~~aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 129 EEVSAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccc
Confidence 36799999999999998877765
No 155
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B
Probab=25.78 E-value=21 Score=23.74 Aligned_cols=15 Identities=27% Similarity=0.343 Sum_probs=12.0
Q ss_pred HHHHhHHHHhchHHH
Q 002124 791 AAIQIQKKFRGWKKR 805 (964)
Q Consensus 791 aAv~IQk~~Rg~~~R 805 (964)
|+..||..||.++.|
T Consensus 8 A~llI~d~~r~~k~r 22 (23)
T 3dvk_B 8 AAMMIMDYYKQSKVK 22 (26)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcc
Confidence 677899999887765
Done!