Query 002134
Match_columns 961
No_of_seqs 272 out of 1216
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 13:46:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002134.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002134hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bvx_A Alpha-mannosidase 2; fa 100.0 4E-166 1E-170 1560.5 90.9 888 1-959 131-1045(1045)
2 2wyh_A Alpha-mannosidase; hydr 100.0 5E-107 2E-111 1018.8 76.6 757 2-958 77-923 (923)
3 3lvt_A Glycosyl hydrolase, fam 100.0 9.5E-99 3E-103 936.6 76.8 619 2-756 58-754 (899)
4 1o7d_D Lysosomal alpha-mannosi 100.0 6.2E-56 2.1E-60 470.9 27.8 250 550-823 2-272 (282)
5 1o7d_A Lysosomal alpha-mannosi 100.0 1.9E-55 6.6E-60 477.1 24.3 217 2-241 73-296 (298)
6 1o7d_C Lysosomal alpha-mannosi 100.0 2.2E-28 7.5E-33 243.1 17.1 148 349-516 3-150 (159)
7 1o7d_B Lysosomal alpha-mannosi 99.9 1.6E-23 5.5E-28 179.4 6.9 74 242-331 2-75 (84)
8 1o7d_E Lysosomal alpha-mannosi 99.8 2.9E-20 1E-24 174.1 7.1 110 834-961 3-124 (126)
9 1k1x_A 4-alpha-glucanotransfer 99.4 7.4E-12 2.5E-16 149.8 20.9 96 2-99 52-147 (659)
10 3p0b_A TT1467 protein; glycosi 98.9 9.1E-08 3.1E-12 109.8 21.3 90 8-98 137-244 (540)
11 3n98_A Alpha-amylase, GH57 fam 98.7 4.5E-07 1.5E-11 104.6 21.8 90 8-98 116-221 (562)
12 2b5d_X Alpha-amylase; (beta/al 98.3 2.5E-05 8.5E-10 91.1 22.5 87 11-98 120-208 (528)
13 3s6o_A Polysaccharide deacetyl 94.2 2.2 7.5E-05 46.3 19.5 79 17-99 116-195 (321)
14 3cl6_A PUUE allantoinase; URIC 87.6 1.2 4.2E-05 48.0 8.5 79 17-99 111-190 (308)
15 2cc0_A Acetyl-xylan esterase; 84.9 2 7E-05 42.8 8.0 74 17-93 47-121 (195)
16 2y8u_A Chitin deacetylase; hyd 82.4 2.8 9.5E-05 43.1 7.9 74 17-93 75-149 (230)
17 2iw0_A Chitin deacetylase; hyd 82.1 2.3 7.7E-05 44.5 7.2 76 15-93 87-163 (254)
18 3rxz_A Polysaccharide deacetyl 81.3 3.3 0.00011 44.3 8.4 80 17-99 92-172 (300)
19 3qbu_A Putative uncharacterize 77.6 3.7 0.00013 44.6 7.3 80 16-98 103-183 (326)
20 2j13_A Polysaccharide deacetyl 77.0 4 0.00014 42.3 7.1 76 17-94 98-174 (247)
21 3vus_A Poly-beta-1,6-N-acetyl- 75.8 9.1 0.00031 40.2 9.5 82 16-99 126-235 (268)
22 1ny1_A Probable polysaccharide 75.7 5.2 0.00018 41.3 7.5 74 17-93 86-161 (240)
23 2vyo_A ECU11_0510, chitooligos 73.5 8.2 0.00028 40.1 8.3 73 18-93 72-149 (254)
24 1u69_A Hypothetical protein; s 57.8 4 0.00014 39.5 1.9 15 68-82 106-120 (163)
25 4f9d_A Poly-beta-1,6-N-acetyl- 51.8 25 0.00087 41.3 7.8 82 16-99 130-239 (618)
26 2c71_A Glycoside hydrolase, fa 48.2 25 0.00087 35.3 6.3 61 17-80 49-109 (216)
27 2c1i_A Peptidoglycan glcnac de 47.0 31 0.001 38.8 7.2 71 17-92 279-349 (431)
28 2w3z_A Putative deacetylase; P 42.7 40 0.0014 36.0 7.0 75 16-93 150-236 (311)
29 4hd5_A Polysaccharide deacetyl 36.7 76 0.0026 34.5 8.0 80 15-98 246-325 (360)
30 1ldd_A APC2WHB, anaphase promo 31.6 27 0.00093 28.7 2.6 23 13-35 48-71 (74)
31 1tsj_A Conserved hypothetical 20.7 22 0.00075 33.0 0.1 15 68-82 111-125 (139)
No 1
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=100.00 E-value=3.9e-166 Score=1560.49 Aligned_cols=888 Identities=38% Similarity=0.631 Sum_probs=747.2
Q ss_pred ChHHHHHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCch
Q 002134 1 MSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSA 80 (961)
Q Consensus 1 ~~ff~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~ 80 (961)
++||++||++++|+++++||+||++||||||||||||+|||++||||+||||++||+|++++||++|++||+|||||||+
T Consensus 131 ~~~l~~w~~e~~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG~~~~~~W~pD~FG~s~ 210 (1045)
T 3bvx_A 131 ISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSP 210 (1045)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCSSSBCT
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCceEEcCCCCCccH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceeeeeccchHHHHHHhhccceeEEEeecCCCCCCCceEEeecCCccCCCCCCCCCCCccccccccccc
Q 002134 81 TMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARM 160 (961)
Q Consensus 81 ~~p~ll~~~G~~~~~~~R~~~~~k~~~~~~~~~eF~W~~s~~~~~gs~i~th~~~~y~Y~~p~~c~p~~~~c~~fdf~~~ 160 (961)
+|||||++|||++++|+|++|++|+.++..+.+||+|+|+|+++|||+||||++|+++|++||+|||+|+|||+|||.++
T Consensus 211 ~lPqil~~~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~~p~~~Y~~~~~~gp~~~~c~~fdf~~l 290 (1045)
T 3bvx_A 211 TMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRM 290 (1045)
T ss_dssp HHHHHHHTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGS
T ss_pred HHHHHHHHcCCCeEEEecccccccccccccCCceEEEeCCCCCCCCCeEEEEeccccccCcccccCCCcccccccccccc
Confidence 99999999999999999999999999988899999999999999999999999998899999999999999999999999
Q ss_pred CccccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhHHHHHHHhHHHHHHHHhcCCC
Q 002134 161 GGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPS 240 (961)
Q Consensus 161 ~g~~~~~c~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~tn~il~~~GdDf~~~~~~~a~~~~~n~~kli~~iN~~~~ 240 (961)
+|+++ .|||.++|.+++++|+++|+..+++++++++.+|+++++|+|+|+||+|.++.+|..+++||++||++||++++
T Consensus 291 ~~~~~-~~~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~in~~~~ 369 (1045)
T 3bvx_A 291 GSFGL-SCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAH 369 (1045)
T ss_dssp STTSC-CCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred ccccc-cCcccCCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHHHHHHHhhCCC
Confidence 88765 59999999999999999999999999999999999999999999999999988888899999999999999876
Q ss_pred CceEEEeCCHHHHHHHHHHHhhhcccCCCCCCCCCCccCCCccccccccccccCCCceeeeeccchhhhhHHHHHHHHHH
Q 002134 241 LNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLR 320 (961)
Q Consensus 241 ~~~~v~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~lp~~~gDffpya~~~~~ywtGyyTSRp~~K~~~R~~e~~L~ 320 (961)
..++++|||++|||++|+++... ....||+++||||+|++++++||+|||||||++|+++|++|++|+
T Consensus 370 ~~~~v~~sT~~~yf~~l~~~~~~------------~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~ 437 (1045)
T 3bvx_A 370 FNVQAQFGTLQEYFDAVHQAERA------------GQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVR 437 (1045)
T ss_dssp GCEEEEECCHHHHHHHHHHHHHT------------TSCCCCEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHH
T ss_pred CCceEEECCHHHHHHHHHhhccc------------ccccCcccCCcccccccCCcccccceecccHHHHHHHHHHHHHHH
Confidence 57899999999999999876421 013699999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccccCCCChhhHHHHHHHHHHhhhhccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002134 321 ATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLL 400 (961)
Q Consensus 321 ~aE~l~ala~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTs~~~V~~Dy~~rl~~a~~~~~~v~~~al~~L~ 400 (961)
+||+|+++|... +..+| .+.|++|||+|+++||||+|||||+++|++||.+||.+|++.++.++..+++.|+
T Consensus 438 ~aE~l~ala~~~-----~~~~~---~~~L~~~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~ 509 (1045)
T 3bvx_A 438 AAEMLSAWHSWD-----GMARI---EERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLL 509 (1045)
T ss_dssp HHHHHHHTSCCC-----GGGCH---HHHHHHHHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc-----CCCcc---HHHHHHHHHHHhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999988542 33455 6789999999999999999999999999999999999999999999999999987
Q ss_pred ccccccC--CCCCcccccccc-cccCCCCcceeeeccCCc---eeEEEEEcCCCcceeEEEEEEEcCCcEEEEcCCCcEe
Q 002134 401 GIRERYD--QNLSQFEPEQVR-SKYDAQPVHKVINVHEGT---SQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCV 474 (961)
Q Consensus 401 ~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~vvvfNpl~~~r~~~V~v~v~~~~~~V~d~~g~~v 474 (961)
.....+. .....+.....+ .+.+.||.+..+.++ ++ ...|+|||||+|+|+++|+|+|..+.+.|+|.+|++|
T Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~~G~~v 588 (1045)
T 3bvx_A 510 TKPSIYSPDFSFSYFTLDDSRWPGSGVEDSRTTIILG-EDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPV 588 (1045)
T ss_dssp BCTTTCCCCTTSCSEEEECSSSSCTTTCCCCCEECCB-TTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEETTCCEE
T ss_pred hccccccccccccccchhhhccccccccccccccccc-ccccCCceEEEEcCCCcceeeEEEEEeccCceEEEcCCCCEE
Confidence 4221110 111111111111 345566655444332 22 5689999999999999999999999999999999999
Q ss_pred eEeeccccccCcc--------ccccCceEEEEEEecCCCeeEEEEEEeCccCCCCCCcceeeecCCCCCCCCCCCcccc-
Q 002134 475 QSQISPELRHGKS--------KIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSK- 545 (961)
Q Consensus 475 ~~Qi~~~~~~~~~--------~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 545 (961)
++|+++.+..... ....+.|+|+|.|+||||||++|+|...........++.+.+-. .++.++....
T Consensus 589 ~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 664 (1045)
T 3bvx_A 589 EAQVSPVWSWHHDTLTKTIHPQGSTTKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLR----KNPTSLPLGQY 664 (1045)
T ss_dssp CEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEEC----SSCCCCCCTTC
T ss_pred eEEEeeccccccccccccccccCCCCcEEEEEEeccCCceeEEEEEEecCCccccccccceeecc----ccccccccccc
Confidence 9999987642100 00235689999999999999999998764321100011111100 0111221111
Q ss_pred -CCCCceeEeeceE------EEEEEccCceEEEEEc-cCCcEEEEEEEEEEeccC----CCCceeecCCCCCCccccCCc
Q 002134 546 -IEGDVADIRNRHQ------ILSFDVRHGLLQKISH-INGSQNVVEEEIDMYSSQ----GSGAYLFMPNGDAHPITEAGG 613 (961)
Q Consensus 546 -~~~~~~~ieN~~~------~v~fd~~~G~l~sl~~-k~g~~~~~~~~~~~Y~~~----~sgAYiF~P~~~~~~~~~~~~ 613 (961)
...+...|||++| +|+||+ +|.|++|++ ++|+++.+.++|.+|.+. .||||+|+|++.+.++.....
T Consensus 665 ~~~~~~~~leN~~~~~~~~~~v~fd~-~G~L~si~dk~~g~e~~~~~~f~~Y~~~~~~~~sgaY~F~P~~~~~~~~~~~~ 743 (1045)
T 3bvx_A 665 PEDVKFGDPREISLRVGNGPTLAFSE-QGLLKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVELGQP 743 (1045)
T ss_dssp SSCCEEECCCCEEEECTTSCEEEECT-TSCEEEEECSTTSCCEEEEEEEEEECBCSSSCCCCSSCCCBSSSCEECCCCSC
T ss_pred ccCCCceeecccccccccccEEEECC-CCcEEEEEEcCCCeEEEEeeEEEEEecccCCCCCcceEecCCCCCcccccCCc
Confidence 1234578999999 999998 899999996 479999999999999754 689999999998777655455
Q ss_pred eEEEEECCceEEEEEeecccccCCceEEEEEEecCCCccceeeEEEEEEeeeecCCCCCeEEEEEEEeeeCCCCeEEEeC
Q 002134 614 LMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDL 693 (961)
Q Consensus 614 ~~~v~~Gpl~~~v~~~~~~~~~~~~i~q~irLy~~~~~~~~~~iei~~~Vd~~~~~~~~~e~~~rf~t~i~s~~~fyTDs 693 (961)
.+.+++|||+++|++.+ .+++|++|| +.+ +|||+++||+.+ ..|||+++||+|+|+++..||||+
T Consensus 744 ~~~v~~Gpl~~ev~~~~------~~i~q~irL--~~~-----~ieie~~Vd~~~--~~~~el~~rf~t~i~s~~~fyTD~ 808 (1045)
T 3bvx_A 744 VVLVTKGKLESSVSVGL------PSVVHQTIM--RGG-----APEIRNLVDIGS--LDNTEIVMRLETHIDSGDIFYTDL 808 (1045)
T ss_dssp CEEEEECSSCEEEEEEE------TTEEEEEEE--SSS-----SCEEEEEECCTT--CTTEEEEEEEEECCCCTTEEEEEE
T ss_pred eEEEEeCCeEEEEEEEE------eeEEEEEEE--CCe-----eEEEEEEEecCC--CCCeEEEEEeecccCCCCeEEEec
Confidence 67789999999999985 258999999 444 699999998754 258999999999999999999999
Q ss_pred CCCcccccccCCCCCCCcceeeccceeEeecCCCceeEEeecCCcceecccCCeEEEEEeeccccCCCCCCCcCccCCce
Q 002134 694 NGFQMSRRETYDKIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDGRGLGQGVLDNRA 773 (961)
Q Consensus 694 nG~~~~~R~~~~~~pv~~NyYP~~s~~~i~D~~~~~ltvltd~~~G~sSl~~G~lElml~Rrl~~DD~rGvge~l~d~~~ 773 (961)
|||++++|++..++|+++|||||+++|+|+|++ .|||||+||++||||+.+|+||||||||+++||+|||||||+|+..
T Consensus 809 nG~~~ikR~~~~~~p~~~NyYPv~s~~~i~D~~-~~ltvl~drs~G~sSl~~G~lElmlhRrl~~DD~rGvge~l~d~~~ 887 (1045)
T 3bvx_A 809 NGLQFIKRRRLDKLPLQANYYPIPSGMFIEDAN-TRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDNKP 887 (1045)
T ss_dssp TTTEEEEEECCTTSCGGGGCEEESSEEEEECSS-EEEEEEESSCEEEECCSTTEEEEEEEEEBCSCCSSSCCSCBCCCCC
T ss_pred CCceeEEcCCCCCCCcccceEEeeeeEEEEcCC-eeEEEEecCCccccccCCCeEEEEEeeeeccCCcccccccccCCce
Confidence 999999999988899999999999999999985 8999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEeecccCCcccCCCCcccCcchhhhhccccccccceeeeccCCCCCcCCCCCCCcCCCCCCCCCceeEEeee
Q 002134 774 MNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQPPPRSFSPLAGSLPCDLHIVNFK 853 (961)
Q Consensus 774 ~~~~~~ll~e~~~~~~~~~~~~~~~~~ps~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~LP~~vhLltl~ 853 (961)
+..+|+|+++....+.......+... |++++|..++.|++|+++|+.+... ......+|+++..+|||||||||||
T Consensus 888 ~~~~~~l~l~~~~~~~~~~~~~~~~~-~s~~~~~~~~~l~~p~~~~~~~~~~---~~~~~~~~~~l~~~lP~~vhlltL~ 963 (1045)
T 3bvx_A 888 VLHIYRLVLEKVNNCVRPSKLHPAGY-LTSAAHKASQSLLDPLDKFIFAENE---WIGAQGQFGGDHPSAREDLDVSVMR 963 (1045)
T ss_dssp EEEEEEEEEEECTTSCCCCTTCSEEC-CCHHHHHHHHHHHSCCEEEEECSSC---CTTBCSEECTTSCCCCTTEEEEEEE
T ss_pred eeeEEEEEEecccccccccccccccc-cCHHHHHHHHHHhCCcceeeccCcc---cccccccCCcccccCCCCEEEEEeE
Confidence 99999999987654222212222222 6888899999999999998876322 2234578999999999999999999
Q ss_pred cCCCCCCCCCCCCccceeeeeeeeccCcccccCCCCccccccccccchhhhcccCccceEEEccccCccccccccCCCCc
Q 002134 854 VPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDDIGMLGYPEQ 933 (961)
Q Consensus 854 ~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~~~~~~~~~~v~l~~lf~~~~v~~~~e~sL~~~~~~~~~~~~~~~ 933 (961)
++.+... ...+++|+|||.|++|++... +.+++|+|++||+. |++++||||++++.....
T Consensus 964 ~~~~~~~-----~~~~~ll~L~~~~~~~~~~~~-------s~~~~~~l~~lf~~--i~~~~etsL~~~~~~~~~------ 1023 (1045)
T 3bvx_A 964 RLTKSSA-----KTQRVGYVLHRTNLMQCGTPE-------EHTQKLDVCHLLPN--VARCERTTLTFLQNLEHL------ 1023 (1045)
T ss_dssp ECSCTTC-----SEEEEEEEEEECCCCCCSCCC-------CCCCCCCGGGSSSS--EEEEEEECTTSCSEEEEC------
T ss_pred ecCCCCc-----cCceEEEEEeeeccccCcCcc-------cCcccccHHHHhcC--cceEEEecccCCcccccc------
Confidence 9986432 123477888998899876321 23568999999998 999999999998765432
Q ss_pred ccCCCCCCceEeccceeeEEEEEEee
Q 002134 934 LEDVSQDGQVTIAPMEIQAYKLEMRP 959 (961)
Q Consensus 934 ~~~~~~~~~v~l~PmeIrtf~~~~~~ 959 (961)
.....|+|+|||||||+|++++
T Consensus 1024 ----~~~~~v~l~PmeirTf~i~~~~ 1045 (1045)
T 3bvx_A 1024 ----DGMVAPEVCPMETAAYVSSHSS 1045 (1045)
T ss_dssp ----GGGCCCCCCTTCEEEEEEEEEC
T ss_pred ----CCCcceEEcCceeEEEEEEeeC
Confidence 1345899999999999999863
No 2
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=100.00 E-value=5e-107 Score=1018.81 Aligned_cols=757 Identities=16% Similarity=0.182 Sum_probs=575.7
Q ss_pred hHHHHHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchH
Q 002134 2 SYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSAT 81 (961)
Q Consensus 2 ~ff~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~ 81 (961)
+++.+||.+++|+++++||+||++||||+ ||||||+|||++||||+||||++||+|+++ ||++|++||+|||||||++
T Consensus 77 ~~~~~~~~~~~p~~~~~vk~lV~~Grlei-G~wYv~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~pD~FG~s~~ 154 (923)
T 2wyh_A 77 TIILDDYLKVRPEREPEIRQAIASGKLRI-GPFYILQDDFLTSSESNVRNMLIGKEDCDR-WGASVPLGYFPDTFGNMGQ 154 (923)
T ss_dssp THHHHHHHHHCGGGHHHHHHHHHTTSEEC-CSBSSCBCSTTSCHHHHHHHHHHHHHHHHH-HTCCCSSEEESSCSSBCTT
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHcCCEEE-eeeeeccccccCCHHHHHHHHHHHHHHHHH-cCCCCceeEecCCCCcchH
Confidence 45668999999999999999999999996 655599999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHcCCceeeeeccc----hHHH---HHHhhccceeEEEeecCCCCCCCceEEeecCCccCCCCCCCCCCCccccc
Q 002134 82 MAYLLRRMGFENMLIQRTH----YELK---KELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQ 154 (961)
Q Consensus 82 ~p~ll~~~G~~~~~~~R~~----~~~k---~~~~~~~~~eF~W~~s~~~~~gs~i~th~~~~y~Y~~p~~c~p~~~~c~~ 154 (961)
|||||++|||++++++|++ |++| ..+...+.+||+|+ |+|||+||||++| ++|+. |.
T Consensus 155 lPqil~~~Gi~~~~~~R~~~~~~~n~~~~~~~~~~~~~~eF~W~----g~dGs~Ilt~~~p-~~Y~~----g~------- 218 (923)
T 2wyh_A 155 TPQLMLKAGLQAAAFGRGIRPTGFNNQVDTSEKYSSQFSEISWQ----GPDNSRILGLLFA-NWYSN----GN------- 218 (923)
T ss_dssp HHHHHHTTTCCEEEECSSCEECCSSSCCCTTCTTEESSSEEEEE----CTTCCEEEEEECT-TCTTT----TC-------
T ss_pred HHHHHHHcCCCEEEEEeccccccccccccchhhccCCCceEEEE----CCCCCeEEEEECC-CCccC----CC-------
Confidence 9999999999999999999 8765 22344567999999 6789999999999 58852 11
Q ss_pred ccccccCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhHHHHHHHhHHHHHHH
Q 002134 155 FDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDY 234 (961)
Q Consensus 155 fdf~~~~g~~~~~c~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~tn~il~~~GdDf~~~~~~~a~~~~~n~~kli~~ 234 (961)
+.+.++.|++++++.+++.+++ .++++++|+|+|+||+|+. +||+++|++
T Consensus 219 -------------------~~~~~~~~v~~~~~~~~~~~~~---~~~t~~~l~~~G~D~~~~~--------~~~~~~i~~ 268 (923)
T 2wyh_A 219 -------------------EIPTTEAEARLFWDKKLADAER---FASTKHLLMMNGCDHQPVQ--------LDVTKAIAL 268 (923)
T ss_dssp -------------------SCCSSHHHHHHHHHHHHHHHHH---HCSSSEEEEEECCBTCCCC--------TTHHHHHHH
T ss_pred -------------------CCCCCHHHHHHHHHHHHHHHHh---cCCCCeEEEEeecCCCCcc--------hhHHHHHHH
Confidence 1235678888887777666653 3589999999999999864 589999999
Q ss_pred Hhc-CCCCceEEEeCCHHHHHHHHHHHhhhcccCCCCCCCCCCccCCCccccccccccccCCCce---eeeeccchhhhh
Q 002134 235 INS-NPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYW---SGYYVSRPFFKA 310 (961)
Q Consensus 235 iN~-~~~~~~~v~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~lp~~~gDffpya~~~~~yw---tGyyTSRp~~K~ 310 (961)
+|+ .+ .++++|||++|||++|+++. ...||+++||||.+.+ .+| +|||||||++|+
T Consensus 269 ~n~~~~--~~~~~~sT~~~yf~~l~~~~---------------~~~lp~~~GEl~~~~~---~~W~th~G~~tSr~~~K~ 328 (923)
T 2wyh_A 269 ANQLYP--DYEFVHSCFEDYLADLADDL---------------PENLSTVQGEITSQET---DGWYTLANTASARIYLKQ 328 (923)
T ss_dssp HHHHCT--TEEEEECCHHHHHHHHHHHS---------------CSCCCEEESCBSCTTS---CSSSSCGGGGGTTHHHHH
T ss_pred HHhhCC--CceEEECCHHHHHHHHHhhc---------------cccCceecccccCccc---ccceecCCEeccHHHHHH
Confidence 998 45 57999999999999998653 1369999999985433 345 599999999999
Q ss_pred HHHHHHHHH-HHHHHHHHHHhhcccccccCCCChhhHHHHHHHHHHhhhhccccccCCCchhHHHHHHHHHHHHHHHHHH
Q 002134 311 VDRVLEQTL-RATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQ 389 (961)
Q Consensus 311 ~~R~~e~~L-~~aE~l~ala~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTs~~~V~~Dy~~rl~~a~~~~~ 389 (961)
++|++|++| ++||+|+++|... +..|| .+.|+++||+|+++||||+|||||+++|++||..||.++.+.++
T Consensus 329 ~nR~~E~~L~~~aE~l~~la~~~-----g~~yp---~~~L~~~Wk~ll~~Q~HD~i~Gts~~~V~~d~~~~~~~~~~~~~ 400 (923)
T 2wyh_A 329 ANTRVSRQLENITEPLAAMAYEV-----TSTYP---HDQLRYAWKTLMQNHPHDSICGCSVDSVHREMMTRFEKAYEVGH 400 (923)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHH-----HSCCC---HHHHHHHHHHHHTTCBHHHHTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----CCCCc---hHHHHHHHHHHhccCCCcCcCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999 7999999998653 34577 67899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccCCCCCcccccccccccCCCCcceeeeccCCceeEEEEEcCCCcceeEEEEEEEc---------
Q 002134 390 IFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVN--------- 460 (961)
Q Consensus 390 ~v~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~v~v~--------- 460 (961)
.+++.+++.|+...... ...++...++|||||+|+|+++|+|+|.
T Consensus 401 ~l~~~al~~l~~~~~~~--------------------------~~~~~~~~vvvfN~l~~~r~~vV~v~v~~~~~~~~~~ 454 (923)
T 2wyh_A 401 YLAKEAAKQIADAIDTR--------------------------DFPMDSQPFVLFNTSGHSKTSVAELSLTWKKYHFGQR 454 (923)
T ss_dssp HHHHHHHHHHHHTBCCT--------------------------TSCTTSEEEEEEECSSSCEEEEEEEEEEEEEEECTTS
T ss_pred HHHHHHHHHHHhccccc--------------------------cCCCCceEEEEEcCCCceEeEEEEEEEEccccccccc
Confidence 99999999987542100 0012345799999999999999999986
Q ss_pred ----------------CCcEEEEcCCCcEee-Eeecccccc-------Ccc--ccccCceEEEEEEecCCCeeEEEEEEe
Q 002134 461 ----------------RPDITVLDSNWTCVQ-SQISPELRH-------GKS--KIFTGRHRLHWKATIPALGLQVYYIAN 514 (961)
Q Consensus 461 ----------------~~~~~V~d~~g~~v~-~Qi~~~~~~-------~~~--~~~~~~~~l~f~a~vPplG~~ty~i~~ 514 (961)
.+.+.|+|.+|++|+ +|+++.+.. ... ......++|.|.|+||||||++|.|..
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~~qi~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~a~vP~lG~~~~~i~~ 534 (923)
T 2wyh_A 455 FPKEVYQEAQEYLARLSQSFQIIDTSGQVRPEAEILGTSIAFDYDLPKRSFREPYFAIKVRLRLPITLPAMSWKTLALKL 534 (923)
T ss_dssp CHHHHHHHHHHHHHTCCSEEEEECTTCCBCTTCEEEEEEEEEEEECCSSSCCEEEEEEEEEEEEEEEECTTEEEEEEEEE
T ss_pred ccccccchhhhhhcccCCCEEEECCCCCEeccEEEEeccccccccccccccccccceeeEEEEEEEEcCCcceEEEEEEE
Confidence 368999999999999 999876510 000 001123689999999999999999976
Q ss_pred CccCCCCCCcceeeecCCCCCCCCCCCccccC-CCCceeEeeceEEEEEEccCceEEEEEc-cCCcEEEEEEEEEEecc-
Q 002134 515 GFVGCDKAKPVKLKYSSDNSFSCPTPYACSKI-EGDVADIRNRHQILSFDVRHGLLQKISH-INGSQNVVEEEIDMYSS- 591 (961)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ieN~~~~v~fd~~~G~l~sl~~-k~g~~~~~~~~~~~Y~~- 591 (961)
..... ..... .. ..+...|||++++|+||+ +|.+ +|.+ ++|+++. +|.+|.+
T Consensus 535 ~~~~~----~~~~~----------------~~~~~~~~~leN~~~~v~~d~-~G~l-si~dk~~gr~~~---~~~~y~d~ 589 (923)
T 2wyh_A 535 GNETT----PSETV----------------SLYDDSNQCLENGFLKVMIQT-DGRL-TITDKQSGLIYQ---DLLRFEDC 589 (923)
T ss_dssp EC----------CC----------------CSEETTTTEEECSSEEEEECT-TSCE-EEEETTTCCEEE---EESEEEEE
T ss_pred CCCcc----ccccc----------------ccccCCCceEecCeEEEEEeC-CCCE-EEEECCCCeEEE---EEEEEeec
Confidence 43210 00000 00 224578999999999997 5998 6775 5788765 7888975
Q ss_pred -CCCCceeecCCCCCCccc--cCCceEE-EEECCceEEEEEeecc-----------------------cccCC------c
Q 002134 592 -QGSGAYLFMPNGDAHPIT--EAGGLMV-ISKGPLMEEAYSYPRT-----------------------AWERS------P 638 (961)
Q Consensus 592 -~~sgAYiF~P~~~~~~~~--~~~~~~~-v~~Gpl~~~v~~~~~~-----------------------~~~~~------~ 638 (961)
+.||||+|+|++.+.++. .....+. +++||++++|++.+.. ..+.+ +
T Consensus 590 ~d~~day~f~p~~~~~~~~~~~~~~~i~v~~~gpl~~~v~~~~~~~vP~~~~~~L~~~~~~~~~~~~r~~~~s~~~~~~~ 669 (923)
T 2wyh_A 590 GDIGNEYISRQPNHDQPFYADQGTIKLNIISNTAQVAELEIQQTFAIPISADKLLQAEMEAVIDITERQARRSQEKAELT 669 (923)
T ss_dssp ECCSCSSCCCCCTTCCCEEGGGSEEEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEE
T ss_pred CCCCCeeEEEcCCCCceeeccCCCceEEEEEcCCCEEEEEEEEEecCCccchhhhccccccccchhhhhhcccccccceE
Confidence 458999999998766653 2223444 4569999999987521 22322 5
Q ss_pred eEEEEEEecCCCccceeeEEEEEEeeeecCCCCCeEEEEEEEeeeCCCCeEEEeCCCCcccccccCCCC---CCCcceee
Q 002134 639 ISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKI---PLQGNYYP 715 (961)
Q Consensus 639 i~q~irLy~~~~~~~~~~iei~~~Vd~~~~~~~~~e~~~rf~t~i~s~~~fyTDsnG~~~~~R~~~~~~---pv~~NyYP 715 (961)
|+|+|+||++++ +|||+++|||++ .+|+++++|+|+|.++..|| | |||++++|++..+. ..++||||
T Consensus 670 i~q~i~L~~~~~-----~ie~~~~vd~~~---~~~~l~v~fpt~i~s~~~~~-d-~~fg~i~R~~~~~~~~w~~a~~~~p 739 (923)
T 2wyh_A 670 LTTLIRMEKNNP-----RLQFTTRFDNQM---TNHRLRVLFPTHLKTDHHLA-D-SIFETVKRPNHPDATFWKNPSNPQH 739 (923)
T ss_dssp EEEEEEEETTCS-----CEEEEEEEEECC---CSEEEEEEEECCCCCSEEEE-E-ETTEEEEEESSCCTTTCCCSCCCEE
T ss_pred EEEEEEEeCCCc-----eEEEEEEECCcc---CCEEEEEEeccccCCCCEEE-e-cCceEEEccCCCCCCCcccccceEe
Confidence 999999999987 799999999986 68999999999999998655 7 99999999976543 24899999
Q ss_pred ccceeEeecCCCceeEEeecCCcceecc-cCCeEEEEEeecc--ccCCCCCCCcCccCCc-eeeEEEEEEEeecccCCcc
Q 002134 716 MPALAFMQGSNGQRFSVHSRQSLGVASL-KDGWLEIMLDRRL--SRDDGRGLGQGVLDNR-AMNVVFHILVESNISSTSN 791 (961)
Q Consensus 716 ~~s~~~i~D~~~~~ltvltd~~~G~sSl-~~G~lElml~Rrl--~~DD~rGvge~l~d~~-~~~~~~~ll~e~~~~~~~~ 791 (961)
+.++|+|+|.+ .+++||||+++|++++ .+|+|+|||||++ +.| +|+ +|..+.. .....|.+-+.+... .
T Consensus 740 ~~~~v~l~d~~-~gvavlnd~~~g~~~~~~~~~i~LtLlRs~~~lg~--~G~-~p~p~a~~~G~h~f~yal~~~~g-~-- 812 (923)
T 2wyh_A 740 QECFVSLFDGE-NGVTIGNYGLNEYEILPDTNTIAITLLRSVGEMGD--WGY-FPTPEAQCLGKHSLSYSFESITK-Q-- 812 (923)
T ss_dssp CSSEEEEECSS-EEEEEEESSCCEEEEETTTTEEEEEEEEECSBCCT--TSC-CBCGGGGCCEEEEEEEEEEEEET-T--
T ss_pred eeeEEEEECCC-CcEEEEeCCccceEEecCCCeEEEEEecccccccc--CCc-ccCchhHhceEEEEEEEEcccCC-c--
Confidence 99999999985 8999999999999988 4899999999998 455 787 6654433 234455544432211 0
Q ss_pred cCCCCcccCcchhhhhccccccccceeeeccCCCCCcCCCCCCCcCCCCCCCCCceeEEeeecCCCCCCCCCCCCcccee
Q 002134 792 SISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQPPPRSFSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFV 871 (961)
Q Consensus 792 ~~~~~~~~~ps~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~LP~~vhLltl~~~~~~~~~~~~~~~~r~~ 871 (961)
. .. .....+..++.|+.++...... ......++.+... |.||+|.+|+...+.. .
T Consensus 813 -----~---~~-~~~~~a~~~~~Pl~~~~~~~~~----~~~~~~~s~l~~~-~~~v~l~alK~aed~~-----------~ 867 (923)
T 2wyh_A 813 -----T---QF-ASYWRAQEGQVPVITTQTNQHE----GTLAAEYSYLTGT-NDQVALTAFKRRLADN-----------A 867 (923)
T ss_dssp -----T---HH-HHHHHHHHTTSCCEEEECCSCC----CSBCSEEESCBCC-CTTEEEEEEEECTTTC-----------C
T ss_pred -----h---hH-HHHHHHHHHhCCHhheecCccc----CcCCccccceecC-CCCEEEEEEEEccCCC-----------c
Confidence 0 00 1123456788998877654221 1122334444333 7899999999865321 2
Q ss_pred eeeeeeccCcccccCCCCccccccccccchhhhcccCccceEEEccccCccccccccCCCCcccCCCCCCceEeccceee
Q 002134 872 LILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQ 951 (961)
Q Consensus 872 ~ll~~~~~d~~~~~~~~~~~~~~~~~~v~l~~lf~~~~v~~~~e~sL~~~~~~~~~~~~~~~~~~~~~~~~v~l~PmeIr 951 (961)
+|||..+.. +...| .+.+ .+.+..+.++.|..-. ...+ . .++|.|-||+
T Consensus 868 ~ilRl~n~~------g~~~~------~l~~-----~~~~~~~~~~~llE~~--~~~~-----------~-~~~l~p~ei~ 916 (923)
T 2wyh_A 868 LITRSYNLS------NDKTC------DFSL-----SLPNYNAKVTNLLEKD--SKQS-----------T-PSQLGKAEIL 916 (923)
T ss_dssp EEEEEEESC------SSCCE------ECCC-----BCTTEEEEEECTTCCB--CSCC-----------C-CSEECTTCEE
T ss_pred EEEEEecCC------CCcce------EEEe-----ccccceEEEeeccCcc--cccc-----------c-cceEcCcceE
Confidence 577764421 10011 1221 2345567777764311 1000 0 1789999999
Q ss_pred EEEEEEe
Q 002134 952 AYKLEMR 958 (961)
Q Consensus 952 tf~~~~~ 958 (961)
||+|+++
T Consensus 917 T~~l~~~ 923 (923)
T 2wyh_A 917 TLAWKKQ 923 (923)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9999864
No 3
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=100.00 E-value=9.5e-99 Score=936.60 Aligned_cols=619 Identities=16% Similarity=0.192 Sum_probs=475.5
Q ss_pred hHHHHHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchH
Q 002134 2 SYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSAT 81 (961)
Q Consensus 2 ~ff~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~ 81 (961)
.+|.+||.+++|+.+++||+||++|||| |||||||+||+++||||+||||++||+|+++ ||++|++||+|||||||++
T Consensus 58 ~~~~~~~~~~~p~~~~~vk~lv~~Gr~e-igg~~v~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~~D~FG~s~~ 135 (899)
T 3lvt_A 58 TIILDDYLQVRPEKKEAVKKAVQAGKLK-IGPFYILQDDFLISSESNVRNMLIGHLESQK-WGAPVQLGYFPDTFGNMGQ 135 (899)
T ss_dssp THHHHHHHHHCGGGHHHHHHHHHTTSEE-CCSBSSCCCGGGSCHHHHHHHHHHHHHHHHH-HTCCCCCEEESCCCT---T
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHcCCEE-ECchhccccccCCCHHHHHHHHHHHHHHHHH-cCCCCceeEeCCCCCCchH
Confidence 4688999999999999999999999999 8999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHcCCceeeeeccc----hHHHHHH--hhccceeEEEeecCCCCCCCceEEeecCCccCCCCCCCCCCCcccccc
Q 002134 82 MAYLLRRMGFENMLIQRTH----YELKKEL--ALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQF 155 (961)
Q Consensus 82 ~p~ll~~~G~~~~~~~R~~----~~~k~~~--~~~~~~eF~W~~s~~~~~gs~i~th~~~~y~Y~~p~~c~p~~~~c~~f 155 (961)
|||||+++||++++|+|++ |..++.. ...+.++|+|+ |+|||+||||++|+ +|+. |.
T Consensus 136 lp~i~~~~Gi~~~~~~Rg~~~~~~~~~k~~~~~~~p~~~F~W~----g~dGs~vlt~~~~~-~Y~~----g~-------- 198 (899)
T 3lvt_A 136 TPQMMQLANLPAAAFGRGVKPIGFDNQVLESDYSSQYSEMWWE----GPDQTKIFGLLFAN-WYSN----GN-------- 198 (899)
T ss_dssp HHHHHHTTTCCEEEEC---------------------CEEEEE----CTTSCEEEEEECCC-C--------C--------
T ss_pred HHHHHHHcCCCeEEEecccccccccccccccccCCCCceEEEE----CCCCCeEEEEECCC-cCcC----cc--------
Confidence 9999999999999999986 4433210 11246899999 67899999999985 6642 10
Q ss_pred cccccCccccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhHHHHHHHhHHHHHHHH
Q 002134 156 DFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYI 235 (961)
Q Consensus 156 df~~~~g~~~~~c~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~tn~il~~~GdDf~~~~~~~a~~~~~n~~kli~~i 235 (961)
. .+.+.+|++.+++.+++..++ .++++++|+|+|+||+.. ++||+++|+++
T Consensus 199 ---------------~---~p~~~~~~~~~~~~~~~~~~~---~~~t~~il~~~G~D~~p~--------~~~l~~~i~~~ 249 (899)
T 3lvt_A 199 ---------------E---IPSEKEAAIAFWKQKLADVER---YASTNHLLMMNGVDHQPV--------QRDITKAIALA 249 (899)
T ss_dssp ---------------C---SCSSHHHHHHHHHHHHHHHHH---HCSSSEEEEEEEEC--------------CHHHHHHHH
T ss_pred ---------------C---CCCcHHHHHHHHHHHHHHHHh---hcCCCeEEEeecCCCCch--------HHHHHHHHHHH
Confidence 0 123567887777666655443 458999999999998542 57999999999
Q ss_pred hcC-CCCceEEEeCCHHHHHHHHHHHhhhcccCCCCCCCCCCccCCCccccccccccccCCCcee-eeeccchhhhhHHH
Q 002134 236 NSN-PSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWS-GYYVSRPFFKAVDR 313 (961)
Q Consensus 236 N~~-~~~~~~v~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~lp~~~gDffpya~~~~~ywt-GyyTSRp~~K~~~R 313 (961)
|+. | .+++++||+++||++|+++. ...||+++||||++.++ ..||+ |||||||++|++||
T Consensus 250 n~~~p--~~~~~~st~~~yf~~l~~~~---------------~~~lp~~~GEl~~~~~~-G~yt~~~~~sSr~~~K~~nR 311 (899)
T 3lvt_A 250 NELFP--EYEFIHSNFDDYLKAVQEEL---------------PEDLGTVTGELTSQETD-GWYTLANTSSARVYLKQWNT 311 (899)
T ss_dssp HHHCS--SEEEEECCHHHHHHHHHHTC---------------C--CCEEECCC------------CGGGGBTHHHHHHHH
T ss_pred HhcCC--CceEEEcCHHHHHHHHHHhc---------------cccCCcccccccccccC-ceEEECCccccHHHHHHHHH
Confidence 974 4 68899999999999998742 13699999999962111 12333 44559999999999
Q ss_pred HHHHHHH-HHHHHHHHHhhcccccccCCCChhhHHHHHHHHHHhhhhccccccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 002134 314 VLEQTLR-ATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFM 392 (961)
Q Consensus 314 ~~e~~L~-~aE~l~ala~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTs~~~V~~Dy~~rl~~a~~~~~~v~ 392 (961)
++|++|+ +||+|+++|... +..|| .+.|+++||+|+++||||+|||||+++|++||..||.++.+.|+.++
T Consensus 312 ~~E~~L~~~aE~l~~la~~~-----g~~yp---~~~l~~~Wk~ll~~Q~HD~i~Gtsi~~V~~d~~~~~~~~~~~~~~l~ 383 (899)
T 3lvt_A 312 KVQRQLENIAEPLAAMAYEV-----TGDYP---HDQFDYAWKTLLQNHPHDSICGCSVDEVHRGMMTRFENANDVGHFLA 383 (899)
T ss_dssp HHHHHHHTTHHHHHHHHHHH-----HSCCC---HHHHHHHHHHHHTTCSTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-----CCCCc---HHHHHHHHHHHhccCCCCccCCcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 699999998653 45677 67899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccCCCCCcccccccccccCCCCcceeeeccCCceeEEEEEcCCCcceeEEEEEEEcC-----------
Q 002134 393 SKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNR----------- 461 (961)
Q Consensus 393 ~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpl~~~r~~~V~v~v~~----------- 461 (961)
+.+++.|+..... .. .. ++...++|||||+|+|+++|+|++..
T Consensus 384 ~~al~~l~~~~~~-------------------~~------~~-~~~~~v~vfN~l~~~r~~~V~v~v~~~~~~~~~~~~~ 437 (899)
T 3lvt_A 384 DEATRQLTEAIDT-------------------SV------FP-EKAHPFVLFNTSGYQKTEVVTVEVEIERLPFYTGKPE 437 (899)
T ss_dssp HHHHHHHHHTBCC-------------------TT------SC-TTCEEEEEEECSSSCEEEEEEEEEEEEEEEGGGSCHH
T ss_pred HHHHHHHHhhccc-------------------cc------CC-CCCCEEEEEeCCCceeeeEEEEEEEccccccccccch
Confidence 9999999764210 00 00 13468999999999999999999864
Q ss_pred -----------CcEEEEcCCCcEeeEeeccccccC-----cc----ccccCceEEEEEE-ecCCCeeEEEEEEeCccCCC
Q 002134 462 -----------PDITVLDSNWTCVQSQISPELRHG-----KS----KIFTGRHRLHWKA-TIPALGLQVYYIANGFVGCD 520 (961)
Q Consensus 462 -----------~~~~V~d~~g~~v~~Qi~~~~~~~-----~~----~~~~~~~~l~f~a-~vPplG~~ty~i~~~~~~~~ 520 (961)
+.+.|.|.+|++|++|+.+..... .. ......++|.|.| +||||||++|.|.......
T Consensus 438 ~~~~~~~~~~~~~~~v~d~~G~~v~~qv~~~~~~~~~~l~~~~~~~~~~~~~~~l~f~a~~vPalGy~~~~i~~~~~~~- 516 (899)
T 3lvt_A 438 DLYHELKQKATPDYQVIDPTGKAVASRIVKEDVRFGYDLPKDAFRQPYMAKYLTVELSVKEMAPFSWDSFALIQGETKA- 516 (899)
T ss_dssp HHHHHHHHSCCCCEEEECSSSCEECCEEEEEEEEEEECCC-----CEEEEEEEEEEEEEEEECTTEEEEEEEEESCCCC-
T ss_pred hhhhhhccccCCceEEECCCCCEEeEEEeeccccccccccccccccccccceEEEEEEecCCCCCCCEEEEEEecCccc-
Confidence 679999999999999998764310 00 0012245788988 9999999999998753210
Q ss_pred CCCcceeeecCCCCCCCCCCCccccCCCCceeEeeceEEEEEEccCceEEEEEc-cCCcEEEEEEEEEEecc--CCCCce
Q 002134 521 KAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKISH-INGSQNVVEEEIDMYSS--QGSGAY 597 (961)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~fd~~~G~l~sl~~-k~g~~~~~~~~~~~Y~~--~~sgAY 597 (961)
.. ... ....+...|||++|+|+||+ +|.| +|.+ ++|+++. ++.+|.+ +.+|+|
T Consensus 517 ---~~-------------~~~---~~~~~~~~leN~~~~v~~d~-~G~l-sl~Dk~~gre~~---~~~~~~d~gd~g~~Y 572 (899)
T 3lvt_A 517 ---FE-------------GSL---LAQPATNEMENEFIQVKIEN-NGSL-TIADKKTGETFS---KLLTFEDTGDIGNEY 572 (899)
T ss_dssp ---CC-------------SCC---SEETTTTEEECSSEEEEECT-TSCE-EEEETTTCCEEE---EETEEEEEECCSBTT
T ss_pred ---cc-------------ccc---cccccCcEEecCcEEEEEcC-CCcE-EEEECCCCeEEE---EEEEEecCCCCCCce
Confidence 00 000 00114578999999999997 7999 6775 5788764 5777764 458999
Q ss_pred eecCCCCCCccccCC--ceE-EEEECCceEEEEEeeccc-----------------------ccCC------ceEEEEEE
Q 002134 598 LFMPNGDAHPITEAG--GLM-VISKGPLMEEAYSYPRTA-----------------------WERS------PISHSTRL 645 (961)
Q Consensus 598 iF~P~~~~~~~~~~~--~~~-~v~~Gpl~~~v~~~~~~~-----------------------~~~~------~i~q~irL 645 (961)
+|+|+..+.++.... ..+ ++++||++++|++..... .+++ +|+|+|+|
T Consensus 573 ~~~p~~~d~~~~~~~~~~~v~v~e~gpl~~~v~v~~~~~~P~~~~~~~~~~~~~~~~~~~r~~~~S~~~~~~~i~q~i~L 652 (899)
T 3lvt_A 573 IFFKPTEDQGITTENVTAEITNKENSPVKASYQIKQTVMLPVAADERLEEEQKAVREFRERLAQRSTTLRPFEITTMVTM 652 (899)
T ss_dssp BCCCCTTCCCEESTTCCCEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEE
T ss_pred eecCCcCCceeeccCCCceEEEEEcCCCEEEEEEEEEEccccchhhhhcccccccccchhhhhcccccccceEEEEEEEE
Confidence 999987666654332 333 557999999999764321 2334 79999999
Q ss_pred ecCCCccceeeEEEEEEeeeecCCCCCeEEEEEEEeeeCCCCeEEEeCCCCcccccccCCCC--CCCcceeeccceeEee
Q 002134 646 YNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKI--PLQGNYYPMPALAFMQ 723 (961)
Q Consensus 646 y~~~~~~~~~~iei~~~Vd~~~~~~~~~e~~~rf~t~i~s~~~fyTDsnG~~~~~R~~~~~~--pv~~NyYP~~s~~~i~ 723 (961)
|++++ +|||+++|||.. .+|+++++|+++|.++.++|+. +|++++|++..+. ..++++||+.+++.|.
T Consensus 653 ~~~~~-----~id~~~~Vdw~~---~~~~Lrv~Fp~~i~s~~~~~d~--~fG~i~Rpt~~~t~We~a~~e~~~~~~vdls 722 (899)
T 3lvt_A 653 IKESN-----QLFFETTINNQI---KDHRLRVLFPTGMVTETHEADS--IYEVVTRPNQVSDTWENPTNPQHQQAFVNVH 722 (899)
T ss_dssp ETTCC-----CEEEEEEEEECC---CSEEEEEEECCSCCCSEEEEEC--SSSEEEEEC-------CCCCCEECSSEEEEE
T ss_pred eCCCC-----EEEEEEEECCCc---CCEEEEEECCCCCCcCceEEec--cceEEECCCCCCccccCCCcceeeeeEEEEe
Confidence 99987 799999999975 6899999999999999988765 5559999975432 2478999999999999
Q ss_pred cCCCceeEEeecCCcceecccCCeEEEEEeecc
Q 002134 724 GSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRL 756 (961)
Q Consensus 724 D~~~~~ltvltd~~~G~sSl~~G~lElml~Rrl 756 (961)
|.+ .+++|+||+++|++++.+|.|+|||+|+.
T Consensus 723 d~~-~Gvavlnd~~~gy~v~~d~~i~LTLlRs~ 754 (899)
T 3lvt_A 723 DQN-KGVTIFNEGLNEYEVLADGTIAVTLIRCV 754 (899)
T ss_dssp CSS-CEEEEEESSCCEEEECTTCCEEEEEEEEC
T ss_pred cCC-ceEEEEeCCCcceeEcCCCEEEEEEeccc
Confidence 985 89999999999998877899999999987
No 4
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=100.00 E-value=6.2e-56 Score=470.85 Aligned_cols=250 Identities=25% Similarity=0.383 Sum_probs=215.2
Q ss_pred ceeEeeceEEEEEEccCceEEEEEc-cCCcEEEEEEEEEEeccC--------CCCceeecCCCCCCccccCCceEEEEEC
Q 002134 550 VADIRNRHQILSFDVRHGLLQKISH-INGSQNVVEEEIDMYSSQ--------GSGAYLFMPNGDAHPITEAGGLMVISKG 620 (961)
Q Consensus 550 ~~~ieN~~~~v~fd~~~G~l~sl~~-k~g~~~~~~~~~~~Y~~~--------~sgAYiF~P~~~~~~~~~~~~~~~v~~G 620 (961)
.+.|+|++++++||+.+|+|+++++ ++|.+..+.++|.+|.+. .||||+|+|++.+.+.......+.+++|
T Consensus 2 ~~~i~n~~~~l~fd~~tG~L~si~~~~~g~~~~v~q~f~~Y~s~~g~~~~~~~SGAYiFrP~g~~~~~~~~~~~~~v~~G 81 (282)
T 1o7d_D 2 DLVIQNEYLRARFDPNTGLLMELENLEQNLLLPVRQAFYWYNASTGNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVKA 81 (282)
T ss_dssp CCEEECSSEEEEECTTTCSEEEEEEC---CEEECEEEEEEEEBCCCBTTBSCCCCSSCCCBSSSSCEESCSCCEEEEEEC
T ss_pred cEEEcCceEEEEECCCCCcEEEEEEcCCCeEEEEeEEEEEEecccCCCCCCCCCceEEecCCCCCCcccCCCcEEEEEEC
Confidence 3679999999999998899999995 578999999999999865 7999999999976544444567889999
Q ss_pred CceEEEEEeecccccCCceEEEEEEecCCCccceeeEEEEEEeeeecC-CCCCeEEEEEEEeeeCCCCeEEEeCCCCccc
Q 002134 621 PLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSH-NFNDRELIVRYKTDIDNKRIFYSDLNGFQMS 699 (961)
Q Consensus 621 pl~~~v~~~~~~~~~~~~i~q~irLy~~~~~~~~~~iei~~~Vd~~~~-~~~~~e~~~rf~t~i~s~~~fyTDsnG~~~~ 699 (961)
||+++|++.+ ..|++|++|||++.. .||++|+|+++|. +..|||+++||+|+|+|++.||||+||+||+
T Consensus 82 ~lv~eV~~~~-----~~~~sq~~Rly~~~~-----~vE~e~~Vgpipi~d~~~kEiv~r~~T~i~s~~~FYTDsNG~e~~ 151 (282)
T 1o7d_D 82 SLVQEVHQNF-----SAWCSQVVRLYPRQR-----HLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREIL 151 (282)
T ss_dssp SSCEEEEEEE-----ETTEEEEEEECTTCS-----SEEEEEEECCCCCTTSCCEEEEEEEECCCCCTTEEEEESTTSSEE
T ss_pred CEEEEEEEEE-----CCcEEEEEEEecCCc-----eEEEEEEEccccccCCCCcEEEEEEEeeeccCCeEEECCCCceee
Confidence 9999999975 247999999999976 6999999999984 6679999999999999999999999999999
Q ss_pred ccccCC--------CCCCCcceeeccceeEeecCCCceeEEeecCCcceecccCCeEEEEEeeccccCCCCCCCcCccCC
Q 002134 700 RRETYD--------KIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDGRGLGQGVLDN 771 (961)
Q Consensus 700 ~R~~~~--------~~pv~~NyYP~~s~~~i~D~~~~~ltvltd~~~G~sSl~~G~lElml~Rrl~~DD~rGvge~l~d~ 771 (961)
||.+.. ++|++||||||+++|||+|++ .||+||+||++||||+++|+||||||||+++||+|||||||+|+
T Consensus 152 kR~~~~r~~~~~~~~~pv~gNYYPv~s~~~IqD~~-~rltvl~drs~G~sSl~~G~lElMlhRRl~~DD~rGvge~l~d~ 230 (282)
T 1o7d_D 152 ERRRNYRPTWKLNQTEPVAGNYYPVNSRIYITDGN-MQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEPLNKE 230 (282)
T ss_dssp EEETTCCSSSCCCCSCTTGGGCEEESSEEEEECSS-EEEEEEESSCEEECCSSTTEEEEEEEEECSSCCSSSCCSCSCCC
T ss_pred EEEeccccccccccccCcccceeeeeeEEEEEcCC-eEEEEEecccccccccCCCeEEEEEeeecccccccccccccccc
Confidence 997532 689999999999999999986 89999999999999999999999999999999999999999998
Q ss_pred ---ceeeEEEEEEEeecccCCcccCCCCcccCcchhhhhccccccccceeeeccC
Q 002134 772 ---RAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKK 823 (961)
Q Consensus 772 ---~~~~~~~~ll~e~~~~~~~~~~~~~~~~~ps~~~~~~~~~l~~p~~~~~~~~ 823 (961)
..+..+++|+++....+ ....|..++.+.+|+++|+++.
T Consensus 231 ~~gl~v~g~~~l~l~~~~~~-------------~~~~r~~~~~~~~p~~~~fs~~ 272 (282)
T 1o7d_D 231 GSGLWVRGRHLVLLDKKETA-------------AARHRLQAEMEVLAPQVVLAQG 272 (282)
T ss_dssp GGGGSEEEEEEEEEEEHHHH-------------HHHHHHHHHHHHSCCEEEEEEC
T ss_pred CCCeEEEEEEEEEEeCcccc-------------hhhhhHHHHhhhCchhhheecC
Confidence 35677889999754320 1123556778999999988754
No 5
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=100.00 E-value=1.9e-55 Score=477.11 Aligned_cols=217 Identities=35% Similarity=0.712 Sum_probs=196.5
Q ss_pred hHHHHHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCC--CcccEeeCCCCCc
Q 002134 2 SYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFI--PKNSWAIDPFGYS 79 (961)
Q Consensus 2 ~ff~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~--p~v~W~iDpFGhs 79 (961)
+||++||++++|+.+++||+||++||||||||||||+|||++||||+||||++||+|++++||+. |++||+|||||||
T Consensus 73 ~~~~~w~~~~~Pe~~~~vk~lV~~Grle~vgG~wve~D~~~~~~eslirQl~~G~~~~~~~fG~~~~~~~~W~pD~FG~s 152 (298)
T 1o7d_A 73 AFFSRWWRQQTNATQKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQMTLGLRFLEETFGSDGRPRVAWHIDPFGHS 152 (298)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHTTSEEESSCSSSCBCSSSCCHHHHHHHHHHHHHHHHHHHGGGGCCSEEEESSSSSCC
T ss_pred hHhHHHHHhcCHHHHHHHHHHHHCCCEEEECceeeccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCceeEeCCCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999997 9999999999999
Q ss_pred hHHHHHHHHcCCceeeeeccchHHHHHHhhccceeEEEeecCCCC-CCCceEEeecCCccCCCCCCCCCCCccccccccc
Q 002134 80 ATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTE-ETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFA 158 (961)
Q Consensus 80 ~~~p~ll~~~G~~~~~~~R~~~~~k~~~~~~~~~eF~W~~s~~~~-~gs~i~th~~~~y~Y~~p~~c~p~~~~c~~fdf~ 158 (961)
+++|+||+++||++++++|++|++|+.+...+.+||+|+++++.. |||+||||++| ++|+ |++++| ||+
T Consensus 153 ~~lP~il~~~Gi~~~~~~R~~~~~~~~~~~~~~~eF~W~g~~~~~~dgs~i~t~~~~-~~Y~------~~~g~~--fd~- 222 (298)
T 1o7d_A 153 REQASLFAQMGFDGFFFGRLDYQDKKVRKKTLQMEQVWRASTSLKPPTADLFTSVLP-NMYN------PPEGLC--WDM- 222 (298)
T ss_dssp HHHHHHHHHHTCCEEEESCCCHHHHHHHHHTTCSEEEEECCSSSCTTTTEEEEEECS-STTS------CCTTCC--CST-
T ss_pred HHHHHHHHHcCCCeEEEEecccccccccccCCCceEEEECCCCCCCCCCeEEEEEeC-CCCC------CCCCcc--ccc-
Confidence 999999999999999999999999998777788999999888766 89999999999 4774 557898 886
Q ss_pred ccCccccccCCCCCCCC----CCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhHHHHHHHhHHHHHHH
Q 002134 159 RMGGFFYEACPWRQNPV----ETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDY 234 (961)
Q Consensus 159 ~~~g~~~~~c~~~~~p~----~~~~~nv~~r~~~~~~~~~~~~~~~~tn~il~~~GdDf~~~~~~~a~~~~~n~~kli~~ 234 (961)
.| .++|. .++++||++|++.+++++++++++|+||+||+|+|+||+|++ |+.||+||+|||+|
T Consensus 223 --------~~--~~~p~~~~~~~~~~nv~~r~~~~~~~~~~~a~~~~t~~vl~p~G~Df~~~~---a~~~f~n~~~li~~ 289 (298)
T 1o7d_A 223 --------LC--ADKPVVEDTRSPEYNAKELVRYFLKLATDQGKLYRTKHTVMTMGSDFQYEN---ANTWFKNLDKLIQL 289 (298)
T ss_dssp --------TC--CCCCCCCCTTSTTCCHHHHHHHHHHHHHHHHTTSSSSEEEEEECCBTCCTT---HHHHHHHHHHHHHH
T ss_pred --------cc--CCcCccCCccchHHHHHHHHHHHHHHHHHHHhhcCCCcEEeccCCCCCccc---hhHHHHHHHHHHHH
Confidence 34 23332 456899999999999999999999999999999999999976 77889999999999
Q ss_pred HhcCCCC
Q 002134 235 INSNPSL 241 (961)
Q Consensus 235 iN~~~~~ 241 (961)
||+++++
T Consensus 290 iN~~~~~ 296 (298)
T 1o7d_A 290 VNAQQRA 296 (298)
T ss_dssp HHC----
T ss_pred HhhcCcc
Confidence 9998753
No 6
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6
Probab=99.96 E-value=2.2e-28 Score=243.13 Aligned_cols=148 Identities=24% Similarity=0.412 Sum_probs=122.3
Q ss_pred HHHHHHHhhhhccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcccccccccccCCCCcc
Q 002134 349 LTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVH 428 (961)
Q Consensus 349 l~~a~~~l~l~QhHDaItGTs~~~V~~Dy~~rl~~a~~~~~~v~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (961)
|++|||+|+++||||+||||++++|++||..||.++++.++.+++.+++.|+.... .|..|.. .+.+.||.+
T Consensus 3 L~~~~k~l~~~QhHDaItGts~~~V~~Dy~~rl~~~~~~~~~l~~~~l~~L~~~~~-------~~~~~~~-ln~~~~~~~ 74 (159)
T 1o7d_C 3 SAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLSEGWRPCEVLMSNALAHLSGLKE-------DFAFCRK-LNISICPLT 74 (159)
T ss_dssp SHHHHHHHHHTTBTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS-------CEECCTT-GGGTCCHHH
T ss_pred HHHHHHHHhCcccCCcCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-------ccccccc-cccccCccc
Confidence 67899999999999999999999999999999999999999999999999875321 2333322 122333322
Q ss_pred eeeeccCCceeEEEEEcCCCcceeEEEEEEEcCCcEEEEcCCCcEeeEeeccccccCccccccCceEEEEEEecCCCeeE
Q 002134 429 KVINVHEGTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQ 508 (961)
Q Consensus 429 ~~~~~~~~~~~~vvvfNpl~~~r~~~V~v~v~~~~~~V~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~l~f~a~vPplG~~ 508 (961)
. .++...|+|||||+|+|+++|+++|+.+.+.|+|.+|++|++|+.|.+.. ...+|.|.++||||||+
T Consensus 75 ~-----~~~~~~vvvfN~l~~~r~~~V~v~v~~~~~~v~d~~G~~v~~qi~~~~~~-------~~~~l~f~a~vP~lG~~ 142 (159)
T 1o7d_C 75 Q-----TAERFQVIVYNPLGRKVDWMVRLPVSKHVYLVKDPGGKIVPSDVVTIPSS-------DSQELLFSALVPAVGFS 142 (159)
T ss_dssp H-----HCSEEEEEEEECSSSCEEEEEEEEECSSCEEEECSSSCEECCEEEEETTT-------TEEEEEEEEEECTTEEE
T ss_pred c-----CCccEEEEEECCCCceEeEEEEEEEcCCcEEEEcCCCCEeeeEEEeccCC-------CceEEEEEeecCCceeE
Confidence 1 13457899999999999999999999999999999999999999987642 23579999999999999
Q ss_pred EEEEEeCc
Q 002134 509 VYYIANGF 516 (961)
Q Consensus 509 ty~i~~~~ 516 (961)
+|+|..+.
T Consensus 143 ty~i~~~~ 150 (159)
T 1o7d_C 143 IYSVSQMP 150 (159)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 99998753
No 7
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1
Probab=99.88 E-value=1.6e-23 Score=179.39 Aligned_cols=74 Identities=27% Similarity=0.471 Sum_probs=68.8
Q ss_pred ceEEEeCCHHHHHHHHHHHhhhcccCCCCCCCCCCccCCCccccccccccccCCCceeeeeccchhhhhHHHHHHHHHHH
Q 002134 242 NAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRA 321 (961)
Q Consensus 242 ~~~v~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~lp~~~gDffpya~~~~~ywtGyyTSRp~~K~~~R~~e~~L~~ 321 (961)
+++|+||||+|||++|++.. ..||+++||||||+|++++||||||||||.+|+++|++++.||+
T Consensus 2 ~v~v~ysT~s~Yf~al~~~~----------------~~~p~~~~DFfpYad~~~~yWtGyyTSRp~lK~~~R~~~~~L~~ 65 (84)
T 1o7d_B 2 RVNVLYSTPACYLWELNKAN----------------LSWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLSYNFLQV 65 (84)
T ss_dssp CEEEEECCHHHHHHHHHHTC----------------CCBCEECSCCCSCCSBTTBCSCGGGTSCHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHhC----------------CCCcccCCCcccccCCCCCcceeeeeCCHHHHHHHHHHHHHHHH
Confidence 68999999999999998741 46999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh
Q 002134 322 TEMMVALLLG 331 (961)
Q Consensus 322 aE~l~ala~~ 331 (961)
||+|.+++..
T Consensus 66 ae~L~~la~~ 75 (84)
T 1o7d_B 66 CNQLEALAGP 75 (84)
T ss_dssp HHHHHHHSCC
T ss_pred HHHHHHHHhh
Confidence 9999998743
No 8
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=99.80 E-value=2.9e-20 Score=174.07 Aligned_cols=110 Identities=20% Similarity=0.264 Sum_probs=80.0
Q ss_pred CCcCCCCCCCCCceeEEeeecCCCCCCCCCCCCccceeeeeeeeccCcccccCCCC---ccccccccccchhhhcccCcc
Q 002134 834 RSFSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRS---QCVSVVDEPLNLFSMFKGLAI 910 (961)
Q Consensus 834 ~~~s~l~~~LP~~vhLltl~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~---~~~~~~~~~v~l~~lf~~~~v 910 (961)
.+|+++..+||||||||||++|.+.. ++||.+|+ | +.+++ .|+ .+++|||++||..|+|
T Consensus 3 ~~~s~l~~~LP~nvhLlTLe~~~~~~------------iLlRl~hl---~-e~~ed~~~~~s--~pv~v~l~~lF~~~~i 64 (126)
T 1o7d_E 3 TQFSGLRRELPPSVRLLTLARWGPET------------LLLRLEHQ---F-AVGEDSGRNLS--SPVTLDLTNLFSAFTI 64 (126)
T ss_dssp CEECSBSSCCCTTCEEEEEEEEETTE------------EEEEEECC---C-CTTTTTTTTCS--SCEEEECSSSBSSSEE
T ss_pred cccCcccccCCCcEeEEEEEEcCCCc------------EEEEEEee---c-ccccCcccccC--cceEEeHHHhhccccc
Confidence 56999999999999999999997643 34455554 3 23333 332 3568999999999999
Q ss_pred ceEEEccccCccccccccCCCCcccC--------C-CCCCceEeccceeeEEEEEEeeCC
Q 002134 911 LNAKATSLNLLNDDIGMLGYPEQLED--------V-SQDGQVTIAPMEIQAYKLEMRPNE 961 (961)
Q Consensus 911 ~~~~e~sL~~~~~~~~~~~~~~~~~~--------~-~~~~~v~l~PmeIrtf~~~~~~~~ 961 (961)
.+|+||+|++++...++.+|+|+... . ..+..|+|.|||||||+|++++++
T Consensus 65 ~~i~EttLtgn~~~~~~~Rl~w~~~~~~~~~~~~~~~~~~~vtL~PmEIRTFii~~~~~~ 124 (126)
T 1o7d_E 65 TNLRETTLAANQLLAYASRLQWTTDTGPTPHPSPSRPVSATITLQPMEIRTFLASVQWEE 124 (126)
T ss_dssp EEEEEECTTSSSBGGGCCCCCCCBC--------------CEEEECTTCEEEEEEEEEC--
T ss_pred ceEEEEccccccccccccccccccCCCCcccccccCCCCceEEEcCccEEEEEEEEEecc
Confidence 99999999998876555555554321 1 224589999999999999998764
No 9
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=99.39 E-value=7.4e-12 Score=149.81 Aligned_cols=96 Identities=22% Similarity=0.301 Sum_probs=91.8
Q ss_pred hHHHHHhhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchH
Q 002134 2 SYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSAT 81 (961)
Q Consensus 2 ~ff~~Ww~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~ 81 (961)
+.+..|+++.+|+..+++|+|+++||+|++||+|+.+|..+++.|++++|+.+|.++++ .||++|+..|.||. |+++.
T Consensus 52 ~~ll~~l~~~~p~l~~~ik~l~~~G~vE~l~~~~~Hpi~~l~p~e~~~~QI~~g~~~~~-~FG~~P~G~WlPE~-~ys~~ 129 (659)
T 1k1x_A 52 GPLLEWIEENKPDYLDLLRSLIKRGQLEIVVAGFYEPVLAAIPKEDRLVQIEMLKDYAR-KLGYDAKGVWLTER-VWQPE 129 (659)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHTTCEEEEBCCTTCCCGGGSCHHHHHHHHHHHHHHHH-HTTCCCCEEECGGG-CBCTT
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHCCCEEEEccCcccccccCCCHHHHHHHHHHHHHHHH-HcCCCCCEEECccc-ccChh
Confidence 35678999999999999999999999999999999999999999999999999999999 99999999999999 59999
Q ss_pred HHHHHHHcCCceeeeecc
Q 002134 82 MAYLLRRMGFENMLIQRT 99 (961)
Q Consensus 82 ~p~ll~~~G~~~~~~~R~ 99 (961)
+|++|+++||+++++.--
T Consensus 130 l~~iL~~~Gi~y~~td~~ 147 (659)
T 1k1x_A 130 LVKSLREAGIEYVVVDDY 147 (659)
T ss_dssp HHHHHHHTTCCEEEEEHH
T ss_pred HHHHHHHcCCcEEEECch
Confidence 999999999999999864
No 10
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A
Probab=98.87 E-value=9.1e-08 Score=109.77 Aligned_cols=90 Identities=19% Similarity=0.209 Sum_probs=84.0
Q ss_pred hhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCC-CHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCch------
Q 002134 8 WRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANS-HYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSA------ 80 (961)
Q Consensus 8 w~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~-~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~------ 80 (961)
|+...++.-+.+|+|++.|++||++++|.-+--.+. .-+++..|+..|.+.+++.||.+|+..|.+.. |+++
T Consensus 137 ~~~~~~dii~~fr~L~~~G~iEiit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~~ 215 (540)
T 3p0b_A 137 FQRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWAQIKTGVSTYRRHFAKDPTGFWLPEM-AYRPKGPWKP 215 (540)
T ss_dssp HHHTTTCHHHHHHHHHHHTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCCBEECGGG-CBCCSEEECC
T ss_pred HHHhhHHHHHHHHHHHHCCCEEEEcCCchhhHHhcCCCHHHHHHHHHHHHHHHHHHhCCCCCEEECccc-ceeCcccccc
Confidence 345688899999999999999999999999999988 58999999999999999999999999999998 9998
Q ss_pred -----------HHHHHHHHcCCceeeeec
Q 002134 81 -----------TMAYLLRRMGFENMLIQR 98 (961)
Q Consensus 81 -----------~~p~ll~~~G~~~~~~~R 98 (961)
.+..+|+++||+++++--
T Consensus 216 ~~~~~~~~~~~~l~~~L~~~Gi~y~~vd~ 244 (540)
T 3p0b_A 216 PVEGPPEGVRPGVDELLMRAGIRYTFVDA 244 (540)
T ss_dssp SSSCSCCEEECCHHHHHHHTTCCEEEECT
T ss_pred ccccccccchhhHHHHHHHcCCeEEEECc
Confidence 999999999999999854
No 11
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A*
Probab=98.74 E-value=4.5e-07 Score=104.56 Aligned_cols=90 Identities=18% Similarity=0.305 Sum_probs=83.9
Q ss_pred hhccCHHHHHHHHHHHHcCCeEEEceeeeecccCCCC-HHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCch------
Q 002134 8 WRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSH-YFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSA------ 80 (961)
Q Consensus 8 w~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~-~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~------ 80 (961)
|+...++.-.++|+|++.|++||++++|.-+--.+.. -+++..|+..|.+.++++||.+|+..|.+.. ++++
T Consensus 116 ~~~~~~dii~~fr~L~~~G~iElit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~~ 194 (562)
T 3n98_A 116 WKAINGDIIGKLRELQDQGYVEVITSAATHGYLPLLGRDEAIRAQIANGVATYEKHFGMKPKGIWLPEC-AYRPAGEWEL 194 (562)
T ss_dssp HHHTTTCHHHHHHHHHHTTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCSBEECGGG-CBCCSEEEEC
T ss_pred HHHhhhHHHHHHHHHHHCCCEEEEcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCCCCCEEECccc-ceeCcccccc
Confidence 3556888999999999999999999999999998875 7999999999999999999999999999998 9998
Q ss_pred ---------HHHHHHHHcCCceeeeec
Q 002134 81 ---------TMAYLLRRMGFENMLIQR 98 (961)
Q Consensus 81 ---------~~p~ll~~~G~~~~~~~R 98 (961)
.+..+|+++||+++++--
T Consensus 195 ~~~~~~~~~~i~~~L~~~Gi~y~~vd~ 221 (562)
T 3n98_A 195 PGGRKVKRQGIEKFLEEFGLRYFFVES 221 (562)
T ss_dssp GGGCEEEECCHHHHHHTTTCCEEEECH
T ss_pred ccccccchhhHHHHHHHcCCeEEEECc
Confidence 999999999999999854
No 12
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4
Probab=98.35 E-value=2.5e-05 Score=91.15 Aligned_cols=87 Identities=17% Similarity=0.189 Sum_probs=78.0
Q ss_pred cCHHHHHHHHHHHHcCCeEEEceeeeecccCCCC--HHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHHHHHHHH
Q 002134 11 SSESQRASFTNLVKNGQLEIVGGGWVMNDEANSH--YFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRR 88 (961)
Q Consensus 11 ~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~--~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~p~ll~~ 88 (961)
..++.-..+|+|++.|++|+++++|.-+=-.+.. -++...|+..|.+.+++.||.+|+..|.+-. +.+..+..+|++
T Consensus 120 ~~~~li~~~r~L~~~G~vEll~~~y~H~ilPLl~d~~ed~~~QI~~g~~~~~~~FG~~P~G~WlpE~-a~~~~l~~~l~~ 198 (528)
T 2b5d_X 120 YDGNILEGFKKYQETGKLEIVTCNATHAFLPLYQMYPEVVNAQITVGVKNYEKHMKKHPRGIWLAEC-GYYQGLDLYLAQ 198 (528)
T ss_dssp TTTCTHHHHHHHHHHTSEEEEEECTTCBCGGGGTTCHHHHHHHHHHHHHHHHHHHSSCCSEEECGGG-CBCTTHHHHHHH
T ss_pred HhHHHHHHHHHHHHCCCEEEEcCchhhHHHHhcCCCHHHHHHHHHHHHHHHHHHhCCCCCEEECchh-ccChhHHHHHHH
Confidence 3455568899999999999999999887665544 6999999999999999999999999999986 999999999999
Q ss_pred cCCceeeeec
Q 002134 89 MGFENMLIQR 98 (961)
Q Consensus 89 ~G~~~~~~~R 98 (961)
+||+++++.=
T Consensus 199 ~Gi~y~i~d~ 208 (528)
T 2b5d_X 199 NNVEYFFVDS 208 (528)
T ss_dssp TTCCEEEECT
T ss_pred cCCeEEEECc
Confidence 9999999865
No 13
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6
Probab=94.22 E-value=2.2 Score=46.27 Aligned_cols=79 Identities=19% Similarity=0.134 Sum_probs=67.9
Q ss_pred HHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHHHHHHHHcC-Cceee
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMG-FENML 95 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~p~ll~~~G-~~~~~ 95 (961)
+.+|+++++| .||-+=+|.-.+-..-+.+.+.++|..+.+.|++..|..|+ +|- +-.++..+..+++++| |.+-.
T Consensus 116 ~~v~~i~~~G-hEIg~H~~~H~~~~~ls~~~~~~ei~~~~~~l~~~~G~~p~-g~r--~g~~s~~t~~ll~e~G~f~Yds 191 (321)
T 3s6o_A 116 ELARAFVELG-HEIACHGWRWIHYQDMTPEREAEHMRLGMEAIERVTGVRPL-GWY--TGRDSPNTHRLVAEYGGFLYDS 191 (321)
T ss_dssp HHHHHHHHTT-CEEEECCSSCSCCTTCCHHHHHHHHHHHHHHHHHHHSCCCC-EEC--CSSCCTTHHHHHHHHCCCSEEC
T ss_pred HHHHHHHHcC-CEEeeCCccccccccCCHHHHHHHHHHHHHHHHHHhCCCcc-cEE--CCCCCHHHHHHHHHcCCeEEEE
Confidence 5789999999 78988899988888889999999999999999999998876 455 3457889999999999 99887
Q ss_pred eecc
Q 002134 96 IQRT 99 (961)
Q Consensus 96 ~~R~ 99 (961)
-.+.
T Consensus 192 s~~~ 195 (321)
T 3s6o_A 192 DHYG 195 (321)
T ss_dssp CCCS
T ss_pred eccC
Confidence 6664
No 14
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=87.58 E-value=1.2 Score=47.97 Aligned_cols=79 Identities=19% Similarity=0.155 Sum_probs=67.0
Q ss_pred HHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHHHHHHHHcC-Cceee
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMG-FENML 95 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~p~ll~~~G-~~~~~ 95 (961)
+.+|+++++| .||-+=+|.-.+-...+.+.+.++|..+.+.|++.+|..|+ +|-. | .++..+..++++.| |.+..
T Consensus 111 ~~v~~i~~~G-heIg~Ht~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G~~p~-g~r~-~-~~~~~~~~~l~~~G~~~y~s 186 (308)
T 3cl6_A 111 DVIRAMVAAG-HEICSHGYRWIDYQYMDEAQEREHMLEAIRILTELTGERPL-GWYT-G-RTGPNTRRLVMEEGGFLYDC 186 (308)
T ss_dssp HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHHHHHHHHSSCCS-EECC-S-SCCTTHHHHHHHHCCCSEEC
T ss_pred HHHHHHHHcC-CEEEeCCCCCcccccCCHHHHHHHHHHHHHHHHHHhCCCcc-eEEC-C-CCCHHHHHHHHHCCCceEEe
Confidence 5799999999 68999999887777789999999999999999999998876 5664 3 56888999999999 98876
Q ss_pred eecc
Q 002134 96 IQRT 99 (961)
Q Consensus 96 ~~R~ 99 (961)
-.+.
T Consensus 187 s~~~ 190 (308)
T 3cl6_A 187 DTYD 190 (308)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 6553
No 15
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=84.93 E-value=2 Score=42.75 Aligned_cols=74 Identities=15% Similarity=0.176 Sum_probs=61.7
Q ss_pred HHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCc-hHHHHHHHHcCCce
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYS-ATMAYLLRRMGFEN 93 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs-~~~p~ll~~~G~~~ 93 (961)
+.+|+++++| .||-+=+|.-++-..-+.+.+.+++....+.|++..|..|+ +--=|+|.. ..+..+++++|+..
T Consensus 47 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~--~fr~P~G~~~~~~~~~~~~~G~~~ 121 (195)
T 2cc0_A 47 SLVRAQVDAG-MWVANHSYTHPHMTQLGQAQMDSEISRTQQAIAGAGGGTPK--LFRPPYGETNATLRSVEAKYGLTE 121 (195)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHTTSCCCS--EECCGGGCCCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHCC-CEEEcCCCCccccccCCHHHHHHHHHHHHHHHHHHhCCCCC--EEECCCCCcCHHHHHHHHHCCCeE
Confidence 6789999999 78999999988887888999999999999999999998775 344578764 46677888888864
No 16
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=82.41 E-value=2.8 Score=43.06 Aligned_cols=74 Identities=11% Similarity=0.194 Sum_probs=61.9
Q ss_pred HHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCC-chHHHHHHHHcCCce
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGY-SATMAYLLRRMGFEN 93 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGh-s~~~p~ll~~~G~~~ 93 (961)
+.+|+++++| .||-+=+|.-++-...+.+.+.+++..+.+.|++..|..|+ |--=|+|. +..+..+++++|+..
T Consensus 75 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~--~fr~P~G~~~~~~~~~l~~~G~~~ 149 (230)
T 2y8u_A 75 GLLQRMRDEG-HQVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPALGVAPA--YMRPPYLETNELVLQVMRDLDYRV 149 (230)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSSCBS--EECCGGGCCCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHCC-CEEEecccCCCCcccCCHHHHHHHHHHHHHHHHHHhCCCCc--EEECCCCCCCHHHHHHHHHcCCEE
Confidence 7899999999 78999999988888889999999999999999999998765 44457774 456778888899864
No 17
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=82.12 E-value=2.3 Score=44.47 Aligned_cols=76 Identities=16% Similarity=0.139 Sum_probs=62.9
Q ss_pred HHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCC-chHHHHHHHHcCCce
Q 002134 15 QRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGY-SATMAYLLRRMGFEN 93 (961)
Q Consensus 15 ~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGh-s~~~p~ll~~~G~~~ 93 (961)
..+.+|+++++| .||-+=+|.-++-..-+.+.+.+++..+.+.|++..|..|+ |--=|||. +..+..+++++||..
T Consensus 87 ~p~~lr~i~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~--~fr~P~G~~~~~~~~~l~~~G~~~ 163 (254)
T 2iw0_A 87 NPDTIRRMRADG-HLVGSHTYAHPDLNTLSSADRISQMRQLEEATRRIDGFAPK--YMRAPYLSCDAGCQGDLGGLGYHI 163 (254)
T ss_dssp HHHHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSCEES--EECCGGGCCCHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHCC-CEEEeeccCCCCcccCCHHHHHHHHHHHHHHHHHHhCCCCC--EEECCCCCCCHHHHHHHHHcCCeE
Confidence 347899999999 78999999988887788999999999999999999998664 44557774 456778888899864
No 18
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis}
Probab=81.31 E-value=3.3 Score=44.29 Aligned_cols=80 Identities=16% Similarity=0.197 Sum_probs=66.9
Q ss_pred HHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCC-CchHHHHHHHHcCCceee
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFG-YSATMAYLLRRMGFENML 95 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFG-hs~~~p~ll~~~G~~~~~ 95 (961)
+.+|+++++| .||-+=||.-.+-..-+.+.+.++|..+.+.|++.+|..|+ +|-. |+| ++..+..+++++||.+..
T Consensus 92 ~~v~~~~~~G-hEIg~H~~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G~~p~-~fr~-P~g~~~~~~~~~l~e~G~~yds 168 (300)
T 3rxz_A 92 EPIRSIARAG-HEIAHHGYLHESLVGADEDTERKILTRGIEALEEVAGVHPV-GYRA-PMWEMNWHTPKLLAEFGFLYDS 168 (300)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCCTTCCHHHHHHHHHHHHHHHHHHHSCCCC-EECC-GGGCCCTTHHHHHHHTTCSEEC
T ss_pred HHHHHHHHcC-CEEEecCCCCcccccCCHHHHHHHHHHHHHHHHHHhCCCCc-EEEC-CCCCCCHHHHHHHHHcCCEEEe
Confidence 6799999999 79999999988888889999999999999999999998775 3443 333 466889999999999877
Q ss_pred eecc
Q 002134 96 IQRT 99 (961)
Q Consensus 96 ~~R~ 99 (961)
-.+.
T Consensus 169 s~~~ 172 (300)
T 3rxz_A 169 TLMD 172 (300)
T ss_dssp CCCS
T ss_pred eccC
Confidence 6664
No 19
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori}
Probab=77.64 E-value=3.7 Score=44.58 Aligned_cols=80 Identities=16% Similarity=0.241 Sum_probs=65.2
Q ss_pred HHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCC-CchHHHHHHHHcCCcee
Q 002134 16 RASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFG-YSATMAYLLRRMGFENM 94 (961)
Q Consensus 16 ~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFG-hs~~~p~ll~~~G~~~~ 94 (961)
.+.+|+++++|. ||.+=||.=.+-..-+.+.+.++|..+.+.|++.+|..|+ +|-. |+| .+..+..+++++||.+.
T Consensus 103 p~~v~~i~~~Gh-EIg~H~~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G~~p~-~fr~-P~g~~~~~~~~~l~e~G~~yd 179 (326)
T 3qbu_A 103 PEQMKMIVDAGH-EVGAHGYSHENPIAMSTKQEEDVLLKSVELIKDLTGKAPT-GYVA-PWWEFSNITNELLLKHGFKYD 179 (326)
T ss_dssp HHHHHHHHTTTC-EEEBCCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSSCCC-EECC-GGGCCSSHHHHHHHTTTCCEE
T ss_pred HHHHHHHHHcCC-EEEeCCCCCcChhhCCHHHHHHHHHHHHHHHHHHHCCCCc-EEEC-CCCCCCHHHHHHHHHcCCEEE
Confidence 367899999997 9999999888877889999999999999999999998775 3432 333 55688899999999986
Q ss_pred eeec
Q 002134 95 LIQR 98 (961)
Q Consensus 95 ~~~R 98 (961)
.-.+
T Consensus 180 ss~~ 183 (326)
T 3qbu_A 180 HSLM 183 (326)
T ss_dssp CCCC
T ss_pred eecc
Confidence 5544
No 20
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=77.03 E-value=4 Score=42.33 Aligned_cols=76 Identities=17% Similarity=0.196 Sum_probs=62.4
Q ss_pred HHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCC-chHHHHHHHHcCCcee
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGY-SATMAYLLRRMGFENM 94 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGh-s~~~p~ll~~~G~~~~ 94 (961)
+.+|+++++| .||-+=+|.-++-...+.+.+.+++..+.+.|++.+|..+. -|--=|+|. +..+..+++++||..+
T Consensus 98 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~-~~fr~P~G~~~~~~~~~l~~~G~~~v 174 (247)
T 2j13_A 98 DLLLRMKDEG-HIIGNHSWSHPDFTAVNDEKLREELTSVTEEIKKVTGQKEV-KYVRPPRGVFSERTLALTKEMGYYNV 174 (247)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHCCSCC-CEECCGGGEECHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHCC-CEEEecCCCCcChhhCCHHHHHHHHHHHHHHHHHHhCCCCC-cEEeCCCCCCCHHHHHHHHHCCCEEE
Confidence 6789999999 68999999988888889999999999999999999998622 244456664 5677888899998753
No 21
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=75.81 E-value=9.1 Score=40.17 Aligned_cols=82 Identities=11% Similarity=0.222 Sum_probs=63.2
Q ss_pred HHHHHHHHHcCCeEEEceeeeecccCC-----------------------CC----HHHHHHHHHHHHHHHHHhcCCCCc
Q 002134 16 RASFTNLVKNGQLEIVGGGWVMNDEAN-----------------------SH----YFAIIEQIMEGNMWLNDTIGFIPK 68 (961)
Q Consensus 16 ~~~vk~LV~~GrlE~vgGgwv~~Dea~-----------------------~~----~es~I~Ql~~G~~~l~~~fG~~p~ 68 (961)
.+.||+++++|-.||-+=+|..+.-.. .+ -+.+.+++....+.|++.+|..|+
T Consensus 126 ~~~lr~m~~~G~~eIgsHT~~hH~~~~~~~~G~~~p~~~~~~y~~~~~~~es~~~~~~~i~~ei~~s~~~l~~~~G~~~~ 205 (268)
T 3vus_A 126 WQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPH 205 (268)
T ss_dssp HHHHHHHHHTTSEEECBCCSSCCSBCCCC-----CBTTSSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHCCCeEEecCccccccccccccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 478999999999998888888554211 12 356788899999999999999876
Q ss_pred ccEeeCCCCC-chHHHHHHHHcCCceeeeecc
Q 002134 69 NSWAIDPFGY-SATMAYLLRRMGFENMLIQRT 99 (961)
Q Consensus 69 v~W~iDpFGh-s~~~p~ll~~~G~~~~~~~R~ 99 (961)
+-.=|||. +...-.+++++||+..+..+.
T Consensus 206 --~fr~PyG~~n~~~~~~~~~~Gy~~a~t~~~ 235 (268)
T 3vus_A 206 --VFVWPYGEANGIAIEELKKLGYDMFFTLES 235 (268)
T ss_dssp --EEECGGGCCCHHHHHHHHHTTCCEEECCCS
T ss_pred --EEEeCCCcCCHHHHHHHHHCCCcEEEEecC
Confidence 33459997 456678899999998877663
No 22
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=75.73 E-value=5.2 Score=41.26 Aligned_cols=74 Identities=15% Similarity=0.123 Sum_probs=61.7
Q ss_pred HHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCC-CcccEeeCCCCC-chHHHHHHHHcCCce
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFI-PKNSWAIDPFGY-SATMAYLLRRMGFEN 93 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~-p~v~W~iDpFGh-s~~~p~ll~~~G~~~ 93 (961)
+.+|+++++| .||-+=+|.-.+-...+.+.+.+++..+.+.|++..|.. |+ +--=|||. +..+..+++++|+..
T Consensus 86 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~~--~fr~P~G~~~~~~~~~l~~~G~~~ 161 (240)
T 1ny1_A 86 QLIKRMSDEG-HIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYKITGKQDNL--YLRPPRGVFSEYVLKETKRLGYQT 161 (240)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSCCCCC--EECCGGGEECHHHHHHHHHTTCEE
T ss_pred HHHHHHHHCc-CChhcCCccccccccCCHHHHHHHHHHHHHHHHHHhCCCCCc--EEeCCCCCCCHHHHHHHHHcCCEE
Confidence 5789999999 789999999888777889999999999999999999986 43 34457774 467788889999864
No 23
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=73.45 E-value=8.2 Score=40.14 Aligned_cols=73 Identities=14% Similarity=0.059 Sum_probs=60.3
Q ss_pred HHHHHHHcCCeEEEceeeee--cccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCC--CC-chHHHHHHHHcCCc
Q 002134 18 SFTNLVKNGQLEIVGGGWVM--NDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPF--GY-SATMAYLLRRMGFE 92 (961)
Q Consensus 18 ~vk~LV~~GrlE~vgGgwv~--~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpF--Gh-s~~~p~ll~~~G~~ 92 (961)
.+|+++++| .||-+=+|.- ++-..-+.+.+.+++....+.|++..|..|+ |--=|+ |. +..+..+++++|+.
T Consensus 72 ~~~~i~~~G-heIg~Ht~~H~~~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~--~fr~P~~~G~~~~~~~~~l~~~G~~ 148 (254)
T 2vyo_A 72 LYRRAVEEG-HNVALRVDPSMDEGYQCLSQDALENNVDREIDTIDGLSGTEIR--YAAVPICNGQVNSEMYNILTERGVL 148 (254)
T ss_dssp HHHHHHHTT-CEEEEECCGGGTTCGGGSCHHHHHHHHHHHHHHHHHHHTSCCC--EEECCCBTTEECHHHHHHHHTTTCE
T ss_pred HHHHHHhCC-CEEEecCCCCCCcCcccCCHHHHHHHHHHHHHHHHHHHCCCCe--EEeCCccCCCCCHHHHHHHHHCCCE
Confidence 899999999 7899999988 7777778999999999999999999998765 344677 64 45677888888886
Q ss_pred e
Q 002134 93 N 93 (961)
Q Consensus 93 ~ 93 (961)
.
T Consensus 149 ~ 149 (254)
T 2vyo_A 149 P 149 (254)
T ss_dssp E
T ss_pred E
Confidence 3
No 24
>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=57.82 E-value=4 Score=39.49 Aligned_cols=15 Identities=27% Similarity=0.561 Sum_probs=13.9
Q ss_pred cccEeeCCCCCchHH
Q 002134 68 KNSWAIDPFGYSATM 82 (961)
Q Consensus 68 ~v~W~iDpFGhs~~~ 82 (961)
+.||..|+||++|++
T Consensus 106 ~~G~v~D~fGv~W~i 120 (163)
T 1u69_A 106 ACGWCRDKWGISWQI 120 (163)
T ss_dssp STTEEECTTSCEEEE
T ss_pred EEEEEECCCCCEEEE
Confidence 889999999999985
No 25
>4f9d_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; family 4 carbohydrate esterase, TIM barrel, hydrolase, deace carbohydrate/sugar binding; HET: MES; 1.90A {Escherichia coli} PDB: 4f9j_A*
Probab=51.80 E-value=25 Score=41.31 Aligned_cols=82 Identities=11% Similarity=0.213 Sum_probs=63.7
Q ss_pred HHHHHHHHHcCCeEEEceeeeecccC------------CC-----------C----HHHHHHHHHHHHHHHHHhcCCCCc
Q 002134 16 RASFTNLVKNGQLEIVGGGWVMNDEA------------NS-----------H----YFAIIEQIMEGNMWLNDTIGFIPK 68 (961)
Q Consensus 16 ~~~vk~LV~~GrlE~vgGgwv~~Dea------------~~-----------~----~es~I~Ql~~G~~~l~~~fG~~p~ 68 (961)
.+.+|++.++|-+||-+=+|..|--. ++ + -+.+.+++....+.|++.+|..|+
T Consensus 130 w~qlrem~~sG~~EIGsHT~shH~~l~~~p~G~~~Pa~l~r~~~~~~~~~es~~e~~~~i~~EL~~Sk~~Le~~lG~~~~ 209 (618)
T 4f9d_A 130 WQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPH 209 (618)
T ss_dssp HHHHHHHHHHTSEEECBCCSSCCSEEECSTTCCEEEGGGSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHCCCcEEeecccccccccccccccccccchhcccccccccccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 47899999999999877788744211 00 1 267899999999999999998776
Q ss_pred ccEeeCCCCC-chHHHHHHHHcCCceeeeecc
Q 002134 69 NSWAIDPFGY-SATMAYLLRRMGFENMLIQRT 99 (961)
Q Consensus 69 v~W~iDpFGh-s~~~p~ll~~~G~~~~~~~R~ 99 (961)
+-.=|||. +...-.+++++||+..+..+.
T Consensus 210 --~FayPyG~~n~~~~~~ake~Gy~~afTt~~ 239 (618)
T 4f9d_A 210 --VFVWPYGEANGIAIEELKKLGYDMFFTLES 239 (618)
T ss_dssp --EEECGGGCCCHHHHHHHHHTTCCEEECCCS
T ss_pred --EEEcCCCCCCHHHHHHHHHcCCEEEEEecC
Confidence 33459996 667788999999998887663
No 26
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=48.20 E-value=25 Score=35.29 Aligned_cols=61 Identities=25% Similarity=0.271 Sum_probs=52.0
Q ss_pred HHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCch
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSA 80 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~ 80 (961)
+.+|+++++| .||-+=+|.-.+-..-+.+.+.+++..+.+.|++.+|..|+ |--=|+|...
T Consensus 49 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~--~fr~P~G~~~ 109 (216)
T 2c71_A 49 AIIRRMVNSG-HEIGNHSWSYSGMANMSPDQIRKSIADTNAVIQKYAGTTPK--FFRPPNLETS 109 (216)
T ss_dssp HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHHHHHHHHSCCCS--EECCGGGCCC
T ss_pred HHHHHHHHCC-CEEeeCCcCCcchhhCCHHHHHHHHHHHHHHHHHhhCCCCe--EEECCCCCCC
Confidence 4899999999 78999999988887788999999999999999999998765 3445888644
No 27
>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} SCOP: c.6.2.3 d.341.1.1 PDB: 2c1g_A
Probab=47.01 E-value=31 Score=38.79 Aligned_cols=71 Identities=13% Similarity=0.145 Sum_probs=57.0
Q ss_pred HHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHHHHHHHHcCCc
Q 002134 17 ASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFE 92 (961)
Q Consensus 17 ~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~p~ll~~~G~~ 92 (961)
+.+|+++++| .||-+=+|.-++-..-+.+.+.+++..+.+.|++..|..|+ +--=|||... +.+++.+|+.
T Consensus 279 ~~lr~m~~~G-heIgnHT~sH~~l~~ls~~~~~~EI~~s~~~L~~~~G~~~~--~fr~PyG~~n--~~v~~~~G~~ 349 (431)
T 2c1i_A 279 DLVKRIKSEG-HVVGNHSWSHPILSQLSLDEAKKQITDTEDVLTKVLGSSSK--LMRPPYGAIT--DDIRNSLDLS 349 (431)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSCCCC--EECCGGGCCC--HHHHHTSSCE
T ss_pred HHHHHHHHCC-CEEeecCCCCcccccCCHHHHHHHHHHHHHHHHHhhCCCCe--EEECCCCCCC--HHHHHHCCCe
Confidence 6799999999 78999999988877778999999999999999999997664 3345888755 3455666653
No 28
>2w3z_A Putative deacetylase; PGDA, glcnac DE-N-acetylase, hydrolase, divale metal cation dependent, carbohydrate esterase family 4; 1.45A {Streptococcus mutans UA159}
Probab=42.66 E-value=40 Score=36.04 Aligned_cols=75 Identities=13% Similarity=0.077 Sum_probs=57.5
Q ss_pred HHHHHHHHHcCCeEEEceeeeecccC-----CCCHHHHHHHHHHHHHHHHHhcC--CCCcccEeeCCCCCchH-----HH
Q 002134 16 RASFTNLVKNGQLEIVGGGWVMNDEA-----NSHYFAIIEQIMEGNMWLNDTIG--FIPKNSWAIDPFGYSAT-----MA 83 (961)
Q Consensus 16 ~~~vk~LV~~GrlE~vgGgwv~~Dea-----~~~~es~I~Ql~~G~~~l~~~fG--~~p~v~W~iDpFGhs~~-----~p 83 (961)
.+.+|+++++| .||-+=+|.-++-. ..+.+.+.+++..+.+.|++..| ..|+ |--=|+|.... +.
T Consensus 150 p~~vr~i~~~G-heIgnHt~sH~~~~~~~~~~ls~~~~~~Ei~~~~~~L~~~~G~~~~p~--~fR~PyG~~~~~~~~~~~ 226 (311)
T 2w3z_A 150 KPILQRQITEG-HALGIHSFSHVYSLLYPNRVGNTQQIVSEVTRTQNALKDQLGQNFKTG--VWRYPGGHLSWTGLEAAD 226 (311)
T ss_dssp HHHHHHHHHTT-CEEEECCSSCCHHHHSGGGBCCHHHHHHHHHHHHHHHHHHHCTTBCCC--EECCTTCGGGCBCCHHHH
T ss_pred HHHHHHHHHCC-CeeeccCCccccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCCCc--EEECCCCCcChhHHHHHH
Confidence 36799999999 68888899765432 34789999999999999999999 4443 44568887543 45
Q ss_pred HHHHHcCCce
Q 002134 84 YLLRRMGFEN 93 (961)
Q Consensus 84 ~ll~~~G~~~ 93 (961)
.+++++|+..
T Consensus 227 ~~l~~~G~~~ 236 (311)
T 2w3z_A 227 KQLAAQGIQW 236 (311)
T ss_dssp HHHHTTTCEE
T ss_pred HHHHHCCCEE
Confidence 6888899864
No 29
>4hd5_A Polysaccharide deacetylase; TIM barrel, hydrolase; 1.90A {Bacillus cereus}
Probab=36.66 E-value=76 Score=34.53 Aligned_cols=80 Identities=10% Similarity=0.042 Sum_probs=56.8
Q ss_pred HHHHHHHHHHcCCeEEEceeeeecccCCCCHHHHHHHHHHHHHHHHHhcCCCCcccEeeCCCCCchHHHHHHHHcCCcee
Q 002134 15 QRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENM 94 (961)
Q Consensus 15 ~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~I~Ql~~G~~~l~~~fG~~p~v~W~iDpFGhs~~~p~ll~~~G~~~~ 94 (961)
..+.||+|.++|-+||-+=+|.-++-.-.+ .+-+++....++|.+.+|..|+ +-.=|||.-.....-+.+.||+..
T Consensus 246 sw~qIrem~~~G~~eIGsHT~sH~~L~~ls--~~e~EI~~Sk~~Le~~lG~~v~--~FAYPyG~yn~~v~~~ak~gy~~A 321 (360)
T 4hd5_A 246 STSEIKEMVDSGIFSVQSHTATHADLPKIT--NYEEELKGSKEKLEKITGKPVI--AIAYXFGHVDDKVVTETKKYYQFA 321 (360)
T ss_dssp CHHHHHHHHHTTSEEEEECCSSCCCGGGCS--CHHHHHHHHHHHHHHHHSSCCC--EEECGGGCCCHHHHHHHTTTCSEE
T ss_pred CHHHHHHHHHcCCceeeccCCcccccccCC--HHHHHHHHHHHHHHHHhCCCCc--EEEcCCCCCCHHHHHHHHhCCcEE
Confidence 356799999999999877788766643332 2337899999999999998765 345599965443333344588877
Q ss_pred eeec
Q 002134 95 LIQR 98 (961)
Q Consensus 95 ~~~R 98 (961)
+..+
T Consensus 322 fTt~ 325 (360)
T 4hd5_A 322 TTTK 325 (360)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7655
No 30
>1ldd_A APC2WHB, anaphase promoting complex; ubiquitin, ligase, ubiquitination, ring finger, winged-helix; 2.00A {Saccharomyces cerevisiae} SCOP: a.4.5.34
Probab=31.56 E-value=27 Score=28.73 Aligned_cols=23 Identities=17% Similarity=0.508 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHcCCeEEE-ceee
Q 002134 13 ESQRASFTNLVKNGQLEIV-GGGW 35 (961)
Q Consensus 13 p~~~~~vk~LV~~GrlE~v-gGgw 35 (961)
++.++-+.++|++|+||.+ ||-|
T Consensus 48 ~eL~~fL~~~v~e~kL~~~~gG~Y 71 (74)
T 1ldd_A 48 QQLEGYLNTLADEGRLKYIANGSY 71 (74)
T ss_dssp HHHHHHHHHHHHTTSEECCTTTEE
T ss_pred HHHHHHHHHHHhCCeEEEeCCCEE
Confidence 6677888999999999975 7766
No 31
>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7
Probab=20.74 E-value=22 Score=33.03 Aligned_cols=15 Identities=33% Similarity=0.687 Sum_probs=13.9
Q ss_pred cccEeeCCCCCchHH
Q 002134 68 KNSWAIDPFGYSATM 82 (961)
Q Consensus 68 ~v~W~iDpFGhs~~~ 82 (961)
+.||..||||+++++
T Consensus 111 ~~g~v~Dp~G~~W~i 125 (139)
T 1tsj_A 111 EFAWVQDKFGVSFQL 125 (139)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred eEEEEECCCCCEEEE
Confidence 799999999999975
Done!