Query 002134
Match_columns 961
No_of_seqs 272 out of 1216
Neff 8.1
Searched_HMMs 46136
Date Thu Mar 28 17:16:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002134.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002134hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02701 alpha-mannosidase 100.0 1E-205 2E-210 1873.5 97.8 957 1-958 90-1050(1050)
2 KOG1958 Glycosyl hydrolase, fa 100.0 2E-194 4E-199 1630.1 64.2 903 1-957 213-1128(1129)
3 KOG1959 Glycosyl hydrolase, fa 100.0 4E-185 8E-190 1551.7 67.1 850 1-960 95-996 (996)
4 PRK09819 alpha-mannosidase; Pr 100.0 6.4E-88 1.4E-92 837.8 76.2 608 2-757 56-708 (875)
5 KOG4342 Alpha-mannosidase [Car 100.0 1E-65 2.2E-70 560.8 46.2 583 4-761 332-933 (1078)
6 PF07748 Glyco_hydro_38C: Glyc 100.0 1.5E-43 3.1E-48 416.8 37.0 433 439-954 1-457 (457)
7 PF01074 Glyco_hydro_38: Glyco 100.0 4.4E-45 9.6E-50 399.3 20.6 224 1-291 49-275 (275)
8 COG0383 AMS1 Alpha-mannosidase 100.0 4.3E-41 9.3E-46 411.8 33.6 536 3-757 248-791 (943)
9 PF09261 Alpha-mann_mid: Alpha 99.9 1E-22 2.2E-27 178.0 5.7 80 296-381 1-80 (80)
10 smart00872 Alpha-mann_mid Alph 99.8 5.5E-21 1.2E-25 166.6 7.9 79 297-381 1-79 (79)
11 COG0383 AMS1 Alpha-mannosidase 99.3 1.8E-13 3.8E-18 169.4 0.0 298 11-383 64-389 (943)
12 PF03065 Glyco_hydro_57: Glyco 97.8 5.2E-05 1.1E-09 86.4 9.0 90 9-99 106-196 (360)
13 COG1543 Uncharacterized conser 95.8 0.025 5.4E-07 63.8 7.9 91 6-97 116-207 (504)
14 PF01522 Polysacc_deac_1: Poly 94.5 0.11 2.4E-06 49.0 7.2 76 15-93 46-122 (123)
15 TIGR03212 uraD_N-term-dom puta 94.4 1.7 3.7E-05 48.0 17.1 88 6-100 99-187 (297)
16 TIGR02764 spore_ybaN_pdaB poly 89.7 1.9 4E-05 44.4 9.5 74 17-93 49-123 (191)
17 TIGR02884 spore_pdaA delta-lac 86.5 3.3 7.2E-05 43.8 9.1 76 16-93 79-155 (224)
18 TIGR02873 spore_ylxY probable 83.1 6.7 0.00014 42.7 9.7 73 17-92 128-201 (268)
19 TIGR03006 pepcterm_polyde poly 81.3 4.8 0.0001 43.7 7.8 86 7-97 51-139 (265)
20 COG1449 Alpha-amylase/alpha-ma 71.8 9.9 0.00022 46.3 7.6 81 12-93 178-262 (615)
21 PF08672 APC2: Anaphase promot 67.3 6.2 0.00014 32.3 3.1 24 12-35 35-58 (60)
22 PRK14581 hmsF outer membrane N 65.3 23 0.00049 43.6 8.8 80 17-98 168-275 (672)
23 KOG4120 G/T mismatch-specific 61.7 30 0.00065 37.5 7.7 71 41-136 212-287 (426)
24 PRK14582 pgaB outer membrane N 45.3 98 0.0021 38.3 9.6 80 17-98 168-275 (671)
25 TIGR03092 SASP_sspI small, aci 38.8 32 0.00069 28.4 2.8 24 3-26 40-63 (65)
26 PRK15394 4-deoxy-4-formamido-L 37.6 1.2E+02 0.0025 33.6 8.0 80 17-99 92-175 (296)
27 PRK12270 kgd alpha-ketoglutara 35.4 1.3E+02 0.0027 38.5 8.3 67 186-261 993-1061(1228)
28 PF10074 DUF2285: Uncharacteri 35.4 7.7 0.00017 35.8 -1.4 28 6-36 75-102 (106)
29 PF14098 SSPI: Small, acid-sol 34.3 45 0.00099 27.7 3.0 24 3-26 41-64 (65)
30 PF06045 Rhamnogal_lyase: Rham 31.7 6.1E+02 0.013 26.4 12.7 30 548-578 15-44 (203)
31 PRK10148 hypothetical protein; 31.6 17 0.00037 35.7 0.3 17 67-83 123-139 (147)
32 PRK02955 small acid-soluble sp 28.1 60 0.0013 27.1 2.7 24 3-26 43-66 (68)
33 PF10549 ORF11CD3: ORF11CD3 do 23.6 61 0.0013 26.3 2.0 26 4-30 29-54 (57)
No 1
>PLN02701 alpha-mannosidase
Probab=100.00 E-value=1e-205 Score=1873.54 Aligned_cols=957 Identities=77% Similarity=1.282 Sum_probs=838.6
Q ss_pred ChHHHHHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCch
Q 002134 1 MSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSA 80 (961)
Q Consensus 1 ~~ff~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~ 80 (961)
|+||++||++++|++|++||+||++||||||||||||+|||++||+||||||++||+|++++||+.|++||||||||||+
T Consensus 90 ~~fl~~Ww~~~~pe~~~~vk~LV~~GrLE~vgGgwvm~DEa~~~~esiI~Ql~~G~~~l~~~fG~~P~~~W~iDpFGhs~ 169 (1050)
T PLN02701 90 MSYLERWWRDASPSKKEAFTKLVKNGQLEIVGGGWVMNDEANSHYFAIIEQITEGNMWLNDTIGVAPKNSWAIDPFGYSS 169 (1050)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHcCCEEEECCceecccccccCHHHHHHHHHhhhHHHHhhcCCCCCcCccCCCCCCCH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceeeeeccchHHHHHHhhccceeEEEeecCCCCCCCceEEeecCCccCCCCCCCCCCCccccccccccc
Q 002134 81 TMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARM 160 (961)
Q Consensus 81 ~~p~ll~~~G~~~~~~~R~~~~~k~~~~~~~~~eF~W~~s~~~~~gs~i~th~~~~y~Y~~p~~c~p~~~~c~~fdf~~~ 160 (961)
+|||||++|||++++|+|++|++|+.|+.++.+||+|+++|++++|++||||+||+|+|++||+|||+|+|||||||.|+
T Consensus 170 ~~P~Ll~~~G~~~~~~~R~~y~~k~~~~~~~~~eF~W~~s~~~~dgs~Ift~~lp~y~Y~~p~~~~p~p~~c~~Fd~~~~ 249 (1050)
T PLN02701 170 TMAYLLRRMGFENMLIQRTHYEVKKELAQNKNLEYIWRQSWDAEETTDIFVHMMPFYSYDIPHTCGPEPAICCQFDFARM 249 (1050)
T ss_pred HHHHHHHhCCCceEEEeccchHHHHHHhhcCCceEEEeCCCCCCCCCEEEEEEccccccCcccccCCCcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhHHHHHHHhHHHHHHHHhcCCC
Q 002134 161 GGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPS 240 (961)
Q Consensus 161 ~g~~~~~c~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~tn~il~~~GdDf~~~~~~~a~~~~~n~~kli~~iN~~~~ 240 (961)
+|++++.|||+++|..++++||++||++|++++++++.+|++|++|+|+||||+|++.++|+.||+||++||+|||++++
T Consensus 250 ~~~~~~~cp~~~~p~~~~~~nv~~r~~~~~~~~~~~s~~~rtn~iL~p~GdDf~~~~~~~a~~~f~n~dkli~~iN~~~~ 329 (1050)
T PLN02701 250 RGFQYELCPWGKHPVETNDENVQERAMKLLDQYRKKSTLYRTNTLLVPLGDDFRYISIDEAEAQFRNYQKLFDYINSNPS 329 (1050)
T ss_pred cccccccCcccCCccccchhHHHHHHHHHHHHHHHhhccccCCeEEEecCCCCCCcchhHHHHHHHhHHHHHHHHhhCcc
Confidence 99888889999999999999999999999999999999999999999999999999888999999999999999999976
Q ss_pred CceEEEeCCHHHHHHHHHHHhhhcccCCCCCCCCCCccCCCccccccccccccCCCceeeeeccchhhhhHHHHHHHHHH
Q 002134 241 LNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLR 320 (961)
Q Consensus 241 ~~~~v~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~lp~~~gDffpya~~~~~ywtGyyTSRp~~K~~~R~~e~~L~ 320 (961)
.+++++|||+++||++++++..+..++.+|+..++....||+++||||||||++++||||||||||++|+++|++|++|+
T Consensus 330 ~~~~i~~ST~~~Yf~~l~~~~~~~~~~~~ge~~~~~~~~~p~~~gDff~Ya~~~~~yWTGyyTSRp~lK~~~R~~e~~L~ 409 (1050)
T PLN02701 330 LKAEVKFGTLEDYFSTLRDEADRINYSRPGEVGSGEVPGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLR 409 (1050)
T ss_pred cCceEEECCHHHHHHHHHhhhccccccccccccccccCCCceecccccccccccccccceeeecHHHHHHHHHHHHHHHH
Confidence 67999999999999999987654455566666655556899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccccCCCChhhHHHHHHHHHHhhhhccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002134 321 ATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLL 400 (961)
Q Consensus 321 ~aE~l~ala~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTs~~~V~~Dy~~rl~~a~~~~~~v~~~al~~L~ 400 (961)
+||+|+++|...+....+..+|....+.|+.|||+|+++|||||||||||++|++||..||.+++..++.+++.|++.|+
T Consensus 410 ~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~~wk~l~~~QhHDaItGTsk~~V~~Dy~~rl~~~~~~~~~~~~~al~~L~ 489 (1050)
T PLN02701 410 AAEILFSFLLGYCRRFQCEKLPTSFSYKLTAARRNLALFQHHDGVTGTAKDHVVVDYGTRMHTSLQDLQIFMSAAVEVLL 489 (1050)
T ss_pred HHHHHHHHHhhhhhhccccCCChhhHHHHHHHHHHHHhhccCcCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999754332223455665456789999999999999999999999999999999999999999999999999998
Q ss_pred cccc-ccCCCCCcccccccccccCCCCcceeeeccCCceeEEEEEcCCCcceeEEEEEEEcCCcEEEEcCCCcEeeEeec
Q 002134 401 GIRE-RYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQIS 479 (961)
Q Consensus 401 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~v~v~~~~~~V~d~~g~~v~~Qi~ 479 (961)
.... +.+.....|+.|+.+.+++.||++.++.+..++...|+|||||+|+|+++|+|+|+.+.+.|+|++|++|++|++
T Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~~~r~~vV~v~V~~~~~~V~d~~g~~v~~Qi~ 569 (1050)
T PLN02701 490 GIRHEKSDQTPSWFEPEQSRSKYDMLPVHKVINLREGKAHRVVFFNPLEQTREEVVMVVVDRPAVCVFDSNWTCVPSQIS 569 (1050)
T ss_pred hccccccccccccccccccccccccccccccccccCCCceEEEEECCCCceeeEEEEEEecCCcEEEEcCCCCEEeEEEe
Confidence 6421 222334568889889999999998777665666789999999999999999999999999999999999999999
Q ss_pred cccccCccccccCceEEEEEEecCCCeeEEEEEEeCccCCCCCCcceeee-cCCCCCCCCCCCccccCCCCceeEeeceE
Q 002134 480 PELRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKY-SSDNSFSCPTPYACSKIEGDVADIRNRHQ 558 (961)
Q Consensus 480 ~~~~~~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ieN~~~ 558 (961)
|.|...........|+|.|.|+||||||++|+|......+....++.+.. .....++++.++.+.....+.++|||+++
T Consensus 570 ~~~~~~~~~~~~~~~~l~F~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~l 649 (1050)
T PLN02701 570 PEWQHDGEKLFTGRHRLYWKASVPALGLETYFIANGNVSCEKAVPAKLKVFNSDDKFPCPEPYSCSKLEGDTVEISNSHQ 649 (1050)
T ss_pred ccccccccccccceEEEEEEEecCCceeEEEEEEEcCCCcccccccccccccccccccccccccccccCCCcEEEecCeE
Confidence 98764322234568999999999999999999987644332222222211 11222333334433333456789999999
Q ss_pred EEEEEccCceEEEEE-ccCCcEEEEEEEEEEeccCCCCceeecCCCCCCccccCCceEEEEECCceEEEEEeecccccCC
Q 002134 559 ILSFDVRHGLLQKIS-HINGSQNVVEEEIDMYSSQGSGAYLFMPNGDAHPITEAGGLMVISKGPLMEEAYSYPRTAWERS 637 (961)
Q Consensus 559 ~v~fd~~~G~l~sl~-~k~g~~~~~~~~~~~Y~~~~sgAYiF~P~~~~~~~~~~~~~~~v~~Gpl~~~v~~~~~~~~~~~ 637 (961)
+|+||++||+|++++ +++|++..+.++|.+|.+++||||+|+|++.+.++......+.+++|||+++|++.++..|+++
T Consensus 650 kl~Fd~~TG~L~si~~~~~g~~~~v~q~f~~Y~s~~SGAYiFrP~~~~~p~~~~~~~~~v~~Gplv~eV~~~~~~~~~~s 729 (1050)
T PLN02701 650 TLGFDVKTGLLRKIKIHKNGSETVVGEEIGMYSSQGSGAYLFKPDGEAQPIVQAGGLVVVSEGPLVQEVHSVPKTKWEKS 729 (1050)
T ss_pred EEEEcCCCCceeEEEecccCceecceeeeeeecCCCCcceEEcCCCCCcccCCCCceEEEEeCCEEEEEEEEeecccCCc
Confidence 999999999999998 5688888999999999999999999999998877766666778999999999999765667788
Q ss_pred ceEEEEEEecCCCccceeeEEEEEEeeeecCCCCCeEEEEEEEeeeCCCCeEEEeCCCCcccccccCCCCCCCcceeecc
Q 002134 638 PISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMP 717 (961)
Q Consensus 638 ~i~q~irLy~~~~~~~~~~iei~~~Vd~~~~~~~~~e~~~rf~t~i~s~~~fyTDsnG~~~~~R~~~~~~pv~~NyYP~~ 717 (961)
+++|++|||++.+.+++..||++|+||++|.+..|||+++||+|+|+|+++||||+|||||+||++|+++|++||||||+
T Consensus 730 ~isQ~iRLY~~~~~~~~~~vE~e~~V~~ip~d~~~kEii~R~~T~i~s~~~FYTDsNG~qm~kR~~~~~~Pv~gNYYPv~ 809 (1050)
T PLN02701 730 PLSRSTRLYHGGKSVQDLSVEKEYHVELLGHDFNDKELIVRFKTDIDNKRVFYSDLNGFQMSRRETYDKIPLQGNYYPMP 809 (1050)
T ss_pred ceEEEEEEecCCCccccceEEEEEEecCcccCCCCcEEEEEEeecccCCCeEEEcCccceeeeecccccCcccccccccc
Confidence 99999999998555555689999999999877789999999999999999999999999999999999999999999999
Q ss_pred ceeEeecCCCceeEEeecCCcceecccCCeEEEEEeeccccCCCCCCCcCccCCceeeEEEEEEEeecccCCcccCCCCc
Q 002134 718 ALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDGRGLGQGVLDNRAMNVVFHILVESNISSTSNSISKPL 797 (961)
Q Consensus 718 s~~~i~D~~~~~ltvltd~~~G~sSl~~G~lElml~Rrl~~DD~rGvge~l~d~~~~~~~~~ll~e~~~~~~~~~~~~~~ 797 (961)
++|||+|+++.|||||||||+||||+++|+|||||||||++||+|||||||+||+++.++|||++|.+.+.+.. .+...
T Consensus 810 s~a~IqD~~~~rltvltdrs~G~sSl~~GqLEiMLhRRLl~DD~rGvge~l~dnk~~~~~f~ll~e~~~~~~~~-~~~~~ 888 (1050)
T PLN02701 810 SLAFLQGSNGQRFSVHSRQSLGVASLKNGWLEIMLDRRLVQDDGRGLGQGVMDNRPMNVVFHLLLESNISSSPP-ASNPL 888 (1050)
T ss_pred ceEEEEcCCCCeEEEEeccCcccccCCCcEEEEEEEeecccccCccccccccccccccceEEEEEecccccCCC-CCCCC
Confidence 99999995458999999999999999999999999999999999999999999999999999999988753323 33333
Q ss_pred ccCcchhhhhccccccccceeeeccCCCCCcCCC-CCCCcCCCCCCCCCceeEEeeecCCCCCCCCCCCCccceeeeeee
Q 002134 798 TLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQP-PPRSFSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQR 876 (961)
Q Consensus 798 ~~~ps~~~~~~~~~l~~p~~~~~~~~~~~~~~~~-~~~~~s~l~~~LP~~vhLltl~~~~~~~~~~~~~~~~r~~~ll~~ 876 (961)
...||+++|.++..|+||+++|+.++........ ...+|+||.++||||+||||||++++.++........++++||||
T Consensus 889 ~~~~Sl~sh~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~lpcD~hlv~lrt~~~~~~~~~~~~~~~~~~~l~r 968 (1050)
T PLN02701 889 PLQPSLLSHRVGAHLNYPMHAFLAKKPQATSVENPQDTSFAPLAKPLPCDLHIVNFKVPRPSKYSQQEAEDPRFGLLLQR 968 (1050)
T ss_pred cCCccHHHHHHHHhhcCCchhhcccCccccccccccccccccccCCCCCcEEEEEeeccCCcccccccCCCccEEEEEEe
Confidence 3349999999999999999999865443322221 137899999999999999999999987542222223568999999
Q ss_pred eccCcccccCCCCccccccccccchhhhcccCccceEEEccccCccccccccCCCCcccCCCCCCceEeccceeeEEEEE
Q 002134 877 RYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQAYKLE 956 (961)
Q Consensus 877 ~~~d~~~~~~~~~~~~~~~~~~v~l~~lf~~~~v~~~~e~sL~~~~~~~~~~~~~~~~~~~~~~~~v~l~PmeIrtf~~~ 956 (961)
+|+||+|+.++..+|++.+.++|+|.+||+++.|.++++||||++++..++++++.+.....+.+.|.|+||||+||+++
T Consensus 969 ~~~d~~~~~~~~~~c~~~~~~~~~~~~lf~~l~~~~~~~tsl~~~~~~~~~~~~~~~~~~~~~~~~i~l~pmei~~~~~~ 1048 (1050)
T PLN02701 969 RGWDSSYCRKGGTQCTTLANEPVNLFDMFKDLAVSKVKATSLNLLHDDAEMLGYRKQAGSAAQEGIVLISPMEIQAYKLD 1048 (1050)
T ss_pred cccCcccccCCCccCcccCCcccchhhhhcccceeeeecccccccccchhhccccccccccCCccceeeccceeeeEEEe
Confidence 99999999998788987655569999999999999999999999999999998887776666778999999999999998
Q ss_pred Ee
Q 002134 957 MR 958 (961)
Q Consensus 957 ~~ 958 (961)
++
T Consensus 1049 ~~ 1050 (1050)
T PLN02701 1049 LR 1050 (1050)
T ss_pred cC
Confidence 74
No 2
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-194 Score=1630.13 Aligned_cols=903 Identities=48% Similarity=0.833 Sum_probs=786.5
Q ss_pred ChHHHHHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCch
Q 002134 1 MSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSA 80 (961)
Q Consensus 1 ~~ff~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~ 80 (961)
||||++||++++|++|++||+||++||||||+|||||||||++||.+||+|+++||+||++++|++|+++|.|||||||+
T Consensus 213 iS~~~~ww~~~~~~kk~a~k~lv~~GqlEIvtGGWVMpDEAn~Hy~~~i~qliEGh~Wl~~~igv~P~s~WaiDPFG~S~ 292 (1129)
T KOG1958|consen 213 ISFLERWWDDASPTKKNAVKRLVKNGQLEIVTGGWVMPDEANSHYFAMIDQLIEGHQWLKNNIGVTPQSGWAIDPFGYSS 292 (1129)
T ss_pred HHHHHHhhhhcChHHHHHHHHHHhcCcEEEEeCccccCcccchhHHHHHHHHhhhhhHHhccCCCCCCcccccCCCCCCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceeeeeccchHHHHHHhhccceeEEEeecCCCCCCCceEEeecCCccCCCCCCCCCCCccccccccccc
Q 002134 81 TMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARM 160 (961)
Q Consensus 81 ~~p~ll~~~G~~~~~~~R~~~~~k~~~~~~~~~eF~W~~s~~~~~gs~i~th~~~~y~Y~~p~~c~p~~~~c~~fdf~~~ 160 (961)
+|||||+++||++++|+|+||.+|+.++..|.+||+|||.|+....++|||||||||+||+||+|||+|+|||||||+||
T Consensus 293 TmpYLL~~ag~~~mlIQRvHYavKk~lA~qk~leF~WRQ~wds~~~tDl~tHmMPFysYDIphTCGPdP~ICCqFDFkRm 372 (1129)
T KOG1958|consen 293 TMPYLLRRAGFENMLIQRVHYAVKKELAQQKSLEFIWRQYWDSTGDTDLLTHMMPFYSYDIPHTCGPDPKICCQFDFKRM 372 (1129)
T ss_pred chHHHHhhcCchhHHHHHHHHHHHHHHHHhcccceeehhhccCCCCcchheeecccccccCCCccCCCCceeeeeecccC
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhHHHHHHHhHHHHHHHHhcCCC
Q 002134 161 GGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPS 240 (961)
Q Consensus 161 ~g~~~~~c~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~tn~il~~~GdDf~~~~~~~a~~~~~n~~kli~~iN~~~~ 240 (961)
+|++++ |||+.+|..|++.||++||++|+|||+|++.+|++|++|+|.||||+|...+||++||.||++||++||+++.
T Consensus 373 pg~~~~-Cpw~vpP~~It~~NVa~rA~~LldQyrKkS~Lfr~nVlLiPlGDDFRy~~~~Ewd~Q~~NY~~LFD~iNs~~~ 451 (1129)
T KOG1958|consen 373 PGGGCE-CPWGVPPEKITDANVAARAELLLDQYRKKSELFRTNVLLIPLGDDFRYDKITEWDQQFDNYQKLFDHINSRPL 451 (1129)
T ss_pred CCCCcC-CCCCCCCeeechhhHHHHHHHHHHHHHHHhhhcccceEEEecCCccccCccHHHHHHHHHHHHHHHHHhcccc
Confidence 999875 9999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CceEEEeCCHHHHHHHHHHHhhhcccCCCCCCCCCCccCCCccccccccccccCCCceeeeeccchhhhhHHHHHHHHHH
Q 002134 241 LNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLR 320 (961)
Q Consensus 241 ~~~~v~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~lp~~~gDffpya~~~~~ywtGyyTSRp~~K~~~R~~e~~L~ 320 (961)
++++++|||++|||+||+++.... .+ ....||+++||||+|||+.++||||||||||++|++.|.+|++||
T Consensus 452 ~nv~aqFGTlsDYF~al~k~~~e~--------~k-g~~~FPtlSGDFFtYaDr~d~YWSGYyTSRPFyK~ldRvLeh~lR 522 (1129)
T KOG1958|consen 452 LNVQAQFGTLSDYFDALDKAYSER--------GK-GQEPFPTLSGDFFTYADRDDHYWSGYYTSRPFYKRLDRVLEHYLR 522 (1129)
T ss_pred cceeeecCCHHHHHHHHHHhhccc--------cC-CCCCCcccccCceeeecccCccceeeeecchHHHHHHHHHHHHHh
Confidence 899999999999999999874311 11 123489999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccccc-CCCChhhHHHHHHHHHHhhhhccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002134 321 ATEMMVALLLGYCQRAQC-EKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVL 399 (961)
Q Consensus 321 ~aE~l~ala~~~~~~~~~-~~~~~~~~~~l~~a~~~l~l~QhHDaItGTs~~~V~~Dy~~rl~~a~~~~~~v~~~al~~L 399 (961)
+||+|+++|...+.+.+. ..++......|++|||+|++||||||||||||++|+.||..||..++..++.++++++..|
T Consensus 523 ~AEIl~s~a~~~~~r~~~~~r~~~~~~~~L~~ARRnL~LFQHHDaITGTaK~~Vv~DYg~rl~~Sl~~~~~v~~~~~~~L 602 (1129)
T KOG1958|consen 523 SAEILFSLALAHAHRVGLAQRIEESNYELLTAARRNLGLFQHHDAITGTAKDAVVVDYGQRLHESLVNLQIVLENALELL 602 (1129)
T ss_pred hHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHhhhhhhcccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987654322222 2456666788999999999999999999999999999999999999999999999999999
Q ss_pred hcccc---ccCCCCCcccccccccccCCCCcceeeeccCCceeEEEEEcCCCcceeEEEEEEEcCCcEEEEcCCCcEeeE
Q 002134 400 LGIRE---RYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQS 476 (961)
Q Consensus 400 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~v~v~~~~~~V~d~~g~~v~~ 476 (961)
++... +++.....+++++.+.+.+.+|.+.++.++. .+..||+||||.+.|.++|.|.|+.+.|.|.+..|.+|++
T Consensus 603 l~~~~~~y~~~~~~~~~emd~~r~~~~~~pek~~~~~~~-~~~~vvlfN~l~q~R~evv~i~V~sp~V~V~~d~g~pv~~ 681 (1129)
T KOG1958|consen 603 LGKDSETYNSDPSHSFIEMDDIRDSEDSLPEKTVIGLSS-GPRSVVLFNPLEQEREEVVTIRVNSPEVSVLDDGGVPVEA 681 (1129)
T ss_pred hcCCccccccCCCCCceehhhcccCCCcCcccceeeccC-CCceEEEeccchhhhhccEEEEecCCeeEEEcCCCceeeE
Confidence 87652 2334455788888899999999988888754 4589999999999999999999999999999999999999
Q ss_pred eeccccccCcccc-ccCceEEEEEEecCCCeeEEEEEEeCccCCCCCCcceeeecCCCCCCCCCCCccccCCC--CceeE
Q 002134 477 QISPELRHGKSKI-FTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKIEG--DVADI 553 (961)
Q Consensus 477 Qi~~~~~~~~~~~-~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i 553 (961)
||.|+|....++. ..+.|+|.|.|.|||||..+|++..+...+....++ ...++.+...++++.... +..++
T Consensus 682 Qispvw~~~~tk~~~~~~~~l~f~a~vpplgl~v~~~~~~~~~~~~~l~s-----~~~~~~~~~~~s~~~~~~~~~~s~~ 756 (1129)
T KOG1958|consen 682 QISPVWQDTKTKTIKPGSYRLSFKATVPPLGLMVLRIDSGGLTEHAKLPS-----KDTSFPAWDLGSSSTIGDSRELSTL 756 (1129)
T ss_pred eeccceeccccceeecceeEEEEEEecccceeeEEEeeccCccccccccc-----CCCCcccCCCccceeecCcccccee
Confidence 9999997544433 344899999999999999999998764332222221 122344444444333221 34589
Q ss_pred eeceEEEEEEccCceEEEEEc-cCCcEEEEEEEEEEecc----CCCCceeecCCCCCCcccc-CCceEEEEECCceEEEE
Q 002134 554 RNRHQILSFDVRHGLLQKISH-INGSQNVVEEEIDMYSS----QGSGAYLFMPNGDAHPITE-AGGLMVISKGPLMEEAY 627 (961)
Q Consensus 554 eN~~~~v~fd~~~G~l~sl~~-k~g~~~~~~~~~~~Y~~----~~sgAYiF~P~~~~~~~~~-~~~~~~v~~Gpl~~~v~ 627 (961)
+|++.++.||+++|+|+++.. .+++...+...|..|.. ..||||+|+|+|+++++.. ..+.+.+ +|||+++|.
T Consensus 757 ~~~~~~l~fd~~~G~i~~~~~~~D~~~~~~q~~f~~y~~~~~~~~sgaylf~p~G~a~~~i~~~~p~v~v-~g~L~qev~ 835 (1129)
T KOG1958|consen 757 RNEYFELRFDPETGTIKSINSLSDNKHFESQVSFSNYGERISGDESGAYLFLPDGNAKPIIELQWPHVRV-KGPLVQEVS 835 (1129)
T ss_pred eccceeEEeccccchhhhhhhcccCCCcccceeeccccccccCCCCceEEEccCCCCCCceecCCCeEEe-ecceeeeec
Confidence 999999999999999999884 46776667778888864 3589999999999998554 4456666 999999999
Q ss_pred EeecccccCCceEEEEEEecCCCccceeeEEEEEEeeeecCCCCCeEEEEEEEeeeCCCCeEEEeCCCCcccccccCCCC
Q 002134 628 SYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKI 707 (961)
Q Consensus 628 ~~~~~~~~~~~i~q~irLy~~~~~~~~~~iei~~~Vd~~~~~~~~~e~~~rf~t~i~s~~~fyTDsnG~~~~~R~~~~~~ 707 (961)
...++.+.... |.+|+|.|.. +|+++.||... ..|+|+++||.|+++++..||||+||+||+||++..+.
T Consensus 836 ~~~~~v~~~~~--~~~~~~~G~~------vei~~~vdi~~--~~n~Ela~R~st~vds~~~FyTDlnG~Q~~kR~~~~Kl 905 (1129)
T KOG1958|consen 836 QFLKNVLHRLS--QNVRGYSGEE------VEISNSVDIRK--EDNTELAMRFSTDVDSGDLFYTDLNGMQMIKRRRLDKL 905 (1129)
T ss_pred cccchHHHhch--hheeccCCcc------eeeeceeeccc--ccchhhhhhhhhcccCCceeeeccchhhhhhhhhcccC
Confidence 88766665433 8999999974 99999999763 47999999999999999999999999999999999999
Q ss_pred CCCcceeeccceeEeecCCCceeEEeecCCcceecccCCeEEEEEeeccccCCCCCCCcCccCCceeeEEEEEEEeeccc
Q 002134 708 PLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDGRGLGQGVLDNRAMNVVFHILVESNIS 787 (961)
Q Consensus 708 pv~~NyYP~~s~~~i~D~~~~~ltvltd~~~G~sSl~~G~lElml~Rrl~~DD~rGvge~l~d~~~~~~~~~ll~e~~~~ 787 (961)
|+++|||||++++||+|.+ .||++++.+++|++||.+|+||||+|||+.+||+||||||+.||+++...|+|++|...+
T Consensus 906 PlQaNyYPmpt~a~Iq~~~-~RlsihS~q~lGvssL~sG~iEIm~DRrL~~DD~rGLgqGv~DNk~t~~~frlv~e~~~s 984 (1129)
T KOG1958|consen 906 PLQANYYPMPTAAFIQDAK-QRLSIHSAQSLGVSSLESGQIEIMLDRRLNQDDGRGLGQGVIDNKPTDMKFRLVLESLNS 984 (1129)
T ss_pred cccceeecccceeeeecCC-ceEEEEeecccCccccccceEEEEecccccCCCCccccccccccchhhheeeeeeccccc
Confidence 9999999999999999996 899999999999999999999999999999999999999999999999999999998876
Q ss_pred CCcccCCCCcccCcchhhhhccccccccceeeeccCCCCCcCCCCCCCcCCCCCCCCCceeEEeeecCCCCCCCCCCCCc
Q 002134 788 STSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQPPPRSFSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDD 867 (961)
Q Consensus 788 ~~~~~~~~~~~~~ps~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~LP~~vhLltl~~~~~~~~~~~~~~~ 867 (961)
+..+....++.. ||+++|.+++.|+||++.|+.+.+.. .. ....|.++..+||||+||+|++++.+.+ ...
T Consensus 985 ~~~p~e~~~~~~-ps~~ah~a~~~l~yP~~~f~~~~pk~--i~-~~g~~~~~~~~lpcDl~lvt~rtl~~~~-----~~~ 1055 (1129)
T KOG1958|consen 985 AQDPTENSRVSY-PSLAAHLASQSLNYPLMKFIYAEPKK--IE-DQGIFEPLNLSLPCDLHLVTFRTLESSK-----AAE 1055 (1129)
T ss_pred ccCchhcCCCCC-hhhhhhcccceecCCchhhcccCCCC--hh-hccccccccCCCccceeEEEeeeccCcc-----ccc
Confidence 333333333433 99999999999999999988544322 11 1456888999999999999999998754 245
Q ss_pred cceeeeeeeeccCcccccCCCCccccccccccchhhhcccCccceEEEccccCccccccccCCCCcccCCCCCCceEecc
Q 002134 868 SRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDDIGMLGYPEQLEDVSQDGQVTIAP 947 (961)
Q Consensus 868 ~r~~~ll~~~~~d~~~~~~~~~~~~~~~~~~v~l~~lf~~~~v~~~~e~sL~~~~~~~~~~~~~~~~~~~~~~~~v~l~P 947 (961)
.|+++||||.+.||+++.++. |. ..++++.+|+.+ +.+++.|+|++++...... +.....++|
T Consensus 1056 ~~~~lil~R~~~~c~~~~~g~--c~---~~ki~~~~ll~~--~~~v~~tsLs~l~~~~~~~----------~~~~~~~~p 1118 (1129)
T KOG1958|consen 1056 KRAALILHRHATDCRSQKKGT--CG---QLKISVMDLLIK--AKSVKKTSLSLLQEVGGII----------GVEEQELSP 1118 (1129)
T ss_pred ccceeeeeecccccccccccc--cc---cccCcHHHHHHH--HHhhchhhHHhhhhcccCC----------Ccccccccc
Confidence 789999999999999977765 75 458999999998 8999999999998754322 223566799
Q ss_pred ceeeEEEEEE
Q 002134 948 MEIQAYKLEM 957 (961)
Q Consensus 948 meIrtf~~~~ 957 (961)
|||++|++.+
T Consensus 1119 me~~~~l~~~ 1128 (1129)
T KOG1958|consen 1119 MEISAFLTSL 1128 (1129)
T ss_pred cccccccccc
Confidence 9999998765
No 3
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.5e-185 Score=1551.65 Aligned_cols=850 Identities=30% Similarity=0.509 Sum_probs=700.2
Q ss_pred ChHHHHHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcC--CCCcccEeeCCCCC
Q 002134 1 MSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIG--FIPKNSWAIDPFGY 78 (961)
Q Consensus 1 ~~ff~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG--~~p~v~W~iDpFGh 78 (961)
++||.|||++|++++|+.||+||++||||||||||||||||++||.++||||++||+||.++|| .+|++|||||||||
T Consensus 95 ~aFF~rWW~~qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG~cgrPrvgWqIDPFGH 174 (996)
T KOG1959|consen 95 TAFFARWWNEQSETQKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFGECGRPRVGWQIDPFGH 174 (996)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhcccCCcceeeeeCCCCc
Confidence 5899999999999999999999999999999999999999999999999999999999999999 79999999999999
Q ss_pred chHHHHHHHHcCCceeeeeccchHHHHHHhhccceeEEEeecCCCCCCCceEEeecCCccCCCCCCCCCCCccccccccc
Q 002134 79 SATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFA 158 (961)
Q Consensus 79 s~~~p~ll~~~G~~~~~~~R~~~~~k~~~~~~~~~eF~W~~s~~~~~gs~i~th~~~~y~Y~~p~~c~p~~~~c~~fdf~ 158 (961)
|+.||+||++|||++++|+||||++|..|..++.|||+|++|.+.+..++||||+|+. +| +|+|+|| ||..
T Consensus 175 SreqAslfAqmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n-~Y------~~P~gfc--~dv~ 245 (996)
T KOG1959|consen 175 SREQASLFAQMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYN-HY------SPPPGFC--FDVL 245 (996)
T ss_pred chHHHHHHHHhCccchheeecchhhHHHHHhhccceEEeecCccccchhhhhhhcccc-CC------CCCCCce--eccc
Confidence 9999999999999999999999999999999999999999999988899999999986 66 3678999 7753
Q ss_pred ccCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhHHHHHHHhHHHHHHHHhcC
Q 002134 159 RMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSN 238 (961)
Q Consensus 159 ~~~g~~~~~c~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~tn~il~~~GdDf~~~~~~~a~~~~~n~~kli~~iN~~ 238 (961)
+- ..|..|+| .+.++||++|++.|++..+.++.+|||||||+||||||+| ++|..||+||||||+|+|+.
T Consensus 246 c~------d~Pi~D~~-~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY---~~A~v~fknmDkLI~yVN~~ 315 (996)
T KOG1959|consen 246 CG------DDPIIDGP-RSYDYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQY---ENANVWFKNMDKLIKYVNER 315 (996)
T ss_pred cC------CCCCCCCC-CCCCccHHHHHHHHHHHHHHhHhheecceEEEeccCCcee---hhhhHHHhhHHHHHHHhhhh
Confidence 21 12444443 4788999999999999999999999999999999999999 56999999999999999976
Q ss_pred C--CCceEEEeCCHHHHHHHHHHHhhhcccCCCCCCCCCCccCCCccccccccccccCCCceeeeeccchhhhhHHHHHH
Q 002134 239 P--SLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLE 316 (961)
Q Consensus 239 ~--~~~~~v~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~lp~~~gDffpya~~~~~ywtGyyTSRp~~K~~~R~~e 316 (961)
. ...++|.||||+||++++++. +..||+++.||||||++++.||||||||||.+|++.|.++
T Consensus 316 qa~gs~vnv~YSTpscYl~alh~~----------------~~Twp~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s 379 (996)
T KOG1959|consen 316 QADGSKVNVFYSTPSCYLNALHAA----------------NQTWPVKTDDFFPYASEPHSYWTGYFTSRPALKRFERDGS 379 (996)
T ss_pred hcCCceEEEEEcChHHHHHHHHHh----------------cCcccccccccCcCCCCCCcceeeeccccHHHHHHHhhhh
Confidence 3 348999999999999999974 2689999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccccccCCCChhhHHHHHHHHHHhhhhccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002134 317 QTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAI 396 (961)
Q Consensus 317 ~~L~~aE~l~ala~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTs~~~V~~Dy~~rl~~a~~~~~~v~~~al 396 (961)
++|++|++|.++|... . . .....|+.++++|++.|||||||||+|+||.+||+++|..|+..|+.++..++
T Consensus 380 ~~lq~akQL~~la~l~-----~-~---~~~~dl~~Lream~i~QHHDAVTGTekq~Va~DY~r~La~g~~~~e~~~~~aL 450 (996)
T KOG1959|consen 380 HYLQVAKQLSVLAGLS-----S-T---EQGPDLDYLREAMAIMQHHDAVTGTEKQHVADDYARRLADGILGAEKLARDAL 450 (996)
T ss_pred HHHHHHHHHhhhcCCC-----c-c---ccCccHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998542 1 1 11346888999999999999999999999999999999999999999999999
Q ss_pred HHHhccccccCCCCCcccccccccccCCCCcceeeeccCCceeEEEEEcCCCcceeEEEEEEEcCCcEEEEcCCCcEeeE
Q 002134 397 EVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQS 476 (961)
Q Consensus 397 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~v~v~~~~~~V~d~~g~~v~~ 476 (961)
..|..... ..|..|.. .|.+.||.++ ...+...|+|||||+|.++++|+|||..++++|+|+.|++|++
T Consensus 451 ~~lt~~~~------~~f~~C~~-lNiS~C~~t~----~~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~S 519 (996)
T KOG1959|consen 451 RKLTNLPN------GEFQSCLL-LNISECAFTK----DGADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRTVPS 519 (996)
T ss_pred HHhhCCCC------ccchhhhh-hccccCCCCc----CCcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCCccc
Confidence 99986431 24666653 2455566542 2345788999999999999999999999999999999999999
Q ss_pred eecccccc---CccccccCceEEEEEEecCCCeeEEEEEEeCccCCCCCCcceeeecCCCCCCCCCCCccccCCCCceeE
Q 002134 477 QISPELRH---GKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADI 553 (961)
Q Consensus 477 Qi~~~~~~---~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 553 (961)
|++|.... .........++|+|.|.|||+|+++|+|++.+... ....+ ..+.+ .+.......|
T Consensus 520 qivp~~~~~~al~~~~~~~~~eLvf~asvpplg~aty~i~k~~~~~----~~~~~--~~~~i--------~~~~~n~~~V 585 (996)
T KOG1959|consen 520 QIVPVPWQVLALESRNNDTKHELVFKASVPPLGIATYFIKKVASTE----RGSAS--HVRNI--------KKRESNATEV 585 (996)
T ss_pred ceeccchhhhhhhccccCCCceEEEEEEecCccceEEEEeecCccc----ccccc--ccccc--------ccccCcceEe
Confidence 99997532 12233466899999999999999999998654321 10000 00000 1122334789
Q ss_pred eeceEEEEEEccCceEEEEE-ccCCcEEEEEEEEEEecc-------CCCCceeecCCCCCCccccCCceEEEEECCceEE
Q 002134 554 RNRHQILSFDVRHGLLQKIS-HINGSQNVVEEEIDMYSS-------QGSGAYLFMPNGDAHPITEAGGLMVISKGPLMEE 625 (961)
Q Consensus 554 eN~~~~v~fd~~~G~l~sl~-~k~g~~~~~~~~~~~Y~~-------~~sgAYiF~P~~~~~~~~~~~~~~~v~~Gpl~~~ 625 (961)
+|+++++.||.++|.++++. +.+|....+.|+|.+|.+ +.||||+|+|...+.++.+....+.|+.|||+.|
T Consensus 586 ~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~n~~q~SgAYiFRp~~~~~~~~~~~vel~vv~G~LV~E 665 (996)
T KOG1959|consen 586 GNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRGDNDKQASGAYIFRPGQADIPIVSDQVELTVVDGPLVKE 665 (996)
T ss_pred ccceEEEEEcCCCCceEEEEecccCcceeeeeeeEEEEeecCCcCCccCcceEecCCCCCccccccceEEEEecCchHHH
Confidence 99999999999899999988 446888899999999964 3499999999333445555556789999999999
Q ss_pred EEEeecccccCCceEEEEEEecCCCccceeeEEEEEEeeeecC-CCCCeEEEEEEEeeeCCCCeEEEeCCCCcccccc--
Q 002134 626 AYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSH-NFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRE-- 702 (961)
Q Consensus 626 v~~~~~~~~~~~~i~q~irLy~~~~~~~~~~iei~~~Vd~~~~-~~~~~e~~~rf~t~i~s~~~fyTDsnG~~~~~R~-- 702 (961)
|++.+ +.||+|+||||+|.+ ++|+||.|+|||. +..|||+++||+|+|++++.|||||||+||+||.
T Consensus 666 VhQ~f-----~~wiSQviRvy~g~~-----~~E~Ew~VGpIp~~d~~gkEvVtr~~t~i~S~g~fYTDSNGRe~~kR~~d 735 (996)
T KOG1959|consen 666 VHQQF-----NPWISQVIRVYEGKN-----HVEFEWLVGPIPIDDGIGKEVVTRFSTEISSNGVFYTDSNGREMIKRVRD 735 (996)
T ss_pred HHHHH-----HHHHhheeEecCCCc-----ceEEEEEecceecCCCccceEEEEeccccccCceEEecCcHHHHHHHHhc
Confidence 99874 357999999999998 7999999999996 5689999999999999999999999999999994
Q ss_pred ---cCC---CCCCCcceeeccceeEeecCCCceeEEeecCCcceecccCCeEEEEEeeccccCCCCCCCcCccCCcee--
Q 002134 703 ---TYD---KIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDGRGLGQGVLDNRAM-- 774 (961)
Q Consensus 703 ---~~~---~~pv~~NyYP~~s~~~i~D~~~~~ltvltd~~~G~sSl~~G~lElml~Rrl~~DD~rGvge~l~d~~~~-- 774 (961)
+|. ++|++||||||++.+||+|++ .||+||+||+||+||+.||+||||||||++.||+|||||+|+|+...
T Consensus 736 ~r~~~~~~~~epiAGNYYPvt~~i~lqD~~-~rl~vL~DRAqGgsSl~dG~lElMLHRRl~~DD~~Gv~EaLnEt~~~~~ 814 (996)
T KOG1959|consen 736 KREDFVLDVNEPIAGNYYPVTSRIYLQDSK-KRLSVLNDRAQGGSSLKDGQLELMLHRRLLNDDGRGVGEALNETVYGHA 814 (996)
T ss_pred ccCCCccccCccccccccccceeeEEecCC-ceEEEEeecccCCccccCCeEEEEeeehhhcccccccchhccccccccc
Confidence 232 689999999999999999996 89999999999999999999999999999999999999999997432
Q ss_pred --eE--EEEEEEeecccCCcccCCCCcccCcchhhhhccccccccceeeeccCCCCCcCC-CCC--CCcCCCCCCCCCce
Q 002134 775 --NV--VFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQ-PPP--RSFSPLAGSLPCDL 847 (961)
Q Consensus 775 --~~--~~~ll~e~~~~~~~~~~~~~~~~~ps~~~~~~~~~l~~p~~~~~~~~~~~~~~~-~~~--~~~s~l~~~LP~~v 847 (961)
.. ++.+++..... .+... .+.+.+++..|.+.|+++.+...+.. ... ..|++ ...||.+|
T Consensus 815 gL~~rGk~~~~l~~~~d--~a~~~----------~r~~~~ei~~P~~~~f~~~~~~~~~~~~s~~~~~f~~-~~~lP~~v 881 (996)
T KOG1959|consen 815 GLIARGKLYVLLDKAGD--GATGW----------RRLAEQEIHLPLWKFFSKPEGGEALNSLSIPGSAFSG-SYDLPQSV 881 (996)
T ss_pred ceEEeeeEEEEEecccc--cchhh----------hhhhhhhcccHHHHHhhcCCCccchhhcCCCcccccc-ccCCCcce
Confidence 22 23333432211 11111 12345688889999988765443322 112 23666 56899999
Q ss_pred eEEeeecCCCCCCCCCCCCccceeeeeeeeccCcccccCCCCccccccccccchhhhcccCccceEEEccccCccccccc
Q 002134 848 HIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDDIGM 927 (961)
Q Consensus 848 hLltl~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~~~~~~~~~~v~l~~lf~~~~v~~~~e~sL~~~~~~~~~ 927 (961)
|||||+.|++..+ |||.+|+ | +.+|+. ..+.+++|+|++||..++|.+|+||||+++....++
T Consensus 882 hLlTLe~~~~~~v------------LlRleh~---~-e~gED~-~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~m 944 (996)
T KOG1959|consen 882 HLLTLEEWSKDEV------------LLRLEHL---Y-EVGEDS-ELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSDM 944 (996)
T ss_pred eeeecccCCCCce------------Eeeehhh---h-hccccc-ccCcceEEEhHHhhcccCeeEEEEeeccCccChhhh
Confidence 9999999986543 3444443 2 333332 123356899999999999999999999888776544
Q ss_pred --cCCCCcc-c--------------CCC--CCCceEeccceeeEEEEEEeeC
Q 002134 928 --LGYPEQL-E--------------DVS--QDGQVTIAPMEIQAYKLEMRPN 960 (961)
Q Consensus 928 --~~~~~~~-~--------------~~~--~~~~v~l~PmeIrtf~~~~~~~ 960 (961)
.+|.+.. + +.. ....|+|.|||||||+|+++++
T Consensus 945 kr~k~~~~~~G~~~~~~~~~~s~~~p~~~~~~~~vtL~PmeIRTfii~~~~~ 996 (996)
T KOG1959|consen 945 KRFKFHWDVSGEKPSGVEYSTSRHKPLDKTSEFIVTLHPMEIRTFIIKFQQK 996 (996)
T ss_pred hhhccccCCCCCCCCCccccccCCCCCCcccceEEEEeccEEEEEEEEEecC
Confidence 4444431 1 111 1237999999999999998764
No 4
>PRK09819 alpha-mannosidase; Provisional
Probab=100.00 E-value=6.4e-88 Score=837.78 Aligned_cols=608 Identities=19% Similarity=0.245 Sum_probs=483.9
Q ss_pred hHHHHHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchH
Q 002134 2 SYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSAT 81 (961)
Q Consensus 2 ~ff~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~ 81 (961)
++++.|| +.+|+++++||+||++||| ++||||||+||+++||||+||||++||+|+ ++||..|++||+|||||||++
T Consensus 56 ~~l~~~~-~~~Pe~~~~ik~lV~~Grl-~~G~W~v~~D~~l~sgEsliRqll~G~~~~-~~fG~~~~vgwlpD~FG~s~~ 132 (875)
T PRK09819 56 SLLEDYL-AVKPEDKERVKKLVQAGKL-IIGPWYTQTDQLVVSGESIVRNLLYGIRDC-REFGEPMKIGYLPDSFGQSGQ 132 (875)
T ss_pred HHHHHHH-HhChHHHHHHHHHHHcCCE-eECcEEeecccccCCHHHHHHHHHHHHHHH-HHcCCCCceeeecCCCCCcHH
Confidence 5677788 6789999999999999999 578888999999999999999999999998 689999999999999999999
Q ss_pred HHHHHHHcCCceeeeeccchHHHHHHhhccceeEEEeecCCCCCCCceEEeecCCccCCCCCCCCCCCcccccccccccC
Q 002134 82 MAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMG 161 (961)
Q Consensus 82 ~p~ll~~~G~~~~~~~R~~~~~k~~~~~~~~~eF~W~~s~~~~~gs~i~th~~~~y~Y~~p~~c~p~~~~c~~fdf~~~~ 161 (961)
|||||++|||+++++||+... ....+..+|+|+ |+|||+||||++|. +|.. |.
T Consensus 133 lPqIl~~~Gi~~~~~wr~~~~----~~~~~~~~F~W~----g~DGs~V~t~~~~~-~Y~~----g~-------------- 185 (875)
T PRK09819 133 MPQIYNGFGITRTLFWRGVSD----RHGTDKTEFLWQ----SDDGSEVLAQQLPL-GYAI----GK-------------- 185 (875)
T ss_pred HHHHHHhCCCCeEEEEecccc----cccCCCceEEEE----CCCCCeEEEEECcc-cccc----CC--------------
Confidence 999999999999999996421 111257899999 77899999999984 5531 10
Q ss_pred ccccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhHHHHHHHhHHHHHHHHhcCCCC
Q 002134 162 GFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSL 241 (961)
Q Consensus 162 g~~~~~c~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~tn~il~~~GdDf~~~~~~~a~~~~~n~~kli~~iN~~~~~ 241 (961)
..+.+..+++++++.+++.+++++ .++++|+|+|+|+++.. +||.++|+.+|+...
T Consensus 186 ------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~G~d~~p~~--------~~~~e~i~~~~~~~~- 241 (875)
T PRK09819 186 ------------YLPEDEEELKKRLDEYFGVLEKKS---STKNILLPNGHDQMPLQ--------KNLFEVMDKLNEIYP- 241 (875)
T ss_pred ------------CCCcCHHHHHHHHHHHHHHHhhcC---CCCcEEEecCCCCCccc--------ccHHHHHHHHHhhCC-
Confidence 012456788899999888888776 78999999999997742 367778888887643
Q ss_pred ceEEEeCCHHHHHHHHHHHhhhcccCCCCCCCCCCccCCCccccccccccccCCCceeeeeccchhhhhHHHHHHHHHHH
Q 002134 242 NAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRA 321 (961)
Q Consensus 242 ~~~v~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~lp~~~gDffpya~~~~~ywtGyyTSRp~~K~~~R~~e~~L~~ 321 (961)
.+++++||+++||+++++.. ..||+++|||+.-. ..++|+||||||+.+|++||++|.+|+.
T Consensus 242 ~~~~~~st~~~yf~~l~~~~----------------~~lp~~~GEl~~~~--y~~~HrG~~TSr~~iK~~nr~~E~~L~~ 303 (875)
T PRK09819 242 EREFVISRFENVFEKLEKQR----------------DNLPTLKGEFIDGK--YMRVHRSIFSTRMDIKIANARIENKIVN 303 (875)
T ss_pred CCcEEECCHHHHHHHHHhhc----------------CCCCeeeeecCCCc--cccccCCccccHHHHHHHHHHHHHHHHH
Confidence 47899999999999998642 46999999998411 1357899999999999999999999984
Q ss_pred -HHHHHHHHhhcccccccCCCChhhHHHHHHHHHHhhhhccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002134 322 -TEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLL 400 (961)
Q Consensus 322 -aE~l~ala~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTs~~~V~~Dy~~rl~~a~~~~~~v~~~al~~L~ 400 (961)
+|+|+++|... |..|| .+.|+++|+.|+++||||+||||++++|++|+..|+.++.+.++.+++.+++.|+
T Consensus 304 ~~E~l~~la~~~-----g~~yp---~~~l~~~Wk~ll~nq~HD~i~G~sid~V~~d~~~r~~~~~~~~~~l~~~~l~~l~ 375 (875)
T PRK09819 304 VLEPLASIAYSL-----GFEYP---HGLLEKIWKEMFKNHAHDSIGCCCSDTVHRDIVARYKLAEDLADNLLDFYMRKIA 375 (875)
T ss_pred HhchHHHHHHHc-----CCCCC---HHHHHHHHHHHHHhcCCCcccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998642 55688 6789999999999999999999999999999999999999999999999999886
Q ss_pred ccccccCCCCCcccccccccccCCCCcceeeeccCCceeEEEEEcCCCcceeEEEEEEE--cCCcEEEEcCCCcEeeEee
Q 002134 401 GIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIV--NRPDITVLDSNWTCVQSQI 478 (961)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~v~v--~~~~~~V~d~~g~~v~~Qi 478 (961)
... ..++...++||||++|+|+++|++++ +.+.+.|.|.+|+.|++|+
T Consensus 376 ~~i------------------------------~~~~~~~~~vfN~l~~~r~~~v~i~~~~~~~~~~~~d~~g~~v~~~v 425 (875)
T PRK09819 376 DNM------------------------------PQSDADKLTVFNLLPYEREEVINTTVYLPASQFTLRDDRGNPLPYTI 425 (875)
T ss_pred Hhc------------------------------CcCCCCEEEEEcCCCccceeEEEEEEEeccCCEEEECCCCCEeeEEE
Confidence 531 01234679999999999999999877 4567899999999999999
Q ss_pred ccccccC-----------ccccccCceEEEEEE-ecCCCeeEEEEEEeCccCCCCCCcceeeecCCCCCCCCCCCccccC
Q 002134 479 SPELRHG-----------KSKIFTGRHRLHWKA-TIPALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKI 546 (961)
Q Consensus 479 ~~~~~~~-----------~~~~~~~~~~l~f~a-~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (961)
....... ........+.+.|.+ +||||||++|.+...... +... ..
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~vP~lG~~~~~i~~~~~~-----~~~~-----------------~~ 483 (875)
T PRK09819 426 REKRDIDPGLLDRQIVHYGNYDPFMEFDIQINVQILPAMGYRTLYIELNEEG-----NVIE-----------------PK 483 (875)
T ss_pred eeccccccchhhcceeccCCCCceEEEEEEEEECCCCCcccEEEEEEeCCcc-----cccc-----------------cc
Confidence 7432110 000001256788885 899999999998754221 0000 01
Q ss_pred CCCceeEeeceEEEEEEccCceEEEEE-ccCCcEEEEEEEEEEeccC--CCCceeecCCCCCCccccC--CceEEEEECC
Q 002134 547 EGDVADIRNRHQILSFDVRHGLLQKIS-HINGSQNVVEEEIDMYSSQ--GSGAYLFMPNGDAHPITEA--GGLMVISKGP 621 (961)
Q Consensus 547 ~~~~~~ieN~~~~v~fd~~~G~l~sl~-~k~g~~~~~~~~~~~Y~~~--~sgAYiF~P~~~~~~~~~~--~~~~~v~~Gp 621 (961)
......|||++|+|+||+ +|.|+ |. +++|+++. ++..|.+. .++||+|.|......+... ...+.+++||
T Consensus 484 ~~~~~~ieN~~~~v~i~~-~G~l~-l~dk~~gr~~~---~~~~~~d~~d~gD~yd~~p~~~d~~~~~~~~~~~~~v~~~~ 558 (875)
T PRK09819 484 SSAEGIIENEFYQITLNE-NGTLT-IVDKKSGKTYD---RQLIIEENGDDGDEYDYSPPREDWVITSAEAVPSVEISHSA 558 (875)
T ss_pred ccccceEecCcEEEEEec-CCcEE-EEECCCCcEEe---ceEEEEecCcCCCCcccCCCCCCCEEeccCCcceEEEEEcC
Confidence 224568999999999997 69995 66 45788752 45566654 3799999997655443332 2356778899
Q ss_pred ceEEEEEeeccc-------------ccCCceEEEEEEecCCCccceeeEEEEEEeeeecCCCCCeEEEEEEEeeeCCCCe
Q 002134 622 LMEEAYSYPRTA-------------WERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRI 688 (961)
Q Consensus 622 l~~~v~~~~~~~-------------~~~~~i~q~irLy~~~~~~~~~~iei~~~Vd~~~~~~~~~e~~~rf~t~i~s~~~ 688 (961)
+++++.+..... ...+.|+|+++|+++++ +|+|+++|||.. .+|.+.+.|+++|.+..+
T Consensus 559 ~~~~~~i~~~~~~p~~~~~r~~~~~~~~~~i~~~i~L~~~s~-----~i~~~~~vdw~~---~~~~Lrv~fp~~i~~~~~ 630 (875)
T PRK09819 559 WQSRAVIRYRLAVPKNLEERAAGQKTGRMPVKLVVTLSKNSR-----RIDFDVNLDNQA---DDHRLRVLFPTEIASKFS 630 (875)
T ss_pred CeEEEEEEEEEeCCcChhhHhhccccceEEEEEEEEEecCCC-----EEEEEEEEeccc---cceEEEEEccCCCCCCce
Confidence 999988765421 13467999999999998 799999999875 689999999999999886
Q ss_pred EEEeCCCCcccccccCCC--CCC--------CcceeeccceeEeecCCCceeEEeecCCcceecccC--CeEEEEEeecc
Q 002134 689 FYSDLNGFQMSRRETYDK--IPL--------QGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKD--GWLEIMLDRRL 756 (961)
Q Consensus 689 fyTDsnG~~~~~R~~~~~--~pv--------~~NyYP~~s~~~i~D~~~~~ltvltd~~~G~sSl~~--G~lElml~Rrl 756 (961)
+ .| -+|++++|++..+ .+. .-+.||+.+++.+.|.+ .+++|+||+.+|.....+ +.|.|+|.|+.
T Consensus 631 ~-~d-~~fG~i~Rp~~~~~~~~W~~~~~~e~p~~~~~~~~~v~ls~~~-~Gvall~dg~~ey~v~g~~~~~i~LTLlRs~ 707 (875)
T PRK09819 631 L-AD-QQFGSITRPVNDPAMDVWEQEGWQEAPISIEPMQSFVALHDER-HGVAVFTEGVREYEIIGENYDTIALTLFRGV 707 (875)
T ss_pred E-cC-CCceEEECCCcCccccccccccceeCCCCChhhhceEEEecCC-ceEEEECCCcceEEEecCCCCeEEEEeeccc
Confidence 4 47 8888999987532 111 11467999999999985 799999999999775543 38999999987
Q ss_pred c
Q 002134 757 S 757 (961)
Q Consensus 757 ~ 757 (961)
.
T Consensus 708 g 708 (875)
T PRK09819 708 G 708 (875)
T ss_pred C
Confidence 4
No 5
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-65 Score=560.83 Aligned_cols=583 Identities=19% Similarity=0.278 Sum_probs=451.2
Q ss_pred HHHHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHHH
Q 002134 4 LERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMA 83 (961)
Q Consensus 4 f~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~p 83 (961)
=.+|.++.+|+.++++++.+..||+-.|||.||++|.++|++||||||++.|++|+.++||...+.-|+||+||+|+|||
T Consensus 332 Q~~WlkedhP~~f~kl~e~~~q~qF~pvGGtWVE~DtNiPsGEslvRQFl~GQ~FFlkeFG~~c~~FWLPDTFGYSsQ~P 411 (1078)
T KOG4342|consen 332 QLEWLKEDHPGLFSKLQEFACQGQFVPVGGTWVEMDTNIPSGESLVRQFLQGQNFFLKEFGKMCSEFWLPDTFGYSSQLP 411 (1078)
T ss_pred HHHHHhhhChhHHHHHHHHHhcCceeeccceEEecCCCCCChHHHHHHHHhhhhHHHHHhhhhhcceeccccccccchhh
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCceeeeeccchHHHHHHhhccceeEEEeecCCCCCCCceEEeecCCccCCCCCCCCCCCcccccccccccCcc
Q 002134 84 YLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGF 163 (961)
Q Consensus 84 ~ll~~~G~~~~~~~R~~~~~k~~~~~~~~~eF~W~~s~~~~~gs~i~th~~~~y~Y~~p~~c~p~~~~c~~fdf~~~~g~ 163 (961)
||++.+||+.|++++++|+.-+.++ +..|.|. |.|||+|++||.|..+|..
T Consensus 412 QicrlcGidrFLTQKLSWNniNSFP---hsTFnW~----glDGSqvl~HmPPgntYta---------------------- 462 (1078)
T KOG4342|consen 412 QICRLCGIDRFLTQKLSWNNINSFP---HSTFNWE----GLDGSQVLVHMPPGNTYTA---------------------- 462 (1078)
T ss_pred HHHHhhcHHHHHHhhccccccCcCC---ccceeee----eccCceEEEecCCCCcccc----------------------
Confidence 9999999999999999998777665 6789999 8899999999998656632
Q ss_pred ccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhHHHHHHHhHHHHHHHHhcCCCCce
Q 002134 164 FYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNA 243 (961)
Q Consensus 164 ~~~~c~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~tn~il~~~GdDf~~~~~~~a~~~~~n~~kli~~iN~~~~~~~ 243 (961)
+.+|.+ +...++|-+.+. .+.+.-+|+.+||++++|+++|.+ .|.+ |+-+|....+.|
T Consensus 463 ---------------d~~v~d-VL~tv~qnk~~~-~~~~gl~lfG~GDGGGGPT~eML~----klrR-~r~~~Nt~G~lP 520 (1078)
T KOG4342|consen 463 ---------------DGSVED-VLKTVAQNKDKG-RANHGLFLFGFGDGGGGPTQEMLD----KLRR-IRSLSNTDGVLP 520 (1078)
T ss_pred ---------------cCcHHH-HHHHHHhcCCcc-ccCcceEEEEecCCCCCCcHHHHH----HHHH-hhcccccCCccc
Confidence 112322 333344444432 234455667788999999987754 3333 344554434678
Q ss_pred EEEeC-CHHHHHHHHHHHhhhcccCCCCCCCCCCccCCCccccccccccccCCCceeeeeccchhhhhHHHHHHHHHHHH
Q 002134 244 EAKFG-TLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRAT 322 (961)
Q Consensus 244 ~v~~s-T~~dYf~al~~~~~~~~~~~~~~~~~~~~~~lp~~~gDffpya~~~~~ywtGyyTSRp~~K~~~R~~e~~L~~a 322 (961)
+++.| |+++||+++.+... +...||+|.||+|- ++|+|+|||++.+|+++|++|..|+.+
T Consensus 521 ~vqlg~tvdeffd~ilkrtn-------------qg~~LptW~GELyf------EfHrGTYTtqAq~KKlmR~~Ei~LHD~ 581 (1078)
T KOG4342|consen 521 RVQLGITVDEFFDAILKRTN-------------QGHDLPTWVGELYF------EFHRGTYTTQAQIKKLMRECEIILHDV 581 (1078)
T ss_pred ceeecCCHHHHHHHHHhhhc-------------cCCcccccchheEE------EEecCceeeHHHHHHHHHHHHHHhhhH
Confidence 99999 99999999987653 23579999999996 999999999999999999999999999
Q ss_pred HHHHHHHhhcccccccCCCChhhHHHHHHHHHHhhhhccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002134 323 EMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGI 402 (961)
Q Consensus 323 E~l~ala~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTs~~~V~~Dy~~rl~~a~~~~~~v~~~al~~L~~~ 402 (961)
|.+.++|.... ....|| ...|.++||.++++||||.+||++++.|+++..-.|++.+..+..+++.+++.|...
T Consensus 582 E~~sslas~~s---~dy~YP---~~qlq~LWr~~LLcQFHDVlpGSCIeMVykeA~p~~~~v~k~~~tLl~~a~~~L~as 655 (1078)
T KOG4342|consen 582 ELLSSLASARS---ADYLYP---AAQLQHLWRLLLLCQFHDVLPGSCIEMVYKEAMPHYEDVRKHGNTLLSAAAAALCAS 655 (1078)
T ss_pred HHHHHHHHhhc---ccccCc---HHHHHHHHHHHHHHHhcccCCcHHHHHHHHhhhhHHHHHHHhhHHHHHHHHHHHhcC
Confidence 99999986532 246788 688999999999999999999999999999999999999999999999999998542
Q ss_pred ccccCCCCCcccccccccccCCCCcceeeeccCCceeEEEEEcCCCcceeEEEEEEEcCCcEEEEcCCCcEeeEeecccc
Q 002134 403 RERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPEL 482 (961)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~v~v~~~~~~V~d~~g~~v~~Qi~~~~ 482 (961)
. .+...+++.|+|+|.|.+++.++-+... +
T Consensus 656 ~--------------------------------s~ke~L~~~nTLpW~~~~v~~~~kp~k~----------~-------- 685 (1078)
T KOG4342|consen 656 E--------------------------------SGKEGLLIVNTLPWKRIEVMALPKPGKA----------H-------- 685 (1078)
T ss_pred C--------------------------------CCccceEEEeccccceeeeecccCCCCc----------e--------
Confidence 1 1234689999999999998876532111 0
Q ss_pred ccCccccccCceEEEEEEecCCCeeEEEEEEeCccCCCCCCcceeeecCCCCCCCCCCCccccCCCCceeEeeceEEEEE
Q 002134 483 RHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSF 562 (961)
Q Consensus 483 ~~~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~f 562 (961)
..-..++|.+|++...- . ..|. |.. ...+.++|.|+.+||++
T Consensus 686 -------------~~e~c~~~g~~ta~vt~-----~---~~p~---------------~~y--q~Dd~~~L~Ng~lrV~i 727 (1078)
T KOG4342|consen 686 -------------SLELCTVPGMGTAPVTP-----P---TSPV---------------FVY--QTDDSVTLDNGILRVKI 727 (1078)
T ss_pred -------------eEEEeccCCccccCCCC-----C---CCce---------------eEE--ecCCeEEEECCEEEEEE
Confidence 01123677777653210 0 0111 111 13467899999999999
Q ss_pred EccCceEEEEEcc-CCcEEE--------E-EEEEEEeccCC--CCcee---ecCCCCCCccccCCc-eEEEEECCceEEE
Q 002134 563 DVRHGLLQKISHI-NGSQNV--------V-EEEIDMYSSQG--SGAYL---FMPNGDAHPITEAGG-LMVISKGPLMEEA 626 (961)
Q Consensus 563 d~~~G~l~sl~~k-~g~~~~--------~-~~~~~~Y~~~~--sgAYi---F~P~~~~~~~~~~~~-~~~v~~Gpl~~~v 626 (961)
++ +|.|.|+.+. .|++.. + .++|+.|++.+ +.||+ |.-. ..++..... ..+-.+|+++..+
T Consensus 728 ~p-~G~itSl~d~~~grE~ld~~~Grn~~GaNQfVlfdD~PL~WqAWDte~ysle--~y~vl~k~k~v~v~~~g~lr~sv 804 (1078)
T KOG4342|consen 728 DP-TGRITSLVDVASGREALDTAEGRNAVGANQFVLFDDVPLYWQAWDTEDYSLE--RYPVLGKAKTVAVGTEGGLRGSV 804 (1078)
T ss_pred CC-CCceeeeeehhcccchhcccccccccCcccEEEecCCccchhhhhhhhhcee--cceecCCCceEEeecCCCcceEE
Confidence 98 6999999853 455432 2 37899998754 56664 4432 335554444 4467899999988
Q ss_pred EEeecccccCCceEEEEEEecCCCccceeeEEEEEEeeeecCCCCCeEEEEEEEeeeCCCCeEEEeCCCCcccccccCCC
Q 002134 627 YSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDK 706 (961)
Q Consensus 627 ~~~~~~~~~~~~i~q~irLy~~~~~~~~~~iei~~~Vd~~~~~~~~~e~~~rf~t~i~s~~~fyTDsnG~~~~~R~~~~~ 706 (961)
.+..+.. ..+.+.++|.|-.+..-..-..|.|..+|+|.. .+|-+-+.|+.+|.|..+-|.. .|++.+|+|+-+
T Consensus 805 ~v~~qIS-e~s~~k~~isL~~~~~~ak~~~V~f~teV~Whe---~~KFLKVEFPv~irs~fAsYEt--QFGitkRPTHYN 878 (1078)
T KOG4342|consen 805 WVLLQIS-ENSRLKQEISLDVGCTDAKLPYVRFHTEVHWHE---AHKFLKVEFPVRIRSSFASYET--QFGITKRPTHYN 878 (1078)
T ss_pred EEEEEcC-cccccceEEEEecccccccCCceeeEEEEeehh---cCceEEeeccccccccchhhhh--hcccccCCcccc
Confidence 7664321 357799999997765211112588889998864 6889999999999998777754 455999999776
Q ss_pred CCCCcceeeccce--eEeecCCCceeEEeecCCcceecccCCeEEEEEeeccccCCC
Q 002134 707 IPLQGNYYPMPAL--AFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDG 761 (961)
Q Consensus 707 ~pv~~NyYP~~s~--~~i~D~~~~~ltvltd~~~G~sSl~~G~lElml~Rrl~~DD~ 761 (961)
.+....-|.|-.. +...|- +.+++||||+++|. |.....|.|.|.|..-..|.
T Consensus 879 TSWDvAkFEVchhkfaDySe~-~~Gvs~LNDCKYGf-SthGnlmrLSLLRsPKaPDA 933 (1078)
T KOG4342|consen 879 TSWDVAKFEVCHHKFADYSEH-GFGVSLLNDCKYGF-STHGNLMRLSLLRSPKAPDA 933 (1078)
T ss_pred ccchhhHhHHHHhhhhhhhhc-ccceeeeccccccc-ccccceeeehhhcCCCCCCc
Confidence 6655555666544 444454 58999999999995 58889999999999998884
No 6
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). This domain is found at the C terminus of glycosyl hydrolases from family 38.; GO: 0015923 mannosidase activity, 0006013 mannose metabolic process; PDB: 2WYI_A 2WYH_A 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=1.5e-43 Score=416.77 Aligned_cols=433 Identities=29% Similarity=0.421 Sum_probs=282.9
Q ss_pred eEEEEEcCCCcceeEEEEEEEcCCcEEEEcCCCcEeeEeeccccccCccccccCceEEEEEEecCCCeeEEEEEEeCccC
Q 002134 439 QSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVG 518 (961)
Q Consensus 439 ~~vvvfNpl~~~r~~~V~v~v~~~~~~V~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~ 518 (961)
++|+|||||+|+|+++|+|+|..+.+.+.|.+|++|++|++|. ......++|.|.++||||||++|+|......
T Consensus 1 ~~vvvfN~l~~~r~~vv~i~v~~~~~~~~~~~g~~v~~qi~~~------~~~~~~~~l~f~~~vPalGy~~~~i~~~~~~ 74 (457)
T PF07748_consen 1 FPVVVFNPLPWPRSEVVEIPVNTPNVSVYDADGKPVPSQIIPE------PYSTGRYELLFVVDVPALGYKTYRIVEGESS 74 (457)
T ss_dssp EEEEEEE-SSS-EEEEEEEEEEECEEEEECSTSHEEHCEEEEE------EEEEEEEEEEEEEEE-TTEEEEEEEEECSS-
T ss_pred CEEEEEECCCCcEEEEEEEEeccCceEEEecCCcEeeEEEEec------cCCCCceEEEEEeccCCceeEEEEeeccccc
Confidence 4799999999999999999999999999999999999999982 1134578899988999999999999986542
Q ss_pred CCCCCcceeeecCCCCCCCCCCCccccCCCCceeEeeceEEEEEEccCceEEEEE-ccCCcEEE--EEEEEEEeccCCCC
Q 002134 519 CDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKIS-HINGSQNV--VEEEIDMYSSQGSG 595 (961)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~fd~~~G~l~sl~-~k~g~~~~--~~~~~~~Y~~~~sg 595 (961)
..... .. .....+...|||++|+|+||+.+|.|.+++ +++|+++. ..+++..|.+-. +
T Consensus 75 ~~~~~---~~---------------~~~~~~~~~leN~~~~v~~~~~tG~i~sl~dk~~g~~~~~~~~~~~~~y~~~~-~ 135 (457)
T PF07748_consen 75 EPSNE---AS---------------IAKDSGDNVLENEFYKVTFDPNTGGIKSLYDKKTGREYVDQDGNDFYIYEDID-G 135 (457)
T ss_dssp -TTC-----C---------------EEETT-TTEEETSSEEEEE-TTTSSEEEEEETTTS-EEEEEECEEEEEEEBTT-S
T ss_pred ccccc---ce---------------eecceeeEEEEccEEEEEEeCCCCeEEEEEEccCCeEEEeecCCceeEecccc-c
Confidence 10000 00 000113478999999999998779999997 45788887 778888886521 1
Q ss_pred ceeecCCCCCCccccCCceEEEEECCceEEEEEeeccc-------------ccCCceEEEEEEecCCCccceeeEEEEEE
Q 002134 596 AYLFMPNGDAHPITEAGGLMVISKGPLMEEAYSYPRTA-------------WERSPISHSTRLYNGNNMIQEFLIEKEYH 662 (961)
Q Consensus 596 AYiF~P~~~~~~~~~~~~~~~v~~Gpl~~~v~~~~~~~-------------~~~~~i~q~irLy~~~~~~~~~~iei~~~ 662 (961)
.|.-.+.. .........+.+||+...+.+.+... ...+.++++++||++++ +|||+++
T Consensus 136 ~~~~~~~~----~~~~~~~~~~~~g~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~i~~~i~L~~~~~-----~ie~~~~ 206 (457)
T PF07748_consen 136 DYDISPLE----LQRSGAYLFVEDGPLRSSIRVEYKFELPKNLSLVKRSEQTGSSRITQTIRLYKGSP-----RIEFETE 206 (457)
T ss_dssp CTTE-SCC----CGSEECCEEEEESSSEEEEEEEEEEEEESCBECEEEESCEEEEEEEEEEEEETTES-----SEEEEEE
T ss_pred cccccccc----cccCceEEEEecCCceEEEEEEEEEeccCCcEEEEEEEeccceEEEEEEEEecCce-----EEEEEEE
Confidence 11111100 00111233445677777766553210 13457999999999987 6999999
Q ss_pred eeeecCCCCC-eEEEEEEEeeeCCCCeEEEeCCCCcccccccCCCCCCCcceeeccceeEeecCCCceeEEeecCCccee
Q 002134 663 VELLSHNFND-RELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVA 741 (961)
Q Consensus 663 Vd~~~~~~~~-~e~~~rf~t~i~s~~~fyTDsnG~~~~~R~~~~~~pv~~NyYP~~s~~~i~D~~~~~ltvltd~~~G~s 741 (961)
||+... .. ++++++|+|+|.++..||+|++|+++.+|+++.+.|+++|||||++.+||.|++ .+|+|+||+++|++
T Consensus 207 vdn~~~--~~~~~l~~~f~t~i~~~~~~~~~~fG~~~r~~~~~~~~~~~~~~~p~~~~~~v~~~~-~~l~i~~d~~~g~~ 283 (457)
T PF07748_consen 207 VDNWAE--DHRKELRVRFPTNIDSDEAFYDDQFGFIERKRPTHPNTPWEANYYPVPSHAFVDDSD-SRLAILNDGKYGYE 283 (457)
T ss_dssp EEE-TT--SCEEEEEEEEEES-S-TCEEEEESTTEEEEECESSTTTTCGGG-EEECSCCEEEECS-ECEEEEESS-EEEE
T ss_pred eccccc--CCceeEEEEeecCCCCCCEEEECCCCeEEecCCccccCCcccccCCCcceEEEEcCC-CCEEEEcCCCcceE
Confidence 995442 22 379999999999999999999997666658777889999999999999999986 57999999999999
Q ss_pred ccc-CCeEEEEEeeccccCCCCCCCcCccCCceeeEEEEEEEeecccCCcccCCCCcccCcchhhhhccccccccceeee
Q 002134 742 SLK-DGWLEIMLDRRLSRDDGRGLGQGVLDNRAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFI 820 (961)
Q Consensus 742 Sl~-~G~lElml~Rrl~~DD~rGvge~l~d~~~~~~~~~ll~e~~~~~~~~~~~~~~~~~ps~~~~~~~~~l~~p~~~~~ 820 (961)
++. +|+||||||||+.+||++|++ .|+|+.......... ....+..+++|+.+|.
T Consensus 284 ~~~~~g~l~ltL~R~~~~D~g~~~~-----------~~~l~~~~~~~~~~~-------------~~~~a~~l~~Pl~~~~ 339 (457)
T PF07748_consen 284 SLDQDGELELTLLRRPSQDDGRGVF-----------RYALYPHSGSWDEAD-------------VVQEAYELNQPLIVFN 339 (457)
T ss_dssp ECTTTTEEEEEEEEEBSCG-SSSEE-----------CCEEEEEEEEEEEEE-------------CHHCHHHHTS-EEEES
T ss_pred eccCCCeEEEEEeecccccCCccEE-----------EEEEEEecccccccc-------------chhhhhhccCccEEee
Confidence 887 999999999999999999998 345555433210000 0011236888998772
Q ss_pred ccCCCCCcCCCCCCCcCCCC---CCCCCceeEEee--ecCCCCCCCCCCCCccceeeeeeeeccCcccccCCC-Cccccc
Q 002134 821 SKKPQELSVQPPPRSFSPLA---GSLPCDLHIVNF--KVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGR-SQCVSV 894 (961)
Q Consensus 821 ~~~~~~~~~~~~~~~~s~l~---~~LP~~vhLltl--~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~-~~~~~~ 894 (961)
.+.. .......++++. ..+||++|+.+| ..+.+..... ...-++|||+.+..|.-..... ..|...
T Consensus 340 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sa~K~aed~~----~~~~~~ilR~~n~~~~~~~~~~~~~~~~~ 411 (457)
T PF07748_consen 340 SSNI----QARQLNSFSGLSLPPEESPLNIHLLNLVVSALKKAEDGS----DWSDGLILRLYNPSGKETEASLDFLSKPL 411 (457)
T ss_dssp S--T----TBEE--CE-TCS--SSEESTCECEEEEEEEEEEECTTTS----EEETCEEEEEEESSSSTCCCTTCCTSCCT
T ss_pred cccc----ccccccCCCcccccccccccccCCCcccccccccccccc----cccCCEEEEEEecCCCccccccccCCccc
Confidence 2111 011123344443 348999999998 2222111000 0012478888766554322111 111111
Q ss_pred cccccchhhhcccCccceEEEccccCccccccccCCCCcccCCCCCCceEeccceeeEEE
Q 002134 895 VDEPLNLFSMFKGLAILNAKATSLNLLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQAYK 954 (961)
Q Consensus 895 ~~~~v~l~~lf~~~~v~~~~e~sL~~~~~~~~~~~~~~~~~~~~~~~~v~l~PmeIrtf~ 954 (961)
....+.+.+||....+.+++|+++..... .....|+|+|||||||+
T Consensus 412 ~~~~~~~~~lle~~~~~~i~e~s~~~~~~--------------~~~~~~~l~P~EIkT~r 457 (457)
T PF07748_consen 412 SGAEVNLVNLLEEPDIEEIEETSLSDPSE--------------SNSVELTLKPFEIKTFR 457 (457)
T ss_dssp EEEEEEEESTTSSSCEEEEEEE-SEEEES--------------CGGTCSEE-TTEEEEEE
T ss_pred eeEEEEecccccCCCccceEeeccCCCCC--------------CCEeEEEEeCcEEEEEC
Confidence 12457778899988889999999532111 12347899999999996
No 7
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). Lysosomal alpha-mannosidase is necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. The enzyme catalyses the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides, and can cleave all known types of alpha-mannosidic linkages. Defects in the gene cause lysosomal alpha-mannosidosis (AM), a lysosomal storage disease characterised by the accumulation of unbranched oligo-saccharide chains.; GO: 0004559 alpha-mannosidase activity, 0005975 carbohydrate metabolic process; PDB: 2WYI_A 2WYH_A 1O7D_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=4.4e-45 Score=399.27 Aligned_cols=224 Identities=33% Similarity=0.574 Sum_probs=175.6
Q ss_pred ChHHHHHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCch
Q 002134 1 MSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSA 80 (961)
Q Consensus 1 ~~ff~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~ 80 (961)
+++|++||+. .|+.++++|+||++||||||||||||+||+++++|++||||++|++|++++||+.|++||+||+||||+
T Consensus 49 ~~~~~~~~~~-~p~~~~~~~~lv~~Gri~~vgg~~~~~D~~l~~~Eslirql~~G~~~~~~~fg~~~~~~~~~D~FG~~~ 127 (275)
T PF01074_consen 49 TAYLEDYLED-APEEFKRIKKLVKEGRIEIVGGWYVQPDENLPSGESLIRQLLYGHKYLRKEFGVRPKVAWQPDSFGHSA 127 (275)
T ss_dssp CHHHHHHHHC-SGHHHHHHHHHHHTTSEEESSSBSS-B-SSSS-HHHHHHHHHHHHHHHHHHHTG--SEEEESSSSSB-T
T ss_pred hHHHHHHHHh-CCHHHHHHHHHHHhceeEEeCceeeeccccCCCHHHHHHHHhhhHHHHHHhcCCCCCeEEeCCCCCCch
Confidence 4678888866 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceeeeeccchHHHHHHhhccceeEEEeecCCCCCCCceEEeecCCccCCCCCCCCCCCccccccccccc
Q 002134 81 TMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARM 160 (961)
Q Consensus 81 ~~p~ll~~~G~~~~~~~R~~~~~k~~~~~~~~~eF~W~~s~~~~~gs~i~th~~~~y~Y~~p~~c~p~~~~c~~fdf~~~ 160 (961)
++|+||+++||++++++|+++..+..+..++..+|+|+ ++|||+||||++|. +|.. +..||+|
T Consensus 128 ~lP~il~~~Gi~~~v~~r~~~~~~~~~~~~~~~~F~W~----g~dGs~ilt~~~~~-~y~~-------~~~~~~~----- 190 (275)
T PF01074_consen 128 QLPQILKQFGIKYFVIWRISWNDKNPFKANPQSEFYWQ----GPDGSEILTHVLPN-YYYG-------PWYGSEF----- 190 (275)
T ss_dssp CHHHHHHTTT-SEEEESSS-HHHHHHHHHTTSSEEEEE-----TTSTEEEEEE-TS-T-TS-------HHTTCCH-----
T ss_pred hhHHHHhccCcceEEEeccccccccccccCCCceEEEe----cCCCcceeEEeccc-CCCC-------CCCCccc-----
Confidence 99999999999999999999999999888889999999 67889999999996 3321 2233222
Q ss_pred CccccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhHHHHHHHhHHHHHHHHhcCC-
Q 002134 161 GGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNP- 239 (961)
Q Consensus 161 ~g~~~~~c~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~tn~il~~~GdDf~~~~~~~a~~~~~n~~kli~~iN~~~- 239 (961)
+++..+++++++.+..+.++++|+|+|+| ..++.++++++++||+..
T Consensus 191 -----------------------~~~~~~~~~~~~~~~~~~~~~~l~~~G~d---------~~~~~~~~~~~~~i~~~~~ 238 (275)
T PF01074_consen 191 -----------------------EDADELLEQLRKLAKKYYTNNILIPYGDD---------DDGGPPDEELIEYINEWNE 238 (275)
T ss_dssp -----------------------HHHHHHHHHHHHHHCCSSSSEEEEEEEEE---------HHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------ccHHHHHHHHHHHHHhcCCCceEEEeecC---------CCCCCcHHHHHHHHHHhcc
Confidence 34567888888888888999999999988 223456667777777321
Q ss_pred -CCceEEEeCCHHHHHHHHHHHhhhcccCCCCCCCCCCccCCCcc-cccccccc
Q 002134 240 -SLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSL-SGDFFTYA 291 (961)
Q Consensus 240 -~~~~~v~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~lp~~-~gDffpya 291 (961)
...+++++||+++||++|+++ ..+|++ +|||+|||
T Consensus 239 ~~~~~~i~~sT~~~yf~~l~~~-----------------~~~p~~~~~df~~Y~ 275 (275)
T PF01074_consen 239 EYPGPKIKYSTLSEYFEALEKE-----------------SELPVHYHGDFPPYA 275 (275)
T ss_dssp HGCTEEEEE--HHHHHHHHHHC-------------------B-EE-ES-B-S-E
T ss_pred cCCCeEEEECCHHHHHHHHHhc-----------------cCCCcccCCCCCCCC
Confidence 237999999999999999874 368999 99999986
No 8
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.3e-41 Score=411.81 Aligned_cols=536 Identities=19% Similarity=0.238 Sum_probs=391.6
Q ss_pred HHHHHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHH
Q 002134 3 YLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATM 82 (961)
Q Consensus 3 ff~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~ 82 (961)
..+.|.++..|+..++ ++|+.|+|+++||+||.+|.++++||++.||+.+|+||+.+.||...|+.|.+|+||.|+++
T Consensus 248 ~~y~~l~~d~p~l~~~--~~v~~~~~~~~~g~~ve~d~n~~sGEslsrq~~~gq~~~~~~f~~ssri~w~pd~fg~s~~L 325 (943)
T COG0383 248 ALYNWLKPDVPFLFSR--PAVEFEQWEIVGGMWVEEDLNTPSGESLSRQFLYGQRFFTEKFGASSRIYWKPDSFGFSGQL 325 (943)
T ss_pred HHHHHhcCccHHHhhc--ccccccceEEeecccccccCCccccchhhhhhhccceeeecccCccceeEeehhccccchhH
Confidence 4689999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceeeeeccchHHHHHHhhccceeEEEeecCCCCCCCceEEeecCCccCCCCCCCCCCCcccccccccccCc
Q 002134 83 AYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGG 162 (961)
Q Consensus 83 p~ll~~~G~~~~~~~R~~~~~k~~~~~~~~~eF~W~~s~~~~~gs~i~th~~~~y~Y~~p~~c~p~~~~c~~fdf~~~~g 162 (961)
|+|+..+|++.|+++++.|++-+.++. ..|.|+ +.+|+++++|+.+ ||
T Consensus 326 pqil~p~gi~~f~t~klawn~tn~~Ph---~~~~w~----~~dg~e~~~hds~---------~~---------------- 373 (943)
T COG0383 326 PQILEPLGIDVFVTTKLAWNDTNRFPH---DLLRWR----WKDGTENLAHDSI---------CG---------------- 373 (943)
T ss_pred HHHHHhhcchhhhccccchhhccCCCh---hHheee----cccccccceeecC---------CC----------------
Confidence 999999999999999999999887763 668888 7799999999765 11
Q ss_pred cccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhHHHHHHHhHHHHHHHHhcCCCCc
Q 002134 163 FFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLN 242 (961)
Q Consensus 163 ~~~~~c~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~tn~il~~~GdDf~~~~~~~a~~~~~n~~kli~~iN~~~~~~ 242 (961)
| ..| ..+ . ..++|.+. ....-..+...||.+++++.+|++.. .
T Consensus 374 -----~--~~d-----~v~-----~--~~~~r~~~-~~~~~~~~~g~gd~ggg~~~dm~~~~----~------------- 416 (943)
T COG0383 374 -----C--SSD-----PVH-----R--EMEYRFEK-INQVGLYLYGYGDGGGGPSIDMLENP----E------------- 416 (943)
T ss_pred -----C--ccc-----HHH-----H--HHHhhhhh-hccceeEEeeccCCCCCCCHHHHhcc----c-------------
Confidence 1 001 111 1 11223222 12233445556788888887765521 1
Q ss_pred eEEEeCCHHHHHHHHHHHhhhcccCCCCCCCCCCccCCCccccccccccccCCCceeeeeccchhhhhHHHHHHHHHHHH
Q 002134 243 AEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRAT 322 (961)
Q Consensus 243 ~~v~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~lp~~~gDffpya~~~~~ywtGyyTSRp~~K~~~R~~e~~L~~a 322 (961)
...+..+|.....+... .....|++.|++|. ++|+|.|||+...|.++|..|..|+.+
T Consensus 417 ----~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ely~------E~hrg~~t~~~~~k~~~r~~e~~l~d~ 474 (943)
T COG0383 417 ----LPIAEGVFNTGVEKKTS------------TLELVPTWDGELYL------ELHRGTYTTQAKTKKLNRESEFLLEDA 474 (943)
T ss_pred ----cccccceeeecceeeee------------ecccccccchhhhh------hccCceeehhhhhhhhccccccceecc
Confidence 11222333332221100 12468999999996 899999999999999999999999999
Q ss_pred HHHHHHHhhcccccccCCCChhhHHHHHHHHHHhhhhccccccCCCchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002134 323 EMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVL-DYGTRMHTSLQDLQIFMSKAIEVLLG 401 (961)
Q Consensus 323 E~l~ala~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTs~~~V~~-Dy~~rl~~a~~~~~~v~~~al~~L~~ 401 (961)
|.+.+++.... ..+..|| .+.+.++|+.++++|+||+++||+...|+. |....+......+..++..++..|.+
T Consensus 475 e~~~~~~~~~~--~~~~~~~---~~~~~~~w~~~l~~qfhdvlpgs~i~~vy~~~a~~~~~~~~~~~~~i~~~~~~~l~~ 549 (943)
T COG0383 475 EGISVEAAIIE--GDRVTYP---YELLNELWKGLLLAQFHDVLPGSSIKEVYSYDALPLLEVVQKGASKIAELALKVLSS 549 (943)
T ss_pred cccchhhhhhc--cccccCc---hhhHHHHHHHhhhhhceeeccccceeeechhhHHHHHHhhhccchhhhhhhhhhhhh
Confidence 99998864321 1124566 678999999999999999999999999999 88888888888888888888877622
Q ss_pred cccccCCCCCcccccccccccCCCCcceeeeccCCceeEEEEEcCCCcceeEEEEEEEcCCcEEEEcCCCcEeeEeeccc
Q 002134 402 IRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPE 481 (961)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~v~v~~~~~~V~d~~g~~v~~Qi~~~ 481 (961)
. ....+.++|++.|.+. .++|+|..+..+..+...
T Consensus 550 ~----------------------------------~~e~~~~~~~~~~~~~----------~~~v~d~~~~~~~~~~~~- 584 (943)
T COG0383 550 Q----------------------------------CLENLFVKNTLSWNGI----------SLQVLDKTSGGIYTSQLT- 584 (943)
T ss_pred c----------------------------------cccceEEEeeccCCcc----------eEEEEEcCCCceehhhhh-
Confidence 1 2235789999999881 456677655555443221
Q ss_pred cccCccccccCceEEEEEEecCCCeeEEEEEEeCccCCCCCCcceeeecCCCCCCCCCCCccccCCCCceeEeeceEEEE
Q 002134 482 LRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILS 561 (961)
Q Consensus 482 ~~~~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~ 561 (961)
..-++|++|...++++.... .+ .....+++..+..
T Consensus 585 ----------------~~ed~~~~g~~~i~~~~~~~-----~~------------------------~~~~~~~~~~~~~ 619 (943)
T COG0383 585 ----------------ALEDVGDIGNEYIYSQPTKT-----EP------------------------ETVIEEKEWKRLI 619 (943)
T ss_pred ----------------hhhhcCCcccceeEeccccc-----cc------------------------cccccccchheee
Confidence 11379999999888733211 00 0112233333334
Q ss_pred EEccCc-eEEEEEccCCcEEEEEEEEEEeccCCCCceeecCCCCCC--ccccCCceEEEEECCceEEEEEeecccccCCc
Q 002134 562 FDVRHG-LLQKISHINGSQNVVEEEIDMYSSQGSGAYLFMPNGDAH--PITEAGGLMVISKGPLMEEAYSYPRTAWERSP 638 (961)
Q Consensus 562 fd~~~G-~l~sl~~k~g~~~~~~~~~~~Y~~~~sgAYiF~P~~~~~--~~~~~~~~~~v~~Gpl~~~v~~~~~~~~~~~~ 638 (961)
++ ++| .+..+.++ -. ...||.-.+..... .+.... ...+++|||+.++++.. .+..+.
T Consensus 620 ~~-~~gn~~~~~~~~----------~~-----~~~~w~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~ 680 (943)
T COG0383 620 IN-DTGNQLALIEDE----------PA-----YWDAWNIDKFLEEELLALTALP-EEAIENGPLVRTVRVSK--ELTEST 680 (943)
T ss_pred cc-CCCcceeeeecc----------cc-----eechhcchhhhhhhhhhhhccc-cchhccccceeeeeeee--eccceE
Confidence 43 356 33322210 01 12344333322111 112222 55788999999998764 345678
Q ss_pred eEEEEEEecCCCccceeeEEEEEEeeeecCCCCCeEEEEEEEeeeCCCCeEEEeCCCCcccccccCCCCCC--Ccceeec
Q 002134 639 ISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIPL--QGNYYPM 716 (961)
Q Consensus 639 i~q~irLy~~~~~~~~~~iei~~~Vd~~~~~~~~~e~~~rf~t~i~s~~~fyTDsnG~~~~~R~~~~~~pv--~~NyYP~ 716 (961)
+.|.|++|++++ .|+|++.||+.. .+|.+++.|+++++++.. ..| -.|+.++|+++.+.+. +.+--|+
T Consensus 681 i~~~i~l~~~s~-----~l~~~t~vd~q~---~~~~lrv~fp~~~~s~~a-~~d-~~fg~v~Rp~~~~~~W~~a~~e~p~ 750 (943)
T COG0383 681 ITQKVTLYKGSP-----RLDFKTEVDNQV---RDHRLRVLFPTDIASDFA-TAD-IPFGVVERPTHPNTSWENARFEVPL 750 (943)
T ss_pred EEEEEEEecCCc-----eeEEEEEEEccc---cceEEEEEecccccccce-ecc-ccceeeccCCCCchhhhcccCcchh
Confidence 999999999998 799999999865 689999999999999864 336 8899999999776654 4455566
Q ss_pred cceeEeecCCCce--eEEeecCCcceecccCCeEEEEEeeccc
Q 002134 717 PALAFMQGSNGQR--FSVHSRQSLGVASLKDGWLEIMLDRRLS 757 (961)
Q Consensus 717 ~s~~~i~D~~~~~--ltvltd~~~G~sSl~~G~lElml~Rrl~ 757 (961)
..++.+.|.. .+ +++++|+++|++ ..++.|.|+|.|...
T Consensus 751 ~~~vdls~~~-~g~~vs~ln~~kYg~~-~~~~~l~lTLLrs~~ 791 (943)
T COG0383 751 QKFVDLSDGE-YGVTVSLLGDCKYGIS-THGNLLALTLLRSVG 791 (943)
T ss_pred hccccccCCc-cceeEeccCCcceeEe-ccCCEEEEEeccccc
Confidence 6777777764 56 999999999976 599999999999883
No 9
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0008270 zinc ion binding; PDB: 1O7D_C 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A 3BUQ_A ....
Probab=99.87 E-value=1e-22 Score=177.99 Aligned_cols=80 Identities=41% Similarity=0.603 Sum_probs=67.9
Q ss_pred CceeeeeccchhhhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCChhhHHHHHHHHHHhhhhccccccCCCchhHHHH
Q 002134 296 DYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVL 375 (961)
Q Consensus 296 ~ywtGyyTSRp~~K~~~R~~e~~L~~aE~l~ala~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTs~~~V~~ 375 (961)
+||+|||||||.+|+++|.+|++|++||+|++++.... .+..+| ...|+++|+.|+++||||+||||++++|++
T Consensus 1 e~~~G~~tSr~~~K~~~r~~e~~L~~~E~l~~~~~~~~---~~~~~~---~~~l~~~w~~l~~~q~HD~i~GT~~~~V~~ 74 (80)
T PF09261_consen 1 EYWTGYYTSRPDIKQLNRRAENLLRAAEPLAALAALLG---NGGDYP---QEELEKAWKALLLNQFHDAITGTSIDSVYD 74 (80)
T ss_dssp EES-GGGCSTHHHHHHHHHHHHHHHCHHHHHHHCHHH-----HSG-H---HHHHHHHHHHHHCTTBTTTTTS-S-HHHHH
T ss_pred CCcceeeeCHHHHHHHHHHHHHHHHHHHHHHHHHhHhc---cCcccc---HHHHHHHHHHHHHhccCCCCCCcChHHHHH
Confidence 58999999999999999999999999999999986541 123455 678999999999999999999999999999
Q ss_pred HHHHHH
Q 002134 376 DYGTRM 381 (961)
Q Consensus 376 Dy~~rl 381 (961)
||.+||
T Consensus 75 d~~~rl 80 (80)
T PF09261_consen 75 DYLRRL 80 (80)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 999986
No 10
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain. Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase PUBMED:12634058.
Probab=99.83 E-value=5.5e-21 Score=166.62 Aligned_cols=79 Identities=42% Similarity=0.571 Sum_probs=70.7
Q ss_pred ceeeeeccchhhhhHHHHHHHHHHHHHHHHHHHhhcccccccCCCChhhHHHHHHHHHHhhhhccccccCCCchhHHHHH
Q 002134 297 YWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLD 376 (961)
Q Consensus 297 ywtGyyTSRp~~K~~~R~~e~~L~~aE~l~ala~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTs~~~V~~D 376 (961)
||+|||||||.+|+++|++|++|+.+|.+++++.... .+..+| .+.|+.+||.|+++||||+||||++++|++|
T Consensus 1 ~h~G~~Tsr~~~K~~~r~~E~~L~~~e~~~~~~~~~~---~~~~~~---~~~l~~~wk~ll~~q~HD~i~Gt~~~~V~~d 74 (79)
T smart00872 1 YHRGTYTSRPYLKRLNRRLESLLRAAEELAALAALLL---LGYKYP---SEQLEELWKALLLNQFHDAITGTSIDEVYDD 74 (79)
T ss_pred CCCceecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCCc---HHHHHHHHHHHHHhcCcccCCccCcHHHHHH
Confidence 7999999999999999999999999999999875431 245567 5789999999999999999999999999999
Q ss_pred HHHHH
Q 002134 377 YGTRM 381 (961)
Q Consensus 377 y~~rl 381 (961)
|.+|+
T Consensus 75 ~~~r~ 79 (79)
T smart00872 75 YETRL 79 (79)
T ss_pred HHHhC
Confidence 99875
No 11
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=99.33 E-value=1.8e-13 Score=169.41 Aligned_cols=298 Identities=16% Similarity=0.121 Sum_probs=210.3
Q ss_pred cCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHHHHHHHHcC
Q 002134 11 SSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMG 90 (961)
Q Consensus 11 ~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~p~ll~~~G 90 (961)
..|+.+++++.+++.|++ .+|.++.+.|.+.++.|+.+|+++.|..+.. .+|...+.||.+|.||+..++|+++..+|
T Consensus 64 v~~~~~~~~~~~~~~~~l-~ig~~~~~~~~~~~~~e~~~rn~l~~~~~~~-~~~~~~~~g~~~d~~g~~~qa~~~~~~~~ 141 (943)
T COG0383 64 VPPELKDRVKLLIASGKL-GIGPWYTQTDTFILSGESNVRNLLIGEFDAE-RFGKAMKLGYFPDTFGNLGQAPQLYENAG 141 (943)
T ss_pred ecccchhhHHHHHhhcCc-cccCCCCeeEEEEeccccceeeeecchHHHH-HhhhhhccccccccchhhhhhhHHHHhcC
Confidence 568888899999999999 5899999999999999999999999999876 57788999999999999999999999999
Q ss_pred CceeeeeccchHHH--HHH-------hhccceeEEEeecCCCCCCCceEEeecCCccCCCCCCCCCCCcccccccccccC
Q 002134 91 FENMLIQRTHYELK--KEL-------ALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMG 161 (961)
Q Consensus 91 ~~~~~~~R~~~~~k--~~~-------~~~~~~eF~W~~s~~~~~gs~i~th~~~~y~Y~~p~~c~p~~~~c~~fdf~~~~ 161 (961)
++.+.|+|+-.... +.- -.....+..|. .+++++++.+.++. .|..+..
T Consensus 142 i~~~~f~r~~~~~~~~~~~~~~~~~~~~~~~~ei~~~----~~~~~~~l~il~~~-~y~~g~~----------------- 199 (943)
T COG0383 142 ISAVAFGRGAALIGFGQLVLFELLEAYGSDFSEITWS----EPDGSQVLGILLAN-GYSNGNE----------------- 199 (943)
T ss_pred CchhhcccccchhhcccchhhhhhhHhcCcCcccccc----cCCchhhHHHHHHH-Hhhcccc-----------------
Confidence 99999999854211 000 00123355555 45667777777764 5543211
Q ss_pred ccccccCCCCCCCCCCCh-hhHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhHHHHHHHhHHHHHHHHhcCCC
Q 002134 162 GFFYEACPWRQNPVETNQ-ENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPS 240 (961)
Q Consensus 162 g~~~~~c~~~~~p~~~~~-~nv~~r~~~~~~~~~~~~~~~~tn~il~~~GdDf~~~~~~~a~~~~~n~~kli~~iN~~~~ 240 (961)
++... .-++-....-++..++++ .+..++++.|.|..+. +.+....+++.|....
T Consensus 200 -------------I~~~ghahid~aWlw~l~et~r~a---~ts~~~~~~l~D~~p~--------~~~~~s~~~~y~~l~~ 255 (943)
T COG0383 200 -------------IPAVGHAHIDTAWLWPLDETERKA---STSFSLVMNLMDHYPV--------QKFVQSAAALYNWLKP 255 (943)
T ss_pred -------------ccccchhhHHHHHhccHHHHHHHH---hhhhhheecccccChh--------hhhhhhHHHHHHHhcC
Confidence 11111 223333334455666666 5778889999998764 4566666667665421
Q ss_pred CceEEEeCC----HHHHHHHHHHHhhhcccCCCCCCCCCCccCCCccccccccccccCCCce------eeeeccchhhhh
Q 002134 241 LNAEAKFGT----LDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYW------SGYYVSRPFFKA 310 (961)
Q Consensus 241 ~~~~v~~sT----~~dYf~al~~~~~~~~~~~~~~~~~~~~~~lp~~~gDffpya~~~~~yw------tGyyTSRp~~K~ 310 (961)
...-.|+. ...||......+ ...+++.+||+.. +...|= -..-+||..+|.
T Consensus 256 -d~p~l~~~~~v~~~~~~~~~g~~v---------------e~d~n~~sGEsls---rq~~~gq~~~~~~f~~ssri~w~p 316 (943)
T COG0383 256 -DVPFLFSRPAVEFEQWEIVGGMWV---------------EEDLNTPSGESLS---RQFLYGQRFFTEKFGASSRIYWKP 316 (943)
T ss_pred -ccHHHhhcccccccceEEeecccc---------------cccCCccccchhh---hhhhccceeeecccCccceeEeeh
Confidence 11112222 223333322211 1356889999864 222332 234489999999
Q ss_pred HHHHHHHHH-HHHHHHHH-------HHhhcccccccCCCChhhHHHHHHHHHHhhhhccccccCCCchhHHHHHHHHHHH
Q 002134 311 VDRVLEQTL-RATEMMVA-------LLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMH 382 (961)
Q Consensus 311 ~~R~~e~~L-~~aE~l~a-------la~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTs~~~V~~Dy~~rl~ 382 (961)
.+-..+..| +.+|++.. +++. .++.+| .+.+.-+|+....++.||.++||+.+.|+.+...|..
T Consensus 317 d~fg~s~~Lpqil~p~gi~~f~t~klawn-----~tn~~P---h~~~~w~~~dg~e~~~hds~~~~~~d~v~~~~~~r~~ 388 (943)
T COG0383 317 DSFGFSGQLPQILEPLGIDVFVTTKLAWN-----DTNRFP---HDLLRWRWKDGTENLAHDSICGCSSDPVHREMEYRFE 388 (943)
T ss_pred hccccchhHHHHHHhhcchhhhccccchh-----hccCCC---hhHheeecccccccceeecCCCCcccHHHHHHHhhhh
Confidence 988888887 46788775 4443 366788 6889999999999999999999999999999888877
Q ss_pred H
Q 002134 383 T 383 (961)
Q Consensus 383 ~ 383 (961)
.
T Consensus 389 ~ 389 (943)
T COG0383 389 K 389 (943)
T ss_pred h
Confidence 5
No 12
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 57 GH57 from CAZY comprises enzymes with two known activities; alpha-amylase (3.2.1.1 from EC) and 4-alpha-glucanotransferase (2.4.1 from EC).; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1K1X_B 1K1W_A 1K1Y_A 3N98_A 3N8T_A 3N92_A 1UFA_A 3P0B_A.
Probab=97.82 E-value=5.2e-05 Score=86.41 Aligned_cols=90 Identities=18% Similarity=0.281 Sum_probs=71.7
Q ss_pred hccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCH-HHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHHHHHHH
Q 002134 9 RDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHY-FAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLR 87 (961)
Q Consensus 9 ~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~-es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~p~ll~ 87 (961)
.+.....-+.+|+|+++|++|++|++|..+=-.+..- +++..|+..|.+.+++.||++|+..|.+. .+.+..+..+++
T Consensus 106 ~~~~~~ii~~~~~l~~~G~iEll~~~~~h~ilpl~~~~~d~~~Qi~~~~~~~~~~FG~~P~G~W~pE-~a~~~~l~~~l~ 184 (360)
T PF03065_consen 106 REIIGDIIEAFRELAERGQIELLTSPYYHPILPLLPDPEDFRAQIEMGREYFKKHFGRRPRGFWLPE-CAYSPGLEEILA 184 (360)
T ss_dssp HHTTT-HHHHHHHHHHTTSEEEEEE-TT-B-GGGSSHHHHHHHHHHHHHHHHHHHHSS--SBEE-GG-G-B-TTHHHHHH
T ss_pred cchhhhhHHHHHHHHHCCCEEEEeCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCCCceECcc-cccCHHHHHHHH
Confidence 3456678899999999999999999999988777777 99999999999999999999999999986 589999999999
Q ss_pred HcCCceeeeecc
Q 002134 88 RMGFENMLIQRT 99 (961)
Q Consensus 88 ~~G~~~~~~~R~ 99 (961)
++||+++++.--
T Consensus 185 ~~Gi~~~i~d~~ 196 (360)
T PF03065_consen 185 EAGIRYTILDGH 196 (360)
T ss_dssp HTT--EEEEECH
T ss_pred HcCCEEEEECcH
Confidence 999999998653
No 13
>COG1543 Uncharacterized conserved protein [Function unknown]
Probab=95.81 E-value=0.025 Score=63.82 Aligned_cols=91 Identities=21% Similarity=0.375 Sum_probs=78.3
Q ss_pred HHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCH-HHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHHHH
Q 002134 6 RWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHY-FAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAY 84 (961)
Q Consensus 6 ~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~-es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~p~ 84 (961)
..|+..+.+.-++||++.++|.+|+++.+.+-.---+-.. +++=-|+..|.+-..++||..|+--|.| -=++.+.++.
T Consensus 116 ~~~e~~d~~ll~~f~~~~~~g~ieilts~athg~lPll~~peAi~AQi~~g~~~ye~~fg~~P~GiWlP-Ecay~pgie~ 194 (504)
T COG1543 116 GYWEQYDGNLLEAFKELQRSGGIEILTSAATHGYLPLLGGPEAIEAQILTGIELYEEHFGLAPKGIWLP-ECAYAPGIER 194 (504)
T ss_pred HHHHHhhHHHHHHHHHHHHcCCceeeeehhhheehhhcCCchhhHHHHHHHHHHHHHHhCCCCCceech-hhccccchHH
Confidence 4688888999999999999999999998765433222222 7888899999999999999999999999 5699999999
Q ss_pred HHHHcCCceeeee
Q 002134 85 LLRRMGFENMLIQ 97 (961)
Q Consensus 85 ll~~~G~~~~~~~ 97 (961)
+++.+||++++.-
T Consensus 195 ~l~~~Gi~yf~vd 207 (504)
T COG1543 195 ILKDAGIEYFFVD 207 (504)
T ss_pred HHHhcCceEEEec
Confidence 9999999999986
No 14
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase. This family of polysaccharide deacetylases includes NodB (nodulation protein B from Rhizobium) which is a chitooligosaccharide deacetylase []. It also includes chitin deacetylase from yeast [], and endoxylanases which hydrolyses glucosidic bonds in xylan [].; GO: 0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, 0005975 carbohydrate metabolic process; PDB: 2IW0_A 2CC0_B 2VYO_A 2J13_A 2C71_A 2C79_A 1W1A_1 1W1B_1 1W17_A 1NY1_B ....
Probab=94.55 E-value=0.11 Score=49.04 Aligned_cols=76 Identities=22% Similarity=0.328 Sum_probs=61.8
Q ss_pred HHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCC-chHHHHHHHHcCCce
Q 002134 15 QRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGY-SATMAYLLRRMGFEN 93 (961)
Q Consensus 15 ~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGh-s~~~p~ll~~~G~~~ 93 (961)
..+.+++++++| +||.+=||.-.+-...+.+.+.+++..+.++|++.+|..|+. | .=|||. +..+-++++++||++
T Consensus 46 ~~~~l~~l~~~G-~ei~~H~~~H~~~~~~~~~~~~~ei~~~~~~l~~~~g~~~~~-f-~~P~g~~~~~~~~~l~~~G~~y 122 (123)
T PF01522_consen 46 YPDQLRELAAAG-HEIGNHGWSHPNLSTLSPEELRREIERSREILEEITGRPPKG-F-RYPFGSYDDNTLQALREAGYKY 122 (123)
T ss_dssp HHHHHHHHHHTT--EEEEE-SSSSCGGGS-HHHHHHHHHHHHHHHHHHHSSEESE-E-E-GGGEECHHHHHHHHHTT-EE
T ss_pred ccccchhHHHHH-HHHHhcCCcccccccCCHHHHHHHHHHHHHHHHHHhCCCCcE-E-ECCCCCCCHHHHHHHHHcCCCc
Confidence 368899999999 999999999999999999999999999999999999994433 4 457887 667789999999986
No 15
>TIGR03212 uraD_N-term-dom putative urate catabolism protein. This model represents a protein that is predominantly found just upstream of the UraD protein (OHCU decarboxylase) and in a number of instances as a N-terminal fusion with it. UraD itself catalyzes the last step in the catabolism of urate to allantoate. The function of this protein is presently unknown. It shows homology with the pfam01522 polysaccharide deacetylase domain family.
Probab=94.41 E-value=1.7 Score=48.04 Aligned_cols=88 Identities=17% Similarity=0.081 Sum_probs=70.2
Q ss_pred HHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHHHHH
Q 002134 6 RWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYL 85 (961)
Q Consensus 6 ~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~p~l 85 (961)
-|+-+.+|+ .+|+++++| .||.+=||...+-..-+.+...++|..+.+-|++..|.+| .||.- -.+|..++.|
T Consensus 99 g~~~e~~P~---~v~~i~~~G-HEIg~Hg~~H~~~~~ls~~~e~~~i~~s~~~i~~~tG~~P-~G~~~--~~~s~~T~~L 171 (297)
T TIGR03212 99 AMALARNPE---AVAAMKEAG-WEIASHGLRWIDYQDMDEAQEREHIAEAIRLHTEVTGERP-LGWYT--GRTSPNTRRL 171 (297)
T ss_pred HHHHHHCHH---HHHHHHHcC-CEEeeccccCcccccCCHHHHHHHHHHHHHHHHHHhCCCC-ceEEC--CCCChhHHHH
Confidence 345555554 677778899 8999999998887777889999999999999988888765 56753 3689999999
Q ss_pred HHH-cCCceeeeeccc
Q 002134 86 LRR-MGFENMLIQRTH 100 (961)
Q Consensus 86 l~~-~G~~~~~~~R~~ 100 (961)
+++ .||.+..-...+
T Consensus 172 L~e~~Gf~Y~sd~~~d 187 (297)
T TIGR03212 172 VAEEGGFLYDADSYAD 187 (297)
T ss_pred HHHhcCceEeCchhhc
Confidence 998 999987766643
No 16
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=89.69 E-value=1.9 Score=44.39 Aligned_cols=74 Identities=18% Similarity=0.245 Sum_probs=62.0
Q ss_pred HHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCC-chHHHHHHHHcCCce
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGY-SATMAYLLRRMGFEN 93 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGh-s~~~p~ll~~~G~~~ 93 (961)
+.+|+++++|. ||-+-+|.-++-..-+.+.+.+++..+.+.|++..|..|+ |--=|+|. +..+..++++.||+.
T Consensus 49 ~~~~~i~~~Gh-eig~Ht~~H~~~~~~~~~~~~~ei~~~~~~l~~~~g~~~~--~fr~P~G~~~~~~~~~l~~~G~~~ 123 (191)
T TIGR02764 49 ELVKEIVKDGH-EIGSHGYRHKNYTTLEDEKIKKDILRAQEIIEKLTGKKPT--LFRPPSGAFNKAVLKAAESLGYTV 123 (191)
T ss_pred HHHHHHHhCCC-EEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHhCCCCC--EEECCCcCCCHHHHHHHHHcCCeE
Confidence 67899999996 8999999998888888999999999999999999998775 44557774 556677888888873
No 17
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=86.49 E-value=3.3 Score=43.79 Aligned_cols=76 Identities=11% Similarity=0.090 Sum_probs=63.8
Q ss_pred HHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCC-CchHHHHHHHHcCCce
Q 002134 16 RASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFG-YSATMAYLLRRMGFEN 93 (961)
Q Consensus 16 ~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFG-hs~~~p~ll~~~G~~~ 93 (961)
.+.+|+++++|. ||-+-+|.-.+-..-+.+.+.+++....+.|++..|..+ ..|--=|+| ++..+..+++++|+..
T Consensus 79 p~~ir~i~~~Gh-eIgnHt~~H~~~~~ls~~~~~~ei~~~~~~i~~~~G~~~-~~~fR~P~G~~~~~~~~~l~~~Gy~~ 155 (224)
T TIGR02884 79 PDLIKRMVDEGH-IVGNHSVHHPSLTAVNDEKFKEELTGVEEEFKKVTGQKE-MKYFRPPRGVFSERTLAYTKELGYYT 155 (224)
T ss_pred HHHHHHHHHcCC-EeeecCccCcCcccCCHHHHHHHHHHHHHHHHHHhCCCC-CCEEeCCCCCcCHHHHHHHHHcCCcE
Confidence 368899999995 688889998888888899999999999999999888762 346667899 4777889999999874
No 18
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=83.09 E-value=6.7 Score=42.73 Aligned_cols=73 Identities=25% Similarity=0.331 Sum_probs=62.6
Q ss_pred HHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCC-chHHHHHHHHcCCc
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGY-SATMAYLLRRMGFE 92 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGh-s~~~p~ll~~~G~~ 92 (961)
+.+|+++++|. ||-+=+|.-++-..-+.+.+.+++..+.+.|++..|..|+ |--=|+|. +..+-.+++++|+.
T Consensus 128 ~l~k~i~~~Gh-eIGnHT~sH~~l~~ls~~~~~~Ei~~~~~~i~~~~G~~p~--~fRpP~G~~n~~~~~~l~~~G~~ 201 (268)
T TIGR02873 128 QLAKMIVEQGH-EIGNHAYNHPDMATLSKEEIYDQINQTNEIIEATIGVTPK--WFAPPSGSFNDNVVQIAADLQMG 201 (268)
T ss_pred HHHHHHHHCCC-EEEecCCcCCCcccCCHHHHHHHHHHHHHHHHHHhCCCCC--EEECCCCCCCHHHHHHHHHCCCe
Confidence 46888999996 7899999998888889999999999999999999998777 66668987 46777788888874
No 19
>TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily. Members of this protein family belong to the family of polysaccharide deacetylases (pfam01522). All are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria, and are found near the epsH homolog that is the putative exosortase gene. The highest scoring homologs below the trusted cutoff for this model are found in several species of Methanosarcina, an archaeal genus.
Probab=81.32 E-value=4.8 Score=43.71 Aligned_cols=86 Identities=15% Similarity=0.174 Sum_probs=64.8
Q ss_pred HhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCC--CCCc-hHHH
Q 002134 7 WWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDP--FGYS-ATMA 83 (961)
Q Consensus 7 Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDp--FGhs-~~~p 83 (961)
|+.+..| +.+|+++++| .||.+=||.-.+-..-+.+.+.+++....+.|++..|..|+ +|-.=. +|.. ....
T Consensus 51 ~~~e~~p---~lir~i~~~G-hEIgsHg~sH~~l~~ls~ee~~~eI~~s~~~Le~itG~~~~-gfRaP~~s~~~~t~~a~ 125 (265)
T TIGR03006 51 WVAERYP---ELVRRIVAAG-HELASHGYGHERVTTQTPEAFRADIRRSKALLEDLSGQPVR-GYRAPSFSIGKKNLWAL 125 (265)
T ss_pred cchhhCH---HHHHHHHHcC-CEeeeccccCcCchhCCHHHHHHHHHHHHHHHHHHhCCCce-EEECCCCCCCCCcHHHH
Confidence 5555555 4699999999 59999999988777778899999999999999988888766 454322 3332 3346
Q ss_pred HHHHHcCCceeeee
Q 002134 84 YLLRRMGFENMLIQ 97 (961)
Q Consensus 84 ~ll~~~G~~~~~~~ 97 (961)
.+++++||.+..-.
T Consensus 126 ~iL~e~Gy~YdsS~ 139 (265)
T TIGR03006 126 DVLAEAGYRYSSSI 139 (265)
T ss_pred HHHHHCCCEEEEee
Confidence 89999999875443
No 20
>COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=71.81 E-value=9.9 Score=46.33 Aligned_cols=81 Identities=17% Similarity=0.332 Sum_probs=66.5
Q ss_pred CHHHHHHHHHHHHcCCeEEEceeeeecccCCC----CHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHHHHHHH
Q 002134 12 SESQRASFTNLVKNGQLEIVGGGWVMNDEANS----HYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLR 87 (961)
Q Consensus 12 ~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~----~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~p~ll~ 87 (961)
.++.-+.+|++++.|+.|++.--|--+=-.+- -++++++|+..+....++.||+.|+..|.+- +=.+.++..+++
T Consensus 178 ~~~vl~~~r~l~e~g~~e~~~~pyyHsl~pl~~d~gw~~d~~~qv~~~~~~~~elfG~~p~~~~~tE-l~y~~~i~~~~~ 256 (615)
T COG1449 178 APRVLEAFRELAESGKVELTASPYYHSLIPLLADDGWYEDFKEQVMMSRELYKELFGVWPSGFWNTE-LAYNDQILEYFE 256 (615)
T ss_pred HhhhHHHHHHHHhcCceEEEecccccccchhcccCCchHHHHHHHHHHHHHHHHHhCCCCccccChh-hhccHHHHHHHH
Confidence 56778899999999999999876643322222 4569999999999999999999999999863 567788999999
Q ss_pred HcCCce
Q 002134 88 RMGFEN 93 (961)
Q Consensus 88 ~~G~~~ 93 (961)
.+||..
T Consensus 257 e~G~~~ 262 (615)
T COG1449 257 ESGFSW 262 (615)
T ss_pred HcCCcc
Confidence 999984
No 21
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=67.29 E-value=6.2 Score=32.31 Aligned_cols=24 Identities=33% Similarity=0.583 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHcCCeEEEceee
Q 002134 12 SESQRASFTNLVKNGQLEIVGGGW 35 (961)
Q Consensus 12 ~p~~~~~vk~LV~~GrlE~vgGgw 35 (961)
.++.++-+.++|++|+||++||-|
T Consensus 35 ~~eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 35 LEELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp HHHHHHHHHHHHHTTSEE--TTEE
T ss_pred HHHHHHHHHHHHHCCcEEecCCEE
Confidence 356777788999999999999877
No 22
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=65.35 E-value=23 Score=43.55 Aligned_cols=80 Identities=18% Similarity=0.282 Sum_probs=62.5
Q ss_pred HHHHHHHHcCCeEEEceeeeeccc--------------------CCCCHHH-------HHHHHHHHHHHHHHhcCCCCcc
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDE--------------------ANSHYFA-------IIEQIMEGNMWLNDTIGFIPKN 69 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~De--------------------a~~~~es-------~I~Ql~~G~~~l~~~fG~~p~v 69 (961)
+.||+++++|-+||-+=+|..+.- ....||+ +-+.+....+.|++..|..|+.
T Consensus 168 ~qIrEM~~sGLvEIGSHT~sHh~~~~~np~g~~~pa~~~~~y~~~~~~yEs~~~~~~rl~~Di~~s~~~Ie~~lG~~p~~ 247 (672)
T PRK14581 168 KQITEMSKSGLVEIGAHTYASHYGVIANPQGNTEPAAANLQYDPKTKQYETVEAFKQRMEKDVALITQRIVQATGKQPRV 247 (672)
T ss_pred HHHHHHHHCCCcEEEcCCcccccccccCccccccchhhhccccccccccccHHHHHHHHHHHHHHHHHHHHHHhCCCCCE
Confidence 689999999999998888877631 2223443 5566888889999999988774
Q ss_pred cEeeCCCCC-chHHHHHHHHcCCceeeeec
Q 002134 70 SWAIDPFGY-SATMAYLLRRMGFENMLIQR 98 (961)
Q Consensus 70 ~W~iDpFGh-s~~~p~ll~~~G~~~~~~~R 98 (961)
-.=|||+ +...-.+++++||+..+..+
T Consensus 248 --FayPyG~yn~~~~~iak~aGy~~afTt~ 275 (672)
T PRK14581 248 --WVWPYGAPNGTVLNILRQHGYQLAMTLD 275 (672)
T ss_pred --EEcCCCCcCHHHHHHHHHCCCcEEEECC
Confidence 4478995 77888999999999888766
No 23
>KOG4120 consensus G/T mismatch-specific thymine DNA glycosylase [Replication, recombination and repair]
Probab=61.68 E-value=30 Score=37.51 Aligned_cols=71 Identities=17% Similarity=0.323 Sum_probs=47.3
Q ss_pred CCCCHHHHH-HHHHHHHHHHHHhcC-CCCcccEeeCCCCCchHHHHHHHHcCCceeeeeccchHHHHHH---hhccceeE
Q 002134 41 ANSHYFAII-EQIMEGNMWLNDTIG-FIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKEL---ALHQNLEY 115 (961)
Q Consensus 41 a~~~~es~I-~Ql~~G~~~l~~~fG-~~p~v~W~iDpFGhs~~~p~ll~~~G~~~~~~~R~~~~~k~~~---~~~~~~eF 115 (961)
+.++.-++- ..|.+|-|-|.+++- ++|+||- |.+++-|++...+ ..-|.++|
T Consensus 212 ~t~gsaDL~~kE~~eG~RIL~eKlqryrP~Vav-----------------------FnGK~I~E~fsk~~~g~~~K~f~F 268 (426)
T KOG4120|consen 212 PTSGSADLRKKEMQEGARILYEKLQRYRPQVAV-----------------------FNGKGIWEEFSKMLTGKLPKTFVF 268 (426)
T ss_pred CCCCcccccHHHHhcchHHHHHHHHhhCcceEE-----------------------EcCcchHHHHHHHhhccCcceeEe
Confidence 333444443 368899999999987 6899863 3344445443322 12367899
Q ss_pred EEeecCCCCCCCceEEeecCC
Q 002134 116 IWRQSWDTEETSDIFVHMMPF 136 (961)
Q Consensus 116 ~W~~s~~~~~gs~i~th~~~~ 136 (961)
=|++ +-.++++.|+++||.
T Consensus 269 G~QP--~k~~dt~tfv~Vmps 287 (426)
T KOG4120|consen 269 GWQP--EKFGDTNTFVGVMPS 287 (426)
T ss_pred ccCc--ccCCCcceEEEEccC
Confidence 9984 345789999999994
No 24
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=45.34 E-value=98 Score=38.26 Aligned_cols=80 Identities=14% Similarity=0.271 Sum_probs=61.2
Q ss_pred HHHHHHHHcCCeEEEceeeeecccC--------------------CCCH-------HHHHHHHHHHHHHHHHhcCCCCcc
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDEA--------------------NSHY-------FAIIEQIMEGNMWLNDTIGFIPKN 69 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~Dea--------------------~~~~-------es~I~Ql~~G~~~l~~~fG~~p~v 69 (961)
+.||+++++|-+||-+=+|..|.-. ...| +.+.+.+....+.|++..|..|++
T Consensus 168 eqIreM~~sGlvEIGSHT~~sH~~l~anp~g~~~pa~~~r~~~~~~~~yEs~~e~~~ri~~DL~~s~~~Ie~~tG~~p~~ 247 (671)
T PRK14582 168 QQVREVARSRLVEIASHTWNSHYGIQANPQGSLLPAAVNRAYFTDHARYETAAEYRERIRLDAVKMTEYIRTKAGKNPRV 247 (671)
T ss_pred HHHHHHHhCCCeEEEcCCchhccccccccccccccchhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 6899999999999888888655311 1123 226678999999999999988875
Q ss_pred cEeeCCCCC-chHHHHHHHHcCCceeeeec
Q 002134 70 SWAIDPFGY-SATMAYLLRRMGFENMLIQR 98 (961)
Q Consensus 70 ~W~iDpFGh-s~~~p~ll~~~G~~~~~~~R 98 (961)
-.=|||+ +...-.+++++||+..+..+
T Consensus 248 --FayPyG~~n~~~~~iakeaGY~~afT~~ 275 (671)
T PRK14582 248 --WVWPYGEANGIALEELKKLGYDMAFTLE 275 (671)
T ss_pred --EecCCCCCCHHHHHHHHHCCCeEEEEeC
Confidence 4568985 55678899999999877755
No 25
>TIGR03092 SASP_sspI small, acid-soluble spore protein I. This protein family is restricted to a subset of endospore-forming bacteria such as Bacillus subtilis, all of which are in the Firmicutes (low-GC Gram-positive) lineage. It is a minor SASP (small, acid-soluble spore protein) designated SspI. The gene in Bacillus subtilis previously was designated ysfA.
Probab=38.79 E-value=32 Score=28.42 Aligned_cols=24 Identities=17% Similarity=0.567 Sum_probs=20.9
Q ss_pred HHHHHhhccCHHHHHHHHHHHHcC
Q 002134 3 YLERWWRDSSESQRASFTNLVKNG 26 (961)
Q Consensus 3 ff~~Ww~~~~p~~~~~vk~LV~~G 26 (961)
+|+.||+..+++.|+.+-..+.+|
T Consensus 40 lFE~~W~~~~~~ek~~m~~~l~~~ 63 (65)
T TIGR03092 40 LFEAIWKHANEQEKDEMLETLEQG 63 (65)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHh
Confidence 699999999999999988877665
No 26
>PRK15394 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Provisional
Probab=37.61 E-value=1.2e+02 Score=33.64 Aligned_cols=80 Identities=19% Similarity=0.082 Sum_probs=61.0
Q ss_pred HHHHHHHHcCCeEEEceeeeec----ccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHHHHHHHHcCCc
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMN----DEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFE 92 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~----Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~p~ll~~~G~~ 92 (961)
+.+|+.+++ -||.+=||.-. .-..-+.+.+.++|..+.+-|++-.|..|+ +|-+=-+-.+..+..+++++||.
T Consensus 92 ~lvr~i~~~--HEIG~Hg~~H~~wq~~~~~ls~~e~~~eI~ra~~~Le~itG~~p~-g~raPgw~~~~~tl~ll~e~Gf~ 168 (296)
T PRK15394 92 DIIREAAKA--HEVGLHAWDHHAWQAWSGVWSRQQLIEQIARGVDALEEIIGQPVT-CSAAAGWRADQRVVEAKEAFGFR 168 (296)
T ss_pred HHHHHHHhc--CEehhcccCccchhcccccCCHHHHHHHHHHHHHHHHHHhCCCCC-EEeCCCccCCHHHHHHHHHcCCe
Confidence 457777777 89888888855 234567788999999999999998897753 45554445668889999999999
Q ss_pred eeeeecc
Q 002134 93 NMLIQRT 99 (961)
Q Consensus 93 ~~~~~R~ 99 (961)
+---.|.
T Consensus 169 Y~Ss~~~ 175 (296)
T PRK15394 169 YNSDCRG 175 (296)
T ss_pred eecCCCC
Confidence 8755554
No 27
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=35.41 E-value=1.3e+02 Score=38.48 Aligned_cols=67 Identities=22% Similarity=0.272 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhcccccCC-eEEEEecCCCCCCChhHHHHHHHhHHHHHHHHhcCCCCceE-EEeCCHHHHHHHHHHHh
Q 002134 186 ALKLLDQYKKKSTLYRTN-TLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAE-AKFGTLDDYFRTLREEA 261 (961)
Q Consensus 186 ~~~~~~~~~~~~~~~~tn-~il~~~GdDf~~~~~~~a~~~~~n~~kli~~iN~~~~~~~~-v~~sT~~dYf~al~~~~ 261 (961)
+++|+.....|-.. ++. .+|+|.|--+++|...-|. +++.+.-.-+. +.. ..-|||..||.-|+...
T Consensus 993 IDefIss~e~KWgQ-~S~vvlLLPHGyEGQGPdHSSaR-----iERfLqlcAe~---nm~Va~psTPA~yFHLLRrqa 1061 (1228)
T PRK12270 993 IDEFISSGEAKWGQ-RSGVVLLLPHGYEGQGPDHSSAR-----IERFLQLCAEG---NMTVAQPSTPANYFHLLRRQA 1061 (1228)
T ss_pred HHHHHhhhHhhhcc-ccceEEEccCCcCCCCCCcchHH-----HHHHHHhhccC---CeEEEccCChHHHHHHHHHHh
Confidence 45555554443322 334 5678999888887644332 44444333222 444 45699999999998654
No 28
>PF10074 DUF2285: Uncharacterized conserved protein (DUF2285); InterPro: IPR018754 This entry contains uncharacterised proteins of unknown function.
Probab=35.38 E-value=7.7 Score=35.80 Aligned_cols=28 Identities=25% Similarity=0.601 Sum_probs=24.5
Q ss_pred HHhhccCHHHHHHHHHHHHcCCeEEEceeee
Q 002134 6 RWWRDSSESQRASFTNLVKNGQLEIVGGGWV 36 (961)
Q Consensus 6 ~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv 36 (961)
.||+. ...+.+++.||+.|++ ++.|||-
T Consensus 75 ~~W~~--~~~R~~~~rll~~a~~-l~~gGYr 102 (106)
T PF10074_consen 75 DEWKD--SSLRRRVRRLLRRARA-LMEGGYR 102 (106)
T ss_pred ccccC--hHHHHHHHHHHHHHHH-HHHhhHH
Confidence 48877 7799999999999999 8999983
No 29
>PF14098 SSPI: Small, acid-soluble spore protein I
Probab=34.32 E-value=45 Score=27.68 Aligned_cols=24 Identities=29% Similarity=0.670 Sum_probs=20.8
Q ss_pred HHHHHhhccCHHHHHHHHHHHHcC
Q 002134 3 YLERWWRDSSESQRASFTNLVKNG 26 (961)
Q Consensus 3 ff~~Ww~~~~p~~~~~vk~LV~~G 26 (961)
+|+.||+..+++.|+.+-..+.+|
T Consensus 41 lFE~~W~~~~~~ek~~m~~~l~~~ 64 (65)
T PF14098_consen 41 LFEVIWKNSDESEKQEMVNTLEQG 64 (65)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhc
Confidence 699999999999999988777654
No 30
>PF06045 Rhamnogal_lyase: Rhamnogalacturonate lyase family; InterPro: IPR010325 Rhamnogalacturonate lyase degrades the rhamnogalacturonan I (RG-I) backbone of pectin []. This family contains mainly members from plants, but also contains the plant pathogen Erwinia chrysanthemi.
Probab=31.71 E-value=6.1e+02 Score=26.37 Aligned_cols=30 Identities=20% Similarity=0.286 Sum_probs=24.1
Q ss_pred CCceeEeeceEEEEEEccCceEEEEEccCCc
Q 002134 548 GDVADIRNRHQILSFDVRHGLLQKISHINGS 578 (961)
Q Consensus 548 ~~~~~ieN~~~~v~fd~~~G~l~sl~~k~g~ 578 (961)
....+|+|+.++|+|+...|.+++|. -+|.
T Consensus 15 ~~~VvldNGiVqVtls~p~G~VtgIk-YnGi 44 (203)
T PF06045_consen 15 GRQVVLDNGIVQVTLSKPGGIVTGIK-YNGI 44 (203)
T ss_pred CCEEEEECCEEEEEEcCCCceEEEEE-ECCE
Confidence 35689999999999998778999886 2454
No 31
>PRK10148 hypothetical protein; Provisional
Probab=31.56 E-value=17 Score=35.65 Aligned_cols=17 Identities=18% Similarity=0.122 Sum_probs=15.0
Q ss_pred CcccEeeCCCCCchHHH
Q 002134 67 PKNSWAIDPFGYSATMA 83 (961)
Q Consensus 67 p~v~W~iDpFGhs~~~p 83 (961)
++.||..|+||++|++-
T Consensus 123 ~~~g~v~D~fGi~W~l~ 139 (147)
T PRK10148 123 HGFGKVTDKFGVPWMIN 139 (147)
T ss_pred hccEEEECCCCCEEEEE
Confidence 58999999999999864
No 32
>PRK02955 small acid-soluble spore protein SspI; Provisional
Probab=28.08 E-value=60 Score=27.12 Aligned_cols=24 Identities=17% Similarity=0.577 Sum_probs=20.4
Q ss_pred HHHHHhhccCHHHHHHHHHHHHcC
Q 002134 3 YLERWWRDSSESQRASFTNLVKNG 26 (961)
Q Consensus 3 ff~~Ww~~~~p~~~~~vk~LV~~G 26 (961)
+|+.||+..++..|+.+-..+.+|
T Consensus 43 lFE~~W~~~~~~ek~~m~~~l~~~ 66 (68)
T PRK02955 43 LFEVIWKNADENEKDEMLETLEQG 66 (68)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHh
Confidence 699999999999999887776654
No 33
>PF10549 ORF11CD3: ORF11CD3 domain; InterPro: IPR018877 This entry represents the carboxy-terminal domain from ORF11 (Q9XJS9 from SWISSPROT), one of the proteins of Pseudomonas phage D3 (Bacteriophage D3). The function of these proteins are unknown [].
Probab=23.58 E-value=61 Score=26.29 Aligned_cols=26 Identities=19% Similarity=0.380 Sum_probs=23.1
Q ss_pred HHHHhhccCHHHHHHHHHHHHcCCeEE
Q 002134 4 LERWWRDSSESQRASFTNLVKNGQLEI 30 (961)
Q Consensus 4 f~~Ww~~~~p~~~~~vk~LV~~GrlE~ 30 (961)
+.+| +...|...++|++|.+++|+.+
T Consensus 29 L~~W-k~~Kp~l~~ki~~l~~~~Q~~L 54 (57)
T PF10549_consen 29 LNRW-KWKKPQLEQKIEELEEQLQITL 54 (57)
T ss_pred HHHH-HHhhHHHHHHHHHHHHHhhhcc
Confidence 4567 9999999999999999999964
Done!