Query 002143
Match_columns 960
No_of_seqs 302 out of 1421
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 14:10:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002143.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002143hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ef1_A RNA polymerase II subun 100.0 2.6E-63 9E-68 555.3 29.3 318 627-958 5-441 (442)
2 3ef0_A RNA polymerase II subun 100.0 3.5E-61 1.2E-65 529.0 29.6 308 637-958 9-371 (372)
3 3qle_A TIM50P; chaperone, mito 100.0 1.6E-34 5.3E-39 295.2 12.2 184 611-867 6-190 (204)
4 2ght_A Carboxy-terminal domain 100.0 8.9E-32 3E-36 267.2 11.2 167 642-863 11-180 (181)
5 3shq_A UBLCP1; phosphatase, hy 100.0 6.5E-31 2.2E-35 284.2 8.5 164 643-864 137-309 (320)
6 2hhl_A CTD small phosphatase-l 100.0 2.8E-28 9.5E-33 245.8 12.4 157 643-845 25-184 (195)
7 3l3e_A DNA topoisomerase 2-bin 99.8 1.1E-18 3.8E-23 159.8 9.4 90 865-959 11-103 (107)
8 3l46_A Protein ECT2; alternati 99.7 2.4E-19 8.3E-24 168.3 2.2 96 858-958 10-105 (112)
9 2cou_A ECT2 protein; BRCT doma 99.7 2.9E-19 9.8E-24 165.5 0.6 92 863-959 6-97 (109)
10 2d8m_A DNA-repair protein XRCC 99.7 8.8E-18 3E-22 159.4 7.9 89 866-959 19-107 (129)
11 3pa6_A Microcephalin; BRCT dom 99.7 7.2E-17 2.5E-21 150.2 9.0 94 865-959 3-96 (107)
12 4id3_A DNA repair protein REV1 99.7 8.6E-17 2.9E-21 141.5 8.0 87 866-959 4-92 (92)
13 2ebw_A DNA repair protein REV1 99.6 8.5E-16 2.9E-20 137.6 6.9 86 867-959 10-96 (97)
14 3olc_X DNA topoisomerase 2-bin 99.6 2.2E-15 7.4E-20 161.3 7.7 93 862-959 192-285 (298)
15 1wf6_A Similar to S.pombe -RAD 99.5 1.2E-14 4E-19 138.4 7.1 94 860-959 31-127 (132)
16 1l0b_A BRCA1; TANDEM-BRCT, thr 99.5 1.5E-14 5.1E-19 146.4 7.4 89 866-959 1-95 (229)
17 3pc6_A DNA repair protein XRCC 99.5 7.8E-14 2.7E-18 129.6 9.7 89 868-960 6-96 (104)
18 2nte_A BARD-1, BRCA1-associate 99.4 9.4E-14 3.2E-18 139.7 8.1 84 871-959 1-87 (210)
19 1t15_A Breast cancer type 1 su 99.4 1E-13 3.6E-18 138.1 7.7 84 871-959 3-92 (214)
20 2etx_A Mediator of DNA damage 99.4 3.3E-13 1.1E-17 136.7 9.1 86 865-959 5-91 (209)
21 3sqd_A PAX-interacting protein 99.4 3E-13 1E-17 139.0 7.0 89 865-959 9-98 (219)
22 3al2_A DNA topoisomerase 2-bin 99.3 1.4E-12 4.9E-17 135.3 8.3 87 868-959 5-94 (235)
23 3olc_X DNA topoisomerase 2-bin 99.3 5.1E-12 1.8E-16 135.3 8.3 83 868-955 104-186 (298)
24 3u3z_A Microcephalin; DNA repa 99.3 6.2E-12 2.1E-16 127.2 7.7 84 871-959 10-95 (199)
25 3l41_A BRCT-containing protein 99.2 8.6E-12 2.9E-16 128.7 5.6 82 869-959 5-87 (220)
26 2jw5_A DNA polymerase lambda; 99.1 6.8E-11 2.3E-15 109.6 8.2 93 864-959 6-104 (106)
27 3ii6_X DNA ligase 4; XRCC4, NH 99.1 1E-10 3.5E-15 122.9 10.0 93 866-958 161-263 (263)
28 1kzy_C Tumor suppressor P53-bi 99.1 1.5E-10 5E-15 121.7 8.6 93 867-959 13-136 (259)
29 2vxb_A DNA repair protein RHP9 99.0 3.2E-10 1.1E-14 118.0 9.0 86 869-958 2-116 (241)
30 3ii6_X DNA ligase 4; XRCC4, NH 99.0 5E-10 1.7E-14 117.8 7.9 91 862-958 3-95 (263)
31 1l7b_A DNA ligase; BRCT, autos 99.0 3.8E-10 1.3E-14 102.7 5.6 76 867-947 5-80 (92)
32 2k6g_A Replication factor C su 98.9 3.9E-09 1.3E-13 98.8 9.5 79 866-948 29-108 (109)
33 1z56_C DNA ligase IV; DNA repa 98.9 5.3E-10 1.8E-14 116.1 2.7 90 865-958 156-261 (264)
34 2ebu_A Replication factor C su 98.8 7E-09 2.4E-13 97.7 8.5 77 867-947 20-97 (112)
35 2ep8_A Pescadillo homolog 1; A 98.8 5.3E-09 1.8E-13 96.4 6.1 80 867-957 10-100 (100)
36 2cok_A Poly [ADP-ribose] polym 98.7 1.6E-08 5.4E-13 95.4 7.0 80 868-952 9-101 (113)
37 2coe_A Deoxynucleotidyltransfe 98.7 4E-08 1.4E-12 93.7 8.4 87 868-958 19-113 (120)
38 1z56_C DNA ligase IV; DNA repa 98.6 6.4E-09 2.2E-13 108.1 0.5 91 867-958 3-100 (264)
39 1l0b_A BRCA1; TANDEM-BRCT, thr 98.6 6E-08 2E-12 98.1 6.4 91 865-959 113-213 (229)
40 3pc7_A DNA ligase 3; DNA repai 98.5 6.7E-08 2.3E-12 87.8 5.5 73 868-954 15-88 (88)
41 1t15_A Breast cancer type 1 su 98.5 6.3E-08 2.2E-12 96.4 4.2 90 866-959 112-211 (214)
42 3u3z_A Microcephalin; DNA repa 98.4 1.4E-07 4.8E-12 95.5 4.1 82 866-959 116-198 (199)
43 2etx_A Mediator of DNA damage 98.2 2.6E-06 8.9E-11 86.3 7.7 88 867-960 113-203 (209)
44 2dun_A POL MU, DNA polymerase 98.1 3.3E-06 1.1E-10 81.9 6.2 87 869-958 10-106 (133)
45 1kzy_C Tumor suppressor P53-bi 98.1 3.1E-06 1.1E-10 88.9 6.1 86 866-956 152-249 (259)
46 2nte_A BARD-1, BRCA1-associate 98.0 3.1E-06 1.1E-10 85.1 3.4 84 866-954 101-209 (210)
47 1dgs_A DNA ligase; AMP complex 97.9 2.2E-06 7.6E-11 101.1 1.8 76 867-947 585-660 (667)
48 2owo_A DNA ligase; protein-DNA 97.9 3.6E-06 1.2E-10 99.4 2.1 76 867-946 595-670 (671)
49 2wm8_A MDP-1, magnesium-depend 97.5 9.4E-05 3.2E-09 71.6 5.9 80 698-787 66-148 (187)
50 3m9l_A Hydrolase, haloacid deh 97.5 0.00013 4.5E-09 70.0 6.3 86 697-787 67-155 (205)
51 3sqd_A PAX-interacting protein 97.4 0.00028 9.7E-09 72.5 8.3 88 866-959 119-219 (219)
52 3ib6_A Uncharacterized protein 97.4 0.00022 7.4E-09 69.4 6.3 83 699-785 33-123 (189)
53 2fpr_A Histidine biosynthesis 97.4 0.0007 2.4E-08 65.7 9.8 113 642-786 10-143 (176)
54 2pr7_A Haloacid dehalogenase/e 97.2 5E-05 1.7E-09 68.0 0.4 83 701-788 19-103 (137)
55 2vxb_A DNA repair protein RHP9 97.2 0.00024 8.1E-09 74.1 5.4 81 865-952 147-240 (241)
56 3m1y_A Phosphoserine phosphata 97.2 0.00029 1E-08 67.5 4.8 88 699-787 74-169 (217)
57 3kzx_A HAD-superfamily hydrola 97.1 0.00067 2.3E-08 65.8 6.8 85 698-787 101-188 (231)
58 3t7k_A RTT107, regulator of TY 97.1 0.00085 2.9E-08 71.2 8.1 100 856-959 6-119 (256)
59 2pib_A Phosphorylated carbohyd 97.1 0.00037 1.3E-08 65.6 4.2 84 699-787 83-168 (216)
60 3l8h_A Putative haloacid dehal 97.0 0.00075 2.6E-08 64.1 6.0 106 647-786 2-128 (179)
61 2gmw_A D,D-heptose 1,7-bisphos 97.0 0.00085 2.9E-08 66.6 6.2 68 643-739 22-105 (211)
62 3kbb_A Phosphorylated carbohyd 96.9 0.00037 1.3E-08 67.3 3.3 84 699-787 83-168 (216)
63 2p9j_A Hypothetical protein AQ 96.9 0.0011 3.6E-08 62.4 6.2 101 646-787 9-111 (162)
64 1rku_A Homoserine kinase; phos 96.8 0.00068 2.3E-08 65.2 3.9 87 699-788 68-157 (206)
65 3al2_A DNA topoisomerase 2-bin 96.8 0.00086 3E-08 69.7 4.8 86 867-958 133-228 (235)
66 3um9_A Haloacid dehalogenase, 96.8 0.00061 2.1E-08 65.5 3.0 83 699-786 95-179 (230)
67 3huf_A DNA repair and telomere 96.6 0.0017 5.9E-08 70.9 5.8 56 891-947 127-187 (325)
68 4eze_A Haloacid dehalogenase-l 96.4 0.0015 5E-08 70.0 3.1 88 699-787 178-273 (317)
69 3nuq_A Protein SSM1, putative 96.3 0.00092 3.1E-08 67.7 1.2 86 699-787 141-233 (282)
70 3dv9_A Beta-phosphoglucomutase 96.3 0.0027 9.1E-08 61.7 4.2 84 699-787 107-193 (247)
71 3zvl_A Bifunctional polynucleo 96.2 0.0086 2.9E-07 66.4 8.6 111 644-786 56-184 (416)
72 1qq5_A Protein (L-2-haloacid d 96.1 0.0029 1E-07 63.0 3.5 82 699-786 92-174 (253)
73 3skx_A Copper-exporting P-type 96.1 0.027 9.2E-07 56.2 10.3 44 700-744 144-188 (280)
74 4gns_A Chitin biosynthesis pro 96.1 0.0067 2.3E-07 61.6 5.9 96 861-958 153-253 (290)
75 4dcc_A Putative haloacid dehal 96.0 0.0012 4E-08 64.7 0.3 84 700-787 112-201 (229)
76 1nnl_A L-3-phosphoserine phosp 96.0 0.0079 2.7E-07 58.5 6.1 49 699-747 85-135 (225)
77 2i7d_A 5'(3')-deoxyribonucleot 95.8 0.0028 9.7E-08 61.4 1.9 39 699-737 72-112 (193)
78 2o2x_A Hypothetical protein; s 95.8 0.0093 3.2E-07 59.0 5.5 64 645-737 30-109 (218)
79 3iru_A Phoshonoacetaldehyde hy 95.7 0.0081 2.8E-07 59.4 4.9 84 699-786 110-196 (277)
80 3nvb_A Uncharacterized protein 95.7 0.0087 3E-07 66.9 5.4 119 639-789 215-341 (387)
81 2oda_A Hypothetical protein ps 95.7 0.0052 1.8E-07 61.0 3.1 79 699-787 35-116 (196)
82 1k1e_A Deoxy-D-mannose-octulos 95.4 0.027 9.1E-07 54.4 6.9 100 647-787 9-110 (180)
83 3p96_A Phosphoserine phosphata 95.1 0.0029 9.9E-08 69.2 -0.7 88 699-787 255-350 (415)
84 3e8m_A Acylneuraminate cytidyl 95.0 0.025 8.5E-07 53.1 5.5 66 708-787 39-106 (164)
85 2l42_A DNA-binding protein RAP 94.8 0.018 6E-07 53.8 3.7 85 868-960 10-96 (106)
86 2b0c_A Putative phosphatase; a 94.8 0.001 3.4E-08 63.3 -4.7 86 698-788 89-177 (206)
87 2i33_A Acid phosphatase; HAD s 94.6 0.043 1.5E-06 57.4 6.5 78 642-739 55-144 (258)
88 2r8e_A 3-deoxy-D-manno-octulos 94.4 0.062 2.1E-06 52.3 6.8 67 707-787 60-128 (188)
89 3mn1_A Probable YRBI family ph 94.2 0.048 1.6E-06 53.4 5.3 101 646-787 19-121 (189)
90 3ocu_A Lipoprotein E; hydrolas 94.0 0.051 1.7E-06 57.8 5.5 88 643-751 55-156 (262)
91 1q92_A 5(3)-deoxyribonucleotid 93.9 0.021 7.1E-07 55.6 2.2 39 699-737 74-114 (197)
92 3mmz_A Putative HAD family hyd 93.9 0.067 2.3E-06 51.8 5.7 65 708-787 47-113 (176)
93 3pct_A Class C acid phosphatas 93.6 0.074 2.5E-06 56.6 5.9 75 644-738 56-144 (260)
94 3qbz_A DDK kinase regulatory s 92.5 0.2 6.8E-06 50.2 6.6 75 867-942 56-147 (160)
95 3bwv_A Putative 5'(3')-deoxyri 92.3 0.17 5.9E-06 48.2 5.9 26 699-724 68-93 (180)
96 3ij5_A 3-deoxy-D-manno-octulos 92.3 0.13 4.4E-06 52.0 5.2 102 647-789 50-153 (211)
97 3e58_A Putative beta-phosphogl 92.3 0.15 5.1E-06 47.7 5.3 84 699-787 88-173 (214)
98 3n07_A 3-deoxy-D-manno-octulos 92.1 0.057 2E-06 53.9 2.4 66 708-787 60-127 (195)
99 2b82_A APHA, class B acid phos 92.0 0.028 9.7E-07 56.4 -0.1 37 701-737 89-126 (211)
100 3l41_A BRCT-containing protein 91.9 0.16 5.3E-06 52.5 5.4 87 866-955 110-211 (220)
101 2nyv_A Pgpase, PGP, phosphogly 91.8 0.19 6.6E-06 49.1 5.7 84 699-787 82-167 (222)
102 2obb_A Hypothetical protein; s 91.6 0.32 1.1E-05 47.3 6.9 63 646-741 3-66 (142)
103 2hsz_A Novel predicted phospha 91.5 0.2 7E-06 49.7 5.5 84 699-787 113-198 (243)
104 3n1u_A Hydrolase, HAD superfam 91.5 0.076 2.6E-06 52.2 2.4 66 708-787 54-121 (191)
105 3s6j_A Hydrolase, haloacid deh 91.4 0.19 6.4E-06 48.1 5.0 84 699-787 90-175 (233)
106 3umb_A Dehalogenase-like hydro 91.1 0.19 6.6E-06 48.3 4.7 84 699-787 98-183 (233)
107 2hdo_A Phosphoglycolate phosph 91.0 0.16 5.3E-06 48.5 3.9 84 699-787 82-166 (209)
108 3qnm_A Haloacid dehalogenase-l 90.8 0.23 7.7E-06 47.6 4.9 83 699-786 106-189 (240)
109 3ed5_A YFNB; APC60080, bacillu 90.6 0.25 8.6E-06 47.4 5.1 83 699-786 102-186 (238)
110 4ex6_A ALNB; modified rossman 90.5 0.26 8.8E-06 47.6 5.0 84 699-787 103-188 (237)
111 3oq0_A DBF4, protein DNA52; DD 90.1 0.44 1.5E-05 47.3 6.3 81 866-947 17-114 (151)
112 2hoq_A Putative HAD-hydrolase 90.0 0.2 6.7E-06 49.2 3.7 83 699-786 93-177 (241)
113 3kc2_A Uncharacterized protein 89.8 0.44 1.5E-05 52.2 6.7 56 644-737 11-71 (352)
114 4eek_A Beta-phosphoglucomutase 89.7 0.16 5.4E-06 50.2 2.9 86 699-787 109-196 (259)
115 2gfh_A Haloacid dehalogenase-l 89.6 0.17 5.9E-06 51.3 3.2 82 699-785 120-202 (260)
116 2hi0_A Putative phosphoglycola 89.3 0.41 1.4E-05 47.2 5.5 83 699-787 109-193 (240)
117 1xpj_A Hypothetical protein; s 89.1 0.49 1.7E-05 43.9 5.6 62 648-740 3-77 (126)
118 2ah5_A COG0546: predicted phos 89.1 0.19 6.7E-06 48.6 3.0 82 699-787 83-165 (210)
119 3mc1_A Predicted phosphatase, 88.8 0.2 6.9E-06 47.9 2.8 84 699-787 85-170 (226)
120 1wr8_A Phosphoglycolate phosph 88.6 0.63 2.2E-05 46.3 6.3 57 647-740 4-61 (231)
121 1l6r_A Hypothetical protein TA 88.5 0.44 1.5E-05 48.0 5.2 57 647-740 6-63 (227)
122 3kd3_A Phosphoserine phosphohy 88.1 0.86 3E-05 42.8 6.6 87 700-787 82-175 (219)
123 1zrn_A L-2-haloacid dehalogena 88.1 0.39 1.3E-05 46.4 4.3 83 699-786 94-178 (232)
124 1te2_A Putative phosphatase; s 87.9 0.56 1.9E-05 44.3 5.2 84 699-787 93-178 (226)
125 2no4_A (S)-2-haloacid dehaloge 87.8 0.4 1.4E-05 46.8 4.3 83 699-786 104-188 (240)
126 2hcf_A Hydrolase, haloacid deh 87.7 0.36 1.2E-05 46.3 3.8 85 699-787 92-181 (234)
127 3pgv_A Haloacid dehalogenase-l 87.0 0.86 2.9E-05 46.6 6.3 60 644-740 19-79 (285)
128 2go7_A Hydrolase, haloacid deh 86.9 0.73 2.5E-05 42.6 5.3 83 699-787 84-168 (207)
129 3ddh_A Putative haloacid dehal 86.8 0.5 1.7E-05 44.7 4.2 79 698-786 103-184 (234)
130 3u26_A PF00702 domain protein; 86.7 0.32 1.1E-05 46.7 2.7 83 699-786 99-182 (234)
131 1xvi_A MPGP, YEDP, putative ma 86.5 1.2 4.1E-05 45.8 7.1 59 645-740 8-67 (275)
132 3oq4_A DBF4, protein DNA52; DD 86.3 1.2 4E-05 43.6 6.4 54 893-946 35-96 (134)
133 3sd7_A Putative phosphatase; s 85.8 0.49 1.7E-05 46.0 3.6 84 699-787 109-195 (240)
134 3qgm_A P-nitrophenyl phosphata 85.5 0.64 2.2E-05 46.6 4.4 16 646-661 8-23 (268)
135 1yns_A E-1 enzyme; hydrolase f 85.0 0.55 1.9E-05 48.1 3.7 83 699-787 129-215 (261)
136 4dw8_A Haloacid dehalogenase-l 84.9 1.1 3.6E-05 45.3 5.7 56 646-738 5-61 (279)
137 3dnp_A Stress response protein 84.9 1.2 4E-05 45.2 6.1 57 646-739 6-63 (290)
138 2zg6_A Putative uncharacterize 84.9 0.78 2.7E-05 44.6 4.6 82 698-787 93-175 (220)
139 3mpo_A Predicted hydrolase of 84.7 0.99 3.4E-05 45.5 5.4 57 646-739 5-62 (279)
140 2w43_A Hypothetical 2-haloalka 84.6 0.35 1.2E-05 46.0 1.9 82 699-787 73-154 (201)
141 3umg_A Haloacid dehalogenase; 84.5 0.37 1.2E-05 46.6 2.0 82 699-787 115-197 (254)
142 1nrw_A Hypothetical protein, h 84.4 1.3 4.5E-05 45.4 6.2 57 647-740 5-62 (288)
143 2pq0_A Hypothetical conserved 83.7 1.1 3.8E-05 44.8 5.2 56 647-739 4-60 (258)
144 3umc_A Haloacid dehalogenase; 83.6 0.61 2.1E-05 45.4 3.2 82 699-787 119-201 (254)
145 3smv_A S-(-)-azetidine-2-carbo 83.5 0.63 2.1E-05 44.4 3.2 81 699-786 98-182 (240)
146 2i6x_A Hydrolase, haloacid deh 83.4 0.31 1.1E-05 46.4 1.0 86 698-788 87-179 (211)
147 1vjr_A 4-nitrophenylphosphatas 83.3 1.7 5.9E-05 43.4 6.4 17 645-661 16-32 (271)
148 3qxg_A Inorganic pyrophosphata 83.0 0.79 2.7E-05 44.8 3.7 84 699-787 108-194 (243)
149 3epr_A Hydrolase, haloacid deh 82.8 0.71 2.4E-05 46.6 3.4 16 646-661 5-20 (264)
150 3d6j_A Putative haloacid dehal 82.7 1.4 4.9E-05 41.4 5.3 84 699-787 88-173 (225)
151 1nf2_A Phosphatase; structural 82.6 1.8 6.2E-05 44.0 6.3 57 647-740 3-59 (268)
152 1zjj_A Hypothetical protein PH 82.3 1.2 4E-05 45.1 4.8 15 647-661 2-16 (263)
153 3dao_A Putative phosphatse; st 82.3 1.3 4.4E-05 45.4 5.1 60 643-738 18-78 (283)
154 2pke_A Haloacid delahogenase-l 82.1 0.95 3.3E-05 44.5 3.9 78 699-786 111-189 (251)
155 1s2o_A SPP, sucrose-phosphatas 82.0 1 3.6E-05 45.4 4.3 33 706-738 25-57 (244)
156 3nas_A Beta-PGM, beta-phosphog 81.8 1.1 3.7E-05 43.1 4.2 79 701-786 93-173 (233)
157 2om6_A Probable phosphoserine 81.8 0.91 3.1E-05 43.2 3.5 81 701-786 100-185 (235)
158 2zos_A MPGP, mannosyl-3-phosph 81.7 2.3 8E-05 42.9 6.7 35 705-739 22-57 (249)
159 2ho4_A Haloacid dehalogenase-l 81.7 1.5 5.3E-05 43.0 5.2 16 646-661 7-22 (259)
160 2fea_A 2-hydroxy-3-keto-5-meth 81.4 1.2 4E-05 44.1 4.3 38 699-736 76-114 (236)
161 2fue_A PMM 1, PMMH-22, phospho 81.3 1.7 5.9E-05 44.2 5.6 17 645-661 12-28 (262)
162 3pdw_A Uncharacterized hydrola 81.0 0.67 2.3E-05 46.5 2.4 15 646-660 6-20 (266)
163 1rkq_A Hypothetical protein YI 80.8 1.5 5.3E-05 45.0 5.1 56 647-739 6-62 (282)
164 2hx1_A Predicted sugar phospha 80.7 2.4 8.3E-05 43.1 6.5 40 646-723 14-54 (284)
165 3cnh_A Hydrolase family protei 80.4 0.65 2.2E-05 43.9 2.0 85 699-788 85-170 (200)
166 2amy_A PMM 2, phosphomannomuta 80.3 2.2 7.7E-05 42.7 6.0 18 644-661 4-21 (246)
167 2fi1_A Hydrolase, haloacid deh 79.7 2.3 7.8E-05 39.5 5.5 80 701-787 83-163 (190)
168 1qyi_A ZR25, hypothetical prot 79.2 0.7 2.4E-05 51.3 2.1 52 699-751 214-267 (384)
169 3fvv_A Uncharacterized protein 78.5 2.3 7.8E-05 41.2 5.2 48 700-748 92-140 (232)
170 2c4n_A Protein NAGD; nucleotid 76.7 2.6 8.7E-05 40.4 4.9 16 647-662 4-19 (250)
171 3fzq_A Putative hydrolase; YP_ 76.5 1.4 4.8E-05 43.9 3.2 16 646-661 5-20 (274)
172 2oyc_A PLP phosphatase, pyrido 76.5 2.5 8.6E-05 43.7 5.1 40 646-723 21-61 (306)
173 3a1c_A Probable copper-exporti 76.2 4.6 0.00016 41.6 7.0 73 699-787 162-235 (287)
174 2b30_A Pvivax hypothetical pro 75.6 2.8 9.6E-05 43.9 5.3 55 646-737 27-85 (301)
175 3k1z_A Haloacid dehalogenase-l 75.3 1.4 4.9E-05 44.1 2.8 82 699-786 105-188 (263)
176 2qlt_A (DL)-glycerol-3-phospha 74.5 3.7 0.00013 41.5 5.7 83 699-787 113-205 (275)
177 1yv9_A Hydrolase, haloacid deh 73.8 2.5 8.7E-05 42.1 4.2 16 646-661 5-20 (264)
178 1l7m_A Phosphoserine phosphata 73.7 1.4 4.8E-05 41.3 2.2 46 699-745 75-121 (211)
179 3ewi_A N-acylneuraminate cytid 73.0 2.5 8.5E-05 41.4 3.8 99 645-787 8-110 (168)
180 3f9r_A Phosphomannomutase; try 72.3 4.1 0.00014 41.6 5.5 16 646-661 4-19 (246)
181 1rlm_A Phosphatase; HAD family 72.0 2.2 7.7E-05 43.3 3.4 15 647-661 4-18 (271)
182 3l7y_A Putative uncharacterize 70.7 2.2 7.5E-05 44.1 3.0 16 646-661 37-52 (304)
183 2x4d_A HLHPP, phospholysine ph 70.5 4.7 0.00016 39.4 5.2 15 647-661 13-27 (271)
184 3r4c_A Hydrolase, haloacid deh 70.0 2.8 9.6E-05 41.9 3.5 15 646-660 12-26 (268)
185 2rbk_A Putative uncharacterize 69.6 1.5 5.3E-05 44.0 1.6 15 647-661 3-17 (261)
186 4ap9_A Phosphoserine phosphata 68.5 1.7 6E-05 40.3 1.6 81 699-787 78-161 (201)
187 3n28_A Phosphoserine phosphata 68.5 2.1 7.3E-05 45.0 2.4 47 699-746 177-224 (335)
188 2wf7_A Beta-PGM, beta-phosphog 66.8 3.8 0.00013 38.6 3.5 82 699-787 90-173 (221)
189 2fdr_A Conserved hypothetical 66.1 2.5 8.5E-05 40.3 2.1 84 699-787 86-171 (229)
190 4g9b_A Beta-PGM, beta-phosphog 65.8 3.1 0.00011 41.5 2.8 81 700-787 95-177 (243)
191 1swv_A Phosphonoacetaldehyde h 65.3 4.2 0.00015 40.1 3.7 85 699-787 102-189 (267)
192 1l7m_A Phosphoserine phosphata 64.9 5.2 0.00018 37.4 4.0 17 645-661 4-20 (211)
193 4gib_A Beta-phosphoglucomutase 63.9 2.8 9.4E-05 41.9 2.1 82 699-787 115-198 (250)
194 1u02_A Trehalose-6-phosphate p 63.8 3.7 0.00013 41.4 3.0 35 702-736 25-59 (239)
195 3l5k_A Protein GS1, haloacid d 63.3 2.3 7.8E-05 41.7 1.3 84 699-787 111-201 (250)
196 3d6j_A Putative haloacid dehal 62.4 2.8 9.5E-05 39.5 1.7 16 646-661 6-21 (225)
197 2hcf_A Hydrolase, haloacid deh 60.3 3 0.0001 39.8 1.6 16 646-661 4-19 (234)
198 2go7_A Hydrolase, haloacid deh 60.3 3 0.0001 38.4 1.4 15 647-661 5-19 (207)
199 3i28_A Epoxide hydrolase 2; ar 60.2 3.2 0.00011 44.4 1.9 82 699-787 99-188 (555)
200 3gyg_A NTD biosynthesis operon 59.6 3.5 0.00012 42.0 2.0 62 645-738 21-84 (289)
201 3e58_A Putative beta-phosphogl 59.5 3.1 0.00011 38.6 1.4 16 646-661 5-20 (214)
202 2fi1_A Hydrolase, haloacid deh 59.3 2.7 9.1E-05 39.0 0.9 49 887-945 137-185 (190)
203 2p11_A Hypothetical protein; p 58.6 3.4 0.00012 40.5 1.6 77 699-787 95-172 (231)
204 2yj3_A Copper-transporting ATP 62.7 2.1 7.2E-05 44.0 0.0 74 698-787 134-209 (263)
205 1ltq_A Polynucleotide kinase; 57.7 3.2 0.00011 42.8 1.2 95 699-798 187-292 (301)
206 2hdo_A Phosphoglycolate phosph 57.1 3.6 0.00012 39.0 1.4 15 647-661 5-19 (209)
207 2ah5_A COG0546: predicted phos 57.1 3.9 0.00013 39.4 1.7 16 646-661 4-19 (210)
208 2w43_A Hypothetical 2-haloalka 57.0 3.7 0.00013 38.9 1.5 14 648-661 3-16 (201)
209 1te2_A Putative phosphatase; s 56.9 3.4 0.00012 38.9 1.2 16 646-661 9-24 (226)
210 3kd3_A Phosphoserine phosphohy 56.6 4.1 0.00014 38.1 1.7 16 646-661 4-19 (219)
211 2wf7_A Beta-PGM, beta-phosphog 56.6 3 0.0001 39.3 0.8 15 647-661 3-17 (221)
212 3mc1_A Predicted phosphatase, 56.4 3.5 0.00012 39.3 1.2 16 646-661 4-19 (226)
213 3ddh_A Putative haloacid dehal 56.3 3.5 0.00012 38.9 1.2 16 646-661 8-23 (234)
214 2fdr_A Conserved hypothetical 56.2 3.5 0.00012 39.2 1.2 15 647-661 5-19 (229)
215 2p11_A Hypothetical protein; p 56.0 7.4 0.00025 38.0 3.5 17 645-661 10-26 (231)
216 2i6x_A Hydrolase, haloacid deh 55.9 3.8 0.00013 38.8 1.4 16 646-661 5-20 (211)
217 2pke_A Haloacid delahogenase-l 55.4 3.6 0.00012 40.4 1.2 16 646-661 13-28 (251)
218 1zrn_A L-2-haloacid dehalogena 55.3 4 0.00014 39.2 1.5 15 647-661 5-19 (232)
219 3fvv_A Uncharacterized protein 55.2 4.2 0.00014 39.3 1.6 16 646-661 4-19 (232)
220 3vay_A HAD-superfamily hydrola 55.1 2.7 9.1E-05 40.2 0.2 78 699-786 104-182 (230)
221 3nas_A Beta-PGM, beta-phosphog 55.0 3.6 0.00012 39.5 1.0 15 647-661 3-17 (233)
222 2om6_A Probable phosphoserine 54.9 3.6 0.00012 39.1 1.0 15 647-661 5-19 (235)
223 4ex6_A ALNB; modified rossman 54.7 4.7 0.00016 38.8 1.8 18 644-661 17-34 (237)
224 3s6j_A Hydrolase, haloacid deh 54.4 4.6 0.00016 38.4 1.7 16 646-661 6-21 (233)
225 3cnh_A Hydrolase family protei 54.3 4.3 0.00015 38.2 1.5 16 646-661 4-19 (200)
226 3ed5_A YFNB; APC60080, bacillu 54.1 4.1 0.00014 38.9 1.3 16 646-661 7-22 (238)
227 3zx4_A MPGP, mannosyl-3-phosph 52.9 4.3 0.00015 40.8 1.3 15 647-661 1-15 (259)
228 2hi0_A Putative phosphoglycola 52.8 4.5 0.00016 39.7 1.4 15 647-661 5-19 (240)
229 3smv_A S-(-)-azetidine-2-carbo 52.8 4 0.00014 38.8 1.0 16 646-661 6-21 (240)
230 3vay_A HAD-superfamily hydrola 52.2 4.4 0.00015 38.6 1.2 15 647-661 3-17 (230)
231 3umc_A Haloacid dehalogenase; 52.0 4.9 0.00017 39.0 1.5 17 645-661 21-37 (254)
232 2hsz_A Novel predicted phospha 51.6 5.4 0.00018 39.4 1.7 16 646-661 23-38 (243)
233 1swv_A Phosphonoacetaldehyde h 51.5 4.5 0.00015 39.9 1.2 16 646-661 6-21 (267)
234 4eek_A Beta-phosphoglucomutase 51.5 6.1 0.00021 38.8 2.1 17 645-661 27-43 (259)
235 3umb_A Dehalogenase-like hydro 51.1 5.9 0.0002 37.8 1.9 16 646-661 4-19 (233)
236 2hoq_A Putative HAD-hydrolase 51.1 4.5 0.00015 39.5 1.0 15 647-661 3-17 (241)
237 3u26_A PF00702 domain protein; 51.1 4.6 0.00016 38.5 1.1 15 647-661 3-17 (234)
238 4gib_A Beta-phosphoglucomutase 51.0 4.7 0.00016 40.3 1.2 15 647-661 27-41 (250)
239 3umg_A Haloacid dehalogenase; 50.9 4.5 0.00015 38.9 1.0 17 645-661 14-30 (254)
240 2no4_A (S)-2-haloacid dehaloge 50.6 5.3 0.00018 38.8 1.5 16 646-661 14-29 (240)
241 3l5k_A Protein GS1, haloacid d 50.5 5.5 0.00019 39.0 1.6 17 645-661 29-45 (250)
242 3sd7_A Putative phosphatase; s 50.4 5.7 0.0002 38.5 1.7 16 646-661 29-44 (240)
243 2zg6_A Putative uncharacterize 49.9 5.9 0.0002 38.3 1.7 15 647-661 4-18 (220)
244 3qnm_A Haloacid dehalogenase-l 49.3 5.3 0.00018 38.0 1.2 16 646-661 5-20 (240)
245 3qxg_A Inorganic pyrophosphata 48.7 6 0.0002 38.5 1.5 17 645-661 23-39 (243)
246 2qlt_A (DL)-glycerol-3-phospha 48.5 5.7 0.0002 40.1 1.4 15 647-661 36-50 (275)
247 2nyv_A Pgpase, PGP, phosphogly 46.9 6.5 0.00022 38.2 1.4 15 647-661 4-18 (222)
248 2g80_A Protein UTR4; YEL038W, 46.8 4.7 0.00016 41.6 0.5 81 699-787 124-215 (253)
249 4gxt_A A conserved functionall 46.0 14 0.00046 41.0 4.0 51 698-748 219-275 (385)
250 2gfh_A Haloacid dehalogenase-l 45.9 5.8 0.0002 40.1 0.9 20 642-661 14-33 (260)
251 4fe3_A Cytosolic 5'-nucleotida 45.6 12 0.0004 38.8 3.2 41 698-738 139-180 (297)
252 4g9b_A Beta-PGM, beta-phosphog 43.0 7.5 0.00026 38.7 1.2 15 647-661 6-20 (243)
253 3t7k_A RTT107, regulator of TY 42.6 49 0.0017 35.5 7.3 80 864-948 130-239 (256)
254 3k1z_A Haloacid dehalogenase-l 41.5 8.8 0.0003 38.4 1.5 15 647-661 2-16 (263)
255 2fea_A 2-hydroxy-3-keto-5-meth 41.3 10 0.00034 37.4 1.8 15 646-660 6-20 (236)
256 1y8a_A Hypothetical protein AF 39.6 9 0.00031 40.4 1.2 14 647-660 22-35 (332)
257 1yns_A E-1 enzyme; hydrolase f 36.5 10 0.00035 38.7 1.0 16 646-661 10-25 (261)
258 2g80_A Protein UTR4; YEL038W, 33.7 12 0.00042 38.4 1.1 16 646-661 31-46 (253)
259 4ap9_A Phosphoserine phosphata 31.1 7.8 0.00027 35.9 -0.8 16 646-661 9-24 (201)
260 3a1c_A Probable copper-exporti 28.2 21 0.00071 36.7 1.7 15 647-661 33-47 (287)
No 1
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-63 Score=555.29 Aligned_cols=318 Identities=32% Similarity=0.531 Sum_probs=259.5
Q ss_pred HhHHHHhhhHH--HhhhhcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhcccc-CCCcceeEeec------cceE
Q 002143 627 IQKERTRRLEE--QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDR-EKPHRHLFRFP------HMGM 697 (960)
Q Consensus 627 i~ke~akrL~~--q~~lls~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~-~~P~~~~F~l~------~~~~ 697 (960)
++.++|.++.. +++|+..+||+||||||||||||+. +|...+|.......+. ..-+...|.++ .+.|
T Consensus 5 vs~~~a~~~~~~~~~rll~~~Kl~LVLDLDeTLiHs~~----~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~ 80 (442)
T 3ef1_A 5 VSLEEASRLESENVKRLRQEKRLSLIVXLDQTIIHATV----DPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCY 80 (442)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEECCBTTTEEEEC----CTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEE
T ss_pred ecHHHHHHHHHHHHHHHHhcCCeEEEEeeccceecccc----ccccchhccCCCCcchhhhccccceeeeeccCCceeEE
Confidence 34556666665 5889999999999999999999984 5655555321100000 00123456653 2579
Q ss_pred EEeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 698 WTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 698 yVkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
||++|||+++||++|+++|||+|||++.+.||++|+++|||++.||.+|+|+|++|+. .|+|||+++||++
T Consensus 81 ~V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~--------~~~KdL~~ll~rdl 152 (442)
T 3ef1_A 81 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS--------LAQKSLRRLFPCDT 152 (442)
T ss_dssp EEEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSC--------SSCCCGGGTCSSCC
T ss_pred EEEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCC--------ceeeehHHhcCCCc
Confidence 9999999999999999999999999999999999999999999999999999998842 4899999888999
Q ss_pred CcEEEEcCCCCccccCccCcccccceecccCccc---------c-----cCC-C--CCCcc-------------------
Q 002143 777 SAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR---------Q-----FGL-L--GPSLL------------------- 820 (960)
Q Consensus 777 s~VVIVDDsp~vw~~qpdN~I~IkpY~yF~~s~~---------q-----~g~-p--~pSl~------------------- 820 (960)
++||||||++.+|..|+ |+|+|.+|+||.+..+ + +++ + .|+..
T Consensus 153 ~~vvIIDd~p~~~~~~p-N~I~I~~~~fF~~~gD~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (442)
T 3ef1_A 153 SMVVVIDDRGDVWDWNP-NLIKVVPYEFFVGIGDINSNFLAKSTPLPEQEQLIPLEIPKDEPDSVDEINEENEETPEYDS 231 (442)
T ss_dssp TTEEEEESCSGGGTTCT-TEEECCCCCCSTTCCCSCC-------------------------------------------
T ss_pred ceEEEEECCHHHhCCCC-CEEEcCCccccCCCCcccccccccccccccccccccccccccccccccccccccccCccccc
Confidence 99999999999999997 9999999999997421 1 222 1 11000
Q ss_pred ----------------------------------------c--------------ccccC----------cccchhhHHH
Q 002143 821 ----------------------------------------E--------------IDHDE----------RSEDGTLASS 836 (960)
Q Consensus 821 ----------------------------------------E--------------i~~De----------dp~D~eLlsL 836 (960)
| .+.|+ ...|++|..|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~rpl~~~q~~l~~~~~~~~~~~~~l~d~D~~L~~l 311 (442)
T 3ef1_A 232 SNSSYAQDSSTIPEKTLLKDTFLQNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDHELERL 311 (442)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTSCCSCHHHHCSCCCCCCHHHHH
T ss_pred ccccccccccccchhhhhccccCccchhhHHHHHHhhhhhhhhhccCchhhHHHHhhhhhhccccccccccCCcHHHHHH
Confidence 0 00010 1358999999
Q ss_pred HHHHHHHHhhccccCC--------CCcchhHHHHHHHHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEeccc
Q 002143 837 LGVIERLHKIFFSHQS--------LDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHI 908 (960)
Q Consensus 837 L~~Le~IH~~FF~~~~--------L~~~DVR~ILkelRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdV 908 (960)
+.+|++||++||+.++ ....||+.||+++|+++|+||+|||||++|.+. ++++..+|++|+.|||+|..++
T Consensus 312 ~~~L~~iH~~fy~~~d~~~~~~~~~~~~Dv~~il~~~k~~~L~G~~IvfSG~~p~~~-~~~r~~l~~~~~~lGa~~~~~v 390 (442)
T 3ef1_A 312 EKVLKDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGV-DVLSSDIAKWAMSFGAEVVLDF 390 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCSCCSSSCCCCHHHHHHHHHHTTSTTCEEEEESSSCTTS-CSTTSHHHHHHHTTTCEECSSS
T ss_pred HHHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHHhhcccCCcEEEEecccCCCC-CccHHHHHHHHHHcCCEEeCCC
Confidence 9999999999998753 235799999999999999999999999998764 4567899999999999999999
Q ss_pred CCCccEEEecCCCCHHHHHHHhC-CCcEEcHHHHHHHHHhccCCCCCCCCC
Q 002143 909 DDQVTHVVANSLGTDKVNWALST-GRFVVHPGWVEASALLYRRANEQDFAI 958 (960)
Q Consensus 909 d~kVTHLVAss~gT~Kv~~Alk~-GI~IVSpdWLedC~~~wkRvDEs~YlL 958 (960)
+.+||||||...+|.|+++|+++ ||+||+++||++|+..|+++||..|+|
T Consensus 391 s~~vTHLVa~~~~t~K~~~A~~~g~IkIVs~~WL~dcl~~~krldE~~YlL 441 (442)
T 3ef1_A 391 SVPPTHLIAAKIRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDYLL 441 (442)
T ss_dssp SSCCSEEEECSCCCHHHHHHHHHSSSEEEEHHHHHHHHHHTSCCCGGGTBC
T ss_pred CCCceEEEeCCCCCHHHHHHHhcCCCEEEeHHHHHHHHHcCCcCChhcccc
Confidence 99999999999999999999998 599999999999999999999999987
No 2
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-61 Score=529.02 Aligned_cols=308 Identities=32% Similarity=0.548 Sum_probs=253.8
Q ss_pred HHhhhhcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhcccc-CCCcceeEeec------cceEEEeeccCHHHHH
Q 002143 637 EQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDR-EKPHRHLFRFP------HMGMWTKLRPGIWTFL 709 (960)
Q Consensus 637 ~q~~lls~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~-~~P~~~~F~l~------~~~~yVkLRPgL~EFL 709 (960)
.+.+|+..+|++||||||||||||+. +|...+|......... ..-....|.++ .+.+||++|||+++||
T Consensus 9 ~~~rl~~~~k~~LVlDLD~TLvhS~~----~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL 84 (372)
T 3ef0_A 9 NVKRLRQEKRLSLIVDLDQTIIHATV----DPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFL 84 (372)
T ss_dssp HHHHHHHHTCEEEEECCBTTTEEEEC----CTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHH
T ss_pred HHHHHHhCCCCEEEEcCCCCcccccC----cCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHH
Confidence 45778999999999999999999974 4544444321000000 00112345543 3578999999999999
Q ss_pred HHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCCCCc
Q 002143 710 ERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRV 788 (960)
Q Consensus 710 eeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDsp~v 788 (960)
++|+++|||+|||++.+.||++|++.|||.+.||.+|+|+|++|+. .|+|||++++|++ ++||||||++.+
T Consensus 85 ~~l~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~--------~~~KdL~~L~~~dl~~viiiDd~~~~ 156 (372)
T 3ef0_A 85 QKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS--------LAQKSLRRLFPCDTSMVVVIDDRGDV 156 (372)
T ss_dssp HHHHTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSC--------SSCCCGGGTCSSCCTTEEEEESCSGG
T ss_pred HHHhcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCC--------cceecHHHhcCCCCceEEEEeCCHHH
Confidence 9999999999999999999999999999999999999999998742 4799999888998 999999999999
Q ss_pred cccCccCcccccceecccCcccccC--CCCC--Cccc------------------------ccccC----------cccc
Q 002143 789 WPHNKLNLIVVERYTYFPCSRRQFG--LLGP--SLLE------------------------IDHDE----------RSED 830 (960)
Q Consensus 789 w~~qpdN~I~IkpY~yF~~s~~q~g--~p~p--Sl~E------------------------i~~De----------dp~D 830 (960)
|..|+ |+|+|.+|+||.+..+.+. +|.. ++.+ .+.|| ...|
T Consensus 157 ~~~~p-N~I~i~~~~~f~~~~d~n~~~lp~~~~~~~~~~~~~~~~~~~q~~~~p~~~~q~~l~~~e~~~~~~~~~~~d~D 235 (372)
T 3ef0_A 157 WDWNP-NLIKVVPYEFFVGIGDINSNFLSGNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRD 235 (372)
T ss_dssp GTTCT-TEEECCCCCCSTTCCCTTC--------CCGGGGHHHHHHHHHHHHHCHHHHHHHHHHHSCCSCSGGGCSCCCCC
T ss_pred cCCCC-cEeeeCCccccCCcCccccccccccchhHHHhhhhhhhhhhhhhcccchhHHHHhhhccccccchhhccccCCh
Confidence 99997 9999999999997644322 2221 1110 01121 2358
Q ss_pred hhhHHHHHHHHHHHhhccccC--------CCCcchhHHHHHHHHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCC
Q 002143 831 GTLASSLGVIERLHKIFFSHQ--------SLDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGA 902 (960)
Q Consensus 831 ~eLlsLL~~Le~IH~~FF~~~--------~L~~~DVR~ILkelRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGA 902 (960)
++|..++.+|++||++||+.+ ....+||+.||.++|+++|+||+|||||++|.+. ++++..++++|+++||
T Consensus 236 ~~L~~~~~~L~~iH~~Ff~~~~~~~~~~~~~~~~dv~~ii~~lk~~~L~G~~ivfSG~~~~~~-~~~~~~l~~l~~~lGa 314 (372)
T 3ef0_A 236 HELERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGV-DVLSSDIAKWAMSFGA 314 (372)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHTTTSTTCEEEEESSSCTTS-CTTTSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHhhhcCCcEEEEecccCCCc-chhHHHHHHHHHHcCC
Confidence 999999999999999999873 2345899999999999999999999999998753 4567899999999999
Q ss_pred EEecccCCCccEEEecCCCCHHHHHHHhC-CCcEEcHHHHHHHHHhccCCCCCCCCC
Q 002143 903 VCTKHIDDQVTHVVANSLGTDKVNWALST-GRFVVHPGWVEASALLYRRANEQDFAI 958 (960)
Q Consensus 903 tVssdVd~kVTHLVAss~gT~Kv~~Alk~-GI~IVSpdWLedC~~~wkRvDEs~YlL 958 (960)
+|+.+++.+||||||...+|.|+++|+++ ||+||+++||++|+..|+++||+.|+|
T Consensus 315 ~v~~~vs~~vTHLVa~~~~t~K~~~A~~~~~I~IV~~~Wl~~c~~~~~~vdE~~Y~l 371 (372)
T 3ef0_A 315 EVVLDFSVPPTHLIAAKIRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDYLL 371 (372)
T ss_dssp EEESSSSSCCSEEEECSCCCHHHHHHHHSSSCCEEEHHHHHHHHHTTSCCCGGGGBC
T ss_pred EEeCcCCCCceEEEEcCCCchHHHHHHhcCCCEEEcHHHHHHHHHhCCcCChhhcee
Confidence 99999999999999999999999999998 799999999999999999999999987
No 3
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=100.00 E-value=1.6e-34 Score=295.20 Aligned_cols=184 Identities=26% Similarity=0.326 Sum_probs=141.1
Q ss_pred CcchhccCCChhHHHHHhHHHHhhhHHHhhhhcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeE
Q 002143 611 DVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLF 690 (960)
Q Consensus 611 ~f~~L~~g~~~~q~~~i~ke~akrL~~q~~lls~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F 690 (960)
++..++..|+ +... .+.|+.+..-...+|+||||||||||||+... +
T Consensus 6 ~~~~~~~~~~---~p~~----~~lLp~~~~~~~~~~~tLVLDLDeTLvh~~~~----~---------------------- 52 (204)
T 3qle_A 6 SFNSMFTYFQ---EPPF----PDLLPPPPPPPYQRPLTLVITLEDFLVHSEWS----Q---------------------- 52 (204)
T ss_dssp ----------------C----CCCSCCCC----CCSEEEEEECBTTTEEEEEE----T----------------------
T ss_pred HHHHHHHhhc---CCCc----ccCCCCCCccccCCCeEEEEeccccEEeeecc----c----------------------
Confidence 4555666554 2221 23455544334578999999999999999741 1
Q ss_pred eeccceEEEeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCC
Q 002143 691 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLE 770 (960)
Q Consensus 691 ~l~~~~~yVkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLs 770 (960)
..++||++|||+++||++|+++|||+|||++.+.||++|++.|||.+.+|.+|++ |++|.. .+| .|+|||+
T Consensus 53 ---~~~~~v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~-R~~c~~-~~g----~y~KdL~ 123 (204)
T 3qle_A 53 ---KHGWRTAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLF-KEHCVY-KDG----VHIKDLS 123 (204)
T ss_dssp ---TTEEEEEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEEC-GGGSEE-ETT----EEECCGG
T ss_pred ---cCceeEEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEE-ecceeE-ECC----eeeecHH
Confidence 1357899999999999999999999999999999999999999999889999876 777753 334 6899999
Q ss_pred cccCCC-CcEEEEcCCCCccccCccCcccccceecccCcccccCCCCCCcccccccCcccchhhHHHHHHHHHHHhhccc
Q 002143 771 GVLGME-SAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLHKIFFS 849 (960)
Q Consensus 771 rVLGrd-s~VVIVDDsp~vw~~qpdN~I~IkpY~yF~~s~~q~g~p~pSl~Ei~~Dedp~D~eLlsLL~~Le~IH~~FF~ 849 (960)
.+|++ ++||||||++.+|..|++|+|+|.+|.. + .|.+|..|++||+.|+..
T Consensus 124 -~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~~~~----------------------~-~D~eL~~L~~~L~~L~~~--- 176 (204)
T 3qle_A 124 -KLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWNG----------------------E-ADDKLVRLIPFLEYLATQ--- 176 (204)
T ss_dssp -GSCSCGGGEEEEESCTTTTTTCGGGEEECCCCCS----------------------S-CCCHHHHHHHHHHHHHHT---
T ss_pred -HhCCChHHEEEEECCHHHHhhCccCceEeeeECC----------------------C-CChhHHHHHHHHHHHhhc---
Confidence 67998 9999999999999999999999999951 2 366999999999999852
Q ss_pred cCCCCcchhHHHHHHHHH
Q 002143 850 HQSLDDVDVRNILAAEQR 867 (960)
Q Consensus 850 ~~~L~~~DVR~ILkelRr 867 (960)
...|||.+|+.++.
T Consensus 177 ----~~~DVR~~L~~~~~ 190 (204)
T 3qle_A 177 ----QTKDVRPILNSFED 190 (204)
T ss_dssp ----CCSCSHHHHTTSSC
T ss_pred ----ChHHHHHHHHHhcC
Confidence 26899999987754
No 4
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=99.97 E-value=8.9e-32 Score=267.21 Aligned_cols=167 Identities=30% Similarity=0.407 Sum_probs=138.0
Q ss_pred hcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeecc--ceEEEeeccCHHHHHHHhhcceEEE
Q 002143 642 FSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPH--MGMWTKLRPGIWTFLERASKLFEMH 719 (960)
Q Consensus 642 ls~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~--~~~yVkLRPgL~EFLeeLSk~YEIv 719 (960)
...+|++|||||||||||++.. |... .+ +...+.+.+ ..+|+++|||+++||++++++|||+
T Consensus 11 ~~~~k~~LVLDLD~TLvhs~~~----~~~~--------~d----~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~~~i~ 74 (181)
T 2ght_A 11 QDSDKICVVINLDETLVHSSFK----PVNN--------AD----FIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECV 74 (181)
T ss_dssp GGTTSCEEEECCBTTTEEEESS----CCSS--------CS----EEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEE
T ss_pred ccCCCeEEEECCCCCeECCccc----CCCC--------cc----ceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhCCCEE
Confidence 3578999999999999999752 2110 00 011112222 4689999999999999999999999
Q ss_pred EEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCCCCccccCccCccc
Q 002143 720 LYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIV 798 (960)
Q Consensus 720 IyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDsp~vw~~qpdN~I~ 798 (960)
|||++.+.||++|++.|||.+ +|.+|++ |++|.. .+| .++|+|+ .+|++ +++|||||++..|..++.|+|+
T Consensus 75 I~T~~~~~~a~~vl~~ld~~~-~f~~~~~-rd~~~~-~k~----~~~k~L~-~Lg~~~~~~vivdDs~~~~~~~~~ngi~ 146 (181)
T 2ght_A 75 LFTASLAKYADPVADLLDKWG-AFRARLF-RESCVF-HRG----NYVKDLS-RLGRDLRRVLILDNSPASYVFHPDNAVP 146 (181)
T ss_dssp EECSSCHHHHHHHHHHHCTTC-CEEEEEC-GGGSEE-ETT----EEECCGG-GTCSCGGGEEEECSCGGGGTTCTTSBCC
T ss_pred EEcCCCHHHHHHHHHHHCCCC-cEEEEEe-ccCcee-cCC----cEeccHH-HhCCCcceEEEEeCCHHHhccCcCCEeE
Confidence 999999999999999999998 8998776 777743 233 6899999 68998 9999999999999999999999
Q ss_pred ccceecccCcccccCCCCCCcccccccCcccchhhHHHHHHHHHHHhhccccCCCCcchhHHHHH
Q 002143 799 VERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILA 863 (960)
Q Consensus 799 IkpY~yF~~s~~q~g~p~pSl~Ei~~Dedp~D~eLlsLL~~Le~IH~~FF~~~~L~~~DVR~ILk 863 (960)
|.+|.. +++|.+|..|++||+.|+. .+|||.+|+
T Consensus 147 i~~~~~----------------------~~~D~eL~~l~~~L~~l~~---------~~DVr~~l~ 180 (181)
T 2ght_A 147 VASWFD----------------------NMSDTELHDLLPFFEQLSR---------VDDVYSVLR 180 (181)
T ss_dssp CCCCSS----------------------CTTCCHHHHHHHHHHHHTT---------CSCTHHHHC
T ss_pred eccccC----------------------CCChHHHHHHHHHHHHhCc---------CccHHHHhh
Confidence 999962 5788999999999999985 689999986
No 5
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=99.96 E-value=6.5e-31 Score=284.16 Aligned_cols=164 Identities=18% Similarity=0.189 Sum_probs=134.6
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhcceEEEEEc
Q 002143 643 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYT 722 (960)
Q Consensus 643 s~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk~YEIvIyT 722 (960)
..+|+||||||||||||+.. +. .++|+++||||++||++|+++|||+|||
T Consensus 137 ~~~k~tLVLDLDeTLvh~~~-----~~-------------------------~~~~~~~RP~l~eFL~~l~~~yeivIfT 186 (320)
T 3shq_A 137 REGKKLLVLDIDYTLFDHRS-----PA-------------------------ETGTELMRPYLHEFLTSAYEDYDIVIWS 186 (320)
T ss_dssp CTTCEEEEECCBTTTBCSSS-----CC-------------------------SSHHHHBCTTHHHHHHHHHHHEEEEEEC
T ss_pred cCCCcEEEEeccccEEcccc-----cC-------------------------CCcceEeCCCHHHHHHHHHhCCEEEEEc
Confidence 56899999999999999963 10 1246789999999999999999999999
Q ss_pred CCcHHHHHHHHHHhcCCCce-eeeeeeecCCCCCCCC-CCCC-CCccccCCccc----CCC-CcEEEEcCCCCccccCcc
Q 002143 723 MGNKLYATEMAKVLDPKGVL-FAGRVISRGDDGDPFD-GDER-VPKSKDLEGVL----GME-SAVVIIDDSVRVWPHNKL 794 (960)
Q Consensus 723 AgtreYAd~VLdiLDP~g~l-F~~RIySRddc~~~~d-Gder-~~yiKDLsrVL----Grd-s~VVIVDDsp~vw~~qpd 794 (960)
++.+.||++|++.|||.+.+ |.+|+| |++|+.+.. +.+. ..|+|||++++ |++ ++||||||++.+|..||+
T Consensus 187 as~~~ya~~vld~Ld~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~ 265 (320)
T 3shq_A 187 ATSMRWIEEKMRLLGVASNDNYKVMFY-LDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPK 265 (320)
T ss_dssp SSCHHHHHHHHHHTTCTTCSSCCCCEE-ECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGG
T ss_pred CCcHHHHHHHHHHhCCCCCcceeEEEE-EcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcC
Confidence 99999999999999999875 788887 666642210 0011 14899999543 888 999999999999999999
Q ss_pred CcccccceecccCcccccCCCCCCcccccccCcccchhhHHHHHHHHHHH-hhccccCCCCcchhHHHHHH
Q 002143 795 NLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLH-KIFFSHQSLDDVDVRNILAA 864 (960)
Q Consensus 795 N~I~IkpY~yF~~s~~q~g~p~pSl~Ei~~Dedp~D~eLlsLL~~Le~IH-~~FF~~~~L~~~DVR~ILke 864 (960)
|+|+|.+|.+... ++++|.+|..|++||+.|+ . ..|||.+++.
T Consensus 266 NgI~I~~~~~~~~------------------~~~~D~eL~~L~~~L~~L~~~---------~~DVr~~~~~ 309 (320)
T 3shq_A 266 SGLKIRPFRQAHL------------------NRGTDTELLKLSDYLRKIAHH---------CPDFNSLNHR 309 (320)
T ss_dssp GEEECCCCCCHHH------------------HTTTCCHHHHHHHHHHHHHHH---------CSCGGGCCGG
T ss_pred ceEEeCeEcCCCC------------------CCCccHHHHHHHHHHHHHhcc---------CcchhHHHHH
Confidence 9999999974210 2468999999999999999 4 6899999965
No 6
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.95 E-value=2.8e-28 Score=245.80 Aligned_cols=157 Identities=31% Similarity=0.414 Sum_probs=129.3
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeec--cceEEEeeccCHHHHHHHhhcceEEEE
Q 002143 643 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFP--HMGMWTKLRPGIWTFLERASKLFEMHL 720 (960)
Q Consensus 643 s~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~--~~~~yVkLRPgL~EFLeeLSk~YEIvI 720 (960)
..+|++|||||||||||+... +... .| +...+.+. ...+|+++|||+++||++++++|+|+|
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~----~~~~--------~d----~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~~~i~I 88 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFK----PISN--------AD----FIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVL 88 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESS----CCTT--------CS----EEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEE
T ss_pred cCCCeEEEEccccceEccccc----CCCC--------cc----ceeeeecCCceeeEEEEeCcCHHHHHHHHHcCCeEEE
Confidence 468999999999999999752 2110 01 00111122 246899999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCCCCccccCccCcccc
Q 002143 721 YTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVV 799 (960)
Q Consensus 721 yTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDsp~vw~~qpdN~I~I 799 (960)
||++.+.||+.|++.|||.+ +|..|++ |++|.. .++ .|+|+|+ .+|++ +++|||||++..|..++.|+|+|
T Consensus 89 ~Tss~~~~a~~vl~~ld~~~-~f~~~l~-rd~~~~-~k~----~~lK~L~-~Lg~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 89 FTASLAKYADPVADLLDRWG-VFRARLF-RESCVF-HRG----NYVKDLS-RLGRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp ECSSCHHHHHHHHHHHCCSS-CEEEEEC-GGGCEE-ETT----EEECCGG-GSSSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred EcCCCHHHHHHHHHHhCCcc-cEEEEEE-ccccee-cCC----ceeeeHh-HhCCChhHEEEEECCHHHhhhCccCccEE
Confidence 99999999999999999998 8998765 777753 222 6999999 68998 99999999999999999999999
Q ss_pred cceecccCcccccCCCCCCcccccccCcccchhhHHHHHHHHHHHh
Q 002143 800 ERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLHK 845 (960)
Q Consensus 800 kpY~yF~~s~~q~g~p~pSl~Ei~~Dedp~D~eLlsLL~~Le~IH~ 845 (960)
.+|.. +++|.+|..|++||+.|+.
T Consensus 161 ~~~~~----------------------~~~D~eL~~L~~~L~~l~~ 184 (195)
T 2hhl_A 161 QSWFD----------------------DMTDTELLDLIPFFEGLSR 184 (195)
T ss_dssp CCCSS----------------------CTTCCHHHHHHHHHHHHHC
T ss_pred eeecC----------------------CCChHHHHHHHHHHHHHHh
Confidence 99962 5789999999999999986
No 7
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=99.76 E-value=1.1e-18 Score=159.84 Aligned_cols=90 Identities=19% Similarity=0.208 Sum_probs=80.8
Q ss_pred HHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEe---cCCCCHHHHHHHhCCCcEEcHHHH
Q 002143 865 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVA---NSLGTDKVNWALSTGRFVVHPGWV 941 (960)
Q Consensus 865 lRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVA---ss~gT~Kv~~Alk~GI~IVSpdWL 941 (960)
...++|+||+|||+|+++. .+..|+++++.+||+|..+++.+|||||| ...++.|+++|+++||+||+++||
T Consensus 11 ~~~~~l~g~~i~isg~~~~-----~r~~l~~li~~~Gg~v~~~~s~~~THlI~~~~~~~~~~K~~~A~~~gi~IV~~~Wl 85 (107)
T 3l3e_A 11 EAPKPLHKVVVCVSKKLSK-----KQSELNGIAASLGADYRRSFDETVTHFIYQGRPNDTNREYKSVKERGVHIVSEHWL 85 (107)
T ss_dssp ---CTTTTCEEEECGGGGG-----GHHHHHHHHHHTTCEEESSCCTTCCEEECCCCTTCCCHHHHHHHHTTCEEECHHHH
T ss_pred cccCCCCCeEEEEeCCChH-----hHHHHHHHHHHcCCEEeccccCCceEEEecCCCCCCCHHHHHHHHCCCeEecHHHH
Confidence 4567999999999999762 46789999999999999999999999999 446689999999999999999999
Q ss_pred HHHHHhccCCCCCCCCCC
Q 002143 942 EASALLYRRANEQDFAIK 959 (960)
Q Consensus 942 edC~~~wkRvDEs~YlL~ 959 (960)
++|+..|+++||..|.+.
T Consensus 86 ~~c~~~~~~l~e~~Y~~~ 103 (107)
T 3l3e_A 86 LDCAQECKHLPESLYPHT 103 (107)
T ss_dssp HHHHHHTSCCCGGGCCTT
T ss_pred HHHHHhCCCCchhhCCCC
Confidence 999999999999999874
No 8
>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens}
Probab=99.74 E-value=2.4e-19 Score=168.32 Aligned_cols=96 Identities=19% Similarity=0.183 Sum_probs=82.8
Q ss_pred hHHHHHHHHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHhCCCcEEc
Q 002143 858 VRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVH 937 (960)
Q Consensus 858 VR~ILkelRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk~GI~IVS 937 (960)
=|+=+.++|-++|.||+|||+||.. .++..|+++++++||+|+..++++|||||+....+.||..|+++||+||+
T Consensus 10 ~~~~~~~~~~p~F~g~~Ic~sGf~~-----~er~~l~~~i~~~GG~~~~~l~~~cTHLV~~~~~~~K~~~A~~~~i~IVs 84 (112)
T 3l46_A 10 GRENLYFQGVPPFQDCILSFLGFSD-----EEKTNMEEMTEMQGGKYLPLGDERCTHLVVEENIVKDLPFEPSKKLYVVK 84 (112)
T ss_dssp --------CCCTTTTCEECEESCCH-----HHHHHHHHHHHHTTCEECCTTCTTCSEEEECTTTBSSCSSCCCSSCEEEE
T ss_pred ccccccccCCCccCCeEEEEeCCCH-----HHHHHHHHHHHHcCCEECcccCCCceEEEecCCchhhHHHHHHCCeeEec
Confidence 4566778899999999999999632 35778999999999999999999999999999988999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCC
Q 002143 938 PGWVEASALLYRRANEQDFAI 958 (960)
Q Consensus 938 pdWLedC~~~wkRvDEs~YlL 958 (960)
++||++|++.+.++||..|.+
T Consensus 85 ~eWl~dsi~~g~~ldE~~Y~~ 105 (112)
T 3l46_A 85 QEWFWGSIQMDARAGETMYLY 105 (112)
T ss_dssp HHHHHHHHHHTSCCCGGGSBC
T ss_pred HHHHHHHHHcCCccChhhcee
Confidence 999999999999999999998
No 9
>2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.73 E-value=2.9e-19 Score=165.48 Aligned_cols=92 Identities=18% Similarity=0.241 Sum_probs=84.1
Q ss_pred HHHHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHhCCCcEEcHHHHH
Q 002143 863 AAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVE 942 (960)
Q Consensus 863 kelRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk~GI~IVSpdWLe 942 (960)
.+++-++|.||+|||+|+-. .++..|+++++.+||+|+..++++||||||....+.|+++|++++++||+++||+
T Consensus 6 ~~~~~~~F~g~~i~~sg~~~-----~~r~~l~~~i~~~GG~~~~~~~~~~THLV~~~~~~~K~~~a~~~~i~IV~~~Wl~ 80 (109)
T 2cou_A 6 SGFKVPPFQDCILSFLGFSD-----EEKHSMEEMTEMQGGSYLPVGDERCTHLIVEENTVKDLPFEPSKKLFVVKQEWFW 80 (109)
T ss_dssp CSSCCCTTTTCBEEEESSCH-----HHHHHHHHHHHHHTCBCCCTTCTTCSEEEECTTTCSSCSSCCCTTSEEECHHHHH
T ss_pred ccccCCcCCCeEEEecCCCH-----HHHHHHHHHHHHcCCEEecccCCCccEEEEeCCccHHHHHHHHCCCeEecHHHHH
Confidence 35677899999999999632 3567899999999999999999999999999988999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCC
Q 002143 943 ASALLYRRANEQDFAIK 959 (960)
Q Consensus 943 dC~~~wkRvDEs~YlL~ 959 (960)
+|++.++++||..|.+.
T Consensus 81 dsi~~g~~ldE~~Y~~~ 97 (109)
T 2cou_A 81 GSIQMDARAGETMYLYE 97 (109)
T ss_dssp HHHHTTSCCCGGGTBCC
T ss_pred HHHHcCCcCChhccCCC
Confidence 99999999999999875
No 10
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=8.8e-18 Score=159.38 Aligned_cols=89 Identities=26% Similarity=0.326 Sum_probs=82.8
Q ss_pred HHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHhCCCcEEcHHHHHHHH
Q 002143 866 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASA 945 (960)
Q Consensus 866 RrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk~GI~IVSpdWLedC~ 945 (960)
..++|.||+|||+|++. +.+..|+++++.+||+|..+++.+||||||....+.||++|+++||+||+++||++|+
T Consensus 19 ~~~~f~g~~i~itG~~~-----~~r~~l~~~i~~~Gg~v~~~~s~~~ThLI~~~~~~~K~~~A~~~gi~IV~~~Wl~d~~ 93 (129)
T 2d8m_A 19 LGKILQGVVVVLSGFQN-----PFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCH 93 (129)
T ss_dssp HTTTSTTEEEEEESCCT-----THHHHHHHHHHHTTEEEESSCCTTCCEEEESSSSCHHHHHHHHHTCEEEETHHHHHHH
T ss_pred ccccCCCeEEEEeCCCc-----HHHHHHHHHHHHcCCEEeCCcCCCCeEEEecCCCChHHHHHHHCCCcEecHHHHHHHH
Confidence 45589999999999862 3577899999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCCCCC
Q 002143 946 LLYRRANEQDFAIK 959 (960)
Q Consensus 946 ~~wkRvDEs~YlL~ 959 (960)
..|++++|..|++.
T Consensus 94 ~~~~~l~e~~Y~l~ 107 (129)
T 2d8m_A 94 RMRRRLPSQRYLMA 107 (129)
T ss_dssp HTTSCCCGGGGBCS
T ss_pred HhCCcCChHhcccC
Confidence 99999999999874
No 11
>3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A*
Probab=99.67 E-value=7.2e-17 Score=150.19 Aligned_cols=94 Identities=20% Similarity=0.137 Sum_probs=81.8
Q ss_pred HHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHhCCCcEEcHHHHHHH
Q 002143 865 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEAS 944 (960)
Q Consensus 865 lRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk~GI~IVSpdWLedC 944 (960)
+..++|+||+++|.+....+. ......++.+++++||+|..++++.|||||+.+.++.|+++|++++|+||+++||++|
T Consensus 3 ~~~p~f~g~vvyvd~~~~~g~-~~~s~~l~~~l~~~GA~v~~~l~~~vTHvV~~~~~~~~~~~A~~~~i~iV~~~Wv~~C 81 (107)
T 3pa6_A 3 MAAPILKDVVAYVEVWSSNGT-ENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGVKLVSVLWVEKC 81 (107)
T ss_dssp -CCCTTTTCEEEEEEBCTTSC-CBCHHHHHHHHHHTTCEECSSCCTTCCEEEEESCCHHHHHHHHHHTCEEECHHHHHHH
T ss_pred ccccccCCEEEEEeccCCCCh-hhHHHHHHHHHHHcCCEEecccCCCccEEEEeCCCChHHHHHhcCCCEEECHHHHHHH
Confidence 467799999999988643221 1233578899999999999999999999999998889999999999999999999999
Q ss_pred HHhccCCCCCCCCCC
Q 002143 945 ALLYRRANEQDFAIK 959 (960)
Q Consensus 945 ~~~wkRvDEs~YlL~ 959 (960)
++.|+++||..|++.
T Consensus 82 ~~~~~~vdE~~Y~i~ 96 (107)
T 3pa6_A 82 RTAGAHIDESLFPAA 96 (107)
T ss_dssp HHHTSCCCGGGSBCC
T ss_pred HHhCccCChhcccCC
Confidence 999999999999873
No 12
>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=8.6e-17 Score=141.52 Aligned_cols=87 Identities=24% Similarity=0.285 Sum_probs=75.5
Q ss_pred HHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccC--CCccEEEecCCCCHHHHHHHhCCCcEEcHHHHHH
Q 002143 866 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHID--DQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEA 943 (960)
Q Consensus 866 RrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd--~kVTHLVAss~gT~Kv~~Alk~GI~IVSpdWLed 943 (960)
..++|+||+|||+|+. .+.+..|+++++.+||+|...++ .+||||||....+.|+..+ .|++||+++||++
T Consensus 4 ~~~~f~g~~~~i~g~~-----~~~~~~l~~~i~~~GG~~~~~~~~~~~~THlI~~~~~~~K~~~~--~~~~iV~~~Wi~d 76 (92)
T 4id3_A 4 SSKIFKNCVIYINGYT-----KPGRLQLHEMIVLHGGKFLHYLSSKKTVTHIVASNLPLKKRIEF--ANYKVVSPDWIVD 76 (92)
T ss_dssp --CTTTTCEEEECSCC-----SSCHHHHHHHHHHTTCEEESSCCCTTTCCEEECSCCCHHHHHHT--TTSCEECTHHHHH
T ss_pred cccccCCEEEEEeCCC-----CcCHHHHHHHHHHCCCEEEEEecCCCceEEEEecCCCHHHHHHc--CCCCEEcccHHHH
Confidence 4579999999999953 23467899999999999999999 8999999999888886433 7999999999999
Q ss_pred HHHhccCCCCCCCCCC
Q 002143 944 SALLYRRANEQDFAIK 959 (960)
Q Consensus 944 C~~~wkRvDEs~YlL~ 959 (960)
|+..++++||++|.|.
T Consensus 77 ci~~~~~l~e~~Y~l~ 92 (92)
T 4id3_A 77 SVKEARLLPWQNYSLT 92 (92)
T ss_dssp HHHHTSCCCGGGGBCC
T ss_pred HHHcCCcCChhhcccC
Confidence 9999999999999874
No 13
>2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens}
Probab=99.60 E-value=8.5e-16 Score=137.62 Aligned_cols=86 Identities=20% Similarity=0.281 Sum_probs=76.7
Q ss_pred HhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccC-CCccEEEecCCCCHHHHHHHhCCCcEEcHHHHHHHH
Q 002143 867 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHID-DQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASA 945 (960)
Q Consensus 867 rqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd-~kVTHLVAss~gT~Kv~~Alk~GI~IVSpdWLedC~ 945 (960)
.++|+||+||++|+. .+.+..|.++++.+||++..+++ ..||||||.+..+.|++.++ +++||+|+||+||+
T Consensus 10 ~~lF~g~~~~isg~~-----~~~~~~L~~~i~~~GG~~~~~~~~~~~THlI~~~~~~~k~~~~~--~~~iV~p~Wl~dci 82 (97)
T 2ebw_A 10 STIFSGVAIYVNGYT-----DPSAEELRKLMMLHGGQYHVYYSRSKTTHIIATNLPNAKIKELK--GEKVIRPEWIVESI 82 (97)
T ss_dssp CCTTTTCEEEECSSC-----SSCHHHHHHHHHHTTCEECSSCCSSSCCEEECSCCCTTHHHHTS--SSCCBCTHHHHHHH
T ss_pred CCCCCCeEEEEeCCC-----cccHHHHHHHHHHcCCEEeeecCCCCCEEEEecCCChHHHHHhc--CCCEeChHHHHHHH
Confidence 468999999999963 34567899999999999998887 68999999998889998765 99999999999999
Q ss_pred HhccCCCCCCCCCC
Q 002143 946 LLYRRANEQDFAIK 959 (960)
Q Consensus 946 ~~wkRvDEs~YlL~ 959 (960)
..++++||+.|.+-
T Consensus 83 ~~~~~l~~~~Y~l~ 96 (97)
T 2ebw_A 83 KAGRLLSYIPYQLY 96 (97)
T ss_dssp HHTSCCCSGGGBSC
T ss_pred HcCCccCchHcEec
Confidence 99999999999873
No 14
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=99.56 E-value=2.2e-15 Score=161.29 Aligned_cols=93 Identities=15% Similarity=0.176 Sum_probs=86.2
Q ss_pred HHHHHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccC-CCccEEEecCCCCHHHHHHHhCCCcEEcHHH
Q 002143 862 LAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHID-DQVTHVVANSLGTDKVNWALSTGRFVVHPGW 940 (960)
Q Consensus 862 LkelRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd-~kVTHLVAss~gT~Kv~~Alk~GI~IVSpdW 940 (960)
+..++.++|+||+|||+|+.+. ++..++++++.+||+|..+++ .+||||||....+.|+..|+++||+||+++|
T Consensus 192 ~~~~~~~~f~g~~i~~tG~~~~-----~r~~l~~li~~~GG~~~~~ls~~~~THLI~~~~~g~K~~~A~~~gi~IV~~~W 266 (298)
T 3olc_X 192 MEDFKCPIFLGCIICVTGLCGL-----DRKEVQQLTVKHGGQYMGQLKMNECTHLIVQEPKGQKYECAKRWNVHCVTTQW 266 (298)
T ss_dssp GGGGBCCTTTTCEEEECSCCHH-----HHHHHHHHHHHTTCEECSSCCTTTCCEEECSSSCSHHHHHHHHTTCEEECHHH
T ss_pred cccccccccCCeEEEEeCCCCc-----cHHHHHHHHHHcCCEEeceecCCCceEEEEeCCCchHHHHHHHCCCeEEeHHH
Confidence 4567889999999999997542 567899999999999999999 8999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCCCC
Q 002143 941 VEASALLYRRANEQDFAIK 959 (960)
Q Consensus 941 LedC~~~wkRvDEs~YlL~ 959 (960)
|++|+..|+++||..|.+.
T Consensus 267 l~dsi~~g~~lde~~Y~l~ 285 (298)
T 3olc_X 267 FFDSIEKGFCQDESIYKTE 285 (298)
T ss_dssp HHHHHHHTSCCCGGGSBSC
T ss_pred HHHHHHCCCCCCchhcCCC
Confidence 9999999999999999985
No 15
>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5
Probab=99.51 E-value=1.2e-14 Score=138.44 Aligned_cols=94 Identities=19% Similarity=0.261 Sum_probs=78.3
Q ss_pred HHHHHHHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHh---CCCcEE
Q 002143 860 NILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALS---TGRFVV 936 (960)
Q Consensus 860 ~ILkelRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk---~GI~IV 936 (960)
..+.+.+..+|+||+|+|+|+- ......|+++++.+||+|...+++.|||||+... +.+++.+.+ .+++||
T Consensus 31 ~~~~~~~~~lF~g~~i~i~G~~-----~~~~~~L~~~i~~~Gg~v~~~l~~~vTHvI~~~~-~~~~~~~~~~~~~~~~iV 104 (132)
T 1wf6_A 31 VSAFQAPEDLLDGCRIYLCGFS-----GRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDY-DDELKQFWNKSAHRPHVV 104 (132)
T ss_dssp GGGCCCCTTTTTTCEEEEESCC-----SHHHHHHHHHHHHTTCEEESSCCSSCCEEEESSC-CSHHHHHHHHSCCCCCEE
T ss_pred cccccccccccCCEEEEEECCC-----hHHHHHHHHHHHHCCCEEeCcCCCCCeEEEECCc-hHHHHHHHHhhCCCCeEe
Confidence 3556777899999999999972 2345679999999999999999999999999864 445554432 579999
Q ss_pred cHHHHHHHHHhccCCCCCCCCCC
Q 002143 937 HPGWVEASALLYRRANEQDFAIK 959 (960)
Q Consensus 937 SpdWLedC~~~wkRvDEs~YlL~ 959 (960)
+++||++|+..+++++|..|.+.
T Consensus 105 ~~~Wv~dsi~~~~ll~e~~Y~~~ 127 (132)
T 1wf6_A 105 GAKWLLECFSKGYMLSEEPYIHS 127 (132)
T ss_dssp EHHHHHHHHHHSSCCCSGGGBCC
T ss_pred chHHHHHHHHcCCcCCHhhccCC
Confidence 99999999999999999999763
No 16
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=99.50 E-value=1.5e-14 Score=146.35 Aligned_cols=89 Identities=21% Similarity=0.302 Sum_probs=79.4
Q ss_pred HHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCC------CCHHHHHHHhCCCcEEcHH
Q 002143 866 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL------GTDKVNWALSTGRFVVHPG 939 (960)
Q Consensus 866 RrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~------gT~Kv~~Alk~GI~IVSpd 939 (960)
|+..+++++||+||+.+. ++..|.++++.+||.|..++++.||||||... +|.||..|+..|++||+++
T Consensus 1 ~~~~~~~~~i~~sg~~~~-----~~~~l~~~~~~~G~~~~~~~~~~~THlI~~~~~~~~~~rt~K~~~a~~~g~~IV~~~ 75 (229)
T 1l0b_A 1 KERAERDISMVVSGLTPK-----EVMIVQKFAEKYRLALTDVITEETTHVIIKTDAEFVCERTLKYFLGIAGGKWIVSYS 75 (229)
T ss_dssp --CCCCCCEEEEESCCHH-----HHHHHHHHHHHTTCEECSSCCSSCCEEEECBCTTSEECCCHHHHHHHHTTCEEEETH
T ss_pred CCCCCCCeEEEEcCCCHH-----HHHHHHHHHHHcCCEEeCCcCCCCCEEEEcCCccccccccHHHHHHHHCCCcEecHH
Confidence 456789999999998532 35579999999999999999999999999974 7999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCCCC
Q 002143 940 WVEASALLYRRANEQDFAIK 959 (960)
Q Consensus 940 WLedC~~~wkRvDEs~YlL~ 959 (960)
||.+|++.+++++|+.|.+.
T Consensus 76 Wl~~~~~~~~~~~e~~y~~~ 95 (229)
T 1l0b_A 76 WVIKSIQERKLLSVHEFEVK 95 (229)
T ss_dssp HHHHHHTTTSCCCSGGGBCC
T ss_pred HHHHHHHCCCcCChHHeEec
Confidence 99999999999999999873
No 17
>3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} SCOP: c.15.1.1 PDB: 3pc8_A* 3qvg_B* 1cdz_A
Probab=99.48 E-value=7.8e-14 Score=129.65 Aligned_cols=89 Identities=16% Similarity=0.230 Sum_probs=81.0
Q ss_pred hhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHh--CCCcEEcHHHHHHHH
Q 002143 868 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALS--TGRFVVHPGWVEASA 945 (960)
Q Consensus 868 qILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk--~GI~IVSpdWLedC~ 945 (960)
.+|.||+++|+|.+|. .++..|++++.++||.|...++++|||+|+....+.|+..|++ .++.+|+|+||++|+
T Consensus 6 d~F~g~~f~l~~~~p~----~~r~~l~ryiia~GG~v~~~~~~~vTHvIt~~~~d~~~~~a~~~~p~~~~V~P~WI~~Ci 81 (104)
T 3pc6_A 6 DFFEGKHFFLYGEFPG----DERRRLIRYVTAFNGELEDYMNERVQFVITAQEWDPNFEEALMENPSLAFVRPRWIYSCN 81 (104)
T ss_dssp CTTTTCEEEEESCCST----THHHHHHHHHHHTTCEECSSCCTTCCEEEESSCCCHHHHHHHTTCTTCEEECHHHHHHHH
T ss_pred hhhCCeEEEEcCCCcH----HHHHHHHHHHHHcCCEEEcccCCCceEEEeCCCCChhHHHHhhhCCCCeEEccHHHHHHH
Confidence 4799999999998763 3567899999999999999999999999999999999998885 379999999999999
Q ss_pred HhccCCCCCCCCCCC
Q 002143 946 LLYRRANEQDFAIKP 960 (960)
Q Consensus 946 ~~wkRvDEs~YlL~p 960 (960)
.+++++++++|++-|
T Consensus 82 ~~~klvp~~~y~~~~ 96 (104)
T 3pc6_A 82 EKQKLLPHQLYGVVP 96 (104)
T ss_dssp HHTSCCCGGGGBCCC
T ss_pred hcCccCCcccceecc
Confidence 999999999999876
No 18
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=99.45 E-value=9.4e-14 Score=139.74 Aligned_cols=84 Identities=21% Similarity=0.193 Sum_probs=76.7
Q ss_pred cCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecC---CCCHHHHHHHhCCCcEEcHHHHHHHHHh
Q 002143 871 AGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANS---LGTDKVNWALSTGRFVVHPGWVEASALL 947 (960)
Q Consensus 871 kGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss---~gT~Kv~~Alk~GI~IVSpdWLedC~~~ 947 (960)
.|++||+||+.+ .++..+.++++.|||.+..++++.|||||+.. .+|.|+..|+..|++||+++||.+|++.
T Consensus 1 ~~~vi~~sg~~~-----~~~~~l~~~~~~~G~~~~~~~~~~~THlV~~~~~~~rt~K~l~a~~~g~~IV~~~Wl~~c~~~ 75 (210)
T 2nte_A 1 GPLVLIGSGLSS-----EQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRR 75 (210)
T ss_dssp CCCEEEESSCCH-----HHHHHHHHHHHHTTCEEESSCCTTCCEEEESSSSCCCSHHHHHHHHTTCEEEETHHHHHHHHH
T ss_pred CCEEEEECCCCH-----HHHHHHHHHHHHcCCEEeCCCCCCCeEEEEcCCCcchHHHHHHHHhcCCEEecHHHHHHHHHc
Confidence 378999999743 24567999999999999999999999999987 7899999999999999999999999999
Q ss_pred ccCCCCCCCCCC
Q 002143 948 YRRANEQDFAIK 959 (960)
Q Consensus 948 wkRvDEs~YlL~ 959 (960)
++++||+.|.+.
T Consensus 76 ~~~~~e~~y~~~ 87 (210)
T 2nte_A 76 KVCEQEEKYEIP 87 (210)
T ss_dssp TSCCCGGGTBCT
T ss_pred CCcCChhhccCC
Confidence 999999999874
No 19
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=99.44 E-value=1e-13 Score=138.07 Aligned_cols=84 Identities=26% Similarity=0.340 Sum_probs=75.6
Q ss_pred cCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCC------CCHHHHHHHhCCCcEEcHHHHHHH
Q 002143 871 AGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL------GTDKVNWALSTGRFVVHPGWVEAS 944 (960)
Q Consensus 871 kGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~------gT~Kv~~Alk~GI~IVSpdWLedC 944 (960)
+|++||+||+.+. ++..+.++++.+||.+..++++.||||||... +|.||..|+..|++||+++||.+|
T Consensus 3 ~~~~~~~sg~~~~-----~~~~l~~~~~~~G~~~~~~~~~~~THli~~~~~~~~~~rt~k~~~a~~~g~~IV~~~Wl~~~ 77 (214)
T 1t15_A 3 KRMSMVVSGLTPE-----EFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQS 77 (214)
T ss_dssp -CCEEEEESCCHH-----HHHHHHHHHHHHTCEECSSCCTTCCEEEECBCTTSEECCBHHHHHHHHTTCEEEETHHHHHH
T ss_pred CcEEEEECCCCHH-----HHHHHHHHHHHhCCEEeCccCCCCcEEEEeCCcccchhhhHHHHHHHhcCCEEeCHHHHHHH
Confidence 6899999997432 45678999999999999999999999999974 599999999999999999999999
Q ss_pred HHhccCCCCCCCCCC
Q 002143 945 ALLYRRANEQDFAIK 959 (960)
Q Consensus 945 ~~~wkRvDEs~YlL~ 959 (960)
++.+++++|+.|.+.
T Consensus 78 ~~~~~~~~e~~y~~~ 92 (214)
T 1t15_A 78 IKERKMLNEHDFEVR 92 (214)
T ss_dssp HHTTSCCCGGGGBCC
T ss_pred HHCCCcCChHHeEee
Confidence 999999999999874
No 20
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=99.41 E-value=3.3e-13 Score=136.66 Aligned_cols=86 Identities=14% Similarity=0.184 Sum_probs=72.0
Q ss_pred HHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCC-CCHHHHHHHhCCCcEEcHHHHHH
Q 002143 865 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL-GTDKVNWALSTGRFVVHPGWVEA 943 (960)
Q Consensus 865 lRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~-gT~Kv~~Alk~GI~IVSpdWLed 943 (960)
-+++.++|++|+|||+.+ ..+.++++.|||.|..+++ +||||||... +|.|+..|+..|++||+++||++
T Consensus 5 ~~~~~~~~~~v~~sG~~~--------~~~~~~i~~lGg~~~~~~~-~~THlI~~~~~rt~K~l~a~~~g~~IV~~~Wl~~ 75 (209)
T 2etx_A 5 KLNQESTAPKVLFTGVVD--------ARGERAVLALGGSLAGSAA-EASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQ 75 (209)
T ss_dssp -------CCEEEECSSCC--------HHHHHHHHHTTCEECSSTT-TCSEEECSSCCCSHHHHHHHHHTCCEECTHHHHH
T ss_pred cccccCCCcEEEEeCCCc--------HHHHHHHHHCCCEEeCCCC-CceEEEECCCCCCHHHHHHHhcCCccccHHHHHH
Confidence 467889999999999843 2467899999999999998 4999999874 79999999999999999999999
Q ss_pred HHHhccCCCCCCCCCC
Q 002143 944 SALLYRRANEQDFAIK 959 (960)
Q Consensus 944 C~~~wkRvDEs~YlL~ 959 (960)
|+..++.++|+.|.+.
T Consensus 76 ~~~~~~~l~e~~y~~~ 91 (209)
T 2etx_A 76 SRKAGFFLPPDEYVVT 91 (209)
T ss_dssp HHHHTSCCCSGGGBCC
T ss_pred HHHcCCCCChhhcccc
Confidence 9999999999999874
No 21
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=99.38 E-value=3e-13 Score=139.00 Aligned_cols=89 Identities=19% Similarity=0.276 Sum_probs=78.8
Q ss_pred HHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecC-CCCHHHHHHHhCCCcEEcHHHHHH
Q 002143 865 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANS-LGTDKVNWALSTGRFVVHPGWVEA 943 (960)
Q Consensus 865 lRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss-~gT~Kv~~Alk~GI~IVSpdWLed 943 (960)
++-..+.|++|||||+.+. ++..+.++++.+||.|..++ .+||||||.. .+|.|+.+|+..|++||+++||.+
T Consensus 9 ~~~~~~~~~~i~~SG~~~~-----~~~~l~~~i~~lGg~v~~~~-~~~THLI~~~~~rT~K~l~A~~~g~~IVs~~Wl~~ 82 (219)
T 3sqd_A 9 MKLTPELTPFVLFTGFEPV-----QVQQYIKKLYILGGEVAESA-QKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEE 82 (219)
T ss_dssp CCCCGGGCCEEEECSCCHH-----HHHHHHHHHHHTTCEECSSG-GGCSEEECSSCCCCHHHHHHTTTCSEEECHHHHHH
T ss_pred cccCCCCCeEEEEeCCChH-----HHHHHHHHHHHCCCEEeCCC-CCceEEEECCCCCCHHHHHHHHcCCCEecHHHHHH
Confidence 3445799999999997432 34578899999999999987 8999999987 578999999999999999999999
Q ss_pred HHHhccCCCCCCCCCC
Q 002143 944 SALLYRRANEQDFAIK 959 (960)
Q Consensus 944 C~~~wkRvDEs~YlL~ 959 (960)
|++.++.+||++|.+.
T Consensus 83 c~~~~~~l~e~~y~l~ 98 (219)
T 3sqd_A 83 CFRCQKFIDEQNYILR 98 (219)
T ss_dssp HHHHTSCCCSGGGBCC
T ss_pred HHHcCCCCChHhccCC
Confidence 9999999999999874
No 22
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=99.33 E-value=1.4e-12 Score=135.33 Aligned_cols=87 Identities=18% Similarity=0.285 Sum_probs=75.9
Q ss_pred hhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEec--ccCCCccEEEecCC-CCHHHHHHHhCCCcEEcHHHHHHH
Q 002143 868 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTK--HIDDQVTHVVANSL-GTDKVNWALSTGRFVVHPGWVEAS 944 (960)
Q Consensus 868 qILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVss--dVd~kVTHLVAss~-gT~Kv~~Alk~GI~IVSpdWLedC 944 (960)
++.++.+|+|||+.+ +++..++++++.|||.|.. +++++||||||... .|.|+..|+..|++||+++||.+|
T Consensus 5 ~~~~~~~~~~Sg~~~-----~~~~~l~~~i~~LGg~~~~~~~~~~~~THlV~~~~~RT~K~l~aia~G~wIvs~~wl~~s 79 (235)
T 3al2_A 5 SLKKQYIFQLSSLNP-----QERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEAC 79 (235)
T ss_dssp ---CCCEEEEESCCH-----HHHHHHHHHHHHTTCEECCSSSCCTTCCEEEESSCCCSHHHHHHHHTTCEEECTHHHHHH
T ss_pred cCCCCEEEEEcCCCH-----HHHHHHHHHHHHcCCEEeccCCCCCCCcEEEECCCCCCHHHHHHHHcCCcCccHHHHHHH
Confidence 345789999999742 2456799999999999975 58899999999985 699999999999999999999999
Q ss_pred HHhccCCCCCCCCCC
Q 002143 945 ALLYRRANEQDFAIK 959 (960)
Q Consensus 945 ~~~wkRvDEs~YlL~ 959 (960)
++.++.+||+.|.|.
T Consensus 80 ~~~g~~l~E~~ye~~ 94 (235)
T 3al2_A 80 RTAGHFVQEEDYEWG 94 (235)
T ss_dssp HHHTSCCCSGGGBTT
T ss_pred HHcCCCCChhceeec
Confidence 999999999999985
No 23
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=99.27 E-value=5.1e-12 Score=135.32 Aligned_cols=83 Identities=13% Similarity=0.229 Sum_probs=75.6
Q ss_pred hhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHhCCCcEEcHHHHHHHHHh
Q 002143 868 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALL 947 (960)
Q Consensus 868 qILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk~GI~IVSpdWLedC~~~ 947 (960)
.+|+|++||+||+.+. ++..+.++++.+||++..+++.+||||||...+|.||.+|.+.||+||+++||.+|+..
T Consensus 104 ~~l~g~~~~~tG~~~~-----~r~~l~~~i~~~GG~v~~~~t~~tTHLI~~~~~t~Ky~~A~~~gi~IV~~~Wl~~c~~~ 178 (298)
T 3olc_X 104 MVMSDVTISCTSLEKE-----KREEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEK 178 (298)
T ss_dssp CTTTTCEEEEESCCHH-----HHHHHHHHHHHTTCEECSSCCTTCCEEEESSSCSHHHHHHHHTTCCEECHHHHHHHHHH
T ss_pred cccCCeEEEeCCCcHH-----hHHHHHHHHHHCCCEEecCcCCCeeEEEEeCCCChHHHHHHHCCCeEeeHHHHHHHHHc
Confidence 4899999999998652 46789999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCC
Q 002143 948 YRRANEQD 955 (960)
Q Consensus 948 wkRvDEs~ 955 (960)
++.+++..
T Consensus 179 ~~~~~~~~ 186 (298)
T 3olc_X 179 SQEKKITR 186 (298)
T ss_dssp HHTTCCSS
T ss_pred CCcCCccc
Confidence 88776543
No 24
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=99.25 E-value=6.2e-12 Score=127.23 Aligned_cols=84 Identities=19% Similarity=0.265 Sum_probs=73.8
Q ss_pred cCceeeeeecccCCCCCCCChhHHHHHHHhCC-EEecccCCCccEEEecC-CCCHHHHHHHhCCCcEEcHHHHHHHHHhc
Q 002143 871 AGCRIVFSRVFPVGEANPHLHPLWQTAEQFGA-VCTKHIDDQVTHVVANS-LGTDKVNWALSTGRFVVHPGWVEASALLY 948 (960)
Q Consensus 871 kGcvIvFSG~fP~~~~npe~~~LwklAe~LGA-tVssdVd~kVTHLVAss-~gT~Kv~~Alk~GI~IVSpdWLedC~~~w 948 (960)
..-+|++||+- ..++..+.++++.||| .++.++++.||||||.. .+|.|+..|+..|++||+++||.+|++.+
T Consensus 10 ~~~~~~~sgl~-----~~~~~~l~~~i~~lgG~~~~~~~~~~~THlv~~~~~rT~K~l~ai~~g~~Iv~~~Wv~~~~~~g 84 (199)
T 3u3z_A 10 PTRTLVMTSMP-----SEKQNVVIQVVDKLKGFSIAPDVCETTTHVLSGKPLRTLNVLLGIARGCWVLSYDWVLWSLELG 84 (199)
T ss_dssp CCCEEEEESCC-----HHHHHHHHHHHHHHCSCEEESSCCTTEEEEEESSCCCBHHHHHHHHTTCEEEETHHHHHHHHHT
T ss_pred CCeEEEEcCCC-----HHHHHHHHHHHHHcCCcEEecCCCCCCeEEEECCCCCCHHHHHHHHCCCcEEeHHHHHHHhhCC
Confidence 35578999972 2245678899999977 78899999999999988 58999999999999999999999999999
Q ss_pred cCCCCCCCCCC
Q 002143 949 RRANEQDFAIK 959 (960)
Q Consensus 949 kRvDEs~YlL~ 959 (960)
+++||+.|.+.
T Consensus 85 ~~l~e~~y~~~ 95 (199)
T 3u3z_A 85 HWISEEPFELS 95 (199)
T ss_dssp SCCCSGGGBCT
T ss_pred CCCChhhcccc
Confidence 99999999874
No 25
>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*
Probab=99.20 E-value=8.6e-12 Score=128.70 Aligned_cols=82 Identities=17% Similarity=0.253 Sum_probs=71.4
Q ss_pred hhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCC-CCHHHHHHHhCCCcEEcHHHHHHHHHh
Q 002143 869 ILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL-GTDKVNWALSTGRFVVHPGWVEASALL 947 (960)
Q Consensus 869 ILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~-gT~Kv~~Alk~GI~IVSpdWLedC~~~ 947 (960)
.-++.+|+|||+-+. ...++++.|||.+..+++ +||||||... +|.|+.+|+..|++||+++||.+|+..
T Consensus 5 ~~~~~~v~fSG~~~~--------~~~~~i~~lGg~v~~~~~-~~THlV~~~~~RT~K~l~Aia~g~~IVs~~Wl~~~~~~ 75 (220)
T 3l41_A 5 ASKRVYITFTGYDKK--------PSIDNLKKLDMSITSNPS-KCTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKT 75 (220)
T ss_dssp --CCEEEEECSCSSC--------CCCGGGGGGTEEECSCTT-TCSEEECSSCCCBHHHHHHGGGCCEEECHHHHHHHHHH
T ss_pred ccceEEEEEeccCCC--------CCcchHhhcceeeccCch-hhhhhhhhhHhhhcceeecCCCCCeEEEhHHHHhhhhh
Confidence 457889999998543 126778899999999986 6999999874 799999999999999999999999999
Q ss_pred ccCCCCCCCCCC
Q 002143 948 YRRANEQDFAIK 959 (960)
Q Consensus 948 wkRvDEs~YlL~ 959 (960)
++.+||++|.+.
T Consensus 76 ~~~l~e~~y~l~ 87 (220)
T 3l41_A 76 HEIVDEEPYLLN 87 (220)
T ss_dssp TSCCCSGGGBCC
T ss_pred hhccccCccccC
Confidence 999999999874
No 26
>2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens}
Probab=99.14 E-value=6.8e-11 Score=109.65 Aligned_cols=93 Identities=18% Similarity=0.180 Sum_probs=70.8
Q ss_pred HHHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHH-Hh-----CCCcEEc
Q 002143 864 AEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWA-LS-----TGRFVVH 937 (960)
Q Consensus 864 elRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~A-lk-----~GI~IVS 937 (960)
+....+|+||+++| +|.+...+.+.-....|.++||++..++++.|||||+-+..+.|-.+. ++ .+++||+
T Consensus 6 ~~~~~~F~g~~v~~---~p~~~~~~r~~i~~~~a~~~Ga~v~~~~~~~vTHVVvd~~~s~~~~l~~l~~~~l~~~~~iV~ 82 (106)
T 2jw5_A 6 EEAEEWLSSLRAHV---VRTGIGRARAELFEKQIVQHGGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVK 82 (106)
T ss_dssp CCGGGCGGGSCCCB---CTTTCCSSSTTHHHHHHHHTTCCCCSTTCTTCCEEEECSSSCHHHHHHHTTCSSCCSSCEEEE
T ss_pred ccCcCEeCCeEEEE---EecCCchHHHHHHHHHHHHcCCEEeeccCCCccEEEEcCCCCHHHHHHHHhhcccCCCcEEec
Confidence 45778999999996 444432233333445899999999999999999999975444443222 11 3578999
Q ss_pred HHHHHHHHHhccCCCCCCCCCC
Q 002143 938 PGWVEASALLYRRANEQDFAIK 959 (960)
Q Consensus 938 pdWLedC~~~wkRvDEs~YlL~ 959 (960)
++|+++|++.|+.+||..|.+.
T Consensus 83 ~~Wv~dci~~~~llde~~y~~~ 104 (106)
T 2jw5_A 83 SAWLSLCLQERRLVDVAGFSIF 104 (106)
T ss_dssp HHHHHHHHHTCSCCCGGGTBCS
T ss_pred CchHHHHHhcCcccCccccccc
Confidence 9999999999999999999875
No 27
>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*
Probab=99.13 E-value=1e-10 Score=122.91 Aligned_cols=93 Identities=12% Similarity=0.084 Sum_probs=67.9
Q ss_pred HHhhhcCceeeeeecccCCCCCC---C-C-hhHHHHHHHhCCEEecccCCCccEEEecCCCC-HHHHHHHh----CCCcE
Q 002143 866 QRKILAGCRIVFSRVFPVGEANP---H-L-HPLWQTAEQFGAVCTKHIDDQVTHVVANSLGT-DKVNWALS----TGRFV 935 (960)
Q Consensus 866 RrqILkGcvIvFSG~fP~~~~np---e-~-~~LwklAe~LGAtVssdVd~kVTHLVAss~gT-~Kv~~Alk----~GI~I 935 (960)
+..+|+||+++|.+.-..+.... . + ..+..++..+||+|...+++.|||||+....+ .+...+++ .+++|
T Consensus 161 ~~~lF~~~~vy~~~~~~~~~~~~~i~~~~l~~~~~~i~~~GG~v~~~l~~~vTHVVv~~~~~r~~~~~~~~~~~~~~~~i 240 (263)
T 3ii6_X 161 PLSMFRRHTVYLDSYAVINDLSTKNEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKI 240 (263)
T ss_dssp GGGTTTTCEEEECCBSSTTCGGGBCCSSHHHHHHHHHHHTTCEEESSCCTTCCEEEECSCCTTHHHHHHHHHTCSSCCEE
T ss_pred cchhhCCeEEEEecccccCCcccccchhHHHHHHHHHHccCCEEecCCCCCceEEEECCCCccHHHHHHHHhhcCCCCEE
Confidence 45689999999976432221100 1 1 12356789999999999999999999986433 11122222 36899
Q ss_pred EcHHHHHHHHHhccCCCCCCCCC
Q 002143 936 VHPGWVEASALLYRRANEQDFAI 958 (960)
Q Consensus 936 VSpdWLedC~~~wkRvDEs~YlL 958 (960)
|+++||++|++.++++||++|.|
T Consensus 241 V~~~Wv~dci~~~~~l~E~~Y~i 263 (263)
T 3ii6_X 241 LKESWVTDSIDKCELQEENQYLI 263 (263)
T ss_dssp EETHHHHHHHHTTSCCCGGGTBC
T ss_pred eChHHHHHHHHcCCcCCHhhCCC
Confidence 99999999999999999999986
No 28
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=99.08 E-value=1.5e-10 Score=121.66 Aligned_cols=93 Identities=12% Similarity=0.129 Sum_probs=78.5
Q ss_pred HhhhcCceeeeeecccCCCC------------------------CCCChhHHHHHHHhCCEEecccCCC------ccEEE
Q 002143 867 RKILAGCRIVFSRVFPVGEA------------------------NPHLHPLWQTAEQFGAVCTKHIDDQ------VTHVV 916 (960)
Q Consensus 867 rqILkGcvIvFSG~fP~~~~------------------------npe~~~LwklAe~LGAtVssdVd~k------VTHLV 916 (960)
..+|.||.+++|+....... .-.+..|.++++.+||.|..++++. +||||
T Consensus 13 ~~iF~g~~F~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~I~~~GG~v~~~~~~~~~~~~~~t~LI 92 (259)
T 1kzy_C 13 KTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLI 92 (259)
T ss_dssp TTTTTTEEEEECCCC---------------------------CCCCCHHHHHHHHHTTTCEECSSCCTTTTTTTCEEEEE
T ss_pred CcCcCCcEEEEEcccccccccccccccccccccccccccccccCcccHHHHHHHHHHCCCEEecCccccccccCCCeEEE
Confidence 67999999999998653110 0123579999999999999999865 79999
Q ss_pred ecC-CCCHHHHHHHhCCCcEEcHHHHHHHHHhccCCCCCCCCCC
Q 002143 917 ANS-LGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 959 (960)
Q Consensus 917 Ass-~gT~Kv~~Alk~GI~IVSpdWLedC~~~wkRvDEs~YlL~ 959 (960)
+.. .+|.|+.+|+..|++||+++||.+|+..++.+|+..|++.
T Consensus 93 a~~~~rt~K~l~ala~g~~iVs~~Wl~dc~~~~~~l~~~~Y~l~ 136 (259)
T 1kzy_C 93 ADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLP 136 (259)
T ss_dssp ESSCCCSHHHHHHHHHTCCEEETHHHHHHHHHTSCCCGGGSBCC
T ss_pred cCCCCCcHHHHHHHhcCCCCccHHHHHHHHHcCCcCCHHHccCC
Confidence 977 7899999999999999999999999999999999999874
No 29
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=99.04 E-value=3.2e-10 Score=118.04 Aligned_cols=86 Identities=17% Similarity=0.188 Sum_probs=74.2
Q ss_pred hhcCceeeeeec--ccCCCCCCCChhHHHHHHHhCCEEecc-----c--CC-------------------CccEEEecC-
Q 002143 869 ILAGCRIVFSRV--FPVGEANPHLHPLWQTAEQFGAVCTKH-----I--DD-------------------QVTHVVANS- 919 (960)
Q Consensus 869 ILkGcvIvFSG~--fP~~~~npe~~~LwklAe~LGAtVssd-----V--d~-------------------kVTHLVAss- 919 (960)
+|+||.+|++|. ++ ...+..|.++++++||++..+ + .. ..||||+..
T Consensus 2 lF~g~~F~ls~~~~~~----~~~k~~L~~~I~~~GG~v~~~g~~~lf~~~~~~~~~~~~~~k~~~~~~~~~~t~lia~~~ 77 (241)
T 2vxb_A 2 IFDDCVFAFSGPVHED----AYDRSALETVVQDHGGLVLDTGLRPLFNDPFKSKQKKLRHLKPQKRSKSWNQAFVVSDTF 77 (241)
T ss_dssp TTTTEEEEECCCSSTT----SSCHHHHHHHHHHTTCEECTTCSGGGBCCSCC----CCCSCCBCGGGGGCSEEEEECSSC
T ss_pred CCCCcEEEEecCCCCc----hhhHHHHHHHHHHCCCEEecCcchhhccCccccccccccccccccccccccceEEEcCCC
Confidence 799999999997 32 234578999999999999887 2 11 249999987
Q ss_pred CCCHHHHHHHhCCCcEEcHHHHHHHHHhccCCCCCCCCC
Q 002143 920 LGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 958 (960)
Q Consensus 920 ~gT~Kv~~Alk~GI~IVSpdWLedC~~~wkRvDEs~YlL 958 (960)
..|.||.+|++.|++||+++||.+|+...+.+|+..|+|
T Consensus 78 ~rt~K~~~ala~gipiV~~~Wi~dc~~~~~~~~~~~ylL 116 (241)
T 2vxb_A 78 SRKVKYLEALAFNIPCVHPQFIKQCLKMNRVVDFSPYLL 116 (241)
T ss_dssp CCCHHHHHHHHHTCCEECTHHHHHHHHHTSCCCSGGGBB
T ss_pred CCcHHHHHHHHcCCCEecHHHHHHHHHcCCcCChhhccC
Confidence 459999999999999999999999999999999999987
No 30
>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*
Probab=98.99 E-value=5e-10 Score=117.75 Aligned_cols=91 Identities=15% Similarity=0.144 Sum_probs=73.9
Q ss_pred HHHHHHhhhcCceeee-eecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHhCC-CcEEcHH
Q 002143 862 LAAEQRKILAGCRIVF-SRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTG-RFVVHPG 939 (960)
Q Consensus 862 LkelRrqILkGcvIvF-SG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk~G-I~IVSpd 939 (960)
|.....++|+|++||+ +|. ..+.+..|.+++.++||+|..+.++.+||+||.+ .+.|++.|+++| ++||+|+
T Consensus 3 ~~~~~s~lF~G~~f~V~sg~-----~~~~k~~L~~lI~~~GG~v~~n~~~~t~~iIa~~-~~~k~~~~~~~g~~~IV~p~ 76 (263)
T 3ii6_X 3 MGSKISNIFEDVEFCVMSGT-----DSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGS-ENIRVKNIILSNKHDVVKPA 76 (263)
T ss_dssp ---CCCCTTTTCEEEECCCC-------CCHHHHHHHHHHTTCEECSSCCTTEEEEECSS-CCHHHHHHHHSCSCCEECHH
T ss_pred CCCcCcccCCCeEEEEEcCC-----CCCCHHHHHHHHHHcCCEEEecCCCCEEEEEeCC-CCHHHHHHHhcCCCCEeehH
Confidence 3445678999999987 563 2345678999999999999999988777777765 459999999987 9999999
Q ss_pred HHHHHHHhccCCCCCCCCC
Q 002143 940 WVEASALLYRRANEQDFAI 958 (960)
Q Consensus 940 WLedC~~~wkRvDEs~YlL 958 (960)
||.+|+.+++.++.+.|.+
T Consensus 77 Wv~Dci~~~~llp~~p~~~ 95 (263)
T 3ii6_X 77 WLLECFKTKSFVPWQPRFM 95 (263)
T ss_dssp HHHHHHHHTSCCCCCGGGE
T ss_pred HHHHHHhcCCcCCCCHHHH
Confidence 9999999999999887753
No 31
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=98.98 E-value=3.8e-10 Score=102.67 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=69.3
Q ss_pred HhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHhCCCcEEcHHHHHHHHH
Q 002143 867 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASAL 946 (960)
Q Consensus 867 rqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk~GI~IVSpdWLedC~~ 946 (960)
..+|.|.+|||+|.++. .+.++..+++.+||+|...++.++|||||....+.|+++|.++||+||+.+|+.+++.
T Consensus 5 ~~~l~G~~~v~TG~l~~-----~R~e~~~~i~~~Gg~v~~sVskkt~~LV~g~~~gsK~~kA~~lgI~Ii~E~~f~~~l~ 79 (92)
T 1l7b_A 5 GEALKGLTFVITGELSR-----PREEVKALLRRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVPTLTEEELYRLLE 79 (92)
T ss_dssp CCSSTTCEEECSTTTTS-----CHHHHHHHHHHTTCEEESCCSSSCCCBEECSSSSTTHHHHHCSSSCCEEHHHHHHHHH
T ss_pred CCCcCCcEEEEecCCCC-----CHHHHHHHHHHcCCEEeCcccCCeeEEEeCCCCChHHHHHHHcCCcEEeHHHHHHHHH
Confidence 35699999999998753 4678999999999999999999999999998878999999999999999999999886
Q ss_pred h
Q 002143 947 L 947 (960)
Q Consensus 947 ~ 947 (960)
.
T Consensus 80 ~ 80 (92)
T 1l7b_A 80 A 80 (92)
T ss_dssp H
T ss_pred h
Confidence 4
No 32
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=98.90 E-value=3.9e-09 Score=98.78 Aligned_cols=79 Identities=14% Similarity=0.103 Sum_probs=69.8
Q ss_pred HHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCC-HHHHHHHhCCCcEEcHHHHHHH
Q 002143 866 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGT-DKVNWALSTGRFVVHPGWVEAS 944 (960)
Q Consensus 866 RrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT-~Kv~~Alk~GI~IVSpdWLedC 944 (960)
...+|.|.+|||+|.++.. .+.++.++++.+||+|...|+.+++|||+....+ .|+.+|.++||+||+.+|+.++
T Consensus 29 ~~~~l~G~~~v~TG~l~~~----~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~~~g~sK~~kA~~lgI~Ii~E~~f~~l 104 (109)
T 2k6g_A 29 AENCLEGLIFVITGVLESI----ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNL 104 (109)
T ss_dssp CTTTTTTCEEEEESBCSSC----CHHHHHHHHHHTTCEEESSCCTTCCEEEECBCCCHHHHHHHHHHTCEEECHHHHHHH
T ss_pred CCCCCCCCEEEEeeeCCCC----CHHHHHHHHHHcCCEeeCcccCCceEEEECCCCChHHHHHHHHcCCeEEeHHHHHHH
Confidence 3457999999999998542 3678999999999999999999999999997555 9999999999999999999999
Q ss_pred HHhc
Q 002143 945 ALLY 948 (960)
Q Consensus 945 ~~~w 948 (960)
+...
T Consensus 105 l~~~ 108 (109)
T 2k6g_A 105 IRNL 108 (109)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 8653
No 33
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=98.87 E-value=5.3e-10 Score=116.15 Aligned_cols=90 Identities=16% Similarity=0.082 Sum_probs=52.0
Q ss_pred HHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCC--H----HHHHHHhC-------
Q 002143 865 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGT--D----KVNWALST------- 931 (960)
Q Consensus 865 lRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT--~----Kv~~Alk~------- 931 (960)
....+|+||+++|+|..+.. ....+..++..+||++..+++..+||||+...+. . +++..+..
T Consensus 156 ~~~~lF~g~~~yl~~~~~~~----~~~~l~~~i~~~GG~v~~~l~~~t~hVV~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (264)
T 1z56_C 156 FPLFLFSNRIAYVPRRKIST----EDDIIEMKIKLFGGKITDQQSLCNLIIIPYTDPILRKDCMNEVHEKIKEQIKASDT 231 (264)
T ss_dssp CCCC------------------------CHHHHHHHTTSCCCCSSSCSEEECCCSSTTTHHHHSSHHHHTTTTTTTSSSS
T ss_pred CchhhhCCeEEEEecCCCch----hHHHHHHHHHHcCCEEecccCCCEEEEEeCCCccchHHHHHHHHHHHHhhcccccc
Confidence 34668999999999974321 2334667799999999999997788888754332 2 23322221
Q ss_pred --CC-cEEcHHHHHHHHHhccCCCCCCCCC
Q 002143 932 --GR-FVVHPGWVEASALLYRRANEQDFAI 958 (960)
Q Consensus 932 --GI-~IVSpdWLedC~~~wkRvDEs~YlL 958 (960)
++ +||+++||++|++.++++||..|.+
T Consensus 232 ~~~~~~iV~~~Wv~dci~~~~ll~e~~Y~~ 261 (264)
T 1z56_C 232 IPKIARVVAPEWVDHSINENCQVPEEDFPV 261 (264)
T ss_dssp CCCCCEEECTHHHHHHHTTSCCCSSCCC--
T ss_pred cCCCCEEecHHHHHHHHHcCCcCCHHHcCC
Confidence 34 9999999999999999999999975
No 34
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.82 E-value=7e-09 Score=97.72 Aligned_cols=77 Identities=16% Similarity=0.145 Sum_probs=68.9
Q ss_pred HhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCC-CCHHHHHHHhCCCcEEcHHHHHHHH
Q 002143 867 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSL-GTDKVNWALSTGRFVVHPGWVEASA 945 (960)
Q Consensus 867 rqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~-gT~Kv~~Alk~GI~IVSpdWLedC~ 945 (960)
..+|.|.+|||+|.+... .+.++.++++.+||+|...|+.+++|||+... ++.|+.+|.++||+||+.+||.+++
T Consensus 20 ~~~l~G~~~v~TG~l~~~----~R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~~~g~sKl~KA~~lgI~IisE~~f~~ll 95 (112)
T 2ebu_A 20 ENCLEGLIFVITGVLESI----ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLI 95 (112)
T ss_dssp SSSSTTCEEEECSCCSSS----CHHHHHHHHHHTTCEECSSCCSSCCEEEECSSCCSHHHHHHHHHTCEEEEHHHHHHHH
T ss_pred CCCcCCCEEEEeeeCCCC----CHHHHHHHHHHcCCEEeccccCCeeEEEecCCCChHHHHHHHHcCCeEEeHHHHHHHH
Confidence 357999999999998542 46789999999999999999999999999975 4599999999999999999999999
Q ss_pred Hh
Q 002143 946 LL 947 (960)
Q Consensus 946 ~~ 947 (960)
..
T Consensus 96 ~~ 97 (112)
T 2ebu_A 96 RT 97 (112)
T ss_dssp HH
T ss_pred hh
Confidence 74
No 35
>2ep8_A Pescadillo homolog 1; A/B/A 3 layers, nucleolus, ribosome biogenesis, DNA damage, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=5.3e-09 Score=96.43 Aligned_cols=80 Identities=23% Similarity=0.373 Sum_probs=64.7
Q ss_pred HhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecc-----------cCCCccEEEecCCCCHHHHHHHhCCCcE
Q 002143 867 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKH-----------IDDQVTHVVANSLGTDKVNWALSTGRFV 935 (960)
Q Consensus 867 rqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssd-----------Vd~kVTHLVAss~gT~Kv~~Alk~GI~I 935 (960)
..+|+||++++++-.| +..|..+++.+||++..+ .+..+||+|+-++...+ +..+..+
T Consensus 10 ~~LF~g~~F~i~~e~p-------~~~le~~I~~~GG~v~~~~~~~~g~~~~~~~~~iTh~I~drp~~~~----~~~~r~~ 78 (100)
T 2ep8_A 10 KKLFEGLKFFLNREVP-------REALAFIIRSFGGEVSWDKSLCIGATYDVTDSRITHQIVDRPGQQT----SVIGRCY 78 (100)
T ss_dssp CCTTSSCEEECCSSSC-------HHHHHHHHHHTTCEEECCTTTSSCCCSCTTCTTCCEEECSCTTTSC----CBTTBEE
T ss_pred HHHcCCcEEEEecCCC-------HHHHHHHHHHcCCEEEeccccccCcccccCCCceEEEEecccchhh----hcCCCeE
Confidence 4589999999987433 456888899999999876 35789999998753322 2356799
Q ss_pred EcHHHHHHHHHhccCCCCCCCC
Q 002143 936 VHPGWVEASALLYRRANEQDFA 957 (960)
Q Consensus 936 VSpdWLedC~~~wkRvDEs~Yl 957 (960)
|.|+||+||+...+.++++.|.
T Consensus 79 VqPqWV~Dcin~~~lLp~~~Y~ 100 (100)
T 2ep8_A 79 VQPQWVFDSVNARLLLPVAEYF 100 (100)
T ss_dssp ECTHHHHHHHHHTSCCCTTTCC
T ss_pred EcchHHHHHHhcCCcCChhhcC
Confidence 9999999999999999999994
No 36
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=98.71 E-value=1.6e-08 Score=95.40 Aligned_cols=80 Identities=13% Similarity=0.060 Sum_probs=67.9
Q ss_pred hhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecC---CCCHHHHHHHhCCCcEEcHHHHH--
Q 002143 868 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANS---LGTDKVNWALSTGRFVVHPGWVE-- 942 (960)
Q Consensus 868 qILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss---~gT~Kv~~Alk~GI~IVSpdWLe-- 942 (960)
.+|.|++|||+|.+.. .+.++.++++.+||+|+..|+.++||||+.. ..+.|+.+|.+.||+||+.+||.
T Consensus 9 ~~l~G~~~ViTG~l~~-----~R~e~k~~ie~~Ggkv~~sVskkT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE~~l~~~ 83 (113)
T 2cok_A 9 KPLSNMKILTLGKLSR-----NKDEVKAMIEKLGGKLTGTANKASLCISTKKEVEKMNKKMEEVKEANIRVVSEDFLQDV 83 (113)
T ss_dssp CSSSSCEEEECSCCSS-----CHHHHHHHHHHTTCEEESCSTTCSEEECCHHHHHHCCHHHHHHHHTTCCEECTHHHHHH
T ss_pred CCcCCCEEEEEecCCC-----CHHHHHHHHHHCCCEEcCccccCccEEEECCCCCCCChHHHHHHHCCCcEEeHHHHHHH
Confidence 4699999999998743 3678999999999999999999999999984 36799999999999999999954
Q ss_pred --------HHHHhccCCC
Q 002143 943 --------ASALLYRRAN 952 (960)
Q Consensus 943 --------dC~~~wkRvD 952 (960)
+|+......+
T Consensus 84 ~~~~~~~~~~i~k~~i~~ 101 (113)
T 2cok_A 84 SASTKSLQELFLAHILSS 101 (113)
T ss_dssp HSCCSCHHHHHHHTBCSS
T ss_pred HhhchhHHHHHHHhcCCC
Confidence 5666555554
No 37
>2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=4e-08 Score=93.70 Aligned_cols=87 Identities=14% Similarity=0.077 Sum_probs=64.5
Q ss_pred hhhcCceeeeeecccCCCCCCCChh-HHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHh-------CCCcEEcHH
Q 002143 868 KILAGCRIVFSRVFPVGEANPHLHP-LWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALS-------TGRFVVHPG 939 (960)
Q Consensus 868 qILkGcvIvFSG~fP~~~~npe~~~-LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk-------~GI~IVSpd 939 (960)
..|+||+|+|-.. .. ...+.. +.+++..+||++..++++.|||||+.+...+.+..-++ .+.+||+..
T Consensus 19 ~~F~g~~iy~v~~---~~-g~~R~~~l~~l~r~~G~~V~~~ls~~VTHVVve~~~~~e~~~~l~~~~l~~~~~~~lv~i~ 94 (120)
T 2coe_A 19 IKFQDLVVFILEK---KM-GTTRRALLMELARRKGFRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVS 94 (120)
T ss_dssp CSCTTCEEEEECT---TT-CHHHHHHHHHHHHHHTCEECSSCCTTCCEEEESSCCHHHHHHHHHHCCCCCSSCCEEEEHH
T ss_pred cccCCeEEEEeec---cc-chHHHHHHHHHHHHcCCEEeeccCCCcCEEEecCCCHHHHHHHHhccccccccccEEeecH
Confidence 4799999998432 11 112233 45789999999999999999999997554433332222 257999999
Q ss_pred HHHHHHHhccCCCCCCCCC
Q 002143 940 WVEASALLYRRANEQDFAI 958 (960)
Q Consensus 940 WLedC~~~wkRvDEs~YlL 958 (960)
||.+|++.++.+||..|..
T Consensus 95 Wl~esmk~g~lv~ee~~~~ 113 (120)
T 2coe_A 95 WLIECIGAGKPVEMTGKHQ 113 (120)
T ss_dssp HHHHHHHTTSCCCCSSSSB
T ss_pred HHHHHHHcCCccCcccceE
Confidence 9999999999999977653
No 38
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=98.59 E-value=6.4e-09 Score=108.05 Aligned_cols=91 Identities=15% Similarity=0.104 Sum_probs=69.7
Q ss_pred HhhhcCceeee-eecccCCC-CCCCChhHHHHHHHhCCEEecccCCC-----ccEEEecCCCCHHHHHHHhCCCcEEcHH
Q 002143 867 RKILAGCRIVF-SRVFPVGE-ANPHLHPLWQTAEQFGAVCTKHIDDQ-----VTHVVANSLGTDKVNWALSTGRFVVHPG 939 (960)
Q Consensus 867 rqILkGcvIvF-SG~fP~~~-~npe~~~LwklAe~LGAtVssdVd~k-----VTHLVAss~gT~Kv~~Alk~GI~IVSpd 939 (960)
.++|+||+||+ +|.+.... ....+..|.+++.++||++....... .||+|+. ..|.|++.+.+.|++||+|+
T Consensus 3 s~lF~g~~f~v~~~~~~p~~~~~~~~~~L~~li~~~GG~~~~~~~~~t~~~~~~~iI~~-~~t~k~~~~~~~~~~vV~p~ 81 (264)
T 1z56_C 3 SNIFAGLLFYVLSDYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISC-KTTTECKALIDRGYDILHPN 81 (264)
T ss_dssp CCCCCTTCCCCSEEEECCCCCSSSSCCCTHHHHHHHHTTSCCCSSCCCCCSSCCEEEEC-SCCGGGGGGTTTTCCCBCSS
T ss_pred cccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHcCCEEeecCCCCccCccceEEEec-CCcHHHHHHHhCCCCEEech
Confidence 46899999976 77542100 11245689999999999987654433 3677775 46788888888889999999
Q ss_pred HHHHHHHhccCCCCCCCCC
Q 002143 940 WVEASALLYRRANEQDFAI 958 (960)
Q Consensus 940 WLedC~~~wkRvDEs~YlL 958 (960)
||++|+..++.++.+.|.+
T Consensus 82 Wv~dci~~~~llp~~~y~~ 100 (264)
T 1z56_C 82 WVLDCIAYKRLILIEPNYC 100 (264)
T ss_dssp TTHHHHSSCSCCCCCSCBS
T ss_pred HHHHHhhcCCCCCCChHHh
Confidence 9999999999999998854
No 39
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=98.55 E-value=6e-08 Score=98.12 Aligned_cols=91 Identities=19% Similarity=0.187 Sum_probs=62.9
Q ss_pred HHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCC-----CccEEEecCC----CCHHHHH-HHhCCCc
Q 002143 865 EQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDD-----QVTHVVANSL----GTDKVNW-ALSTGRF 934 (960)
Q Consensus 865 lRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~-----kVTHLVAss~----gT~Kv~~-Alk~GI~ 934 (960)
.+..+|.||.|+|.|-+. .+....|.++++..||++...+.. .+||+|+... ...+++. |.+.|++
T Consensus 113 ~~~~lF~g~~~~~~~~~~----~~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~~vvv~~~~~~~~~~~~~l~~~~~i~ 188 (229)
T 1l0b_A 113 SQEKLFEGLQIYCCEPFT----NMPKDELERMLQLCGASVVKELPLLTRDTGAHPIVLVQPSAWTEDNDCPDIGQLCKGR 188 (229)
T ss_dssp HC--CCTTCEEEECSCCS----SSCHHHHHHHHHHTTCEEECSSSCGGGCCSSCCEEEEC-------------------C
T ss_pred hhhhhhcCceEEEEecCC----CCCHHHHHHHHHHCCCEEeCCcccccccCCCceEEEEcCCccchhhhHHHHHHHcCCe
Confidence 356899999999987543 234678999999999999998865 3688655442 2345553 4567999
Q ss_pred EEcHHHHHHHHHhccCCCCCCCCCC
Q 002143 935 VVHPGWVEASALLYRRANEQDFAIK 959 (960)
Q Consensus 935 IVSpdWLedC~~~wkRvDEs~YlL~ 959 (960)
||+++||++|+..++.++|+.|+|.
T Consensus 189 iVs~~WlldsI~~~~~~~~~~Y~l~ 213 (229)
T 1l0b_A 189 LVMWDWVLDSISVYRCRDLDAYLVQ 213 (229)
T ss_dssp EEETHHHHHHHHTTSCCCGGGGBCC
T ss_pred EeehhHHHHHHhcCCcCCccceEcc
Confidence 9999999999999999999999875
No 40
>3pc7_A DNA ligase 3; DNA repair, BRCT domain, protein:protein interactions, XRCC1 domain, DNA binding protein; HET: DNA MSE; 1.65A {Homo sapiens} SCOP: c.15.1.2 PDB: 3pc8_C* 1imo_A* 1in1_A* 3qvg_A*
Probab=98.54 E-value=6.7e-08 Score=87.80 Aligned_cols=73 Identities=21% Similarity=0.257 Sum_probs=60.6
Q ss_pred hhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCC-CccEEEecCCCCHHHHHHHhCCCcEEcHHHHHHHHH
Q 002143 868 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDD-QVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASAL 946 (960)
Q Consensus 868 qILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~-kVTHLVAss~gT~Kv~~Alk~GI~IVSpdWLedC~~ 946 (960)
.+|.||++.+.+-++. ...|.+++.++||.+..+.+. +|||+|+... ...+..+|+|+||++|+.
T Consensus 15 diFsg~~~~l~~~v~~------~~~l~RyiiAfgG~v~~~~~~~~vTHvI~~~~--------~~~~~~~V~p~WI~dcI~ 80 (88)
T 3pc7_A 15 DIFTGVRLYLPPSTPD------FSRLRRYFVAFDGDLVQEFDMTSATHVLGSRD--------KNPAAQQVSPEWIWACIR 80 (88)
T ss_dssp CCSTTCEECCCTTSTT------HHHHHHHHHHTTCEECCGGGGGGCSEEESCCT--------TCTTSEEECHHHHHHHHH
T ss_pred hhhcCeEEEccCCcCc------hhhheeeeeecCCEEecccCCCcCeEEecCCC--------cCCCCcEEchHHHHHHHh
Confidence 4799999999775432 246889999999999888874 9999997663 367899999999999999
Q ss_pred hccCCCCC
Q 002143 947 LYRRANEQ 954 (960)
Q Consensus 947 ~wkRvDEs 954 (960)
+.+.++++
T Consensus 81 k~~Ll~~~ 88 (88)
T 3pc7_A 81 KRRLVAPS 88 (88)
T ss_dssp HTSCCSCC
T ss_pred CCcccCCC
Confidence 99998763
No 41
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=98.48 E-value=6.3e-08 Score=96.42 Aligned_cols=90 Identities=22% Similarity=0.227 Sum_probs=69.1
Q ss_pred HHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCC----c-cEEEecCCC----CHHHH-HHHhCCCcE
Q 002143 866 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQ----V-THVVANSLG----TDKVN-WALSTGRFV 935 (960)
Q Consensus 866 RrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~k----V-THLVAss~g----T~Kv~-~Alk~GI~I 935 (960)
+.++|+|+.|||+|-+. .+.+..|..+++.+||++..++... . +|+|+.... ..|++ .|.+.|++|
T Consensus 112 ~~~lF~g~~~~~~~~~~----~~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~ivi~~~~~~~~~~~~~~~a~~~~~~i 187 (214)
T 1t15_A 112 DRKIFRGLEICCYGPFT----NMPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGFHAIGQMCEAPV 187 (214)
T ss_dssp TSCTTTTCEEEECSCCS----SSCHHHHHHHHHHTTCEECCSGGGCCCSTTCCEEEEECGGGCSSCGGGGSSTTTCSSCE
T ss_pred CCcccCCCEEEEEecCC----CCCHHHHHHHHHHCCCEEecCccccccCCCCccEEEECCCcccchhhHHHHHHhcCCcE
Confidence 45699999999988543 2346789999999999999988652 2 345554321 22443 456789999
Q ss_pred EcHHHHHHHHHhccCCCCCCCCCC
Q 002143 936 VHPGWVEASALLYRRANEQDFAIK 959 (960)
Q Consensus 936 VSpdWLedC~~~wkRvDEs~YlL~ 959 (960)
|+++||.+|+..++.++++.|++.
T Consensus 188 V~~~Wi~dsi~~~~~l~~~~Y~l~ 211 (214)
T 1t15_A 188 VTREWVLDSVALYQCQELDTYLIP 211 (214)
T ss_dssp EEHHHHHHHHHHTSCCCSGGGBCC
T ss_pred EeccHHHHhHhhcCcCCCcceeec
Confidence 999999999999999999999874
No 42
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=98.39 E-value=1.4e-07 Score=95.50 Aligned_cols=82 Identities=13% Similarity=0.172 Sum_probs=65.8
Q ss_pred HHhhhcCce-eeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHhCCCcEEcHHHHHHH
Q 002143 866 QRKILAGCR-IVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEAS 944 (960)
Q Consensus 866 RrqILkGcv-IvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk~GI~IVSpdWLedC 944 (960)
+.++|+|+. +|++++. ++.+..|..+++..||+|..++. .++++|+.... ++..++++|+|+||+||
T Consensus 116 ~~~LF~g~~~~~v~~~~-----~~~~~~L~~lI~~~GG~v~~~~~-~~~iiI~~~~~------~~~~~~~~V~p~Wi~Ds 183 (199)
T 3u3z_A 116 RGTLFADQPVMFVSPAS-----SPPVAKLCELVHLCGGRVSQVPR-QASIVIGPYSG------KKKATVKYLSEKWVLDS 183 (199)
T ss_dssp CCCTTTTSCCEEECTTC-----SSCHHHHHHHHHHTTCCBCSSGG-GCSEEESCCCS------CCCTTCEEECHHHHHHH
T ss_pred cchhhCCCeEEEECCCC-----CCCHHHHHHHHHHcCCEEeccCC-CCEEEEeCCch------hccCCCcEEChhHHHHH
Confidence 568999995 5556542 34567899999999999999884 56777765332 34678999999999999
Q ss_pred HHhccCCCCCCCCCC
Q 002143 945 ALLYRRANEQDFAIK 959 (960)
Q Consensus 945 ~~~wkRvDEs~YlL~ 959 (960)
+..++.+++++|++.
T Consensus 184 I~~~~llp~~~Y~~~ 198 (199)
T 3u3z_A 184 ITQHKVCAPENYLLS 198 (199)
T ss_dssp HHHTSCCCGGGGBCC
T ss_pred HHcCCcCChHhccCC
Confidence 999999999999874
No 43
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=98.17 E-value=2.6e-06 Score=86.27 Aligned_cols=88 Identities=17% Similarity=0.261 Sum_probs=69.7
Q ss_pred HhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCc--cEEEecC-CCCHHHHHHHhCCCcEEcHHHHHH
Q 002143 867 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQV--THVVANS-LGTDKVNWALSTGRFVVHPGWVEA 943 (960)
Q Consensus 867 rqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kV--THLVAss-~gT~Kv~~Alk~GI~IVSpdWLed 943 (960)
+.+|.|+.|++++.+. +....+.++++..||+|........ +|+|... ....++..+.+.|++||+++||++
T Consensus 113 ~~lF~g~~~~~~~~~~-----~~~~~l~~li~~~GG~v~~~~~~~~~~~~ivI~~~~d~~~~~~~~~~~i~vvs~eWi~~ 187 (209)
T 2etx_A 113 RRLLEGYEIYVTPGVQ-----PPPPQMGEIISCCGGTYLPSMPRSYKPQRVVITCPQDFPHCSIPLRVGLPLLSPEFLLT 187 (209)
T ss_dssp SCTTTTCEEEECTTCS-----SCHHHHHHHHHHTTCEECSSCCCSCCTTEEEECCGGGGGGCHHHHHHTCCEECTHHHHH
T ss_pred CCCcCCcEEEEeCCCC-----CCHHHHHHHHHHCCCEEECCCCCCCCCceEEEECcccHHHHHHHHHCCCeEEcHHHHHH
Confidence 4799999999987532 3456788999999999998887542 6777653 334466678889999999999999
Q ss_pred HHHhccCCCCCCCCCCC
Q 002143 944 SALLYRRANEQDFAIKP 960 (960)
Q Consensus 944 C~~~wkRvDEs~YlL~p 960 (960)
|+...+ ++++.|.|.+
T Consensus 188 sI~~q~-ld~e~y~l~~ 203 (209)
T 2etx_A 188 GVLKQE-AKPEAFVLSP 203 (209)
T ss_dssp HHHHTC-CCGGGGBCCT
T ss_pred HHHhcc-cChHHheecC
Confidence 999855 6999998864
No 44
>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*
Probab=98.09 E-value=3.3e-06 Score=81.88 Aligned_cols=87 Identities=16% Similarity=0.145 Sum_probs=64.1
Q ss_pred hhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHH-HH------H---hCCCcEEcH
Q 002143 869 ILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVN-WA------L---STGRFVVHP 938 (960)
Q Consensus 869 ILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~-~A------l---k~GI~IVSp 938 (960)
.|.||+|.+-+. -.+ .-.+.-|.++|.+.|+.+...+.+.|||+|+-+...+-+. |- + ..+.++|+.
T Consensus 10 ~F~~v~iyive~-kmG--~sRr~fL~~la~~kGf~v~~~~S~~VTHVV~E~~s~~~~~~~L~~~~~~l~~~~~~~~lLdi 86 (133)
T 2dun_A 10 RFPGVAIYLVEP-RMG--RSRRAFLTGLARSKGFRVLDACSSEATHVVMEETSAEEAVSWQERRMAAAPPGCTPPALLDI 86 (133)
T ss_dssp SEEEEEEEECHH-HHC--SHHHHHHHHHHHHHTEEECSSCCTTCCEEEESSCCHHHHHHHHHHHHHHSCTTCCCCEEEEH
T ss_pred ccCccEEEEecC-CcC--HHHHHHHHHHHHhcCCEeccccCCCceEEEecCCCHHHHHHHHHHhhcccCcCCCCcEEecc
Confidence 588999887653 111 1122347789999999999999999999999654443322 11 1 145799999
Q ss_pred HHHHHHHHhccCCCCCCCCC
Q 002143 939 GWVEASALLYRRANEQDFAI 958 (960)
Q Consensus 939 dWLedC~~~wkRvDEs~YlL 958 (960)
.||.+|++.++.++|+.|.+
T Consensus 87 sWltecm~~g~pV~~e~~~~ 106 (133)
T 2dun_A 87 SWLTESLGAGQPVPVECRHR 106 (133)
T ss_dssp HHHHHHHHHTSCCCCCTTTS
T ss_pred HHHHHHHhcCCcCCcccceE
Confidence 99999999999999976643
No 45
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=98.07 E-value=3.1e-06 Score=88.94 Aligned_cols=86 Identities=16% Similarity=0.166 Sum_probs=65.0
Q ss_pred HHhhhcCceeeeeecccCCCCCCCChhHH-HHHHHhCCEEecccC---------CCccEEEecCC--CCHHHHHHHhCCC
Q 002143 866 QRKILAGCRIVFSRVFPVGEANPHLHPLW-QTAEQFGAVCTKHID---------DQVTHVVANSL--GTDKVNWALSTGR 933 (960)
Q Consensus 866 RrqILkGcvIvFSG~fP~~~~npe~~~Lw-klAe~LGAtVssdVd---------~kVTHLVAss~--gT~Kv~~Alk~GI 933 (960)
+..+|+|+.|++++.... ....+| .+++.+||++...+. ...+|+|..+. ...+++.|.++|+
T Consensus 152 ~~~LF~G~~I~i~~~~~~-----~~~~~~~~Il~~~Ga~vv~~~~s~~~~~d~~~~~~~viv~d~~~~~~~~~~a~~~~i 226 (259)
T 1kzy_C 152 RENPFQNLKVLLVSDQQQ-----NFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQL 226 (259)
T ss_dssp CCCTTTTCEEEEEESCTT-----TTHHHHHHHHHHTTCSEEEEEESSSSCCCSCGGGCSEEEECTTCCHHHHHHHHHHTC
T ss_pred cCCCCCCeEEEEecCCCC-----CHHHHHHHHHHhcCCEEEeccccchhhhhccCCCCeEEEECCCChHHHHHHHHhcCC
Confidence 367999999999885321 223445 488999999876663 24566665542 2466778899999
Q ss_pred cEEcHHHHHHHHHhccCCCCCCC
Q 002143 934 FVVHPGWVEASALLYRRANEQDF 956 (960)
Q Consensus 934 ~IVSpdWLedC~~~wkRvDEs~Y 956 (960)
+||+.+||.+|+..++.+++..+
T Consensus 227 ~iVs~EWv~~sI~~~~ll~~~~h 249 (259)
T 1kzy_C 227 PVVSQEWVIQCLIVGERIGFKQH 249 (259)
T ss_dssp CEECHHHHHHHHHHTSCCCTTSS
T ss_pred CEecHHHHHHHHHhCCcCCCCcC
Confidence 99999999999999999998865
No 46
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=97.96 E-value=3.1e-06 Score=85.06 Aligned_cols=84 Identities=10% Similarity=0.080 Sum_probs=63.7
Q ss_pred HHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEeccc-----------------------CCCccEEEecCCCC
Q 002143 866 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHI-----------------------DDQVTHVVANSLGT 922 (960)
Q Consensus 866 RrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdV-----------------------d~kVTHLVAss~gT 922 (960)
+..+|.||.++++|-+. .+.+..|.++++..||++.... ++.|||+|....+.
T Consensus 101 ~~~lF~g~~~~l~~~~~----~~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~~t~~iv~~~~~ 176 (210)
T 2nte_A 101 LPKLFDGCYFYLWGTFK----HHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLC 176 (210)
T ss_dssp CCCTTTTCEEEECSCCS----SSCHHHHHHHHHHTTCEEESSCCCGGGCGGGSSCCCCTTSCTTCGGGTCCEEEEECSCS
T ss_pred cccccCceEEEEeccCC----CCCHHHHHHHHHHCCCEEEecCCCCccccccccceeeeccCCCcccccceEEEEecccc
Confidence 35799999999998442 2446789999999999998521 14579999877542
Q ss_pred HHH--HHHHhCCCcEEcHHHHHHHHHhccCCCCC
Q 002143 923 DKV--NWALSTGRFVVHPGWVEASALLYRRANEQ 954 (960)
Q Consensus 923 ~Kv--~~Alk~GI~IVSpdWLedC~~~wkRvDEs 954 (960)
|+ ..|...++++|+++||+||+..++.++..
T Consensus 177 -~~~~~~~~~~~v~~V~~~Wl~dcI~~~~llp~~ 209 (210)
T 2nte_A 177 -NYHPERVRQGKVWKAPSSWFIDCVMSFELLPLD 209 (210)
T ss_dssp -SCCCSCSEETTEEEEEHHHHHHHHHHTSCCCSC
T ss_pred -ccCHHHHhccCcccccHHHHHHHHHhCeeccCC
Confidence 22 22445678999999999999999998864
No 47
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=97.92 E-value=2.2e-06 Score=101.13 Aligned_cols=76 Identities=14% Similarity=0.084 Sum_probs=0.0
Q ss_pred HhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHhCCCcEEcHHHHHHHHH
Q 002143 867 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASAL 946 (960)
Q Consensus 867 rqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk~GI~IVSpdWLedC~~ 946 (960)
...|.|.++||||.+.. .+.++.++++.+||+++..++.++++||+....+.|+.+|.+.||+||+.+|+.+++.
T Consensus 585 ~~~l~G~~~v~TG~l~~-----~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~gsKl~KA~~lgI~Ii~E~~f~~~l~ 659 (667)
T 1dgs_A 585 SDLLSGLTFVLTGELSR-----PREEVKALLGRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVAVLTEEEFWRFLK 659 (667)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCEEEEeCCCCC-----CHHHHHHHHHHcCCEEcCcccCCeeEEEECCCCChHHHHHHHCCCeEEeHHHHHHHHh
Confidence 35699999999998854 3567889999999999999999999999998777999999999999999999999886
Q ss_pred h
Q 002143 947 L 947 (960)
Q Consensus 947 ~ 947 (960)
.
T Consensus 660 ~ 660 (667)
T 1dgs_A 660 E 660 (667)
T ss_dssp -
T ss_pred c
Confidence 4
No 48
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=97.86 E-value=3.6e-06 Score=99.38 Aligned_cols=76 Identities=14% Similarity=0.073 Sum_probs=0.0
Q ss_pred HhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHhCCCcEEcHHHHHHHHH
Q 002143 867 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASAL 946 (960)
Q Consensus 867 rqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk~GI~IVSpdWLedC~~ 946 (960)
...|.|.++||||.++.. .+.++.++++.+||+++..++.++++||+....+.|+.+|.+.||+|++.+|+.+++.
T Consensus 595 ~~~l~G~~~v~TG~l~~~----~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~gsKl~KA~~lgI~Ii~E~~f~~~l~ 670 (671)
T 2owo_A 595 DSPFAGKTVVLTGSLSQM----SRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLG 670 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccCcEEEEcCCCCCC----CHHHHHHHHHHcCCEEeCcccCceeEEEECCCCChHHHHHHHCCCcEEcHHHHHHHhc
Confidence 356999999999988642 3567889999999999999999999999998777999999999999999999998763
No 49
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.51 E-value=9.4e-05 Score=71.64 Aligned_cols=80 Identities=20% Similarity=0.189 Sum_probs=56.4
Q ss_pred EEeeccCHHHHHHHhhcc-eEEEEEcCCc-HHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCC
Q 002143 698 WTKLRPGIWTFLERASKL-FEMHLYTMGN-KLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM 775 (960)
Q Consensus 698 yVkLRPgL~EFLeeLSk~-YEIvIyTAgt-reYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGr 775 (960)
.+.+.|++.++|+++.+. +.++|.|++. +.++..+++.++-.. +|...++. . +. + ...+.+-++ .+|.
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~-~f~~~~~~-~--~~--k---~~~~~~~~~-~~~~ 135 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR-YFVHREIY-P--GS--K---ITHFERLQQ-KTGI 135 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT-TEEEEEES-S--SC--H---HHHHHHHHH-HHCC
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh-hcceeEEE-e--Cc--h---HHHHHHHHH-HcCC
Confidence 467899999999999875 9999999999 799999999987765 56642221 1 10 0 001222222 4576
Q ss_pred C-CcEEEEcCCCC
Q 002143 776 E-SAVVIIDDSVR 787 (960)
Q Consensus 776 d-s~VVIVDDsp~ 787 (960)
+ +.+|+|+|+..
T Consensus 136 ~~~~~~~igD~~~ 148 (187)
T 2wm8_A 136 PFSQMIFFDDERR 148 (187)
T ss_dssp CGGGEEEEESCHH
T ss_pred ChHHEEEEeCCcc
Confidence 6 88999999963
No 50
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=97.47 E-value=0.00013 Score=70.05 Aligned_cols=86 Identities=15% Similarity=0.202 Sum_probs=60.1
Q ss_pred EEEeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceee-eeeeecCCCCCCCCCCCCCCccccCCcccC
Q 002143 697 MWTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA-GRVISRGDDGDPFDGDERVPKSKDLEGVLG 774 (960)
Q Consensus 697 ~yVkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~-~RIySRddc~~~~dGder~~yiKDLsrVLG 774 (960)
..+.+.|++.++|+++.+. |.++|+|++...++..+++.++-.. +|. ..+++.+. . ..+.. . ..++-+-..+|
T Consensus 67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~i~~~~~-~-~~kp~-~-~~~~~~~~~~g 141 (205)
T 3m9l_A 67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLAD-CFAEADVLGRDE-A-PPKPH-P-GGLLKLAEAWD 141 (205)
T ss_dssp EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GSCGGGEECTTT-S-CCTTS-S-HHHHHHHHHTT
T ss_pred hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchh-hcCcceEEeCCC-C-CCCCC-H-HHHHHHHHHcC
Confidence 3578899999999999876 9999999999999999999887654 563 34665442 1 11110 0 12222323467
Q ss_pred CC-CcEEEEcCCCC
Q 002143 775 ME-SAVVIIDDSVR 787 (960)
Q Consensus 775 rd-s~VVIVDDsp~ 787 (960)
.+ +.+|+|+|+..
T Consensus 142 ~~~~~~i~iGD~~~ 155 (205)
T 3m9l_A 142 VSPSRMVMVGDYRF 155 (205)
T ss_dssp CCGGGEEEEESSHH
T ss_pred CCHHHEEEECCCHH
Confidence 76 89999999973
No 51
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=97.41 E-value=0.00028 Score=72.51 Aligned_cols=88 Identities=9% Similarity=0.057 Sum_probs=68.0
Q ss_pred HHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCC-------------CccEEEecCCCCHHHHHHHhCC
Q 002143 866 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDD-------------QVTHVVANSLGTDKVNWALSTG 932 (960)
Q Consensus 866 RrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~-------------kVTHLVAss~gT~Kv~~Alk~G 932 (960)
+.++|+|+.|++++-+. +....+.++++..||+|...+.. ....||+.......+..+.+.|
T Consensus 119 ~~~LF~G~~f~it~~~~-----~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~~~~~~ivis~~~d~~~~~~~~~~~ 193 (219)
T 3sqd_A 119 VSPLFKAKYFYITPGIC-----PSLSTMKAIVECAGGKVLSKQPSFRKLMEHKQNSSLSEIILISCENDLHLCREYFARG 193 (219)
T ss_dssp HSCTTTTEEEEECTTCS-----SCHHHHHHHHHHTTCEEESSCCCHHHHHHHHHCTTSCEEEEEECGGGGGGGHHHHHTT
T ss_pred cccccCCcEEEEeCCCC-----CCHHHHHHHHHHCCCEEECCCCchHHhhhhhcccCCCCEEEEecccHHHHHHHHHHCC
Confidence 67799999999998542 33567899999999999988743 1244555555666778888899
Q ss_pred CcEEcHHHHHHHHHhccCCCCCCCCCC
Q 002143 933 RFVVHPGWVEASALLYRRANEQDFAIK 959 (960)
Q Consensus 933 I~IVSpdWLedC~~~wkRvDEs~YlL~ 959 (960)
++|++.+||.+|+.+ ..+|-+.|.++
T Consensus 194 ~~v~s~E~il~~Il~-q~ld~~~~~~~ 219 (219)
T 3sqd_A 194 IDVHNAEFVLTGVLT-QTLDYESYKFN 219 (219)
T ss_dssp CCCEETHHHHHHHHH-TCCCTTTSBCC
T ss_pred CcEEeHHHHHHHHHh-eeecchhcccC
Confidence 999999999999995 45577777653
No 52
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=97.36 E-value=0.00022 Score=69.36 Aligned_cols=83 Identities=13% Similarity=0.156 Sum_probs=57.4
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcH---HHHHHHHHHhcCCCceeeeeeeecCCCC---CCCCCCCCCCccccCCc
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNK---LYATEMAKVLDPKGVLFAGRVISRGDDG---DPFDGDERVPKSKDLEG 771 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtr---eYAd~VLdiLDP~g~lF~~RIySRddc~---~~~dGder~~yiKDLsr 771 (960)
+.+.||+.++|++|.+. |.++|.|++.. .++..+++.++-.. +|.. +++.++.. ...+.+ ...+.+=+.
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~-~fd~-i~~~~~~~~~~~~~KP~-p~~~~~~~~- 108 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID-YFDF-IYASNSELQPGKMEKPD-KTIFDFTLN- 108 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG-GEEE-EEECCTTSSTTCCCTTS-HHHHHHHHH-
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh-heEE-EEEccccccccCCCCcC-HHHHHHHHH-
Confidence 55899999999999876 99999999887 89999999888765 6765 66554321 111110 001222233
Q ss_pred ccCCC-CcEEEEcCC
Q 002143 772 VLGME-SAVVIIDDS 785 (960)
Q Consensus 772 VLGrd-s~VVIVDDs 785 (960)
.+|.+ +.+|+|+|+
T Consensus 109 ~~~~~~~~~l~VGD~ 123 (189)
T 3ib6_A 109 ALQIDKTEAVMVGNT 123 (189)
T ss_dssp HHTCCGGGEEEEESB
T ss_pred HcCCCcccEEEECCC
Confidence 35766 889999999
No 53
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=97.35 E-value=0.0007 Score=65.70 Aligned_cols=113 Identities=14% Similarity=0.115 Sum_probs=68.8
Q ss_pred hcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhcc-eEEEE
Q 002143 642 FSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKL-FEMHL 720 (960)
Q Consensus 642 ls~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk~-YEIvI 720 (960)
.....++++||+|+||+...... ++. . ..-.+.+.|++.++|++|.+. |.++|
T Consensus 10 ~~~~~k~~~~D~Dgtl~~~~~~~--------~~~-----------------~-~~~~~~~~pg~~e~L~~L~~~G~~l~i 63 (176)
T 2fpr_A 10 HGSSQKYLFIDRDGTLISEPPSD--------FQV-----------------D-RFDKLAFEPGVIPQLLKLQKAGYKLVM 63 (176)
T ss_dssp ---CCEEEEECSBTTTBCCC--C--------CCC-----------------C-SGGGCCBCTTHHHHHHHHHHTTEEEEE
T ss_pred cCCcCcEEEEeCCCCeEcCCCCC--------cCc-----------------C-CHHHCcCCccHHHHHHHHHHCCCEEEE
Confidence 34677899999999999763100 000 0 000245789999999999875 99999
Q ss_pred EcCC---------------cHHHHHHHHHHhcCCCceeeeeeee----cCCCCCCCCCCCCCCccccCCcccCCC-CcEE
Q 002143 721 YTMG---------------NKLYATEMAKVLDPKGVLFAGRVIS----RGDDGDPFDGDERVPKSKDLEGVLGME-SAVV 780 (960)
Q Consensus 721 yTAg---------------treYAd~VLdiLDP~g~lF~~RIyS----Rddc~~~~dGder~~yiKDLsrVLGrd-s~VV 780 (960)
.|++ ...++..+++.++-. |..-+++ .+++. ..+.+ ...+.+=++ .+|.+ +.+|
T Consensus 64 ~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~-~~KP~-p~~~~~~~~-~~gi~~~~~l 137 (176)
T 2fpr_A 64 ITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECD-CRKPK-VKLVERYLA-EQAMDRANSY 137 (176)
T ss_dssp EEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCS-SSTTS-CGGGGGGC-----CCGGGCE
T ss_pred EECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCccccc-ccCCC-HHHHHHHHH-HcCCCHHHEE
Confidence 9999 678888888887654 6543344 12222 11111 112333333 45666 8899
Q ss_pred EEcCCC
Q 002143 781 IIDDSV 786 (960)
Q Consensus 781 IVDDsp 786 (960)
+|+|+.
T Consensus 138 ~VGD~~ 143 (176)
T 2fpr_A 138 VIGDRA 143 (176)
T ss_dssp EEESSH
T ss_pred EEcCCH
Confidence 999997
No 54
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=97.25 E-value=5e-05 Score=68.03 Aligned_cols=83 Identities=14% Similarity=0.163 Sum_probs=54.7
Q ss_pred eccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-Cc
Q 002143 701 LRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SA 778 (960)
Q Consensus 701 LRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~ 778 (960)
+.|++.++|+++.+. +.++|.|++...++..+++.++-.. +|.. +++.+++.. .+.+ ...+.+=++ .+|.+ +.
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~-i~~~~~~~~-~Kp~-~~~~~~~~~-~~~~~~~~ 93 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNG-VVDK-VLLSGELGV-EKPE-EAAFQAAAD-AIDLPMRD 93 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTT-SSSE-EEEHHHHSC-CTTS-HHHHHHHHH-HTTCCGGG
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHh-hccE-EEEeccCCC-CCCC-HHHHHHHHH-HcCCCccc
Confidence 468899999999876 9999999999999999998876443 5654 554332211 1110 001222222 34655 78
Q ss_pred EEEEcCCCCc
Q 002143 779 VVIIDDSVRV 788 (960)
Q Consensus 779 VVIVDDsp~v 788 (960)
+++|+|+..-
T Consensus 94 ~~~vgD~~~d 103 (137)
T 2pr7_A 94 CVLVDDSILN 103 (137)
T ss_dssp EEEEESCHHH
T ss_pred EEEEcCCHHH
Confidence 9999999753
No 55
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=97.23 E-value=0.00024 Score=74.07 Aligned_cols=81 Identities=16% Similarity=0.130 Sum_probs=58.3
Q ss_pred HHHhhhcCceeeeeecccCCCCCCC-----------ChhHHHHHHHhCCEE--ecccCCCccEEEecCCCCHHHHHHHhC
Q 002143 865 EQRKILAGCRIVFSRVFPVGEANPH-----------LHPLWQTAEQFGAVC--TKHIDDQVTHVVANSLGTDKVNWALST 931 (960)
Q Consensus 865 lRrqILkGcvIvFSG~fP~~~~npe-----------~~~LwklAe~LGAtV--ssdVd~kVTHLVAss~gT~Kv~~Alk~ 931 (960)
-+..+|.|++|++..-.. ..+. ...+..+++.+||++ ..+++...+|+|....+. .|.++
T Consensus 147 ~~~~Lf~g~~i~~~~~~~---~~~~~~~~~~~~g~~~~~~~~i~~~~Ga~~~~v~~~~~~~~d~v~~~~~~----~~~~~ 219 (241)
T 2vxb_A 147 ARKGPLFGKKILFIIPEA---KSWQKKIENTEQGQKALAHVYHALALGADVEIRPNVAHLECDLILTMDGN----IVDET 219 (241)
T ss_dssp HCCCTTTTCEEEECCCC---------------CHHHHHHHHHHHHHTTCEEECCSCCSSCCCSEEECSSSC----CCSSC
T ss_pred hcCcCCCCcEEEEEeCCC---cccccccccccccchHHHHHHHHHHcCCceecccccccCCccEEEECCcc----ccccC
Confidence 356799999998863110 0110 123445789999999 666666788998875432 25678
Q ss_pred CCcEEcHHHHHHHHHhccCCC
Q 002143 932 GRFVVHPGWVEASALLYRRAN 952 (960)
Q Consensus 932 GI~IVSpdWLedC~~~wkRvD 952 (960)
+++||+++||.+|+..++++|
T Consensus 220 ~~~iV~~eWv~~~i~~g~~l~ 240 (241)
T 2vxb_A 220 NCPVVDPEWIVECLISQSDIS 240 (241)
T ss_dssp SSCEECHHHHHHHHHHTSCTT
T ss_pred CCCEecHHHHHHHHHhceecC
Confidence 999999999999999999886
No 56
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=97.17 E-value=0.00029 Score=67.52 Aligned_cols=88 Identities=14% Similarity=0.240 Sum_probs=57.4
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCC------CCCCCCCCCCCccccCCc
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDD------GDPFDGDERVPKSKDLEG 771 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc------~~~~dGder~~yiKDLsr 771 (960)
+.++|++.++|+.+.+. |.++|+|++...++..+++.++-.. +|...+...+.. .....+......++-+..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~ 152 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDA-AFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQR 152 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcch-hccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHH
Confidence 56899999999999987 9999999999999999999987654 677543211100 000001000001122222
Q ss_pred ccCCC-CcEEEEcCCCC
Q 002143 772 VLGME-SAVVIIDDSVR 787 (960)
Q Consensus 772 VLGrd-s~VVIVDDsp~ 787 (960)
.+|.+ +.+|.|+|+..
T Consensus 153 ~~g~~~~~~i~vGDs~~ 169 (217)
T 3m1y_A 153 LLNISKTNTLVVGDGAN 169 (217)
T ss_dssp HHTCCSTTEEEEECSGG
T ss_pred HcCCCHhHEEEEeCCHH
Confidence 35666 78999999974
No 57
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=97.11 E-value=0.00067 Score=65.82 Aligned_cols=85 Identities=19% Similarity=0.195 Sum_probs=59.2
Q ss_pred EEeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC
Q 002143 698 WTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 776 (960)
Q Consensus 698 yVkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd 776 (960)
.+...|++.++|+++.+. |.++|+|++...++..+++.+.-.. +|.. +++.+++.. .+.. . ..++.+-..+|.+
T Consensus 101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~-i~~~~~~~~-~Kp~-~-~~~~~~~~~lgi~ 175 (231)
T 3kzx_A 101 NFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTH-YFDS-IIGSGDTGT-IKPS-P-EPVLAALTNINIE 175 (231)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSE-EEEETSSSC-CTTS-S-HHHHHHHHHHTCC
T ss_pred cceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchh-heee-EEcccccCC-CCCC-h-HHHHHHHHHcCCC
Confidence 367899999999999876 9999999999999999999887654 5664 555443321 1110 0 1122222245766
Q ss_pred -C-cEEEEcCCCC
Q 002143 777 -S-AVVIIDDSVR 787 (960)
Q Consensus 777 -s-~VVIVDDsp~ 787 (960)
+ .+|+|+|+..
T Consensus 176 ~~~~~v~vGD~~~ 188 (231)
T 3kzx_A 176 PSKEVFFIGDSIS 188 (231)
T ss_dssp CSTTEEEEESSHH
T ss_pred cccCEEEEcCCHH
Confidence 6 8999999974
No 58
>3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A
Probab=97.11 E-value=0.00085 Score=71.20 Aligned_cols=100 Identities=20% Similarity=0.200 Sum_probs=70.7
Q ss_pred chhHHHHHHHHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCC--CccEEEecC-CCCHHHHHHHhCC
Q 002143 856 VDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDD--QVTHVVANS-LGTDKVNWALSTG 932 (960)
Q Consensus 856 ~DVR~ILkelRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~--kVTHLVAss-~gT~Kv~~Alk~G 932 (960)
.+++.||..+-...--..+++.||.-... -+ ..=.+..+.+|-.+..+++. .|+||+|.+ .+|+|+..|+..+
T Consensus 6 ~~a~~il~~~~~~~~~~i~ai~TGc~~~~---~~-~~D~~~Lr~LGI~Iv~d~~~~~~~n~LiAPkilRT~KFL~sLa~~ 81 (256)
T 3t7k_A 6 TKAEKILARFNELPNYDLKAVCTGCFHDG---FN-EVDIEILNQLGIKIFDNIKETDKLNCIFAPKILRTEKFLKSLSFE 81 (256)
T ss_dssp -CHHHHHHTCSCCCCCCEEEEESSSCSSC---CC-HHHHHHHHHTTEEECSSCCGGGCCCEEECSSCCCBHHHHHHTTST
T ss_pred HHHHHHHHhcccCCCeeEEEEecCCcccc---cC-HHHHHHHHHcCeEEEecCcccCCCCEEEcCchhhHHHHHHHhccC
Confidence 35666665332222245566777763111 11 12235678999999999974 899999987 7999999999997
Q ss_pred C--cEEcHHHHHHHHHh---cc------CCCCCCCCCC
Q 002143 933 R--FVVHPGWVEASALL---YR------RANEQDFAIK 959 (960)
Q Consensus 933 I--~IVSpdWLedC~~~---wk------RvDEs~YlL~ 959 (960)
- +||+|+||.+|++. ++ .++.++|.+.
T Consensus 82 P~~~il~p~FI~~~Lk~ih~~~~~~~~~~l~~~dY~L~ 119 (256)
T 3t7k_A 82 PLKFALKPEFIIDLLKQIHSKKDKLSQININLFDYEIN 119 (256)
T ss_dssp TCCEEECTHHHHHHHHHHC-------CCCCCSSTTBCT
T ss_pred ccceEeCHHHHHHHHHHhhcCCcccccccCChhhccCC
Confidence 5 59999999999998 66 7888889763
No 59
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=97.05 E-value=0.00037 Score=65.61 Aligned_cols=84 Identities=21% Similarity=0.141 Sum_probs=59.0
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+...|++.++|+++.+. +.++|+|++...++..+++.+.-.. +|.. +++.+++.. .+.. . ...+.+-..+|.+
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~ 157 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YFDV-MVFGDQVKN-GKPD-P-EIYLLVLERLNVVP 157 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSE-EECGGGSSS-CTTS-T-HHHHHHHHHHTCCG
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHH-hcCE-EeecccCCC-CCcC-c-HHHHHHHHHcCCCC
Confidence 67899999999999876 9999999999999999999887654 5764 444443221 1110 0 1122222245766
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|+|+|+..
T Consensus 158 ~~~i~iGD~~~ 168 (216)
T 2pib_A 158 EKVVVFEDSKS 168 (216)
T ss_dssp GGEEEEECSHH
T ss_pred ceEEEEeCcHH
Confidence 88999999963
No 60
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=97.01 E-value=0.00075 Score=64.06 Aligned_cols=106 Identities=11% Similarity=-0.012 Sum_probs=65.0
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhcc-eEEEEEcCCc
Q 002143 647 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKL-FEMHLYTMGN 725 (960)
Q Consensus 647 LTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk~-YEIvIyTAgt 725 (960)
+.++||+|+||+..... .+.. + -.+.+.|++.++|++|.+. |.++|.|++.
T Consensus 2 k~v~~D~DGtL~~~~~~-~~~~----~-----------------------~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~ 53 (179)
T 3l8h_A 2 KLIILDRDGVVNQDSDA-FVKS----P-----------------------DEWIALPGSLQAIARLTQADWTVVLATNQS 53 (179)
T ss_dssp CEEEECSBTTTBCCCTT-CCCS----G-----------------------GGCCBCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred CEEEEcCCCccccCCCc-cCCC----H-----------------------HHceECcCHHHHHHHHHHCCCEEEEEECCC
Confidence 46899999999976410 0000 0 0134689999999999876 9999999998
Q ss_pred H---------------HHHHHHHHHhcCCCceeeeeeee----cCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCC
Q 002143 726 K---------------LYATEMAKVLDPKGVLFAGRVIS----RGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 785 (960)
Q Consensus 726 r---------------eYAd~VLdiLDP~g~lF~~RIyS----Rddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDs 785 (960)
. .++..+++.+. .+|...+++ .+++. ..+.. ...+.+=++ .+|.+ +.+|+|+|+
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~-~~KP~-~~~~~~~~~-~~~~~~~~~~~vGD~ 127 (179)
T 3l8h_A 54 GLARGLFDTATLNAIHDKMHRALAQMG---GVVDAIFMCPHGPDDGCA-CRKPL-PGMYRDIAR-RYDVDLAGVPAVGDS 127 (179)
T ss_dssp TTTTTSSCHHHHHHHHHHHHHHHHHTT---CCCCEEEEECCCTTSCCS-SSTTS-SHHHHHHHH-HHTCCCTTCEEEESS
T ss_pred ccccCcCCHHHHHHHHHHHHHHHHhCC---CceeEEEEcCCCCCCCCC-CCCCC-HHHHHHHHH-HcCCCHHHEEEECCC
Confidence 7 67777777766 345432221 12221 11110 011222232 35766 889999998
Q ss_pred C
Q 002143 786 V 786 (960)
Q Consensus 786 p 786 (960)
.
T Consensus 128 ~ 128 (179)
T 3l8h_A 128 L 128 (179)
T ss_dssp H
T ss_pred H
Confidence 6
No 61
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=96.98 E-value=0.00085 Score=66.57 Aligned_cols=68 Identities=16% Similarity=0.126 Sum_probs=49.7
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhcc-eEEEEE
Q 002143 643 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKL-FEMHLY 721 (960)
Q Consensus 643 s~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk~-YEIvIy 721 (960)
..+...+++|+||||+....+. ..+ -.+.+.||+.++|++|.+. |.++|.
T Consensus 22 ~~~~k~v~~D~DGTL~~~~~~~------~~~-----------------------~~~~~~pg~~e~L~~L~~~G~~~~iv 72 (211)
T 2gmw_A 22 AKSVPAIFLDRDGTINVDHGYV------HEI-----------------------DNFEFIDGVIDAMRELKKMGFALVVV 72 (211)
T ss_dssp --CBCEEEECSBTTTBCCCSSC------CSG-----------------------GGCCBCTTHHHHHHHHHHTTCEEEEE
T ss_pred hhcCCEEEEcCCCCeECCCCcc------cCc-----------------------ccCcCCcCHHHHHHHHHHCCCeEEEE
Confidence 3445689999999999763210 000 0134679999999999865 999999
Q ss_pred cCCc---------------HHHHHHHHHHhcCC
Q 002143 722 TMGN---------------KLYATEMAKVLDPK 739 (960)
Q Consensus 722 TAgt---------------reYAd~VLdiLDP~ 739 (960)
|++. ..++..+++.++-.
T Consensus 73 Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 105 (211)
T 2gmw_A 73 TNQSGIARGKFTEAQFETLTEWMDWSLADRDVD 105 (211)
T ss_dssp EECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred ECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence 9999 58889999887643
No 62
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=96.95 E-value=0.00037 Score=67.28 Aligned_cols=84 Identities=24% Similarity=0.154 Sum_probs=60.8
Q ss_pred EeeccCHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk-~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
++..||+.++|+.+.+ .|.+.|.|++.+.++..+++.++-.. +|.. +++.++.. ..+.+ ...|.+=++ .+|.+
T Consensus 83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~-~fd~-~~~~~~~~-~~KP~-p~~~~~a~~-~lg~~p 157 (216)
T 3kbb_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YFDV-MVFGDQVK-NGKPD-PEIYLLVLE-RLNVVP 157 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSE-EECGGGSS-SCTTS-THHHHHHHH-HHTCCG
T ss_pred cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc-cccc-cccccccC-CCccc-HHHHHHHHH-hhCCCc
Confidence 5789999999999965 59999999999999999999988765 7875 44444332 11211 112334444 46776
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|+|+|++.
T Consensus 158 ~e~l~VgDs~~ 168 (216)
T 3kbb_A 158 EKVVVFEDSKS 168 (216)
T ss_dssp GGEEEEECSHH
T ss_pred cceEEEecCHH
Confidence 89999999963
No 63
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=96.94 E-value=0.0011 Score=62.37 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=67.2
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhcc-eEEEEEcCC
Q 002143 646 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKL-FEMHLYTMG 724 (960)
Q Consensus 646 KLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk~-YEIvIyTAg 724 (960)
...+++||||||+++... +.+ .....-.+.|+..++|+++.+. +.++|.|++
T Consensus 9 ~k~v~~DlDGTL~~~~~~--~~~-------------------------~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~ 61 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLY--YTE-------------------------HGETIKVFNVLDGIGIKLLQKMGITLAVISGR 61 (162)
T ss_dssp CCEEEECCTTTTSCSEEE--EET-------------------------TEEEEEEEEHHHHHHHHHHHTTTCEEEEEESC
T ss_pred eeEEEEecCcceECCcee--ecC-------------------------CCceeeeecccHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999986421 000 0122344678899999999875 999999999
Q ss_pred cHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCCCC
Q 002143 725 NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVR 787 (960)
Q Consensus 725 treYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDsp~ 787 (960)
...++..+++.++-.. +|... .. +. ..++.+-..+|.+ +.+++|+|+..
T Consensus 62 ~~~~~~~~l~~~gl~~-~~~~~---kp------~~----~~~~~~~~~~~~~~~~~~~vGD~~~ 111 (162)
T 2p9j_A 62 DSAPLITRLKELGVEE-IYTGS---YK------KL----EIYEKIKEKYSLKDEEIGFIGDDVV 111 (162)
T ss_dssp CCHHHHHHHHHTTCCE-EEECC-----------CH----HHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred CcHHHHHHHHHcCCHh-hccCC---CC------CH----HHHHHHHHHcCCCHHHEEEECCCHH
Confidence 9999999999887543 44320 00 00 1122222245665 78999999974
No 64
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=96.82 E-value=0.00068 Score=65.15 Aligned_cols=87 Identities=14% Similarity=0.108 Sum_probs=58.5
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCC-C-CCCCCCCCccccCCcccCCC
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGD-P-FDGDERVPKSKDLEGVLGME 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~-~-~dGder~~yiKDLsrVLGrd 776 (960)
+.++||+.++|+++.+.|.++|.|++...++..+++.++-.. +|...++..++... . ..+. ...+.+=++ .++..
T Consensus 68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~~~~~~p~-p~~~~~~l~-~l~~~ 144 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQ-KDPKRQSVI-AFKSL 144 (206)
T ss_dssp CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCC-EEEEEEEECTTSCEEEEECCS-SSHHHHHHH-HHHHT
T ss_pred cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcc-eecceeEEcCCceEEeeecCC-CchHHHHHH-HHHhc
Confidence 567999999999998779999999999999999999987765 67544554332110 0 0010 112323333 23433
Q ss_pred -CcEEEEcCCCCc
Q 002143 777 -SAVVIIDDSVRV 788 (960)
Q Consensus 777 -s~VVIVDDsp~v 788 (960)
..+++|+|+..-
T Consensus 145 ~~~~~~iGD~~~D 157 (206)
T 1rku_A 145 YYRVIAAGDSYND 157 (206)
T ss_dssp TCEEEEEECSSTT
T ss_pred CCEEEEEeCChhh
Confidence 789999999743
No 65
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=96.80 E-value=0.00086 Score=69.70 Aligned_cols=86 Identities=7% Similarity=0.112 Sum_probs=64.7
Q ss_pred HhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccC----CCccEEEecCCC------CHHHHHHHhCCCcEE
Q 002143 867 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHID----DQVTHVVANSLG------TDKVNWALSTGRFVV 936 (960)
Q Consensus 867 rqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd----~kVTHLVAss~g------T~Kv~~Alk~GI~IV 936 (960)
..+|.|+.++|.+-- +....+.++++.-||+|..... .+.||+++...+ ..++..+.+.|++||
T Consensus 133 ~~lF~g~~v~l~~~~------~~~~~l~~ii~agGg~vl~~~~~~~~~~~t~~~vd~~~~~~~~~~~~~~~~~~~~i~~v 206 (235)
T 3al2_A 133 EGAFSGWKVILHVDQ------SREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDLNKLKPDDSGVNIAEAAAQNVYCL 206 (235)
T ss_dssp SSTTTTCEEEEECCH------HHHHHHHHHHHHTTCEECSSCCGGGGGGCSEEEECC--------CCCHHHHHHTTCEEE
T ss_pred CCCCCCcEEEEecCC------CcHHHHHHHHHcCCcEEecCCCCCccccCceEEEecccCCccchhHHHHHHHHcCCcEE
Confidence 479999999887631 2235688899999999986543 347998775321 135666778999999
Q ss_pred cHHHHHHHHHhccCCCCCCCCC
Q 002143 937 HPGWVEASALLYRRANEQDFAI 958 (960)
Q Consensus 937 SpdWLedC~~~wkRvDEs~YlL 958 (960)
+++||.+|+......+-..|.|
T Consensus 207 ~~ewlld~i~~~~~~~~~~y~l 228 (235)
T 3al2_A 207 RTEYIADYLMQESPPHVENYCL 228 (235)
T ss_dssp ETHHHHHHHHCSSCCCHHHHBC
T ss_pred cHHHHHHHHhcCCCCChhheEc
Confidence 9999999999988878777765
No 66
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=96.75 E-value=0.00061 Score=65.54 Aligned_cols=83 Identities=10% Similarity=0.059 Sum_probs=57.9
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+...|++.++|+.+.+. |.++|+|++...++..+++.++-.. +|.. +++.+++.. .+.. . ..++-+-..+|.+
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~ 169 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTN-SFDH-LISVDEVRL-FKPH-Q-KVYELAMDTLHLGE 169 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGG-GCSE-EEEGGGTTC-CTTC-H-HHHHHHHHHHTCCG
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChh-hcce-eEehhhccc-CCCC-h-HHHHHHHHHhCCCc
Confidence 56789999999999876 9999999999999999999877544 5664 555443321 1110 0 0122222245776
Q ss_pred CcEEEEcCCC
Q 002143 777 SAVVIIDDSV 786 (960)
Q Consensus 777 s~VVIVDDsp 786 (960)
+.+|+|+|+.
T Consensus 170 ~~~~~iGD~~ 179 (230)
T 3um9_A 170 SEILFVSCNS 179 (230)
T ss_dssp GGEEEEESCH
T ss_pred ccEEEEeCCH
Confidence 8899999996
No 67
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=96.63 E-value=0.0017 Score=70.95 Aligned_cols=56 Identities=14% Similarity=0.156 Sum_probs=48.4
Q ss_pred hhHHHHHHHhCCEEeccc-CCCccEEEecCCC----CHHHHHHHhCCCcEEcHHHHHHHHHh
Q 002143 891 HPLWQTAEQFGAVCTKHI-DDQVTHVVANSLG----TDKVNWALSTGRFVVHPGWVEASALL 947 (960)
Q Consensus 891 ~~LwklAe~LGAtVssdV-d~kVTHLVAss~g----T~Kv~~Alk~GI~IVSpdWLedC~~~ 947 (960)
..+.+.++++|+++. ++ .++|||||..+.+ |.|..+|+-.|++||+++||.+++..
T Consensus 127 ~~L~~~L~~LGik~v-~~~~detTHlVm~krnT~KvTvK~L~ALI~gkPIV~~~Fl~al~~~ 187 (325)
T 3huf_A 127 SQWASNLNLLGIPTG-LRDSDATTHFVMNRQAGSSITVGTMYAFLKKTVIIDDSYLQYLSTV 187 (325)
T ss_dssp HHHHHHHHTTTCCEE-SSCCTTCCEEECCCCCSSCCCHHHHHHHHTTCEEECHHHHHHHTTC
T ss_pred HHHHHHHHHcCCEEE-EccCCCEEEEEEeccccccchHHHHHHHHCCCcEecHHHHHHHHHh
Confidence 457889999999999 88 6789999997645 45699999999999999999998654
No 68
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=96.35 E-value=0.0015 Score=70.04 Aligned_cols=88 Identities=16% Similarity=0.258 Sum_probs=57.4
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCC------CCCCCCCCCCCCccccCCc
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGD------DGDPFDGDERVPKSKDLEG 771 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRdd------c~~~~dGder~~yiKDLsr 771 (960)
+.++||+.++|+++.+. |.++|.|++...+++.+++.+.-.. +|...+...+. ++....+......++.+..
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~-~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~ 256 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY-AFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA 256 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe-EEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence 56999999999999876 9999999999999999999988654 67764432221 0000000000001111212
Q ss_pred ccCCC-CcEEEEcCCCC
Q 002143 772 VLGME-SAVVIIDDSVR 787 (960)
Q Consensus 772 VLGrd-s~VVIVDDsp~ 787 (960)
.+|.+ +.+|+|+|+..
T Consensus 257 ~lgv~~~~~i~VGDs~~ 273 (317)
T 4eze_A 257 RLNIATENIIACGDGAN 273 (317)
T ss_dssp HHTCCGGGEEEEECSGG
T ss_pred HcCCCcceEEEEeCCHH
Confidence 34666 78999999964
No 69
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=96.31 E-value=0.00092 Score=67.69 Aligned_cols=86 Identities=20% Similarity=0.162 Sum_probs=57.1
Q ss_pred EeeccCHHHHHHHhhc-ce--EEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCC-CCCC-CCCCccccCCccc
Q 002143 699 TKLRPGIWTFLERASK-LF--EMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDP-FDGD-ERVPKSKDLEGVL 773 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk-~Y--EIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~-~dGd-er~~yiKDLsrVL 773 (960)
+...|++.++|+.+.+ .| .++|+|++...++..+++.++-.. +|.. +++.+..... ..+. ....+.+=+. .+
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~fd~-v~~~~~~~~~~~~~Kp~~~~~~~~~~-~l 217 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIAD-LFDG-LTYCDYSRTDTLVCKPHVKAFEKAMK-ES 217 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTT-SCSE-EECCCCSSCSSCCCTTSHHHHHHHHH-HH
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccc-ccce-EEEeccCCCcccCCCcCHHHHHHHHH-Hc
Confidence 6679999999999986 58 999999999999999999887665 6765 4433322110 0110 0001111222 35
Q ss_pred CCC--CcEEEEcCCCC
Q 002143 774 GME--SAVVIIDDSVR 787 (960)
Q Consensus 774 Grd--s~VVIVDDsp~ 787 (960)
|.+ +.+|+|+|+..
T Consensus 218 gi~~~~~~i~vGD~~~ 233 (282)
T 3nuq_A 218 GLARYENAYFIDDSGK 233 (282)
T ss_dssp TCCCGGGEEEEESCHH
T ss_pred CCCCcccEEEEcCCHH
Confidence 654 78999999973
No 70
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=96.28 E-value=0.0027 Score=61.71 Aligned_cols=84 Identities=13% Similarity=0.131 Sum_probs=53.3
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceee-eeeeecCCCCCCCCCCCCCCccccCCcccCCC
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA-GRVISRGDDGDPFDGDERVPKSKDLEGVLGME 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~-~RIySRddc~~~~dGder~~yiKDLsrVLGrd 776 (960)
+...|++.++|+++.+. +.++|+|++...++..+++. +-.. +|. +.+++.+++.. .+.. ...+.+=++ .+|.+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~-~f~~~~~~~~~~~~~-~kp~-~~~~~~~~~-~lg~~ 181 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPG-IFQANLMVTAFDVKY-GKPN-PEPYLMALK-KGGFK 181 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTT-TCCGGGEECGGGCSS-CTTS-SHHHHHHHH-HHTCC
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHH-hcCCCeEEecccCCC-CCCC-CHHHHHHHH-HcCCC
Confidence 56789999999999876 99999999999999998886 4443 562 23555443221 1110 001222222 46776
Q ss_pred -CcEEEEcCCCC
Q 002143 777 -SAVVIIDDSVR 787 (960)
Q Consensus 777 -s~VVIVDDsp~ 787 (960)
+.+|+|+|+..
T Consensus 182 ~~~~i~vGD~~~ 193 (247)
T 3dv9_A 182 PNEALVIENAPL 193 (247)
T ss_dssp GGGEEEEECSHH
T ss_pred hhheEEEeCCHH
Confidence 88999999973
No 71
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=96.25 E-value=0.0086 Score=66.43 Aligned_cols=111 Identities=15% Similarity=0.115 Sum_probs=70.2
Q ss_pred CCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhcc-eEEEEEc
Q 002143 644 ARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKL-FEMHLYT 722 (960)
Q Consensus 644 ~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk~-YEIvIyT 722 (960)
.+...++|||||||+.+..... +.. ...-|..+-||+.++|++|.+. |.|+|.|
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~--------~~~-----------------~~~~~~~~~pgv~e~L~~L~~~G~~l~IvT 110 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKV--------FPT-----------------SPSDWRILYPEIPKKLQELAAEGYKLVIFT 110 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSS--------SCS-----------------STTCCEESCTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEEeCCCCccccCCCcc--------CCC-----------------CHHHhhhhcccHHHHHHHHHHCCCeEEEEe
Confidence 4567899999999997742100 000 0112444789999999999875 9999999
Q ss_pred CCc------------HHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccC----CC-CcEEEEcCC
Q 002143 723 MGN------------KLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLG----ME-SAVVIIDDS 785 (960)
Q Consensus 723 Agt------------reYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLG----rd-s~VVIVDDs 785 (960)
+.. ..++..+++.++- .|.. +++.++|. +.+.+ ...+.+=+. .+| .+ +.+|+|.|+
T Consensus 111 N~~gi~~g~~~~~~~~~~~~~~l~~lgl---~fd~-i~~~~~~~-~~KP~-p~~~~~a~~-~l~~~~~v~~~~~l~VGDs 183 (416)
T 3zvl_A 111 NQMGIGRGKLPAEVFKGKVEAVLEKLGV---PFQV-LVATHAGL-NRKPV-SGMWDHLQE-QANEGIPISVEDSVFVGDA 183 (416)
T ss_dssp ECHHHHTTSSCHHHHHHHHHHHHHHHTS---CCEE-EEECSSST-TSTTS-SHHHHHHHH-HSSTTCCCCGGGCEEECSC
T ss_pred CCccccCCCCCHHHHHHHHHHHHHHcCC---CEEE-EEECCCCC-CCCCC-HHHHHHHHH-HhCCCCCCCHHHeEEEECC
Confidence 966 3447788887764 3653 66665543 12211 112323333 344 45 789999999
Q ss_pred C
Q 002143 786 V 786 (960)
Q Consensus 786 p 786 (960)
.
T Consensus 184 ~ 184 (416)
T 3zvl_A 184 A 184 (416)
T ss_dssp S
T ss_pred C
Confidence 6
No 72
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=96.10 E-value=0.0029 Score=62.98 Aligned_cols=82 Identities=16% Similarity=0.127 Sum_probs=56.7
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
+.+.|++.++|+.+. .|.++|.|++...++..+++.++-.. +|.. +++.+++.. .+.. ...+.+=++ .+|.+ +
T Consensus 92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~~-~f~~-~~~~~~~~~-~Kp~-~~~~~~~~~-~~~~~~~ 165 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLTD-SFDA-VISVDAKRV-FKPH-PDSYALVEE-VLGVTPA 165 (253)
T ss_dssp CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEGGGGTC-CTTS-HHHHHHHHH-HHCCCGG
T ss_pred CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCchh-hccE-EEEccccCC-CCCC-HHHHHHHHH-HcCCCHH
Confidence 467899999999999 99999999999999999999876543 5654 555443221 1110 001222222 45766 8
Q ss_pred cEEEEcCCC
Q 002143 778 AVVIIDDSV 786 (960)
Q Consensus 778 ~VVIVDDsp 786 (960)
.+|+|+|+.
T Consensus 166 ~~~~vGD~~ 174 (253)
T 1qq5_A 166 EVLFVSSNG 174 (253)
T ss_dssp GEEEEESCH
T ss_pred HEEEEeCCh
Confidence 899999986
No 73
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=96.06 E-value=0.027 Score=56.15 Aligned_cols=44 Identities=20% Similarity=0.311 Sum_probs=38.7
Q ss_pred eeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceee
Q 002143 700 KLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA 744 (960)
Q Consensus 700 kLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~ 744 (960)
.++|++.++|+++.+. +.++|.|.+.+.++..+++.+.-.. +|.
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~ 188 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD-YFA 188 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EEC
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh-HhH
Confidence 7899999999999875 9999999999999999999987653 454
No 74
>4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.05 E-value=0.0067 Score=61.62 Aligned_cols=96 Identities=23% Similarity=0.325 Sum_probs=70.2
Q ss_pred HHHHHHHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEE-ecccCCCccEEEecCC----CCHHHHHHHhCCCcE
Q 002143 861 ILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVC-TKHIDDQVTHVVANSL----GTDKVNWALSTGRFV 935 (960)
Q Consensus 861 ILkelRrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtV-ssdVd~kVTHLVAss~----gT~Kv~~Alk~GI~I 935 (960)
||+.++-.-+.|..+|+.-+-|..+ -..-.+.++....||.- ...+.-++||+||+.. ..+....|+-++|+|
T Consensus 153 ilrthkmtdmsgitvclgpldplke--isdlqisqclshigarplqrhvaidtthfvcndldneesneelirakhnnipi 230 (290)
T 4gns_A 153 ILRTHKMTDMSGITVCLGPLDPLKE--ISDLQISQCLSHIGARPLQRHVAIDTTHFVCNDLDNEESNEELIRAKHNNIPI 230 (290)
T ss_dssp EEECCCTTCCTTCCEEECCCCGGGT--CCHHHHHHHHHHTTCCCCBSSCCTTCCEEECSCCTTCTTCHHHHHHHHTTCCE
T ss_pred eeeecccccccCceEEecCCChhhh--hhhccHHHHHHHhCCchhhheeeeecceeeecCCCcccchHHHHhhhccCCCc
Confidence 6777777778999999976655421 11113456666778874 3445568999999973 345677788899999
Q ss_pred EcHHHHHHHHHhccCCCCCCCCC
Q 002143 936 VHPGWVEASALLYRRANEQDFAI 958 (960)
Q Consensus 936 VSpdWLedC~~~wkRvDEs~YlL 958 (960)
|.|+|+.+|-...+.+.-..|.+
T Consensus 231 vrpewvracevekrivgvrgfyl 253 (290)
T 4gns_A 231 VRPEWVRACEVEKRIVGVRGFYL 253 (290)
T ss_dssp ECTHHHHHHHHTTSCCCSGGGBT
T ss_pred cCHHHHHHHhhhheeeeeeeEEE
Confidence 99999999999888877777655
No 75
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=96.04 E-value=0.0012 Score=64.73 Aligned_cols=84 Identities=13% Similarity=0.003 Sum_probs=56.3
Q ss_pred eeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHh---cCCC--ceeeeeeeecCCCCCCCCCCCCCCccccCCcccC
Q 002143 700 KLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVL---DPKG--VLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLG 774 (960)
Q Consensus 700 kLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiL---DP~g--~lF~~RIySRddc~~~~dGder~~yiKDLsrVLG 774 (960)
.+.|++.++|+.+.+.|.++|.|++...++..+++.| +-.+ .+|.. ++..+++.. .+.+ ...+.+=+. .+|
T Consensus 112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~-i~~~~~~~~-~KP~-~~~~~~~~~-~~g 187 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEK-TYLSYEMKM-AKPE-PEIFKAVTE-DAG 187 (229)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSE-EEEHHHHTC-CTTC-HHHHHHHHH-HHT
T ss_pred hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCE-EEeecccCC-CCCC-HHHHHHHHH-HcC
Confidence 4679999999999977999999999999999888777 4443 24554 444433221 1110 001222233 457
Q ss_pred CC-CcEEEEcCCCC
Q 002143 775 ME-SAVVIIDDSVR 787 (960)
Q Consensus 775 rd-s~VVIVDDsp~ 787 (960)
.+ +.+|+|+|++.
T Consensus 188 ~~~~~~~~vGD~~~ 201 (229)
T 4dcc_A 188 IDPKETFFIDDSEI 201 (229)
T ss_dssp CCGGGEEEECSCHH
T ss_pred CCHHHeEEECCCHH
Confidence 76 89999999973
No 76
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=96.03 E-value=0.0079 Score=58.50 Aligned_cols=49 Identities=24% Similarity=0.395 Sum_probs=41.9
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCC-ceeeeee
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKG-VLFAGRV 747 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g-~lF~~RI 747 (960)
+.++||+.++|+++.+. +.++|.|++...++..+++.++-.. .+|...+
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~ 135 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRL 135 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECE
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeE
Confidence 56899999999999875 9999999999999999999887653 4776643
No 77
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=95.80 E-value=0.0028 Score=61.38 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=34.9
Q ss_pred EeeccCHHHHHHHhhcc--eEEEEEcCCcHHHHHHHHHHhc
Q 002143 699 TKLRPGIWTFLERASKL--FEMHLYTMGNKLYATEMAKVLD 737 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~--YEIvIyTAgtreYAd~VLdiLD 737 (960)
+.+.||+.++|+++.+. |.++|.|++.+.++..+++.++
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~g 112 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYR 112 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhC
Confidence 56889999999999974 9999999999999998888765
No 78
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=95.78 E-value=0.0093 Score=59.00 Aligned_cols=64 Identities=17% Similarity=0.112 Sum_probs=47.6
Q ss_pred CCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcC
Q 002143 645 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 723 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTA 723 (960)
....+++|+|+||+....+. .. . ....+.|++.++|++|.+ -|.++|.|+
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~--~~----~-----------------------~~~~~~~g~~e~L~~L~~~G~~~~i~Tn 80 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYP--SD----P-----------------------AEIVLRPQMLPAIATANRAGIPVVVVTN 80 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCT--TC----G-----------------------GGCCBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred cCCEEEEeCCCCcCCCCccc--CC----c-----------------------ccCeECcCHHHHHHHHHHCCCEEEEEcC
Confidence 45678999999999763211 00 0 012468999999999986 499999999
Q ss_pred CcH---------------HHHHHHHHHhc
Q 002143 724 GNK---------------LYATEMAKVLD 737 (960)
Q Consensus 724 gtr---------------eYAd~VLdiLD 737 (960)
+.. .++..+++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 109 (218)
T 2o2x_A 81 QSGIARGYFGWSAFAAVNGRVLELLREEG 109 (218)
T ss_dssp CHHHHTTSCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCcccccHHHHHHHHHHHHHHHHHcC
Confidence 998 78888888765
No 79
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=95.74 E-value=0.0081 Score=59.35 Aligned_cols=84 Identities=12% Similarity=0.005 Sum_probs=56.8
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+.+.|++.++|+++.+. |.++|+|++...++..+++.+.-.+.+|. .+++.++... .+.. . ..++.+-..+|.+
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~ 185 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPA-STVFATDVVR-GRPF-P-DMALKVALELEVGH 185 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCS-EEECGGGSSS-CTTS-S-HHHHHHHHHHTCSC
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCc-eEecHHhcCC-CCCC-H-HHHHHHHHHcCCCC
Confidence 57889999999999876 99999999999999999998765542254 3555443221 1110 0 1122222245654
Q ss_pred -CcEEEEcCCC
Q 002143 777 -SAVVIIDDSV 786 (960)
Q Consensus 777 -s~VVIVDDsp 786 (960)
+.+|+|+|+.
T Consensus 186 ~~~~i~vGD~~ 196 (277)
T 3iru_A 186 VNGCIKVDDTL 196 (277)
T ss_dssp GGGEEEEESSH
T ss_pred CccEEEEcCCH
Confidence 6899999996
No 80
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=95.67 E-value=0.0087 Score=66.91 Aligned_cols=119 Identities=16% Similarity=0.138 Sum_probs=72.9
Q ss_pred hhhhcCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEE-EeeccCHHHHHHHhhcc-e
Q 002143 639 KKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMW-TKLRPGIWTFLERASKL-F 716 (960)
Q Consensus 639 ~~lls~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~y-VkLRPgL~EFLeeLSk~-Y 716 (960)
..+...+.++||||||+||+.-... ..++ + .+.+. .++- -..-||+.++|+.+.+. +
T Consensus 215 ~~l~~~~iK~lv~DvDnTL~~G~l~-----~dG~------~---------~~~~~-dg~g~g~~ypgv~e~L~~Lk~~Gi 273 (387)
T 3nvb_A 215 AAIQGKFKKCLILDLDNTIWGGVVG-----DDGW------E---------NIQVG-HGLGIGKAFTEFQEWVKKLKNRGI 273 (387)
T ss_dssp HHHTTCCCCEEEECCBTTTBBSCHH-----HHCG------G---------GSBCS-SSSSTHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCCcEEEEcCCCCCCCCeec-----CCCc------e---------eEEec-cCccccccCHHHHHHHHHHHHCCC
Confidence 3456788899999999999976420 0000 0 00010 0010 12458999999999976 9
Q ss_pred EEEEEcCCcHHHHHHHHHH-----hcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCCCCcc
Q 002143 717 EMHLYTMGNKLYATEMAKV-----LDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVW 789 (960)
Q Consensus 717 EIvIyTAgtreYAd~VLdi-----LDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDsp~vw 789 (960)
.+.|.|+..+.++..+++. |...+ +|. ++... .. +. ..+.+=++ .+|-. +.+|+|+|+..-.
T Consensus 274 ~laI~Snn~~~~v~~~l~~~~~~~l~l~~-~~~--v~~~~--KP--Kp---~~l~~al~-~Lgl~pee~v~VGDs~~Di 341 (387)
T 3nvb_A 274 IIAVCSKNNEGKAKEPFERNPEMVLKLDD-IAV--FVANW--EN--KA---DNIRTIQR-TLNIGFDSMVFLDDNPFER 341 (387)
T ss_dssp EEEEEEESCHHHHHHHHHHCTTCSSCGGG-CSE--EEEES--SC--HH---HHHHHHHH-HHTCCGGGEEEECSCHHHH
T ss_pred EEEEEcCCCHHHHHHHHhhccccccCccC-ccE--EEeCC--CC--cH---HHHHHHHH-HhCcCcccEEEECCCHHHH
Confidence 9999999999999999986 33333 343 22111 00 00 01222232 45766 8899999997544
No 81
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=95.65 E-value=0.0052 Score=60.95 Aligned_cols=79 Identities=14% Similarity=0.028 Sum_probs=49.8
Q ss_pred EeeccCHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk-~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+.+.||+.++|++|.+ -|.+.|.|+..+..+..+ +. .+|.. +++.++.. ..+. ....+.+-+. .+|..
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~---~~---~~~d~-v~~~~~~~-~~KP-~p~~~~~a~~-~l~~~~ 104 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPL---AA---PVNDW-MIAAPRPT-AGWP-QPDACWMALM-ALNVSQ 104 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH---HT---TTTTT-CEECCCCS-SCTT-STHHHHHHHH-HTTCSC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh---cC---ccCCE-EEECCcCC-CCCC-ChHHHHHHHH-HcCCCC
Confidence 3467999999999976 599999999988887443 33 24543 56555432 1111 0112333343 35653
Q ss_pred -CcEEEEcCCCC
Q 002143 777 -SAVVIIDDSVR 787 (960)
Q Consensus 777 -s~VVIVDDsp~ 787 (960)
+.+|+|.|+..
T Consensus 105 ~~~~v~VGDs~~ 116 (196)
T 2oda_A 105 LEGCVLISGDPR 116 (196)
T ss_dssp STTCEEEESCHH
T ss_pred CccEEEEeCCHH
Confidence 67999999973
No 82
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=95.37 E-value=0.027 Score=54.45 Aligned_cols=100 Identities=13% Similarity=0.052 Sum_probs=66.5
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcCCc
Q 002143 647 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMGN 725 (960)
Q Consensus 647 LTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTAgt 725 (960)
+.+++|||+||+++... +.+ .....-.+.|...++|+++.+ -+.++|.|...
T Consensus 9 k~i~~DlDGTL~~~~~~--~~~-------------------------~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~ 61 (180)
T 1k1e_A 9 KFVITDVDGVLTDGQLH--YDA-------------------------NGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRD 61 (180)
T ss_dssp CEEEEECTTTTSCSEEE--EET-------------------------TEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred eEEEEeCCCCcCCCCee--ecc-------------------------CcceeeeeccchHHHHHHHHHCCCeEEEEeCCC
Confidence 57999999999986421 000 012233466777899999976 49999999999
Q ss_pred HHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCCCC
Q 002143 726 KLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVR 787 (960)
Q Consensus 726 reYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDsp~ 787 (960)
..++..+++.++-.. +|.. +.. ++ ..++.+...+|.+ +.++.|.|+..
T Consensus 62 ~~~~~~~~~~lgl~~-~~~~-------~k~--k~----~~~~~~~~~~~~~~~~~~~vGD~~~ 110 (180)
T 1k1e_A 62 SPILRRRIADLGIKL-FFLG-------KLE--KE----TACFDLMKQAGVTAEQTAYIGDDSV 110 (180)
T ss_dssp CHHHHHHHHHHTCCE-EEES-------CSC--HH----HHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred cHHHHHHHHHcCCce-eecC-------CCC--cH----HHHHHHHHHcCCCHHHEEEECCCHH
Confidence 999999999987653 4422 100 00 1223332245665 78999999974
No 83
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=95.14 E-value=0.0029 Score=69.22 Aligned_cols=88 Identities=17% Similarity=0.201 Sum_probs=56.8
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCC------CCCCCCCCCCCCccccCCc
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGD------DGDPFDGDERVPKSKDLEG 771 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRdd------c~~~~dGder~~yiKDLsr 771 (960)
+.++||+.++|+++.+. |.++|.|++...+++.+++.++-.. +|.+.+...+. ++....+......++.+..
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDY-VAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSE-EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccc-eeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 57899999999999876 9999999999999999999987753 56653321110 0000000000001112222
Q ss_pred ccCCC-CcEEEEcCCCC
Q 002143 772 VLGME-SAVVIIDDSVR 787 (960)
Q Consensus 772 VLGrd-s~VVIVDDsp~ 787 (960)
.+|.+ +.+|.|+|+..
T Consensus 334 ~~gi~~~~~i~vGD~~~ 350 (415)
T 3p96_A 334 RAGVPMAQTVAVGDGAN 350 (415)
T ss_dssp HHTCCGGGEEEEECSGG
T ss_pred HcCcChhhEEEEECCHH
Confidence 34666 78999999974
No 84
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=95.03 E-value=0.025 Score=53.07 Aligned_cols=66 Identities=20% Similarity=0.174 Sum_probs=45.0
Q ss_pred HHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCC
Q 002143 708 FLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 785 (960)
Q Consensus 708 FLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDs 785 (960)
+|+++.+. +.++|.|+....+++.+++.+.-.. +|... .. ++ ..++.+...+|.+ +.+++|.|+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~~~~~---kp------k~----~~~~~~~~~~~~~~~~~~~vGD~ 104 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY-LFQGV---VD------KL----SAAEELCNELGINLEQVAYIGDD 104 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE-EECSC---SC------HH----HHHHHHHHHHTCCGGGEEEECCS
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE-eeccc---CC------hH----HHHHHHHHHcCCCHHHEEEECCC
Confidence 78888765 9999999999999999999887543 33321 00 00 1122232245666 789999999
Q ss_pred CC
Q 002143 786 VR 787 (960)
Q Consensus 786 p~ 787 (960)
..
T Consensus 105 ~~ 106 (164)
T 3e8m_A 105 LN 106 (164)
T ss_dssp GG
T ss_pred HH
Confidence 74
No 85
>2l42_A DNA-binding protein RAP1; BRCT domain, protein binding; NMR {Saccharomyces cerevisiae}
Probab=94.84 E-value=0.018 Score=53.81 Aligned_cols=85 Identities=9% Similarity=0.101 Sum_probs=63.0
Q ss_pred hhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEecccCCCc--cEEEecCCCCHHHHHHHhCCCcEEcHHHHHHHH
Q 002143 868 KILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQV--THVVANSLGTDKVNWALSTGRFVVHPGWVEASA 945 (960)
Q Consensus 868 qILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVssdVd~kV--THLVAss~gT~Kv~~Alk~GI~IVSpdWLedC~ 945 (960)
.+|+|..+++..--...+.--+...|.+++..+||+|...+.++. -+.|++.-++. +++.|+|.+|.+|+
T Consensus 10 ~vF~g~~Fyin~d~~a~ds~~d~d~L~~lI~~nGG~Vl~~lP~~s~~~~yVVSpyN~t--------~LpTVtpTYI~aC~ 81 (106)
T 2l42_A 10 PPLSNMKFYLNRDADAHDSLNDIDQLARLIRANGGEVLDSKPRESKENVFIVSPYNHT--------NLPTVTPTYIKACC 81 (106)
T ss_dssp CSSCCCCBEECCSSSCSSCSSTHHHHHHHHHTTTSCCCEECCCCCSSCCCCBCTTCCC--------SSSBCCTTHHHHHH
T ss_pred ccccCcEEEEcCCCccchhhhHHHHHHHHHHhcCcEEhhhCcccccCCeEEEeCCCCC--------CCccccHHHHHHHH
Confidence 359999988865211111112235789999999999999988665 35555554433 78999999999999
Q ss_pred HhccCCCCCCCCCCC
Q 002143 946 LLYRRANEQDFAIKP 960 (960)
Q Consensus 946 ~~wkRvDEs~YlL~p 960 (960)
.....++-.+|++.+
T Consensus 82 ~~nTLLnv~~YLvp~ 96 (106)
T 2l42_A 82 QSNSLLNMENYLVPY 96 (106)
T ss_dssp HSTTSCGGGGCCBCS
T ss_pred hcCceecccccccCc
Confidence 999999999999864
No 86
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=94.84 E-value=0.001 Score=63.26 Aligned_cols=86 Identities=16% Similarity=0.159 Sum_probs=52.9
Q ss_pred EEeeccCHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHH-hcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCC
Q 002143 698 WTKLRPGIWTFLERAS-KLFEMHLYTMGNKLYATEMAKV-LDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM 775 (960)
Q Consensus 698 yVkLRPgL~EFLeeLS-k~YEIvIyTAgtreYAd~VLdi-LDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGr 775 (960)
++.+.|++.++|+++. ..+.++|.|++...++..++.. ++-. .+|.. +++.+++.. .+++ ...+.+=+. .+|.
T Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~-~~f~~-~~~~~~~~~-~Kp~-~~~~~~~~~-~~~~ 163 (206)
T 2b0c_A 89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR-DAADH-IYLSQDLGM-RKPE-ARIYQHVLQ-AEGF 163 (206)
T ss_dssp EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH-HHCSE-EEEHHHHTC-CTTC-HHHHHHHHH-HHTC
T ss_pred hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChh-hheee-EEEecccCC-CCCC-HHHHHHHHH-HcCC
Confidence 5788999999999998 5699999999998887665543 2211 23543 444332211 1110 001222222 4576
Q ss_pred C-CcEEEEcCCCCc
Q 002143 776 E-SAVVIIDDSVRV 788 (960)
Q Consensus 776 d-s~VVIVDDsp~v 788 (960)
+ +.+|+|+|+..-
T Consensus 164 ~~~~~~~vgD~~~D 177 (206)
T 2b0c_A 164 SPSDTVFFDDNADN 177 (206)
T ss_dssp CGGGEEEEESCHHH
T ss_pred CHHHeEEeCCCHHH
Confidence 6 889999999743
No 87
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=94.61 E-value=0.043 Score=57.37 Aligned_cols=78 Identities=18% Similarity=0.208 Sum_probs=49.3
Q ss_pred hcCCCeEEEEeCCCceeecccCC--------CCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhh
Q 002143 642 FSARKLCLVLDLDHTLLNSAKFH--------EVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS 713 (960)
Q Consensus 642 ls~kKLTLVLDLDETLVHSs~~~--------eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLS 713 (960)
...+...+|+||||||+.+..+. .+.....+|+.. --..+.||+.+||++|.
T Consensus 55 ~~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~pg~~e~L~~L~ 114 (258)
T 2i33_A 55 GTEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINK--------------------AEAEALPGSIDFLKYTE 114 (258)
T ss_dssp CCSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHH--------------------CCCEECTTHHHHHHHHH
T ss_pred cCCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHc--------------------CCCCcCccHHHHHHHHH
Confidence 45677899999999999874100 000000111100 01456799999999998
Q ss_pred cc-eEEEEEcCCcH---HHHHHHHHHhcCC
Q 002143 714 KL-FEMHLYTMGNK---LYATEMAKVLDPK 739 (960)
Q Consensus 714 k~-YEIvIyTAgtr---eYAd~VLdiLDP~ 739 (960)
+. +.|+|.|+... ..+...++.+.-.
T Consensus 115 ~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 115 SKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp HTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred HCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 65 99999999884 4445555555443
No 88
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=94.43 E-value=0.062 Score=52.32 Aligned_cols=67 Identities=16% Similarity=0.104 Sum_probs=45.3
Q ss_pred HHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcC
Q 002143 707 TFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDD 784 (960)
Q Consensus 707 EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDD 784 (960)
.+|+++.+. +.++|.|+....++..+++.++-.. +|.. .. -++ ..++.+...+|.+ +.+++|+|
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-~~~~--------~k-pk~----~~~~~~~~~~g~~~~~~~~iGD 125 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-LYQG--------QS-NKL----IAFSDLLEKLAIAPENVAYVGD 125 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-EECS--------CS-CSH----HHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-eecC--------CC-CCH----HHHHHHHHHcCCCHHHEEEECC
Confidence 388888865 9999999999999999999887542 3321 10 001 1223332245666 78999999
Q ss_pred CCC
Q 002143 785 SVR 787 (960)
Q Consensus 785 sp~ 787 (960)
+..
T Consensus 126 ~~~ 128 (188)
T 2r8e_A 126 DLI 128 (188)
T ss_dssp SGG
T ss_pred CHH
Confidence 974
No 89
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=94.15 E-value=0.048 Score=53.39 Aligned_cols=101 Identities=15% Similarity=0.053 Sum_probs=63.4
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcCC
Q 002143 646 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMG 724 (960)
Q Consensus 646 KLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTAg 724 (960)
-..+++||||||+.+...- ... ...+ ..+.+++++ +|+++.+ -+.++|.|+.
T Consensus 19 ik~vifD~DGTL~d~~~~~--~~~-----------------~~~~------~~~~~~~~~--~l~~L~~~g~~~~i~T~~ 71 (189)
T 3mn1_A 19 IKLAVFDVDGVLTDGRLYF--MED-----------------GSEI------KTFNTLDGQ--GIKMLIASGVTTAIISGR 71 (189)
T ss_dssp CCEEEECSTTTTSCSEEEE--ETT-----------------SCEE------EEEEHHHHH--HHHHHHHTTCEEEEECSS
T ss_pred CCEEEEcCCCCcCCccEee--ccC-----------------CcEe------eeeccccHH--HHHHHHHCCCEEEEEECc
Confidence 4579999999999874210 000 0000 112334443 8888886 4999999999
Q ss_pred cHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCCCC
Q 002143 725 NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVR 787 (960)
Q Consensus 725 treYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDsp~ 787 (960)
.+.+++.+++.+.-.. +|.. + .+ ++ ..++.+...+|.+ +.++.|.|+..
T Consensus 72 ~~~~~~~~~~~lgl~~-~f~~-~--~~------K~----~~~~~~~~~~g~~~~~~~~vGD~~n 121 (189)
T 3mn1_A 72 KTAIVERRAKSLGIEH-LFQG-R--ED------KL----VVLDKLLAELQLGYEQVAYLGDDLP 121 (189)
T ss_dssp CCHHHHHHHHHHTCSE-EECS-C--SC------HH----HHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred ChHHHHHHHHHcCCHH-HhcC-c--CC------hH----HHHHHHHHHcCCChhHEEEECCCHH
Confidence 9999999999987643 4432 1 10 00 1223333345666 78999999974
No 90
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=93.98 E-value=0.051 Score=57.84 Aligned_cols=88 Identities=16% Similarity=0.171 Sum_probs=53.9
Q ss_pred cCCCeEEEEeCCCceeecccC--------CCCCCc-hhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhh
Q 002143 643 SARKLCLVLDLDHTLLNSAKF--------HEVDPV-HDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS 713 (960)
Q Consensus 643 s~kKLTLVLDLDETLVHSs~~--------~eldP~-~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLS 713 (960)
..+|..+|||+||||+..... ..+++. ..+|+. .-....-||+.+||+.+.
T Consensus 55 ~~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~--------------------~~~~~~~pG~~ell~~L~ 114 (262)
T 3ocu_A 55 KGKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVD--------------------ARQSRAVPGAVEFNNYVN 114 (262)
T ss_dssp TTCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHH--------------------HTCCEECTTHHHHHHHHH
T ss_pred CCCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHH--------------------cCCCCCCccHHHHHHHHH
Confidence 467789999999999988521 111110 011111 013568899999999997
Q ss_pred cc-eEEEEEcCCcHH----HHHHHHHHhcCCCceeeeeeeecC
Q 002143 714 KL-FEMHLYTMGNKL----YATEMAKVLDPKGVLFAGRVISRG 751 (960)
Q Consensus 714 k~-YEIvIyTAgtre----YAd~VLdiLDP~g~lF~~RIySRd 751 (960)
+. +.|+|.|+.... .+..-++.+.-.. ++..+|+-|.
T Consensus 115 ~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~-~~~~~Lilr~ 156 (262)
T 3ocu_A 115 SHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNG-VEESAFYLKK 156 (262)
T ss_dssp HTTEEEEEEEEEETTTTHHHHHHHHHHHTCSC-CSGGGEEEES
T ss_pred HCCCeEEEEeCCCccchHHHHHHHHHHcCcCc-ccccceeccC
Confidence 54 999999987654 5555555554322 1221455554
No 91
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=93.92 E-value=0.021 Score=55.62 Aligned_cols=39 Identities=10% Similarity=0.054 Sum_probs=33.7
Q ss_pred EeeccCHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHHHhc
Q 002143 699 TKLRPGIWTFLERASK--LFEMHLYTMGNKLYATEMAKVLD 737 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk--~YEIvIyTAgtreYAd~VLdiLD 737 (960)
+.+.||+.++|++|.+ .|.++|.|++.+.++..+++.++
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~ 114 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYA 114 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHH
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhc
Confidence 5688999999999987 59999999999988887777554
No 92
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=93.87 E-value=0.067 Score=51.75 Aligned_cols=65 Identities=14% Similarity=0.125 Sum_probs=45.0
Q ss_pred HHHHhhc-ceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCC
Q 002143 708 FLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 785 (960)
Q Consensus 708 FLeeLSk-~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDs 785 (960)
+|+++.+ -+.++|.|++...+++.+++.+.-. +|... .. ++ ..++.+...+|.+ +.++.|.|+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--~~~~~---~~------k~----~~l~~~~~~~~~~~~~~~~vGD~ 111 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--VLHGI---DR------KD----LALKQWCEEQGIAPERVLYVGND 111 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--EEESC---SC------HH----HHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--eEeCC---CC------hH----HHHHHHHHHcCCCHHHEEEEcCC
Confidence 7888875 4999999999999999999998865 44421 00 00 1222332345666 789999998
Q ss_pred CC
Q 002143 786 VR 787 (960)
Q Consensus 786 p~ 787 (960)
..
T Consensus 112 ~n 113 (176)
T 3mmz_A 112 VN 113 (176)
T ss_dssp GG
T ss_pred HH
Confidence 63
No 93
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=93.61 E-value=0.074 Score=56.56 Aligned_cols=75 Identities=17% Similarity=0.213 Sum_probs=47.9
Q ss_pred CCCeEEEEeCCCceeecccC--------CCCCCc-hhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc
Q 002143 644 ARKLCLVLDLDHTLLNSAKF--------HEVDPV-HDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK 714 (960)
Q Consensus 644 ~kKLTLVLDLDETLVHSs~~--------~eldP~-~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk 714 (960)
.+|..+|||+||||+..... ..+++. ..+|+. .-.....||+.+||+.|.+
T Consensus 56 g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~--------------------~g~~~~~pg~~ell~~L~~ 115 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVD--------------------ARQSAAIPGAVEFSNYVNA 115 (260)
T ss_dssp --CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHH--------------------TTCCEECTTHHHHHHHHHH
T ss_pred CCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHH--------------------cCCCCCCccHHHHHHHHHH
Confidence 45679999999999988521 111110 011110 0135688999999999985
Q ss_pred c-eEEEEEcCCcHH----HHHHHHHHhcC
Q 002143 715 L-FEMHLYTMGNKL----YATEMAKVLDP 738 (960)
Q Consensus 715 ~-YEIvIyTAgtre----YAd~VLdiLDP 738 (960)
. +.|+|.|+-... -+..-++.+.-
T Consensus 116 ~G~~i~ivTgR~~~~~r~~T~~~L~~lGi 144 (260)
T 3pct_A 116 NGGTMFFVSNRRDDVEKAGTVDDMKRLGF 144 (260)
T ss_dssp TTCEEEEEEEEETTTSHHHHHHHHHHHTC
T ss_pred CCCeEEEEeCCCccccHHHHHHHHHHcCc
Confidence 4 999999987654 55555665553
No 94
>3qbz_A DDK kinase regulatory subunit DBF4; FHA domain,RAD53, replication checkpoint, cell cycle; 2.69A {Saccharomyces cerevisiae}
Probab=92.46 E-value=0.2 Score=50.15 Aligned_cols=75 Identities=27% Similarity=0.156 Sum_probs=51.4
Q ss_pred Hhhhc-CceeeeeecccCCCCCCC-C-------hhHHHHHHHhCCEEecccCCCccEEEecCCC--------CHHHHHHH
Q 002143 867 RKILA-GCRIVFSRVFPVGEANPH-L-------HPLWQTAEQFGAVCTKHIDDQVTHVVANSLG--------TDKVNWAL 929 (960)
Q Consensus 867 rqILk-GcvIvFSG~fP~~~~npe-~-------~~LwklAe~LGAtVssdVd~kVTHLVAss~g--------T~Kv~~Al 929 (960)
|++|+ +++|+|-..-+. ..+.. . ..+.+.+..+||.+..-++.+|||||+..+- ++-+..|.
T Consensus 56 Rkifk~~~vfYFDt~~~~-~~~~~~k~kl~K~~~llkr~f~~LGA~I~~FFd~~VTiVIT~R~i~~~~~~~~~Dil~~A~ 134 (160)
T 3qbz_A 56 KKIMKRDSRIYFDITDDV-EMNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAK 134 (160)
T ss_dssp HHHHHHHCEEEECCCCSS-CCCHHHHHHHHHHHHHHHHHHHTTTCEEESSCCTTCCEEEESSCSSCGGGSCTTSHHHHHH
T ss_pred HHhCccCcEEEecCCChh-hhhHHHHHHHHHHHHHHHHHHHHcCCEeeeeccCCeEEEEecCcCcccccCCchhHHHHHH
Confidence 56898 899999865221 00000 0 1122456799999999999999999998632 33477888
Q ss_pred hCCCcEEcHHHHH
Q 002143 930 STGRFVVHPGWVE 942 (960)
Q Consensus 930 k~GI~IVSpdWLe 942 (960)
+.+++|=+.+=+.
T Consensus 135 ~~~mKVW~yeK~~ 147 (160)
T 3qbz_A 135 KNYMKVWSYEKAA 147 (160)
T ss_dssp HTTCEEEEHHHHH
T ss_pred HcCceecchHHHH
Confidence 8899886665443
No 95
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=92.34 E-value=0.17 Score=48.16 Aligned_cols=26 Identities=8% Similarity=0.213 Sum_probs=24.2
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCC
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMG 724 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAg 724 (960)
+.+.||+.++|++|.+.|.+.|.|++
T Consensus 68 ~~~~pg~~e~L~~L~~~~~~~i~T~~ 93 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNEHYDIYIATAA 93 (180)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEECC
T ss_pred CCCCcCHHHHHHHHHhcCCEEEEeCC
Confidence 57889999999999988999999998
No 96
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=92.29 E-value=0.13 Score=52.01 Aligned_cols=102 Identities=16% Similarity=0.189 Sum_probs=63.4
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcCCc
Q 002143 647 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMGN 725 (960)
Q Consensus 647 LTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTAgt 725 (960)
..+|+||||||+.+... +.. . ...+ ....+++++ +|++|.+ -+.+.|.|+..
T Consensus 50 k~viFDlDGTL~Ds~~~--~~~------------~-----~~~~------~~~~~~d~~--~L~~L~~~G~~l~I~T~~~ 102 (211)
T 3ij5_A 50 RLLICDVDGVMSDGLIY--MGN------------Q-----GEEL------KAFNVRDGY--GIRCLITSDIDVAIITGRR 102 (211)
T ss_dssp SEEEECCTTTTSSSEEE--EET------------T-----SCEE------EEEEHHHHH--HHHHHHHTTCEEEEECSSC
T ss_pred CEEEEeCCCCEECCHHH--Hhh------------h-----hHHH------HHhccchHH--HHHHHHHCCCEEEEEeCCC
Confidence 57999999999988521 000 0 0000 112234444 8888876 49999999999
Q ss_pred HHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCCCCcc
Q 002143 726 KLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRVW 789 (960)
Q Consensus 726 reYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDsp~vw 789 (960)
...|..+++.+.-.. +|... .+ ++ ..++.+...+|.+ +.++.|-|+..=.
T Consensus 103 ~~~~~~~l~~lgi~~-~f~~~---k~------K~----~~l~~~~~~lg~~~~~~~~vGDs~nDi 153 (211)
T 3ij5_A 103 AKLLEDRANTLGITH-LYQGQ---SD------KL----VAYHELLATLQCQPEQVAYIGDDLIDW 153 (211)
T ss_dssp CHHHHHHHHHHTCCE-EECSC---SS------HH----HHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHHHHcCCch-hhccc---CC------hH----HHHHHHHHHcCcCcceEEEEcCCHHHH
Confidence 999999999987543 34321 10 00 1223333345666 7899999987433
No 97
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=92.28 E-value=0.15 Score=47.70 Aligned_cols=84 Identities=18% Similarity=0.158 Sum_probs=58.6
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+..+|++.++|+++.+. +.++|+|++...++..+++.++-.. +|.. +++.++... .+.. . ..++.+-..+|.+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~~ 162 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQG-FFDI-VLSGEEFKE-SKPN-P-EIYLTALKQLNVQA 162 (214)
T ss_dssp HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEGGGCSS-CTTS-S-HHHHHHHHHHTCCG
T ss_pred CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHh-heee-EeecccccC-CCCC-h-HHHHHHHHHcCCCh
Confidence 46899999999999876 9999999999999999999887554 5664 555543321 1110 0 1122222245776
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.++.|+|+..
T Consensus 163 ~~~~~iGD~~~ 173 (214)
T 3e58_A 163 SRALIIEDSEK 173 (214)
T ss_dssp GGEEEEECSHH
T ss_pred HHeEEEeccHh
Confidence 88999999963
No 98
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=92.12 E-value=0.057 Score=53.87 Aligned_cols=66 Identities=15% Similarity=0.102 Sum_probs=43.9
Q ss_pred HHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCC
Q 002143 708 FLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 785 (960)
Q Consensus 708 FLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDs 785 (960)
-|+.+.+. |.++|.|+.....+..+++.|.-.. +|... . -++ ..++.+...+|.+ +.++.|.|+
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-~~~~~--------k-~k~----~~~~~~~~~~~~~~~~~~~vGD~ 125 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL-IYQGQ--------D-DKV----QAYYDICQKLAIAPEQTGYIGDD 125 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-EECSC--------S-SHH----HHHHHHHHHHCCCGGGEEEEESS
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-EeeCC--------C-CcH----HHHHHHHHHhCCCHHHEEEEcCC
Confidence 37888754 9999999999999999999987543 33221 0 000 1223333345666 789999998
Q ss_pred CC
Q 002143 786 VR 787 (960)
Q Consensus 786 p~ 787 (960)
..
T Consensus 126 ~n 127 (195)
T 3n07_A 126 LI 127 (195)
T ss_dssp GG
T ss_pred HH
Confidence 64
No 99
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=91.95 E-value=0.028 Score=56.36 Aligned_cols=37 Identities=8% Similarity=0.004 Sum_probs=31.1
Q ss_pred eccCHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhc
Q 002143 701 LRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLD 737 (960)
Q Consensus 701 LRPgL~EFLeeLSk-~YEIvIyTAgtreYAd~VLdiLD 737 (960)
..|++.++|+++.+ -+.++|.|++...++..+++.|.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~ 126 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLA 126 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHH
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHH
Confidence 57899999999986 49999999999888777777654
No 100
>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*
Probab=91.93 E-value=0.16 Score=52.53 Aligned_cols=87 Identities=10% Similarity=0.138 Sum_probs=55.0
Q ss_pred HHhhhcCceeeeeecccCCCCCCCChhHHHHHHHhCCEEec--ccC--------CCccEEEecCCCCH---HHHHHH--h
Q 002143 866 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTK--HID--------DQVTHVVANSLGTD---KVNWAL--S 930 (960)
Q Consensus 866 RrqILkGcvIvFSG~fP~~~~npe~~~LwklAe~LGAtVss--dVd--------~kVTHLVAss~gT~---Kv~~Al--k 930 (960)
+.++|+|+.|++++-+- ..|....+..+++..||+|.. .+. ..-.+||+...... ++.... .
T Consensus 110 ~~~LF~G~~f~it~~~~---~~p~~~~l~~iI~~~GG~v~~~p~~~~~~~~~~~~~~~~vis~~~d~~~~~~f~~~~~~~ 186 (220)
T 3l41_A 110 GPSLLEDYVVYLTSKTV---APENVPAVISIVKSNGGVCSTLNVYNKRLARHLEDGNVVLITCNEDSHIWTNFLDNASQN 186 (220)
T ss_dssp CSCTTTTSEEEEETTSS---CGGGHHHHHHHHHHTTCEEEEECSCCHHHHHHHHHCCEEEEECGGGHHHHTTTHHHHTTC
T ss_pred CchhhhheeEEEecccc---CCCCCceEEEEEecCCcEechhhHHHHHHHHhcccCCEEEEEeCCcchHHHHhhcccccc
Confidence 46899999999987540 022356789999999999987 111 11246776632111 111111 2
Q ss_pred CCCcEEcHHHHHHHHHhccCCCCCC
Q 002143 931 TGRFVVHPGWVEASALLYRRANEQD 955 (960)
Q Consensus 931 ~GI~IVSpdWLedC~~~wkRvDEs~ 955 (960)
.++.||+++||..|+.+.+.--|..
T Consensus 187 ~~~~i~~~e~ll~~il~q~l~~~~~ 211 (220)
T 3l41_A 187 KTIFLQNYDWLIKTVLRQEIDVNDR 211 (220)
T ss_dssp TTEEEEEHHHHHHHHHHTCCCTTCC
T ss_pred ceEEEechhHHHHHHHHHHcCcchH
Confidence 3567999999999998765444433
No 101
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=91.81 E-value=0.19 Score=49.09 Aligned_cols=84 Identities=24% Similarity=0.315 Sum_probs=58.0
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+.+.|++.++|+++.+. |.++|.|++.+.++..+++.++-.. +|.. +++.+++.. .+.. ...+.+=++ .+|.+
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~-~f~~-i~~~~~~~~-~Kp~-~~~~~~~~~-~~~~~~ 156 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSG-YFDL-IVGGDTFGE-KKPS-PTPVLKTLE-ILGEEP 156 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSE-EECTTSSCT-TCCT-THHHHHHHH-HHTCCG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHH-HheE-EEecCcCCC-CCCC-hHHHHHHHH-HhCCCc
Confidence 67899999999999875 9999999999999999999887543 5664 555443221 1110 111222222 45766
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|+|+|+..
T Consensus 157 ~~~~~vGD~~~ 167 (222)
T 2nyv_A 157 EKALIVGDTDA 167 (222)
T ss_dssp GGEEEEESSHH
T ss_pred hhEEEECCCHH
Confidence 88999999953
No 102
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=91.65 E-value=0.32 Score=47.32 Aligned_cols=63 Identities=16% Similarity=0.221 Sum_probs=47.4
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcCC
Q 002143 646 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMG 724 (960)
Q Consensus 646 KLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTAg 724 (960)
.+.+++||||||+.... +. + ...-|++.+.|+++.+ -+.++|+|.-
T Consensus 3 ~k~i~~DlDGTL~~~~~-----~~---i-------------------------~~~~~~~~~al~~l~~~G~~iii~TgR 49 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHRY-----PR---I-------------------------GEEIPFAVETLKLLQQEKHRLILWSVR 49 (142)
T ss_dssp CCEEEECCBTTTBCSCT-----TS---C-------------------------CCBCTTHHHHHHHHHHTTCEEEECCSC
T ss_pred CeEEEEECcCCCCCCCC-----cc---c-------------------------cccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999998531 00 0 0134788999999975 4999999998
Q ss_pred cHHHHHHHHHHhcCCCc
Q 002143 725 NKLYATEMAKVLDPKGV 741 (960)
Q Consensus 725 treYAd~VLdiLDP~g~ 741 (960)
.......+++.|+..|.
T Consensus 50 ~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 50 EGELLDEAIEWCRARGL 66 (142)
T ss_dssp CHHHHHHHHHHHHTTTC
T ss_pred CcccHHHHHHHHHHcCC
Confidence 87777788888887763
No 103
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=91.47 E-value=0.2 Score=49.71 Aligned_cols=84 Identities=14% Similarity=0.188 Sum_probs=57.7
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+.++|++.++|+++.+. |.++|.|++...++..+++.+.-.. +|.. +++.+++.. .+.. . ..++.+-..+|.+
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~-~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~~~~~~~ 187 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH-LFSE-MLGGQSLPE-IKPH-P-APFYYLCGKFGLYP 187 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSE-EECTTTSSS-CTTS-S-HHHHHHHHHHTCCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchh-eEEE-EEecccCCC-CCcC-H-HHHHHHHHHhCcCh
Confidence 57889999999999865 9999999999999999999886543 5654 555443321 1110 0 0112222245766
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|+|+|+..
T Consensus 188 ~~~~~vGD~~~ 198 (243)
T 2hsz_A 188 KQILFVGDSQN 198 (243)
T ss_dssp GGEEEEESSHH
T ss_pred hhEEEEcCCHH
Confidence 88999999963
No 104
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=91.46 E-value=0.076 Score=52.24 Aligned_cols=66 Identities=14% Similarity=0.178 Sum_probs=44.1
Q ss_pred HHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCC
Q 002143 708 FLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDS 785 (960)
Q Consensus 708 FLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDs 785 (960)
-|++|.+. |.++|.|+.....+..+++.+.-.. +|.. + .. ++ ..++.+-..+|.+ +.+++|.|+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-~~~~-~--kp------k~----~~~~~~~~~~~~~~~~~~~vGD~ 119 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-YYKG-Q--VD------KR----SAYQHLKKTLGLNDDEFAYIGDD 119 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-EECS-C--SS------CH----HHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-ceeC-C--CC------hH----HHHHHHHHHhCCCHHHEEEECCC
Confidence 37888764 9999999999999999999887543 3332 1 00 11 1222222245666 789999999
Q ss_pred CC
Q 002143 786 VR 787 (960)
Q Consensus 786 p~ 787 (960)
..
T Consensus 120 ~~ 121 (191)
T 3n1u_A 120 LP 121 (191)
T ss_dssp GG
T ss_pred HH
Confidence 74
No 105
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=91.37 E-value=0.19 Score=48.08 Aligned_cols=84 Identities=20% Similarity=0.126 Sum_probs=58.5
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+...|++.+||+++.+. +.++|+|++...++..+++.+.-.. +|.. +++.++... .+.. . ..++.+-..+|.+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~l~~~~ 164 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI-NKIN-IVTRDDVSY-GKPD-P-DLFLAAAKKIGAPI 164 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT-TSSC-EECGGGSSC-CTTS-T-HHHHHHHHHTTCCG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh-hhhe-eeccccCCC-CCCC-h-HHHHHHHHHhCCCH
Confidence 67899999999999876 9999999999999999999876554 4654 444443211 1110 0 1122232356776
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|+|+|+..
T Consensus 165 ~~~i~iGD~~~ 175 (233)
T 3s6j_A 165 DECLVIGDAIW 175 (233)
T ss_dssp GGEEEEESSHH
T ss_pred HHEEEEeCCHH
Confidence 88999999974
No 106
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=91.06 E-value=0.19 Score=48.29 Aligned_cols=84 Identities=13% Similarity=0.165 Sum_probs=58.3
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+...|++.++|+.+.+. |.++|+|++...++..+++.++-.. +|.. +++.+++.. .+.. ...+.+=+. .+|.+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~~~~~~~~~-~~~~~~ 172 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSG-LFDH-VLSVDAVRL-YKTA-PAAYALAPR-AFGVPA 172 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTT-TCSE-EEEGGGTTC-CTTS-HHHHTHHHH-HHTSCG
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHh-hcCE-EEEecccCC-CCcC-HHHHHHHHH-HhCCCc
Confidence 56789999999999876 9999999999999999999877654 5654 555543321 1110 001222222 45766
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|+|+|+..
T Consensus 173 ~~~~~vGD~~~ 183 (233)
T 3umb_A 173 AQILFVSSNGW 183 (233)
T ss_dssp GGEEEEESCHH
T ss_pred ccEEEEeCCHH
Confidence 88999999963
No 107
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=90.96 E-value=0.16 Score=48.49 Aligned_cols=84 Identities=18% Similarity=0.113 Sum_probs=57.4
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
+.+.|++.++|+.+.+.|.++|.|++...++..+++.+.-.. +|.. +++.+++. ..+.+ . ..++-+-..+|.+ +
T Consensus 82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~-~~KP~-~-~~~~~~~~~~~~~~~ 156 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMM-RMAV-TISADDTP-KRKPD-P-LPLLTALEKVNVAPQ 156 (209)
T ss_dssp CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGG-GEEE-EECGGGSS-CCTTS-S-HHHHHHHHHTTCCGG
T ss_pred CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHh-hccE-EEecCcCC-CCCCC-c-HHHHHHHHHcCCCcc
Confidence 578999999999998669999999999999999998775443 5664 55444332 11110 0 1112222245766 8
Q ss_pred cEEEEcCCCC
Q 002143 778 AVVIIDDSVR 787 (960)
Q Consensus 778 ~VVIVDDsp~ 787 (960)
.+|.|+|+..
T Consensus 157 ~~i~vGD~~~ 166 (209)
T 2hdo_A 157 NALFIGDSVS 166 (209)
T ss_dssp GEEEEESSHH
T ss_pred cEEEECCChh
Confidence 8999999964
No 108
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=90.80 E-value=0.23 Score=47.60 Aligned_cols=83 Identities=17% Similarity=0.146 Sum_probs=58.2
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
+.+.|++.++|+++.+.|.++|+|++...++..+++.+.-.. +|.. +++.+++.. .+.. ...+.+=++ .+|.+ +
T Consensus 106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~~~~~~~~~-~lgi~~~ 180 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDR-YFKK-IILSEDLGV-LKPR-PEIFHFALS-ATQSELR 180 (240)
T ss_dssp CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGG-GCSE-EEEGGGTTC-CTTS-HHHHHHHHH-HTTCCGG
T ss_pred CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHh-hcee-EEEeccCCC-CCCC-HHHHHHHHH-HcCCCcc
Confidence 567999999999999889999999999999999999887554 5664 555443321 1110 001212222 46776 8
Q ss_pred cEEEEcCCC
Q 002143 778 AVVIIDDSV 786 (960)
Q Consensus 778 ~VVIVDDsp 786 (960)
.+|+|+|++
T Consensus 181 ~~~~iGD~~ 189 (240)
T 3qnm_A 181 ESLMIGDSW 189 (240)
T ss_dssp GEEEEESCT
T ss_pred cEEEECCCc
Confidence 999999995
No 109
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=90.62 E-value=0.25 Score=47.37 Aligned_cols=83 Identities=14% Similarity=0.154 Sum_probs=58.1
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccC-CC-
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLG-ME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLG-rd- 776 (960)
+...|++.++|+.+.+.|.++|.|++...++..+++.++-.. +|.. +++.+++.. .+.. . ..++-+-..+| .+
T Consensus 102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~g~~~~ 176 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFP-FFKD-IFVSEDTGF-QKPM-K-EYFNYVFERIPQFSA 176 (238)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGG-GCSE-EEEGGGTTS-CTTC-H-HHHHHHHHTSTTCCG
T ss_pred CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHh-hhhe-EEEecccCC-CCCC-h-HHHHHHHHHcCCCCh
Confidence 568899999999998779999999999999999999886544 5664 554443321 1110 0 01122223567 66
Q ss_pred CcEEEEcCCC
Q 002143 777 SAVVIIDDSV 786 (960)
Q Consensus 777 s~VVIVDDsp 786 (960)
+.+|+|+|+.
T Consensus 177 ~~~i~vGD~~ 186 (238)
T 3ed5_A 177 EHTLIIGDSL 186 (238)
T ss_dssp GGEEEEESCT
T ss_pred hHeEEECCCc
Confidence 8999999996
No 110
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=90.47 E-value=0.26 Score=47.65 Aligned_cols=84 Identities=19% Similarity=0.189 Sum_probs=58.1
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+.+.|++.++|+.+.+. +.++|+|++...+++.+++.++-.. +|.. +++.+++.. .+.. . ..++-+-..+|.+
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~lg~~~ 177 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDT-RLTV-IAGDDSVER-GKPH-P-DMALHVARGLGIPP 177 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGG-TCSE-EECTTTSSS-CTTS-S-HHHHHHHHHHTCCG
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchh-heee-EEeCCCCCC-CCCC-H-HHHHHHHHHcCCCH
Confidence 45799999999999875 9999999999999999999886543 5654 554443211 1110 0 1122232346777
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|+|+|+..
T Consensus 178 ~~~i~vGD~~~ 188 (237)
T 4ex6_A 178 ERCVVIGDGVP 188 (237)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEEcCCHH
Confidence 88999999973
No 111
>3oq0_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.70A {Saccharomyces cerevisiae}
Probab=90.14 E-value=0.44 Score=47.31 Aligned_cols=81 Identities=21% Similarity=0.053 Sum_probs=54.1
Q ss_pred HHhhh-cCceeeeeecccCCCCCCC--------ChhHHHHHHHhCCEEecccCCCccEEEecCC--------CCHHHHHH
Q 002143 866 QRKIL-AGCRIVFSRVFPVGEANPH--------LHPLWQTAEQFGAVCTKHIDDQVTHVVANSL--------GTDKVNWA 928 (960)
Q Consensus 866 RrqIL-kGcvIvFSG~fP~~~~npe--------~~~LwklAe~LGAtVssdVd~kVTHLVAss~--------gT~Kv~~A 928 (960)
-|+|+ ++.+|+|-..-... .+.. +..|.+.+..+||+|..-|+..|||||+... .++=+..|
T Consensus 17 WrkIM~r~s~iYFdt~~~~~-~~~~~~~~l~k~~~llkk~f~~LGa~I~~FFd~~VTiIITrR~~~~~~~yp~~DIL~rA 95 (151)
T 3oq0_A 17 RGSHMKRDSRIYFDITDDVE-MNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRA 95 (151)
T ss_dssp ----CCCCCEEEECCCCSSC-CCHHHHHHHHHHHHHHHHHHHHHTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHH
T ss_pred HHHHhccCCEEEEeCCCcch-hhHHHHHHHHHHHHHHHHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHH
Confidence 35677 88899987531110 0000 0124456789999999999999999999863 34456789
Q ss_pred HhCCCcEEcHHHHHHHHHh
Q 002143 929 LSTGRFVVHPGWVEASALL 947 (960)
Q Consensus 929 lk~GI~IVSpdWLedC~~~ 947 (960)
.+.|++|=+.+=+..-+..
T Consensus 96 r~~~mKIWs~EKl~RfL~~ 114 (151)
T 3oq0_A 96 KKNYMKVWSYEKAARFLKN 114 (151)
T ss_dssp HHTTCEEEEHHHHHHHHHT
T ss_pred HHcCCeeecHHHHHHHHHh
Confidence 9999999888877655443
No 112
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=89.95 E-value=0.2 Score=49.16 Aligned_cols=83 Identities=22% Similarity=0.277 Sum_probs=57.2
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+...|++.++|+++.+. |.++|.|++...++..+++.++-.. +|.. +++.+++.. .+.. ...+.+=++ .+|.+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~Kp~-~~~~~~~~~-~~g~~~ 167 (241)
T 2hoq_A 93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDD-FFEH-VIISDFEGV-KKPH-PKIFKKALK-AFNVKP 167 (241)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGG-GCSE-EEEGGGGTC-CTTC-HHHHHHHHH-HHTCCG
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHh-hccE-EEEeCCCCC-CCCC-HHHHHHHHH-HcCCCc
Confidence 45789999999999875 9999999999999999999887554 5764 554443221 1110 001112222 45766
Q ss_pred CcEEEEcCCC
Q 002143 777 SAVVIIDDSV 786 (960)
Q Consensus 777 s~VVIVDDsp 786 (960)
+.+|+|+|+.
T Consensus 168 ~~~i~iGD~~ 177 (241)
T 2hoq_A 168 EEALMVGDRL 177 (241)
T ss_dssp GGEEEEESCT
T ss_pred ccEEEECCCc
Confidence 8899999997
No 113
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=89.77 E-value=0.44 Score=52.23 Aligned_cols=56 Identities=21% Similarity=0.300 Sum_probs=44.1
Q ss_pred CCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEc
Q 002143 644 ARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYT 722 (960)
Q Consensus 644 ~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyT 722 (960)
.++..+++||||||++... .=|+..+||+.+.+ -+.+++.|
T Consensus 11 ~~~~~~l~D~DGvl~~g~~--------------------------------------~~p~a~~~l~~l~~~g~~~~~vT 52 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFRGKK--------------------------------------PIAGASDALKLLNRNKIPYILLT 52 (352)
T ss_dssp -CCEEEEECCBTTTEETTE--------------------------------------ECTTHHHHHHHHHHTTCCEEEEC
T ss_pred ccCCEEEEECCCeeEcCCe--------------------------------------eCcCHHHHHHHHHHCCCEEEEEe
Confidence 3688999999999998631 12889999999985 48899999
Q ss_pred CCc----HHHHHHHHHHhc
Q 002143 723 MGN----KLYATEMAKVLD 737 (960)
Q Consensus 723 Agt----reYAd~VLdiLD 737 (960)
++. +.||+.+.+.|.
T Consensus 53 Nn~~~~~~~~~~~l~~~lg 71 (352)
T 3kc2_A 53 NGGGFSERARTEFISSKLD 71 (352)
T ss_dssp SCCSSCHHHHHHHHHHHHT
T ss_pred CCCCCCchHHHHHHHHhcC
Confidence 875 788888876554
No 114
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=89.74 E-value=0.16 Score=50.24 Aligned_cols=86 Identities=14% Similarity=0.005 Sum_probs=58.8
Q ss_pred EeeccCHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk-~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+...|++.++|+++.+ .|.++|+|++...++..+++.++-.. +|..++++.++.....+.. . ..++-+-..+|.+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~i~~~~~~~~~~Kp~-~-~~~~~~~~~lgi~~ 185 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE-LAGEHIYDPSWVGGRGKPH-P-DLYTFAAQQLGILP 185 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH-HHCSCEECGGGGTTCCTTS-S-HHHHHHHHHTTCCG
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh-hccceEEeHhhcCcCCCCC-h-HHHHHHHHHcCCCH
Confidence 5789999999999987 59999999999999999999876543 5665355444321011110 0 1122222246776
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|+|+|+..
T Consensus 186 ~~~i~iGD~~~ 196 (259)
T 4eek_A 186 ERCVVIEDSVT 196 (259)
T ss_dssp GGEEEEESSHH
T ss_pred HHEEEEcCCHH
Confidence 88999999974
No 115
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=89.63 E-value=0.17 Score=51.34 Aligned_cols=82 Identities=16% Similarity=0.227 Sum_probs=57.9
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
+.+.||+.++|+++.+.|.++|.|++.+.++..+++.++-.. +|.. +++.+++.. .+.+ ...+.+=+. .+|.+ +
T Consensus 120 ~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~f~~-i~~~~~~~~-~KP~-p~~~~~~~~-~~~~~~~ 194 (260)
T 2gfh_A 120 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQS-YFDA-IVIGGEQKE-EKPA-PSIFYHCCD-LLGVQPG 194 (260)
T ss_dssp CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGG-GCSE-EEEGGGSSS-CTTC-HHHHHHHHH-HHTCCGG
T ss_pred CCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHh-hhhe-EEecCCCCC-CCCC-HHHHHHHHH-HcCCChh
Confidence 467899999999999889999999999999999999987654 6765 554443321 1110 011223333 35766 8
Q ss_pred cEEEEcCC
Q 002143 778 AVVIIDDS 785 (960)
Q Consensus 778 ~VVIVDDs 785 (960)
.+|+|+|+
T Consensus 195 ~~~~vGDs 202 (260)
T 2gfh_A 195 DCVMVGDT 202 (260)
T ss_dssp GEEEEESC
T ss_pred hEEEECCC
Confidence 89999995
No 116
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=89.26 E-value=0.41 Score=47.18 Aligned_cols=83 Identities=18% Similarity=0.138 Sum_probs=58.1
Q ss_pred EeeccCHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk-~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+.+.||+.++|+.+.+ .|.+.|.|++.+.++..+++.++.. +|.. +++.+++.. .+.. ...+.+=++ .+|.+
T Consensus 109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~f~~-~~~~~~~~~-~Kp~-p~~~~~~~~-~l~~~~ 182 (240)
T 2hi0_A 109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG--SFDF-ALGEKSGIR-RKPA-PDMTSECVK-VLGVPR 182 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT--TCSE-EEEECTTSC-CTTS-SHHHHHHHH-HHTCCG
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--ceeE-EEecCCCCC-CCCC-HHHHHHHHH-HcCCCH
Confidence 5678999999999975 4999999999999999999988754 5764 565554321 1110 111222233 45766
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|+|.|+..
T Consensus 183 ~~~~~vGDs~~ 193 (240)
T 2hi0_A 183 DKCVYIGDSEI 193 (240)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEEcCCHH
Confidence 89999999963
No 117
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=89.13 E-value=0.49 Score=43.86 Aligned_cols=62 Identities=24% Similarity=0.192 Sum_probs=42.0
Q ss_pred EEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcCCcH
Q 002143 648 CLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMGNK 726 (960)
Q Consensus 648 TLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTAgtr 726 (960)
.+++||||||+++... . +. -+.+.|+..+.|+++.+ -+.++|.|....
T Consensus 3 ~i~~DlDGTL~~~~~~----~-----~~----------------------~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 3 KLIVDLDGTLTQANTS----D-----YR----------------------NVLPRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp EEEECSTTTTBCCCCS----C-----GG----------------------GCCBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred EEEEecCCCCCCCCCC----c-----cc----------------------cCCCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 6899999999986420 0 00 01245778888888864 589999997654
Q ss_pred HH------------HHHHHHHhcCCC
Q 002143 727 LY------------ATEMAKVLDPKG 740 (960)
Q Consensus 727 eY------------Ad~VLdiLDP~g 740 (960)
.. +..|++++...+
T Consensus 52 ~~~nG~~~~~~~~~~~~i~~~~~~~~ 77 (126)
T 1xpj_A 52 RTYEGNVGKINIHTLPIITEWLDKHQ 77 (126)
T ss_dssp TTTTTCHHHHHHHTHHHHHHHHHHTT
T ss_pred hhccccccccCHHHHHHHHHHHHHcC
Confidence 32 567888776655
No 118
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=89.13 E-value=0.19 Score=48.63 Aligned_cols=82 Identities=22% Similarity=0.270 Sum_probs=58.3
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
+.+.||+.++|+.+.+.|.+.|.|++.+.++..+++.++-.. +|.. +++.+ . ..+.. ...+.+=++ .+|.+ +
T Consensus 83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~-~f~~-i~~~~--~-~~Kp~-p~~~~~~~~-~lg~~p~ 155 (210)
T 2ah5_A 83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHH-FFDG-IYGSS--P-EAPHK-ADVIHQALQ-THQLAPE 155 (210)
T ss_dssp CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGG-GCSE-EEEEC--S-SCCSH-HHHHHHHHH-HTTCCGG
T ss_pred CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchh-heee-eecCC--C-CCCCC-hHHHHHHHH-HcCCCcc
Confidence 567899999999998889999999999999999999887654 6764 55443 1 11110 012333333 46776 8
Q ss_pred cEEEEcCCCC
Q 002143 778 AVVIIDDSVR 787 (960)
Q Consensus 778 ~VVIVDDsp~ 787 (960)
.+|+|+|+..
T Consensus 156 ~~~~vgDs~~ 165 (210)
T 2ah5_A 156 QAIIIGDTKF 165 (210)
T ss_dssp GEEEEESSHH
T ss_pred cEEEECCCHH
Confidence 8999999963
No 119
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=88.77 E-value=0.2 Score=47.90 Aligned_cols=84 Identities=14% Similarity=0.243 Sum_probs=58.5
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+.+.|++.++|+.+.+. |.++|+|++...+++.+++.++-.. +|.. +++.+.... .+.. . ..++-+-..+|.+
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~ 159 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAF-YFDA-IVGSSLDGK-LSTK-E-DVIRYAMESLNIKS 159 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSE-EEEECTTSS-SCSH-H-HHHHHHHHHHTCCG
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHh-heee-eeccCCCCC-CCCC-H-HHHHHHHHHhCcCc
Confidence 56899999999999876 9999999999999999999887554 5664 555443221 1100 0 0122222245776
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|+|+|+..
T Consensus 160 ~~~i~iGD~~~ 170 (226)
T 3mc1_A 160 DDAIMIGDREY 170 (226)
T ss_dssp GGEEEEESSHH
T ss_pred ccEEEECCCHH
Confidence 89999999963
No 120
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=88.57 E-value=0.63 Score=46.34 Aligned_cols=57 Identities=16% Similarity=0.221 Sum_probs=42.2
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhh-cceEEEEEcCCc
Q 002143 647 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMGN 725 (960)
Q Consensus 647 LTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLS-k~YEIvIyTAgt 725 (960)
+.+++||||||+++.. . +.|...+.|+++. +-..++|.|.-.
T Consensus 4 kli~~DlDGTLl~~~~--~-----------------------------------i~~~~~~al~~l~~~G~~v~i~TGR~ 46 (231)
T 1wr8_A 4 KAISIDIDGTITYPNR--M-----------------------------------IHEKALEAIRRAESLGIPIMLVTGNT 46 (231)
T ss_dssp CEEEEESTTTTBCTTS--C-----------------------------------BCHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred eEEEEECCCCCCCCCC--c-----------------------------------CCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 4689999999998742 0 2344567777775 357889999888
Q ss_pred HHHHHHHHHHhcCCC
Q 002143 726 KLYATEMAKVLDPKG 740 (960)
Q Consensus 726 reYAd~VLdiLDP~g 740 (960)
...+..+++.|....
T Consensus 47 ~~~~~~~~~~l~~~~ 61 (231)
T 1wr8_A 47 VQFAEAASILIGTSG 61 (231)
T ss_dssp HHHHHHHHHHHTCCS
T ss_pred hhHHHHHHHHcCCCC
Confidence 888888888887543
No 121
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=88.49 E-value=0.44 Score=47.98 Aligned_cols=57 Identities=14% Similarity=0.115 Sum_probs=45.2
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcCCc
Q 002143 647 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMGN 725 (960)
Q Consensus 647 LTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTAgt 725 (960)
+.+++||||||++... .+.|...+.|+++.+ -+.++|.|.-.
T Consensus 6 kli~~DlDGTLl~~~~-------------------------------------~i~~~~~~~l~~l~~~g~~~~i~TGr~ 48 (227)
T 1l6r_A 6 RLAAIDVDGNLTDRDR-------------------------------------LISTKAIESIRSAEKKGLTVSLLSGNV 48 (227)
T ss_dssp CEEEEEHHHHSBCTTS-------------------------------------CBCHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEEECCCCCcCCCC-------------------------------------cCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4799999999997631 034567788998875 48999999999
Q ss_pred HHHHHHHHHHhcCCC
Q 002143 726 KLYATEMAKVLDPKG 740 (960)
Q Consensus 726 reYAd~VLdiLDP~g 740 (960)
...+..+++.|+..+
T Consensus 49 ~~~~~~~~~~l~~~~ 63 (227)
T 1l6r_A 49 IPVVYALKIFLGING 63 (227)
T ss_dssp HHHHHHHHHHHTCCS
T ss_pred cHHHHHHHHHhCCCC
Confidence 999999998887654
No 122
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=88.11 E-value=0.86 Score=42.75 Aligned_cols=87 Identities=20% Similarity=0.221 Sum_probs=57.8
Q ss_pred eeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCC-Cceeeeeeee-cCCCC---CCCCCCCCCCccccCCccc
Q 002143 700 KLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPK-GVLFAGRVIS-RGDDG---DPFDGDERVPKSKDLEGVL 773 (960)
Q Consensus 700 kLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~-g~lF~~RIyS-Rddc~---~~~dGder~~yiKDLsrVL 773 (960)
.++|++.++|+.+.+. +.++|.|++...++..+++.++-. ..+|...++. .+.+. .... -....+.+-|...+
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~ 160 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSN-GACDSKLSAFDKAK 160 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTT-STTTCHHHHHHHHG
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCC-CCcccHHHHHHHHh
Confidence 3789999999999875 999999999999999999988754 2355543332 22110 0000 00113445555455
Q ss_pred CCC-CcEEEEcCCCC
Q 002143 774 GME-SAVVIIDDSVR 787 (960)
Q Consensus 774 Grd-s~VVIVDDsp~ 787 (960)
|.+ +.+++|.|+..
T Consensus 161 ~~~~~~~~~vGD~~~ 175 (219)
T 3kd3_A 161 GLIDGEVIAIGDGYT 175 (219)
T ss_dssp GGCCSEEEEEESSHH
T ss_pred CCCCCCEEEEECCHh
Confidence 765 88999999963
No 123
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=88.09 E-value=0.39 Score=46.38 Aligned_cols=83 Identities=11% Similarity=0.123 Sum_probs=56.4
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+.+.|++.++|+++.+. |.++|.|++...++..+++.++-.. +|.. +++.+++.. .+.. ...+.+=++ .+|.+
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~Kp~-~~~~~~~~~-~~~~~~ 168 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD-GFDH-LLSVDPVQV-YKPD-NRVYELAEQ-ALGLDR 168 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEESGGGTC-CTTS-HHHHHHHHH-HHTSCG
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHh-hhhe-EEEecccCC-CCCC-HHHHHHHHH-HcCCCc
Confidence 46789999999999865 9999999999999999999877543 5654 554443211 1110 001112222 45666
Q ss_pred CcEEEEcCCC
Q 002143 777 SAVVIIDDSV 786 (960)
Q Consensus 777 s~VVIVDDsp 786 (960)
+.+|+|+|+.
T Consensus 169 ~~~~~iGD~~ 178 (232)
T 1zrn_A 169 SAILFVASNA 178 (232)
T ss_dssp GGEEEEESCH
T ss_pred ccEEEEeCCH
Confidence 7899999986
No 124
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=87.87 E-value=0.56 Score=44.25 Aligned_cols=84 Identities=17% Similarity=0.174 Sum_probs=57.1
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+...|++.++|+.+.+. +.++|+|++...++..+++.++-.. +|.. +++.++... .+.. . ..++.+...+|.+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~i~~ 167 (226)
T 1te2_A 93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD-SFDA-LASAEKLPY-SKPH-P-QVYLDCAAKLGVDP 167 (226)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEECTTSSC-CTTS-T-HHHHHHHHHHTSCG
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHh-hCcE-EEeccccCC-CCCC-h-HHHHHHHHHcCCCH
Confidence 46789999999999865 9999999999999999999876543 5654 444333211 1100 0 1122232345776
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|.|+|+..
T Consensus 168 ~~~i~iGD~~n 178 (226)
T 1te2_A 168 LTCVALEDSVN 178 (226)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEEeCCHH
Confidence 88999999974
No 125
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=87.82 E-value=0.4 Score=46.78 Aligned_cols=83 Identities=14% Similarity=0.157 Sum_probs=56.6
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+.++|++.++|+++.+. |.++|.|++...++..+++.++-.. +|.. +++.++... .+.. ...+.+=++ .+|.+
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~Kp~-~~~~~~~~~-~~~~~~ 178 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDR-VLDS-CLSADDLKI-YKPD-PRIYQFACD-RLGVNP 178 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEGGGTTC-CTTS-HHHHHHHHH-HHTCCG
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHH-HcCE-EEEccccCC-CCCC-HHHHHHHHH-HcCCCc
Confidence 46779999999999865 9999999999999999999876544 5654 555443221 1110 001212222 45766
Q ss_pred CcEEEEcCCC
Q 002143 777 SAVVIIDDSV 786 (960)
Q Consensus 777 s~VVIVDDsp 786 (960)
+.+|+|+|+.
T Consensus 179 ~~~~~iGD~~ 188 (240)
T 2no4_A 179 NEVCFVSSNA 188 (240)
T ss_dssp GGEEEEESCH
T ss_pred ccEEEEeCCH
Confidence 8899999986
No 126
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=87.74 E-value=0.36 Score=46.31 Aligned_cols=85 Identities=19% Similarity=0.117 Sum_probs=56.3
Q ss_pred EeeccCHHHHHHHhhcc--eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccC--
Q 002143 699 TKLRPGIWTFLERASKL--FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLG-- 774 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~--YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLG-- 774 (960)
+...|++.++|+.+.+. +.++|+|++...++..+++.++-.. +|.. ++..++... .+.-.....+-+...+|
T Consensus 92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~--~~k~~~~~~~~~~~~lg~~ 167 (234)
T 2hcf_A 92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH-YFPF-GAFADDALD--RNELPHIALERARRMTGAN 167 (234)
T ss_dssp EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST-TCSC-EECTTTCSS--GGGHHHHHHHHHHHHHCCC
T ss_pred CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchh-hcCc-ceecCCCcC--ccchHHHHHHHHHHHhCCC
Confidence 67889999999999976 9999999999999999999887655 5654 232222110 00000000111222457
Q ss_pred CC-CcEEEEcCCCC
Q 002143 775 ME-SAVVIIDDSVR 787 (960)
Q Consensus 775 rd-s~VVIVDDsp~ 787 (960)
.+ +.+|+|+|+..
T Consensus 168 ~~~~~~i~iGD~~~ 181 (234)
T 2hcf_A 168 YSPSQIVIIGDTEH 181 (234)
T ss_dssp CCGGGEEEEESSHH
T ss_pred CCcccEEEECCCHH
Confidence 55 88999999974
No 127
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=86.98 E-value=0.86 Score=46.63 Aligned_cols=60 Identities=17% Similarity=0.092 Sum_probs=40.1
Q ss_pred CCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEc
Q 002143 644 ARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYT 722 (960)
Q Consensus 644 ~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyT 722 (960)
.+.+.+++||||||+.+.. .+ -|...+.|+++.+ -+.++|.|
T Consensus 19 ~~~kli~~DlDGTLl~~~~--~i-----------------------------------~~~~~~al~~l~~~G~~v~iaT 61 (285)
T 3pgv_A 19 GMYQVVASDLDGTLLSPDH--FL-----------------------------------TPYAKETLKLLTARGINFVFAT 61 (285)
T ss_dssp --CCEEEEECCCCCSCTTS--CC-----------------------------------CHHHHHHHHHHHTTTCEEEEEC
T ss_pred CcceEEEEeCcCCCCCCCC--cC-----------------------------------CHHHHHHHHHHHHCCCEEEEEc
Confidence 4567899999999998742 11 2234456666653 47788888
Q ss_pred CCcHHHHHHHHHHhcCCC
Q 002143 723 MGNKLYATEMAKVLDPKG 740 (960)
Q Consensus 723 AgtreYAd~VLdiLDP~g 740 (960)
--...-+..+++.|....
T Consensus 62 GR~~~~~~~~~~~l~~~~ 79 (285)
T 3pgv_A 62 GRHYIDVGQIRDNLGIRS 79 (285)
T ss_dssp SSCGGGGHHHHHHHCSCC
T ss_pred CCCHHHHHHHHHhcCCCc
Confidence 777777777777777654
No 128
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=86.90 E-value=0.73 Score=42.58 Aligned_cols=83 Identities=17% Similarity=0.152 Sum_probs=55.8
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+..+|++.++|+.+.+. +.++|+|++...++. +++.++-.. +|.. ++..++.. ..+.. . ...+.+-..+|.+
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~-~f~~-~~~~~~~~-~~Kp~-~-~~~~~~~~~~~i~~ 157 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVES-YFTE-ILTSQSGF-VRKPS-P-EAATYLLDKYQLNS 157 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGG-GEEE-EECGGGCC-CCTTS-S-HHHHHHHHHHTCCG
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchh-heee-EEecCcCC-CCCCC-c-HHHHHHHHHhCCCc
Confidence 56799999999999875 999999999999999 888886544 5654 44433221 11100 0 1122222245766
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.++.|+|+..
T Consensus 158 ~~~~~iGD~~n 168 (207)
T 2go7_A 158 DNTYYIGDRTL 168 (207)
T ss_dssp GGEEEEESSHH
T ss_pred ccEEEECCCHH
Confidence 88999999963
No 129
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.82 E-value=0.5 Score=44.71 Aligned_cols=79 Identities=16% Similarity=0.210 Sum_probs=57.2
Q ss_pred EEeeccCHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCC
Q 002143 698 WTKLRPGIWTFLERASK--LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM 775 (960)
Q Consensus 698 yVkLRPgL~EFLeeLSk--~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGr 775 (960)
.+.+.|++.++|+.+.+ .|.++|+|++...++..+++.+.-.. +|.. ++..... ++ ..++-+-..+|.
T Consensus 103 ~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~~-~~~~~kp----k~----~~~~~~~~~lgi 172 (234)
T 3ddh_A 103 PIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSP-YFDH-IEVMSDK----TE----KEYLRLLSILQI 172 (234)
T ss_dssp CCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGG-GCSE-EEEESCC----SH----HHHHHHHHHHTC
T ss_pred cCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHh-hhhe-eeecCCC----CH----HHHHHHHHHhCC
Confidence 35789999999999987 69999999999999999999877554 5654 4433211 11 122333335677
Q ss_pred C-CcEEEEcCCC
Q 002143 776 E-SAVVIIDDSV 786 (960)
Q Consensus 776 d-s~VVIVDDsp 786 (960)
+ +.+|+|+|+.
T Consensus 173 ~~~~~i~iGD~~ 184 (234)
T 3ddh_A 173 APSELLMVGNSF 184 (234)
T ss_dssp CGGGEEEEESCC
T ss_pred CcceEEEECCCc
Confidence 7 8999999995
No 130
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=86.66 E-value=0.32 Score=46.66 Aligned_cols=83 Identities=17% Similarity=0.206 Sum_probs=57.5
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
+...|++.++|+.+.+.|.++|+|++...++..+++.+.-.. +|.. +++.+++. ..++. . ..++-+-..+|.+ +
T Consensus 99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~~-~~~~~~~~-~~kp~-~-~~~~~~~~~~~~~~~ 173 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKD-LFDS-ITTSEEAG-FFKPH-P-RIFELALKKAGVKGE 173 (234)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEHHHHT-BCTTS-H-HHHHHHHHHHTCCGG
T ss_pred CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHH-Hcce-eEeccccC-CCCcC-H-HHHHHHHHHcCCCch
Confidence 567899999999998779999999999999999999877543 5664 55443321 11110 0 0122222245776 8
Q ss_pred cEEEEcCCC
Q 002143 778 AVVIIDDSV 786 (960)
Q Consensus 778 ~VVIVDDsp 786 (960)
.+++|+|+.
T Consensus 174 ~~~~vGD~~ 182 (234)
T 3u26_A 174 EAVYVGDNP 182 (234)
T ss_dssp GEEEEESCT
T ss_pred hEEEEcCCc
Confidence 999999996
No 131
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=86.45 E-value=1.2 Score=45.84 Aligned_cols=59 Identities=24% Similarity=0.233 Sum_probs=43.4
Q ss_pred CCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcC
Q 002143 645 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 723 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTA 723 (960)
+.+.+++||||||++.... .-|...+.|+++.+ -..++|.|.
T Consensus 8 ~~~li~~DlDGTLl~~~~~-------------------------------------~~~~~~~~l~~l~~~G~~~~iaTG 50 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDSHSY-------------------------------------DWQPAAPWLTRLREANVPVILCSS 50 (275)
T ss_dssp CCEEEEEECTTTTSCSSCC-------------------------------------SCCTTHHHHHHHHHTTCCEEEECS
T ss_pred CceEEEEeCCCCCCCCCCc-------------------------------------CCHHHHHHHHHHHHCCCeEEEEcC
Confidence 4568999999999975310 11334578888865 488999999
Q ss_pred CcHHHHHHHHHHhcCCC
Q 002143 724 GNKLYATEMAKVLDPKG 740 (960)
Q Consensus 724 gtreYAd~VLdiLDP~g 740 (960)
-....+..+++.|...+
T Consensus 51 R~~~~~~~~~~~l~~~~ 67 (275)
T 1xvi_A 51 KTSAEMLYLQKTLGLQG 67 (275)
T ss_dssp SCHHHHHHHHHHTTCTT
T ss_pred CCHHHHHHHHHHcCCCC
Confidence 88888888888876543
No 132
>3oq4_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.40A {Saccharomyces cerevisiae}
Probab=86.27 E-value=1.2 Score=43.60 Aligned_cols=54 Identities=22% Similarity=0.048 Sum_probs=43.2
Q ss_pred HHHHHHHhCCEEecccCCCccEEEecCC--------CCHHHHHHHhCCCcEEcHHHHHHHHH
Q 002143 893 LWQTAEQFGAVCTKHIDDQVTHVVANSL--------GTDKVNWALSTGRFVVHPGWVEASAL 946 (960)
Q Consensus 893 LwklAe~LGAtVssdVd~kVTHLVAss~--------gT~Kv~~Alk~GI~IVSpdWLedC~~ 946 (960)
|.+-+..+||+|..-++..|||+|+... .++=+..|.+.|++|=+.+=+..-+.
T Consensus 35 lk~~f~~LGa~I~~FFd~~VTiiITrR~~~~~~~~p~~DIL~rAr~~~mKIWs~EKl~RfL~ 96 (134)
T 3oq4_A 35 LKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKKNYMKVWSYEKAARFLK 96 (134)
T ss_dssp HHHHHHHTTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHHHHTTCEEEEHHHHHHHHH
T ss_pred HHHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHHHHcCCeeeeHHHHHHHHH
Confidence 5556789999999999999999999863 34446789999999988877765444
No 133
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=85.80 E-value=0.49 Score=46.04 Aligned_cols=84 Identities=14% Similarity=0.142 Sum_probs=57.5
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+.++|++.++|+++.+. +.++|+|++...++..+++.++-.. +|.. +++.+.+.. .+.. . ..++-+...+|.+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~g~~~ 183 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDR-YFKY-IAGSNLDGT-RVNK-N-EVIQYVLDLCNVKD 183 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSE-EEEECTTSC-CCCH-H-HHHHHHHHHHTCCC
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHh-hEEE-EEeccccCC-CCCC-H-HHHHHHHHHcCCCC
Confidence 57899999999999976 9999999999999999999887654 5765 555554321 1100 0 0111122234543
Q ss_pred -CcEEEEcCCCC
Q 002143 777 -SAVVIIDDSVR 787 (960)
Q Consensus 777 -s~VVIVDDsp~ 787 (960)
+.+|+|+|+..
T Consensus 184 ~~~~i~vGD~~~ 195 (240)
T 3sd7_A 184 KDKVIMVGDRKY 195 (240)
T ss_dssp GGGEEEEESSHH
T ss_pred CCcEEEECCCHH
Confidence 68999999963
No 134
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=85.53 E-value=0.64 Score=46.60 Aligned_cols=16 Identities=25% Similarity=0.362 Sum_probs=13.4
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
.+.++|||||||++..
T Consensus 8 ~kli~~DlDGTLl~~~ 23 (268)
T 3qgm_A 8 KKGYIIDIDGVIGKSV 23 (268)
T ss_dssp CSEEEEECBTTTEETT
T ss_pred CCEEEEcCcCcEECCC
Confidence 4579999999999863
No 135
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=84.96 E-value=0.55 Score=48.07 Aligned_cols=83 Identities=11% Similarity=0.121 Sum_probs=57.2
Q ss_pred EeeccCHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhcC--CCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCC
Q 002143 699 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDP--KGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM 775 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk-~YEIvIyTAgtreYAd~VLdiLDP--~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGr 775 (960)
+.+.||+.++|+.+.+ -|.++|+|++...++..+++.++- =..+|.. +++. ++. .+.+ ...|.+=++ .+|.
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~-i~~~-~~~--~KP~-p~~~~~~~~-~lg~ 202 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG-HFDT-KIG--HKVE-SESYRKIAD-SIGC 202 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSE-EECG-GGC--CTTC-HHHHHHHHH-HHTS
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccE-EEec-CCC--CCCC-HHHHHHHHH-HhCc
Confidence 6789999999999975 699999999999999999886541 1236764 5654 332 2211 112333344 4576
Q ss_pred C-CcEEEEcCCCC
Q 002143 776 E-SAVVIIDDSVR 787 (960)
Q Consensus 776 d-s~VVIVDDsp~ 787 (960)
. +.+|+|+|+..
T Consensus 203 ~p~~~l~VgDs~~ 215 (261)
T 1yns_A 203 STNNILFLTDVTR 215 (261)
T ss_dssp CGGGEEEEESCHH
T ss_pred CcccEEEEcCCHH
Confidence 6 89999999953
No 136
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=84.95 E-value=1.1 Score=45.26 Aligned_cols=56 Identities=29% Similarity=0.193 Sum_probs=40.0
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhh-cceEEEEEcCC
Q 002143 646 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMG 724 (960)
Q Consensus 646 KLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLS-k~YEIvIyTAg 724 (960)
.+.+++||||||+.+.. . +-|...+.|+++. +-+.++|.|.-
T Consensus 5 ~kli~fDlDGTLl~~~~--~-----------------------------------i~~~~~~al~~l~~~G~~~~iaTGR 47 (279)
T 4dw8_A 5 YKLIVLDLDGTLTNSKK--E-----------------------------------ISSRNRETLIRIQEQGIRLVLASGR 47 (279)
T ss_dssp CCEEEECCCCCCSCTTS--C-----------------------------------CCHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ceEEEEeCCCCCCCCCC--c-----------------------------------cCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45799999999998742 1 1233456677665 45888898888
Q ss_pred cHHHHHHHHHHhcC
Q 002143 725 NKLYATEMAKVLDP 738 (960)
Q Consensus 725 treYAd~VLdiLDP 738 (960)
...-+..+++.|..
T Consensus 48 ~~~~~~~~~~~l~~ 61 (279)
T 4dw8_A 48 PTYGIVPLANELRM 61 (279)
T ss_dssp CHHHHHHHHHHTTG
T ss_pred ChHHHHHHHHHhCC
Confidence 87778888877764
No 137
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=84.89 E-value=1.2 Score=45.19 Aligned_cols=57 Identities=26% Similarity=0.222 Sum_probs=39.9
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhh-cceEEEEEcCC
Q 002143 646 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMG 724 (960)
Q Consensus 646 KLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLS-k~YEIvIyTAg 724 (960)
.+.+++||||||+++.. .+ -+...+.|+++. +-..++|.|.-
T Consensus 6 ~kli~fDlDGTLl~~~~--~i-----------------------------------~~~~~~al~~l~~~G~~~~iaTGR 48 (290)
T 3dnp_A 6 KQLLALNIDGALLRSNG--KI-----------------------------------HQATKDAIEYVKKKGIYVTLVTNR 48 (290)
T ss_dssp CCEEEECCCCCCSCTTS--CC-----------------------------------CHHHHHHHHHHHHTTCEEEEBCSS
T ss_pred ceEEEEcCCCCCCCCCC--cc-----------------------------------CHHHHHHHHHHHHCCCEEEEECCC
Confidence 45799999999998742 11 223445666654 34788888877
Q ss_pred cHHHHHHHHHHhcCC
Q 002143 725 NKLYATEMAKVLDPK 739 (960)
Q Consensus 725 treYAd~VLdiLDP~ 739 (960)
...-+..+++.++..
T Consensus 49 ~~~~~~~~~~~~~~~ 63 (290)
T 3dnp_A 49 HFRSAQKIAKSLKLD 63 (290)
T ss_dssp CHHHHHHHHHHTTCC
T ss_pred ChHHHHHHHHHcCCC
Confidence 777777888887765
No 138
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=84.87 E-value=0.78 Score=44.58 Aligned_cols=82 Identities=15% Similarity=0.113 Sum_probs=51.1
Q ss_pred EEeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC
Q 002143 698 WTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 776 (960)
Q Consensus 698 yVkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd 776 (960)
.+.+.|++.++|+++.+. |.++|.|++.. ++..+++.++-.. +|.. +++.+++. ..+.+ ...+.+=++ .+|.+
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~-~f~~-~~~~~~~~-~~Kp~-~~~~~~~~~-~~~~~ 166 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKK-YFDA-LALSYEIK-AVKPN-PKIFGFALA-KVGYP 166 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGG-GCSE-EC-------------CCHHHHHHH-HHCSS
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHh-HeeE-EEeccccC-CCCCC-HHHHHHHHH-HcCCC
Confidence 578999999999999975 99999999976 6888888887554 5764 55444332 11110 112222222 24544
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
. |+|+|++.
T Consensus 167 ~--~~vgD~~~ 175 (220)
T 2zg6_A 167 A--VHVGDIYE 175 (220)
T ss_dssp E--EEEESSCC
T ss_pred e--EEEcCCch
Confidence 4 89999976
No 139
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=84.71 E-value=0.99 Score=45.49 Aligned_cols=57 Identities=21% Similarity=0.177 Sum_probs=33.2
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhh-cceEEEEEcCC
Q 002143 646 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTMG 724 (960)
Q Consensus 646 KLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLS-k~YEIvIyTAg 724 (960)
.+.+++||||||+.+.. . +-+...+.|+++. +-..++|.|.-
T Consensus 5 ~kli~~DlDGTLl~~~~--~-----------------------------------i~~~~~~al~~l~~~G~~~~iaTGR 47 (279)
T 3mpo_A 5 IKLIAIDIDGTLLNEKN--E-----------------------------------LAQATIDAVQAAKAQGIKVVLCTGR 47 (279)
T ss_dssp CCEEEECC------------------------------------------------CHHHHHHHHHHHHTTCEEEEECSS
T ss_pred eEEEEEcCcCCCCCCCC--c-----------------------------------CCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45799999999998742 0 1233446666665 45788888888
Q ss_pred cHHHHHHHHHHhcCC
Q 002143 725 NKLYATEMAKVLDPK 739 (960)
Q Consensus 725 treYAd~VLdiLDP~ 739 (960)
...-+..+++.|+..
T Consensus 48 ~~~~~~~~~~~l~~~ 62 (279)
T 3mpo_A 48 PLTGVQPYLDAMDID 62 (279)
T ss_dssp CHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHcCCC
Confidence 888888888887754
No 140
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=84.65 E-value=0.35 Score=46.04 Aligned_cols=82 Identities=12% Similarity=0.088 Sum_probs=55.9
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCCCc
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESA 778 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrds~ 778 (960)
+.+.||+.+ |+.+.+.|.++|.|++.+.++..+++.++-.. +|.. +++.+++.. .+.. ...+.+=++ .+| .+.
T Consensus 73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~Kp~-~~~~~~~~~-~~~-~~~ 145 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLR-YFKG-IFSAESVKE-YKPS-PKVYKYFLD-SIG-AKE 145 (201)
T ss_dssp CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEEGGGGTC-CTTC-HHHHHHHHH-HHT-CSC
T ss_pred cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHH-hCcE-EEehhhcCC-CCCC-HHHHHHHHH-hcC-CCc
Confidence 467899999 99997559999999999999999999887654 5654 555443321 1110 001222222 457 778
Q ss_pred EEEEcCCCC
Q 002143 779 VVIIDDSVR 787 (960)
Q Consensus 779 VVIVDDsp~ 787 (960)
+|+|+|+..
T Consensus 146 ~~~vGD~~~ 154 (201)
T 2w43_A 146 AFLVSSNAF 154 (201)
T ss_dssp CEEEESCHH
T ss_pred EEEEeCCHH
Confidence 999999974
No 141
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=84.48 E-value=0.37 Score=46.57 Aligned_cols=82 Identities=16% Similarity=0.130 Sum_probs=55.7
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
+...|++.++|+.+.+.|.++|.|++...++..+++.+.-. |.. +++.+.+.. .+.. . ..++-+-..+|.+ +
T Consensus 115 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~---f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~~ 187 (254)
T 3umg_A 115 LTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP---WDV-IIGSDINRK-YKPD-P-QAYLRTAQVLGLHPG 187 (254)
T ss_dssp CCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC---CSC-CCCHHHHTC-CTTS-H-HHHHHHHHHTTCCGG
T ss_pred CcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC---eeE-EEEcCcCCC-CCCC-H-HHHHHHHHHcCCChH
Confidence 45689999999999877999999999999999999988643 543 443332211 1110 0 1122232346777 8
Q ss_pred cEEEEcCCCC
Q 002143 778 AVVIIDDSVR 787 (960)
Q Consensus 778 ~VVIVDDsp~ 787 (960)
.+|+|+|+..
T Consensus 188 ~~~~iGD~~~ 197 (254)
T 3umg_A 188 EVMLAAAHNG 197 (254)
T ss_dssp GEEEEESCHH
T ss_pred HEEEEeCChH
Confidence 9999999963
No 142
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=84.45 E-value=1.3 Score=45.45 Aligned_cols=57 Identities=26% Similarity=0.207 Sum_probs=39.0
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcCCc
Q 002143 647 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMGN 725 (960)
Q Consensus 647 LTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTAgt 725 (960)
+.+++||||||+.+.. .+ .|...+.|+++.+ -..+++.|.-.
T Consensus 5 kli~~DlDGTLl~~~~--~i-----------------------------------~~~~~~al~~l~~~G~~~~iaTGR~ 47 (288)
T 1nrw_A 5 KLIAIDLDGTLLNSKH--QV-----------------------------------SLENENALRQAQRDGIEVVVSTGRA 47 (288)
T ss_dssp CEEEEECCCCCSCTTS--CC-----------------------------------CHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEEeCCCCCCCCCC--cc-----------------------------------CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4689999999998742 11 2334456666654 47788888888
Q ss_pred HHHHHHHHHHhcCCC
Q 002143 726 KLYATEMAKVLDPKG 740 (960)
Q Consensus 726 reYAd~VLdiLDP~g 740 (960)
...+..+++.+....
T Consensus 48 ~~~~~~~~~~l~~~~ 62 (288)
T 1nrw_A 48 HFDVMSIFEPLGIKT 62 (288)
T ss_dssp HHHHHHHHGGGTCCC
T ss_pred HHHHHHHHHHcCCCC
Confidence 777777777665443
No 143
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=83.75 E-value=1.1 Score=44.82 Aligned_cols=56 Identities=18% Similarity=0.160 Sum_probs=34.3
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcCCc
Q 002143 647 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMGN 725 (960)
Q Consensus 647 LTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTAgt 725 (960)
+.+++||||||+++.. .+ .+...+.|+++.+ -+.+++.|--.
T Consensus 4 kli~~DlDGTLl~~~~--~i-----------------------------------~~~~~~al~~l~~~G~~~~~aTGR~ 46 (258)
T 2pq0_A 4 KIVFFDIDGTLLDEQK--QL-----------------------------------PLSTIEAVRRLKQSGVYVAIATGRA 46 (258)
T ss_dssp CEEEECTBTTTBCTTS--CC-----------------------------------CHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEEeCCCCCcCCCC--cc-----------------------------------CHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4689999999998742 12 2223345555543 36666776665
Q ss_pred HHHHHHHHHHhcCC
Q 002143 726 KLYATEMAKVLDPK 739 (960)
Q Consensus 726 reYAd~VLdiLDP~ 739 (960)
...+..+++.|+..
T Consensus 47 ~~~~~~~~~~l~~~ 60 (258)
T 2pq0_A 47 PFMFEHVRKQLGID 60 (258)
T ss_dssp GGGSHHHHHHHTCC
T ss_pred hHHHHHHHHhcCCC
Confidence 55566666666543
No 144
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=83.61 E-value=0.61 Score=45.38 Aligned_cols=82 Identities=10% Similarity=0.074 Sum_probs=56.1
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
+...|++.++|+.+.+.|.++|.|++...++..+++.++-. |.. +++.+.+.. .+.. . ..++-+-..+|.+ +
T Consensus 119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~---f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~~ 191 (254)
T 3umc_A 119 LRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP---WDM-LLCADLFGH-YKPD-P-QVYLGACRLLDLPPQ 191 (254)
T ss_dssp CEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC---CSE-ECCHHHHTC-CTTS-H-HHHHHHHHHHTCCGG
T ss_pred CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC---cce-EEeeccccc-CCCC-H-HHHHHHHHHcCCChH
Confidence 46789999999999988999999999999999999988653 553 444332211 1100 0 0122222246776 8
Q ss_pred cEEEEcCCCC
Q 002143 778 AVVIIDDSVR 787 (960)
Q Consensus 778 ~VVIVDDsp~ 787 (960)
.+|+|+|+..
T Consensus 192 ~~~~iGD~~~ 201 (254)
T 3umc_A 192 EVMLCAAHNY 201 (254)
T ss_dssp GEEEEESCHH
T ss_pred HEEEEcCchH
Confidence 9999999963
No 145
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=83.53 E-value=0.63 Score=44.37 Aligned_cols=81 Identities=16% Similarity=0.151 Sum_probs=55.6
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCcccc---CCcccCC
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKD---LEGVLGM 775 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKD---LsrVLGr 775 (960)
+...|++.++|+.+.+.|.++|.|++...++..+++.|. .+|.. +++.++... .+.+ ...+.+= +. .+|.
T Consensus 98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~---~~fd~-i~~~~~~~~-~KP~-~~~~~~~l~~~~-~lgi 170 (240)
T 3smv_A 98 WPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLG---VEFDH-IITAQDVGS-YKPN-PNNFTYMIDALA-KAGI 170 (240)
T ss_dssp CCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTC---SCCSE-EEEHHHHTS-CTTS-HHHHHHHHHHHH-HTTC
T ss_pred CCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcC---CccCE-EEEccccCC-CCCC-HHHHHHHHHHHH-hcCC
Confidence 467899999999999889999999999999999888765 36764 555443221 1110 0011112 33 4677
Q ss_pred C-CcEEEEcCCC
Q 002143 776 E-SAVVIIDDSV 786 (960)
Q Consensus 776 d-s~VVIVDDsp 786 (960)
+ +.+|+|+|+.
T Consensus 171 ~~~~~~~vGD~~ 182 (240)
T 3smv_A 171 EKKDILHTAESL 182 (240)
T ss_dssp CGGGEEEEESCT
T ss_pred CchhEEEECCCc
Confidence 7 8899999985
No 146
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=83.44 E-value=0.31 Score=46.35 Aligned_cols=86 Identities=12% Similarity=0.174 Sum_probs=56.6
Q ss_pred EEeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHH------hcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCc
Q 002143 698 WTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKV------LDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEG 771 (960)
Q Consensus 698 yVkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdi------LDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsr 771 (960)
++...|++.++|+.+.+.|.++|.|++...++..+++. ++-. .+|.. +++.+++.. .+.. . ...+-+-.
T Consensus 87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~-~~f~~-~~~~~~~~~-~Kp~-~-~~~~~~~~ 161 (211)
T 2i6x_A 87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLD-SFFDK-VYASCQMGK-YKPN-E-DIFLEMIA 161 (211)
T ss_dssp EEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGG-GGSSE-EEEHHHHTC-CTTS-H-HHHHHHHH
T ss_pred hcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHH-HHcCe-EEeecccCC-CCCC-H-HHHHHHHH
Confidence 56789999999999988899999999999998888876 3322 25654 444332211 1110 0 01122222
Q ss_pred ccCCC-CcEEEEcCCCCc
Q 002143 772 VLGME-SAVVIIDDSVRV 788 (960)
Q Consensus 772 VLGrd-s~VVIVDDsp~v 788 (960)
.+|.+ +.+|+|+|+..-
T Consensus 162 ~~~~~~~~~~~igD~~~D 179 (211)
T 2i6x_A 162 DSGMKPEETLFIDDGPAN 179 (211)
T ss_dssp HHCCCGGGEEEECSCHHH
T ss_pred HhCCChHHeEEeCCCHHH
Confidence 45766 899999999753
No 147
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=83.34 E-value=1.7 Score=43.44 Aligned_cols=17 Identities=24% Similarity=0.352 Sum_probs=14.1
Q ss_pred CCeEEEEeCCCceeecc
Q 002143 645 RKLCLVLDLDHTLLNSA 661 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs 661 (960)
+..++++||||||+.+.
T Consensus 16 ~~~~v~~DlDGTLl~~~ 32 (271)
T 1vjr_A 16 KIELFILDMDGTFYLDD 32 (271)
T ss_dssp GCCEEEECCBTTTEETT
T ss_pred CCCEEEEcCcCcEEeCC
Confidence 45579999999999873
No 148
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=83.03 E-value=0.79 Score=44.79 Aligned_cols=84 Identities=18% Similarity=0.228 Sum_probs=56.5
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceee-eeeeecCCCCCCCCCCCCCCccccCCcccCCC
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA-GRVISRGDDGDPFDGDERVPKSKDLEGVLGME 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~-~RIySRddc~~~~dGder~~yiKDLsrVLGrd 776 (960)
+.+.|++.++|+++.+. |.++|+|++...++..+++. +-.. +|. +.+++.++... .+.. ...+.+=+ ..+|.+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~-~f~~d~i~~~~~~~~-~kp~-~~~~~~~~-~~lg~~ 182 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPG-MFHKELMVTAFDVKY-GKPN-PEPYLMAL-KKGGLK 182 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTT-TCCGGGEECTTTCSS-CTTS-SHHHHHHH-HHTTCC
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHH-hcCcceEEeHHhCCC-CCCC-hHHHHHHH-HHcCCC
Confidence 56889999999999876 99999999999999888876 5443 572 23555443221 1110 01122223 246777
Q ss_pred -CcEEEEcCCCC
Q 002143 777 -SAVVIIDDSVR 787 (960)
Q Consensus 777 -s~VVIVDDsp~ 787 (960)
+.+|+|+|+..
T Consensus 183 ~~~~i~vGD~~~ 194 (243)
T 3qxg_A 183 ADEAVVIENAPL 194 (243)
T ss_dssp GGGEEEEECSHH
T ss_pred HHHeEEEeCCHH
Confidence 89999999973
No 149
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=82.80 E-value=0.71 Score=46.59 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
.+.+++||||||+++.
T Consensus 5 ~kli~~DlDGTLl~~~ 20 (264)
T 3epr_A 5 YKGYLIDLDGTIYKGK 20 (264)
T ss_dssp CCEEEECCBTTTEETT
T ss_pred CCEEEEeCCCceEeCC
Confidence 4579999999999874
No 150
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=82.74 E-value=1.4 Score=41.43 Aligned_cols=84 Identities=18% Similarity=0.098 Sum_probs=55.9
Q ss_pred EeeccCHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk-~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+...|++.++|+.+.+ .+.++|+|++...++..+++.++-.. +|.. +++.++... .+.. . ..++.+-..+|.+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~-~k~~-~-~~~~~~~~~~~~~~ 162 (225)
T 3d6j_A 88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDD-WFDI-IIGGEDVTH-HKPD-P-EGLLLAIDRLKACP 162 (225)
T ss_dssp CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTT-CCSE-EECGGGCSS-CTTS-T-HHHHHHHHHTTCCG
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchh-heee-eeehhhcCC-CCCC-h-HHHHHHHHHhCCCh
Confidence 4578999999999986 49999999999999999998876543 4654 444332211 1110 0 1122222246776
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|.|+|+..
T Consensus 163 ~~~i~iGD~~n 173 (225)
T 3d6j_A 163 EEVLYIGDSTV 173 (225)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEEcCCHH
Confidence 88999999963
No 151
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=82.57 E-value=1.8 Score=44.02 Aligned_cols=57 Identities=21% Similarity=0.147 Sum_probs=39.7
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhcceEEEEEcCCcH
Q 002143 647 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNK 726 (960)
Q Consensus 647 LTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk~YEIvIyTAgtr 726 (960)
+.+++||||||+++.. .+ -|...+.|++..+-..++|.|.-..
T Consensus 3 kli~~DlDGTLl~~~~--~i-----------------------------------~~~~~~al~~~~~Gi~v~iaTGR~~ 45 (268)
T 1nf2_A 3 RVFVFDLDGTLLNDNL--EI-----------------------------------SEKDRRNIEKLSRKCYVVFASGRML 45 (268)
T ss_dssp CEEEEECCCCCSCTTS--CC-----------------------------------CHHHHHHHHHHTTTSEEEEECSSCH
T ss_pred cEEEEeCCCcCCCCCC--cc-----------------------------------CHHHHHHHHHHhCCCEEEEECCCCh
Confidence 4689999999998642 11 1223456666224578888888888
Q ss_pred HHHHHHHHHhcCCC
Q 002143 727 LYATEMAKVLDPKG 740 (960)
Q Consensus 727 eYAd~VLdiLDP~g 740 (960)
..+..+++.|+..+
T Consensus 46 ~~~~~~~~~l~~~~ 59 (268)
T 1nf2_A 46 VSTLNVEKKYFKRT 59 (268)
T ss_dssp HHHHHHHHHHSSSC
T ss_pred HHHHHHHHHhCCCC
Confidence 88888888877654
No 152
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=82.31 E-value=1.2 Score=45.09 Aligned_cols=15 Identities=20% Similarity=0.565 Sum_probs=12.6
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||++..
T Consensus 2 k~i~~D~DGtL~~~~ 16 (263)
T 1zjj_A 2 VAIIFDMDGVLYRGN 16 (263)
T ss_dssp EEEEEECBTTTEETT
T ss_pred eEEEEeCcCceEeCC
Confidence 368999999999753
No 153
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=82.28 E-value=1.3 Score=45.41 Aligned_cols=60 Identities=12% Similarity=0.112 Sum_probs=38.0
Q ss_pred cCCCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhh-cceEEEEE
Q 002143 643 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLY 721 (960)
Q Consensus 643 s~kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLS-k~YEIvIy 721 (960)
..+.+.+++||||||+.+... .+ -+...+.|+++. +-..++|.
T Consensus 18 ~~~~kli~~DlDGTLl~~~~~-~i-----------------------------------~~~~~~al~~l~~~G~~v~ia 61 (283)
T 3dao_A 18 QGMIKLIATDIDGTLVKDGSL-LI-----------------------------------DPEYMSVIDRLIDKGIIFVVC 61 (283)
T ss_dssp -CCCCEEEECCBTTTBSTTCS-CC-----------------------------------CHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCceEEEEeCcCCCCCCCCC-cC-----------------------------------CHHHHHHHHHHHHCCCEEEEE
Confidence 455678999999999987420 11 223345555554 34777777
Q ss_pred cCCcHHHHHHHHHHhcC
Q 002143 722 TMGNKLYATEMAKVLDP 738 (960)
Q Consensus 722 TAgtreYAd~VLdiLDP 738 (960)
|.-...-+..+++.|..
T Consensus 62 TGR~~~~~~~~~~~l~~ 78 (283)
T 3dao_A 62 SGRQFSSEFKLFAPIKH 78 (283)
T ss_dssp CSSCHHHHHHHTGGGGG
T ss_pred cCCCHHHHHHHHHHcCC
Confidence 77666666667666654
No 154
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=82.08 E-value=0.95 Score=44.54 Aligned_cols=78 Identities=13% Similarity=0.188 Sum_probs=55.5
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
+...|++.++|+.+...|.++|+|++...++..+++.++-.. +|.. ++..... ++ ..++-+-..+|.+ +
T Consensus 111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-i~~~~kp----~~----~~~~~~~~~l~~~~~ 180 (251)
T 2pke_A 111 VEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSD-LFPR-IEVVSEK----DP----QTYARVLSEFDLPAE 180 (251)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGG-TCCC-EEEESCC----SH----HHHHHHHHHHTCCGG
T ss_pred CCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHH-hCce-eeeeCCC----CH----HHHHHHHHHhCcCch
Confidence 567899999999998779999999999999999998876543 4654 4432210 11 1122222246766 8
Q ss_pred cEEEEcCCC
Q 002143 778 AVVIIDDSV 786 (960)
Q Consensus 778 ~VVIVDDsp 786 (960)
.+|.|.|+.
T Consensus 181 ~~i~iGD~~ 189 (251)
T 2pke_A 181 RFVMIGNSL 189 (251)
T ss_dssp GEEEEESCC
T ss_pred hEEEECCCc
Confidence 999999997
No 155
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=81.99 E-value=1 Score=45.43 Aligned_cols=33 Identities=18% Similarity=0.074 Sum_probs=24.5
Q ss_pred HHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcC
Q 002143 706 WTFLERASKLFEMHLYTMGNKLYATEMAKVLDP 738 (960)
Q Consensus 706 ~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP 738 (960)
.+.|+++.+...++|.|.-....+..+++.|+.
T Consensus 25 ~~~l~~~~~gi~v~iaTGR~~~~~~~~~~~l~l 57 (244)
T 1s2o_A 25 QEYLGDRRGNFYLAYATGRSYHSARELQKQVGL 57 (244)
T ss_dssp HHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTC
T ss_pred HHHHHHhcCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 456666666788888888888888888877553
No 156
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=81.83 E-value=1.1 Score=43.12 Aligned_cols=79 Identities=16% Similarity=0.156 Sum_probs=51.1
Q ss_pred eccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-Cc
Q 002143 701 LRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SA 778 (960)
Q Consensus 701 LRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~ 778 (960)
+.|++.++|+++.+. |.++|+|++.. +..+++.+.-.. +|.. +++.+++.. .+.. ...+.+=+. .+|.+ +.
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~-~f~~-i~~~~~~~~-~Kp~-~~~~~~~~~-~lgi~~~~ 165 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIID-DFHA-IVDPTTLAK-GKPD-PDIFLTAAA-MLDVSPAD 165 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTT-TCSE-ECCC-----------CCHHHHHHH-HHTSCGGG
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHh-hcCE-EeeHhhCCC-CCCC-hHHHHHHHH-HcCCCHHH
Confidence 689999999999976 99999999855 788888877554 5664 444433211 1110 012222232 46776 89
Q ss_pred EEEEcCCC
Q 002143 779 VVIIDDSV 786 (960)
Q Consensus 779 VVIVDDsp 786 (960)
+|+|+|+.
T Consensus 166 ~i~vGDs~ 173 (233)
T 3nas_A 166 CAAIEDAE 173 (233)
T ss_dssp EEEEECSH
T ss_pred EEEEeCCH
Confidence 99999996
No 157
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=81.75 E-value=0.91 Score=43.24 Aligned_cols=81 Identities=6% Similarity=0.021 Sum_probs=54.8
Q ss_pred eccCHHHHHHHhhcc-eEEEEEcCCc---HHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC
Q 002143 701 LRPGIWTFLERASKL-FEMHLYTMGN---KLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 776 (960)
Q Consensus 701 LRPgL~EFLeeLSk~-YEIvIyTAgt---reYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd 776 (960)
..|++.++|+.+.+. +.++|+|++. ..++..+++.++-.. +|.. ++..++... .+.. . ...+-+-..+|.+
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~ 174 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLME-FIDK-TFFADEVLS-YKPR-K-EMFEKVLNSFEVK 174 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGG-GCSE-EEEHHHHTC-CTTC-H-HHHHHHHHHTTCC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHH-Hhhh-heeccccCC-CCCC-H-HHHHHHHHHcCCC
Confidence 489999999999876 9999999999 999999998876544 5654 444332211 1110 0 0112222246776
Q ss_pred -CcEEEEcCCC
Q 002143 777 -SAVVIIDDSV 786 (960)
Q Consensus 777 -s~VVIVDDsp 786 (960)
+.++.|+|+.
T Consensus 175 ~~~~~~iGD~~ 185 (235)
T 2om6_A 175 PEESLHIGDTY 185 (235)
T ss_dssp GGGEEEEESCT
T ss_pred ccceEEECCCh
Confidence 8999999997
No 158
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=81.72 E-value=2.3 Score=42.90 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=27.0
Q ss_pred HHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhcCC
Q 002143 705 IWTFLERAS-KLFEMHLYTMGNKLYATEMAKVLDPK 739 (960)
Q Consensus 705 L~EFLeeLS-k~YEIvIyTAgtreYAd~VLdiLDP~ 739 (960)
..+.|+++. +-..++|.|.-....+..+++.|+..
T Consensus 22 ~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 446777775 45889999988888888888888754
No 159
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=81.67 E-value=1.5 Score=43.03 Aligned_cols=16 Identities=25% Similarity=0.270 Sum_probs=12.4
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
-+.+++||||||+.+.
T Consensus 7 ik~i~fDlDGTLld~~ 22 (259)
T 2ho4_A 7 LKAVLVDLNGTLHIED 22 (259)
T ss_dssp CCEEEEESSSSSCC--
T ss_pred CCEEEEeCcCcEEeCC
Confidence 4579999999999864
No 160
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=81.38 E-value=1.2 Score=44.14 Aligned_cols=38 Identities=13% Similarity=0.281 Sum_probs=34.2
Q ss_pred EeeccCHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHh
Q 002143 699 TKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVL 736 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk-~YEIvIyTAgtreYAd~VLdiL 736 (960)
+.++||+.+||+++.+ .|.++|.|++...++..+++-|
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~l 114 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI 114 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTT
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhcC
Confidence 6789999999999986 4999999999999999998844
No 161
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=81.30 E-value=1.7 Score=44.23 Aligned_cols=17 Identities=24% Similarity=0.399 Sum_probs=13.9
Q ss_pred CCeEEEEeCCCceeecc
Q 002143 645 RKLCLVLDLDHTLLNSA 661 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs 661 (960)
+.+.+++||||||+++.
T Consensus 12 ~~kli~~DlDGTLl~~~ 28 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPAR 28 (262)
T ss_dssp -CEEEEEESBTTTBSTT
T ss_pred CeEEEEEeCccCCCCCC
Confidence 45789999999999864
No 162
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=80.97 E-value=0.67 Score=46.53 Aligned_cols=15 Identities=33% Similarity=0.443 Sum_probs=13.0
Q ss_pred CeEEEEeCCCceeec
Q 002143 646 KLCLVLDLDHTLLNS 660 (960)
Q Consensus 646 KLTLVLDLDETLVHS 660 (960)
-+.+++||||||+++
T Consensus 6 ~kli~~DlDGTLl~~ 20 (266)
T 3pdw_A 6 YKGYLIDLDGTMYNG 20 (266)
T ss_dssp CSEEEEECSSSTTCH
T ss_pred CCEEEEeCcCceEeC
Confidence 457999999999976
No 163
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=80.83 E-value=1.5 Score=44.96 Aligned_cols=56 Identities=20% Similarity=0.155 Sum_probs=38.0
Q ss_pred eEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcCCc
Q 002143 647 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTMGN 725 (960)
Q Consensus 647 LTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTAgt 725 (960)
+.+++||||||+.+.. .+ -|...+.|+++.+ -..++|.|.-.
T Consensus 6 kli~~DlDGTLl~~~~--~i-----------------------------------~~~~~~aL~~l~~~Gi~vviaTGR~ 48 (282)
T 1rkq_A 6 KLIAIDMDGTLLLPDH--TI-----------------------------------SPAVKNAIAAARARGVNVVLTTGRP 48 (282)
T ss_dssp CEEEECCCCCCSCTTS--CC-----------------------------------CHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEEeCCCCCCCCCC--cC-----------------------------------CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 5799999999998642 11 2233466676654 47788888777
Q ss_pred HHHHHHHHHHhcCC
Q 002143 726 KLYATEMAKVLDPK 739 (960)
Q Consensus 726 reYAd~VLdiLDP~ 739 (960)
...+..+++.|+..
T Consensus 49 ~~~~~~~~~~l~l~ 62 (282)
T 1rkq_A 49 YAGVHNYLKELHME 62 (282)
T ss_dssp GGGTHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCC
Confidence 77777777776644
No 164
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=80.68 E-value=2.4 Score=43.07 Aligned_cols=40 Identities=20% Similarity=0.181 Sum_probs=29.2
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhh-cceEEEEEcC
Q 002143 646 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS-KLFEMHLYTM 723 (960)
Q Consensus 646 KLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLS-k~YEIvIyTA 723 (960)
...+++||||||++... .-|+..++|+++. +.+.+++.|+
T Consensus 14 ~k~i~~D~DGtL~~~~~--------------------------------------~~~~~~~~l~~l~~~g~~~~~~Tn 54 (284)
T 2hx1_A 14 YKCIFFDAFGVLKTYNG--------------------------------------LLPGIENTFDYLKAQGQDYYIVTN 54 (284)
T ss_dssp CSEEEECSBTTTEETTE--------------------------------------ECTTHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEcCcCCcCcCCe--------------------------------------eChhHHHHHHHHHHCCCEEEEEeC
Confidence 45799999999998531 1266777888776 4578888886
No 165
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=80.40 E-value=0.65 Score=43.86 Aligned_cols=85 Identities=9% Similarity=0.149 Sum_probs=56.0
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
....|++.++|+.+.+...++|.|++...++..+++.++-.. +|.. +++.+++.. .+.+ ...+.+=++ .+|.+ +
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~-~f~~-~~~~~~~~~-~Kp~-~~~~~~~~~-~~~~~~~ 159 (200)
T 3cnh_A 85 SQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGE-FLLA-FFTSSALGV-MKPN-PAMYRLGLT-LAQVRPE 159 (200)
T ss_dssp CCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGG-TCSC-EEEHHHHSC-CTTC-HHHHHHHHH-HHTCCGG
T ss_pred CccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHH-hcce-EEeecccCC-CCCC-HHHHHHHHH-HcCCCHH
Confidence 347899999999998766999999999999999999876443 4654 444332211 1110 001222222 45766 8
Q ss_pred cEEEEcCCCCc
Q 002143 778 AVVIIDDSVRV 788 (960)
Q Consensus 778 ~VVIVDDsp~v 788 (960)
.+|+|+|+..-
T Consensus 160 ~~~~vgD~~~D 170 (200)
T 3cnh_A 160 EAVMVDDRLQN 170 (200)
T ss_dssp GEEEEESCHHH
T ss_pred HeEEeCCCHHH
Confidence 89999999743
No 166
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=80.27 E-value=2.2 Score=42.66 Aligned_cols=18 Identities=22% Similarity=0.239 Sum_probs=14.9
Q ss_pred CCCeEEEEeCCCceeecc
Q 002143 644 ARKLCLVLDLDHTLLNSA 661 (960)
Q Consensus 644 ~kKLTLVLDLDETLVHSs 661 (960)
.+++.+++||||||+.+.
T Consensus 4 ~~~kli~~DlDGTLl~~~ 21 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAPR 21 (246)
T ss_dssp CCSEEEEEESBTTTBCTT
T ss_pred CCceEEEEECCCCcCCCC
Confidence 356789999999999864
No 167
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=79.73 E-value=2.3 Score=39.50 Aligned_cols=80 Identities=16% Similarity=0.095 Sum_probs=52.3
Q ss_pred eccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCCCcE
Q 002143 701 LRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAV 779 (960)
Q Consensus 701 LRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrds~V 779 (960)
..|++.++|+.+.+. +.++|+|++. .++..+++.+.-.. +|.. +++.+++.. .... . ..++-+-..+|.+ .+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~-~f~~-~~~~~~~~~-~kp~-~-~~~~~~~~~~~~~-~~ 155 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAA-YFTE-VVTSSSGFK-RKPN-P-ESMLYLREKYQIS-SG 155 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGG-GEEE-EECGGGCCC-CTTS-C-HHHHHHHHHTTCS-SE
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHh-heee-eeeccccCC-CCCC-H-HHHHHHHHHcCCC-eE
Confidence 789999999999875 9999999876 58888888776543 5654 454433221 1110 0 1122222245666 89
Q ss_pred EEEcCCCC
Q 002143 780 VIIDDSVR 787 (960)
Q Consensus 780 VIVDDsp~ 787 (960)
+.|+|+..
T Consensus 156 ~~iGD~~~ 163 (190)
T 2fi1_A 156 LVIGDRPI 163 (190)
T ss_dssp EEEESSHH
T ss_pred EEEcCCHH
Confidence 99999963
No 168
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=79.23 E-value=0.7 Score=51.34 Aligned_cols=52 Identities=12% Similarity=0.006 Sum_probs=43.0
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceee-eeeeecC
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFA-GRVISRG 751 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~-~RIySRd 751 (960)
+.+.||+.++|+.|.+. |.++|.|++.+.++..+++.++-.. +|. ..+++.+
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~-~Fd~~~Ivs~d 267 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP-YFEADFIATAS 267 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG-GSCGGGEECHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH-hcCCCEEEecc
Confidence 56789999999999876 9999999999999999999886543 676 2466544
No 169
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=78.49 E-value=2.3 Score=41.20 Aligned_cols=48 Identities=15% Similarity=0.009 Sum_probs=40.2
Q ss_pred eeccCHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeee
Q 002143 700 KLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVI 748 (960)
Q Consensus 700 kLRPgL~EFLeeLSk-~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIy 748 (960)
.++||+.++|+++.+ .+.++|.|++...+++.+++.+.-.. +|..++.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~-~~~~~~~ 140 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH-LIATDPE 140 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE-EEECEEE
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-EEEcceE
Confidence 469999999999986 49999999999999999999987653 5555443
No 170
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=76.68 E-value=2.6 Score=40.39 Aligned_cols=16 Identities=19% Similarity=0.351 Sum_probs=13.7
Q ss_pred eEEEEeCCCceeeccc
Q 002143 647 LCLVLDLDHTLLNSAK 662 (960)
Q Consensus 647 LTLVLDLDETLVHSs~ 662 (960)
+.+++||||||+++..
T Consensus 4 k~i~fDlDGTLl~~~~ 19 (250)
T 2c4n_A 4 KNVICDIDGVLMHDNV 19 (250)
T ss_dssp CEEEEECBTTTEETTE
T ss_pred cEEEEcCcceEEeCCE
Confidence 4799999999999853
No 171
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=76.50 E-value=1.4 Score=43.91 Aligned_cols=16 Identities=38% Similarity=0.480 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
.+.+++||||||+.+.
T Consensus 5 ~kli~fDlDGTLl~~~ 20 (274)
T 3fzq_A 5 YKLLILDIDGTLRDEV 20 (274)
T ss_dssp CCEEEECSBTTTBBTT
T ss_pred ceEEEEECCCCCCCCC
Confidence 3579999999999885
No 172
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=76.50 E-value=2.5 Score=43.74 Aligned_cols=40 Identities=23% Similarity=0.253 Sum_probs=28.9
Q ss_pred CeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcC
Q 002143 646 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 723 (960)
Q Consensus 646 KLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTA 723 (960)
.+.+++||||||+.... .-|+..++|+++.+ -+.+++.|+
T Consensus 21 ~k~i~~D~DGTL~~~~~--------------------------------------~~~~~~~~l~~l~~~g~~~~~~Tn 61 (306)
T 2oyc_A 21 AQGVLFDCDGVLWNGER--------------------------------------AVPGAPELLERLARAGKAALFVSN 61 (306)
T ss_dssp CSEEEECSBTTTEETTE--------------------------------------ECTTHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEECCCCcEecCCc--------------------------------------cCcCHHHHHHHHHHCCCeEEEEEC
Confidence 34789999999997531 13567778887764 578888885
No 173
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=76.23 E-value=4.6 Score=41.62 Aligned_cols=73 Identities=16% Similarity=0.261 Sum_probs=51.4
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCCC
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMES 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrds 777 (960)
..++||+.++|+++.+. +.++|.|++...++..+++.++-.. +|.. ++. . .+.+-++ .++...
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~-i~~--------~-----~K~~~~~-~l~~~~ 225 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-VIAE-VLP--------H-----QKSEEVK-KLQAKE 225 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EECS-CCT--------T-----CHHHHHH-HHTTTC
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce-eeee-cCh--------H-----HHHHHHH-HHhcCC
Confidence 34799999999999865 9999999999999999999887543 4432 220 0 1222233 223226
Q ss_pred cEEEEcCCCC
Q 002143 778 AVVIIDDSVR 787 (960)
Q Consensus 778 ~VVIVDDsp~ 787 (960)
.+++|.|+..
T Consensus 226 ~~~~vGDs~~ 235 (287)
T 3a1c_A 226 VVAFVGDGIN 235 (287)
T ss_dssp CEEEEECTTT
T ss_pred eEEEEECCHH
Confidence 7999999863
No 174
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=75.65 E-value=2.8 Score=43.88 Aligned_cols=55 Identities=18% Similarity=0.128 Sum_probs=37.6
Q ss_pred CeEEEEeCCCceeec-ccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcC
Q 002143 646 KLCLVLDLDHTLLNS-AKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 723 (960)
Q Consensus 646 KLTLVLDLDETLVHS-s~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTA 723 (960)
.+.+++||||||+.. .. .+ -|...+.|+++.+ -..++|.|.
T Consensus 27 ikli~~DlDGTLl~~~~~--~i-----------------------------------s~~~~~al~~l~~~Gi~v~iaTG 69 (301)
T 2b30_A 27 IKLLLIDFDGTLFVDKDI--KV-----------------------------------PSENIDAIKEAIEKGYMVSICTG 69 (301)
T ss_dssp CCEEEEETBTTTBCCTTT--CS-----------------------------------CHHHHHHHHHHHHHTCEEEEECS
T ss_pred ccEEEEECCCCCcCCCCC--cc-----------------------------------CHHHHHHHHHHHHCCCEEEEEcC
Confidence 457999999999986 32 11 1234456666654 477888888
Q ss_pred CcHHHHHHHH--HHhc
Q 002143 724 GNKLYATEMA--KVLD 737 (960)
Q Consensus 724 gtreYAd~VL--diLD 737 (960)
-....+..++ +.|+
T Consensus 70 R~~~~~~~~~~~~~l~ 85 (301)
T 2b30_A 70 RSKVGILSAFGEENLK 85 (301)
T ss_dssp SCHHHHHHHHCHHHHH
T ss_pred CCHHHHHHHhhHHhhc
Confidence 7777777777 6554
No 175
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=75.25 E-value=1.4 Score=44.15 Aligned_cols=82 Identities=13% Similarity=0.067 Sum_probs=54.6
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+.+.|++.++|+++.+. |.++|.|++.+ ++..+++.+.-.. +|.. +++.+++.. .+.. ...+.+=+. .+|.+
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~-~f~~-~~~~~~~~~-~Kp~-~~~~~~~~~-~~g~~~ 178 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLRE-HFDF-VLTSEAAGW-PKPD-PRIFQEALR-LAHMEP 178 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGG-GCSC-EEEHHHHSS-CTTS-HHHHHHHHH-HHTCCG
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHH-hhhE-EEeecccCC-CCCC-HHHHHHHHH-HcCCCH
Confidence 57899999999999876 99999999877 4688888876543 5654 454433221 1110 001222233 45766
Q ss_pred CcEEEEcCCC
Q 002143 777 SAVVIIDDSV 786 (960)
Q Consensus 777 s~VVIVDDsp 786 (960)
+.+|+|+|+.
T Consensus 179 ~~~~~vGD~~ 188 (263)
T 3k1z_A 179 VVAAHVGDNY 188 (263)
T ss_dssp GGEEEEESCH
T ss_pred HHEEEECCCc
Confidence 8899999996
No 176
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=74.54 E-value=3.7 Score=41.50 Aligned_cols=83 Identities=20% Similarity=0.151 Sum_probs=56.2
Q ss_pred EeeccCHHHHHHHhhcc--eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCC-
Q 002143 699 TKLRPGIWTFLERASKL--FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM- 775 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~--YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGr- 775 (960)
+...|++.++|+.+.+. +.++|+|++...++..+++.++-. .|.. +++.++... .... ...+ +-+...+|.
T Consensus 113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~f~~-i~~~~~~~~-~kp~-~~~~-~~~~~~lgi~ 186 (275)
T 2qlt_A 113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK--RPEY-FITANDVKQ-GKPH-PEPY-LKGRNGLGFP 186 (275)
T ss_dssp CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC--CCSS-EECGGGCSS-CTTS-SHHH-HHHHHHTTCC
T ss_pred CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC--ccCE-EEEcccCCC-CCCC-hHHH-HHHHHHcCCC
Confidence 56789999999999875 899999999999999999988754 2543 554443211 1110 0012 222224676
Q ss_pred ------C-CcEEEEcCCCC
Q 002143 776 ------E-SAVVIIDDSVR 787 (960)
Q Consensus 776 ------d-s~VVIVDDsp~ 787 (960)
+ +.+|+|.|+..
T Consensus 187 ~~~~~~~~~~~i~~GDs~n 205 (275)
T 2qlt_A 187 INEQDPSKSKVVVFEDAPA 205 (275)
T ss_dssp CCSSCGGGSCEEEEESSHH
T ss_pred ccccCCCcceEEEEeCCHH
Confidence 6 88999999973
No 177
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=73.80 E-value=2.5 Score=42.13 Aligned_cols=16 Identities=25% Similarity=0.277 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+.+.
T Consensus 5 ~k~v~fDlDGTL~~~~ 20 (264)
T 1yv9_A 5 YQGYLIDLDGTIYLGK 20 (264)
T ss_dssp CCEEEECCBTTTEETT
T ss_pred CCEEEEeCCCeEEeCC
Confidence 4579999999999874
No 178
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=73.69 E-value=1.4 Score=41.28 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=37.4
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeee
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAG 745 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~ 745 (960)
..+.|++.++|+.+.+. +.++|+|.+...++..+++.++-.. +|..
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~-~~~~ 121 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY-AFAN 121 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe-EEEe
Confidence 45679999999999865 9999999999999999888876543 4443
No 179
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=72.96 E-value=2.5 Score=41.37 Aligned_cols=99 Identities=16% Similarity=0.106 Sum_probs=57.8
Q ss_pred CCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhhc-ceEEEEEcC
Q 002143 645 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASK-LFEMHLYTM 723 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLSk-~YEIvIyTA 723 (960)
+-+.||+|+|+||+..... +++... ... .+.+|.+. .|++|.+ -+.+.|.|.
T Consensus 8 ~ikliv~D~DGtL~d~~~~--~~~~g~--------------~~~---------~f~~~D~~--~L~~Lk~~Gi~~~I~Tg 60 (168)
T 3ewi_A 8 EIKLLVCNIDGCLTNGHIY--VSGDQK--------------EII---------SYDVKDAI--GISLLKKSGIEVRLISE 60 (168)
T ss_dssp CCCEEEEECCCCCSCSCCB--CCSSCC--------------CEE---------EEEHHHHH--HHHHHHHTTCEEEEECS
T ss_pred cCcEEEEeCccceECCcEE--EcCCCC--------------EEE---------EEecCcHH--HHHHHHHCCCEEEEEeC
Confidence 3458999999999976531 121100 001 12334442 6788875 499999998
Q ss_pred CcHHHHHHHHH--HhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-CcEEEEcCCCC
Q 002143 724 GNKLYATEMAK--VLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVR 787 (960)
Q Consensus 724 gtreYAd~VLd--iLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s~VVIVDDsp~ 787 (960)
. ..+..+++ .|+-. +|.. +. -++ ..++.+...+|.+ ..++.|-|+..
T Consensus 61 ~--~~~~~~l~~l~lgi~--~~~g-------~~--~K~----~~l~~~~~~~gi~~~~~~~vGD~~n 110 (168)
T 3ewi_A 61 R--ACSKQTLSALKLDCK--TEVS-------VS--DKL----ATVDEWRKEMGLCWKEVAYLGNEVS 110 (168)
T ss_dssp S--CCCHHHHHTTCCCCC--EECS-------CS--CHH----HHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred c--HHHHHHHHHhCCCcE--EEEC-------CC--ChH----HHHHHHHHHcCcChHHEEEEeCCHh
Confidence 8 78889998 44432 2211 10 011 1233443345666 78999999864
No 180
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=72.33 E-value=4.1 Score=41.60 Aligned_cols=16 Identities=31% Similarity=0.515 Sum_probs=13.9
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
.+.+++||||||+++.
T Consensus 4 ~kli~~DlDGTLl~~~ 19 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPPR 19 (246)
T ss_dssp SEEEEECSBTTTBSTT
T ss_pred ceEEEEeCcCCcCCCC
Confidence 5689999999999874
No 181
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=72.00 E-value=2.2 Score=43.31 Aligned_cols=15 Identities=47% Similarity=0.640 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||+++.
T Consensus 4 kli~~DlDGTLl~~~ 18 (271)
T 1rlm_A 4 KVIVTDMDGTFLNDA 18 (271)
T ss_dssp CEEEECCCCCCSCTT
T ss_pred cEEEEeCCCCCCCCC
Confidence 478999999999874
No 182
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=70.68 E-value=2.2 Score=44.15 Aligned_cols=16 Identities=38% Similarity=0.474 Sum_probs=14.0
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
.+.+++||||||+.+.
T Consensus 37 iKli~fDlDGTLld~~ 52 (304)
T 3l7y_A 37 VKVIATDMDGTFLNSK 52 (304)
T ss_dssp CSEEEECCCCCCSCTT
T ss_pred eEEEEEeCCCCCCCCC
Confidence 4679999999999875
No 183
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=70.54 E-value=4.7 Score=39.42 Aligned_cols=15 Identities=27% Similarity=0.421 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||+++.
T Consensus 13 k~i~fDlDGTLl~s~ 27 (271)
T 2x4d_A 13 RGVLLDISGVLYDSG 27 (271)
T ss_dssp CEEEECCBTTTEECC
T ss_pred CEEEEeCCCeEEecC
Confidence 478999999999974
No 184
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=69.97 E-value=2.8 Score=41.92 Aligned_cols=15 Identities=47% Similarity=0.534 Sum_probs=13.0
Q ss_pred CeEEEEeCCCceeec
Q 002143 646 KLCLVLDLDHTLLNS 660 (960)
Q Consensus 646 KLTLVLDLDETLVHS 660 (960)
-+.+++||||||+.+
T Consensus 12 iKli~~DlDGTLl~~ 26 (268)
T 3r4c_A 12 IKVLLLDVDGTLLSF 26 (268)
T ss_dssp CCEEEECSBTTTBCT
T ss_pred eEEEEEeCCCCCcCC
Confidence 467999999999984
No 185
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=69.65 E-value=1.5 Score=44.05 Aligned_cols=15 Identities=33% Similarity=0.483 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||+++.
T Consensus 3 kli~~DlDGTLl~~~ 17 (261)
T 2rbk_A 3 KALFFDIDGTLVSFE 17 (261)
T ss_dssp CEEEECSBTTTBCTT
T ss_pred cEEEEeCCCCCcCCC
Confidence 468999999999874
No 186
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=68.53 E-value=1.7 Score=40.33 Aligned_cols=81 Identities=16% Similarity=0.179 Sum_probs=51.6
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCC--CCccccCCcccCC
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDER--VPKSKDLEGVLGM 775 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder--~~yiKDLsrVLGr 775 (960)
+.++|++.++|+.+.+. +.++|.|++...++..+ +.+.-.. +|. .+...+.. +.+... ..+..-|.++ .
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~-~~~-~~~~~~~~---~~~~~~~~~~k~~~l~~l--~ 149 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEF-MAN-RAIFEDGK---FQGIRLRFRDKGEFLKRF--R 149 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEE-EEE-EEEEETTE---EEEEECCSSCHHHHHGGG--T
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchh-hee-eEEeeCCc---eECCcCCccCHHHHHHhc--C
Confidence 47899999999999976 99999999999999888 8776543 333 23322211 000000 0122333322 2
Q ss_pred CCcEEEEcCCCC
Q 002143 776 ESAVVIIDDSVR 787 (960)
Q Consensus 776 ds~VVIVDDsp~ 787 (960)
...++.|.|+..
T Consensus 150 ~~~~i~iGD~~~ 161 (201)
T 4ap9_A 150 DGFILAMGDGYA 161 (201)
T ss_dssp TSCEEEEECTTC
T ss_pred cCcEEEEeCCHH
Confidence 378999999874
No 187
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=68.49 E-value=2.1 Score=45.05 Aligned_cols=47 Identities=9% Similarity=0.132 Sum_probs=41.0
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeee
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGR 746 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~R 746 (960)
+.++|++.++|+++.+. |.++|.|++...+++.+++.++-.. +|...
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~ 224 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDY-AQSNT 224 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEEE
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCe-EEeee
Confidence 56899999999999875 9999999999999999999988754 66654
No 188
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=66.82 E-value=3.8 Score=38.62 Aligned_cols=82 Identities=13% Similarity=0.190 Sum_probs=52.3
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+..+|++.++|+.+.+. +.++|+|++ .++..+++.++-.. +|.. +++.++.. ..++. . ..++-+-..+|.+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~-~f~~-~~~~~~~~-~~Kp~-~-~~~~~~~~~lgi~~ 162 (221)
T 2wf7_A 90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTG-YFDA-IADPAEVA-ASKPA-P-DIFIAAAHAVGVAP 162 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGG-GCSE-ECCTTTSS-SCTTS-S-HHHHHHHHHTTCCG
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHH-Hcce-EeccccCC-CCCCC-h-HHHHHHHHHcCCCh
Confidence 35689999999999865 999999998 66777888776543 5654 44433321 11110 0 0122222245776
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|.|+|+..
T Consensus 163 ~~~i~iGD~~n 173 (221)
T 2wf7_A 163 SESIGLEDSQA 173 (221)
T ss_dssp GGEEEEESSHH
T ss_pred hHeEEEeCCHH
Confidence 88999999963
No 189
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=66.11 E-value=2.5 Score=40.27 Aligned_cols=84 Identities=20% Similarity=0.199 Sum_probs=54.8
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCC-CCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDP-FDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~-~dGder~~yiKDLsrVLGrd- 776 (960)
+...|++.++|+.+.. .++|.|++...++..+++.++-.. +|...+++.+..... +... . ..++.+-..+|.+
T Consensus 86 ~~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~~~~~kpk-~-~~~~~~~~~l~~~~ 160 (229)
T 2fdr_A 86 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLKP-YFAPHIYSAKDLGADRVKPK-P-DIFLHGAAQFGVSP 160 (229)
T ss_dssp CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCGG-GTTTCEEEHHHHCTTCCTTS-S-HHHHHHHHHHTCCG
T ss_pred CccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChHH-hccceEEeccccccCCCCcC-H-HHHHHHHHHcCCCh
Confidence 5678999999999876 899999999999999999886543 562235544321110 0100 0 1122222245766
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|.|+|+..
T Consensus 161 ~~~i~iGD~~~ 171 (229)
T 2fdr_A 161 DRVVVVEDSVH 171 (229)
T ss_dssp GGEEEEESSHH
T ss_pred hHeEEEcCCHH
Confidence 88999999963
No 190
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=65.81 E-value=3.1 Score=41.48 Aligned_cols=81 Identities=16% Similarity=0.151 Sum_probs=54.7
Q ss_pred eeccCHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 700 KLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 700 kLRPgL~EFLeeLSk-~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
.+.||+.++|+.+.+ .+-+.|.|++. .+..+++.++-.. +|.. +++.++.. ..+. +...|.+-++ .+|.+ +
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~-~fd~-i~~~~~~~-~~KP-~p~~~~~a~~-~lg~~p~ 167 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELRE-FFTF-CADASQLK-NSKP-DPEIFLAACA-GLGVPPQ 167 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGG-GCSE-ECCGGGCS-SCTT-STHHHHHHHH-HHTSCGG
T ss_pred cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhcc-cccc-cccccccc-CCCC-cHHHHHHHHH-HcCCChH
Confidence 468999999999974 58888888764 4677888887654 6764 55544332 1121 1123445555 46777 8
Q ss_pred cEEEEcCCCC
Q 002143 778 AVVIIDDSVR 787 (960)
Q Consensus 778 ~VVIVDDsp~ 787 (960)
.+|+|+|++.
T Consensus 168 e~l~VgDs~~ 177 (243)
T 4g9b_A 168 ACIGIEDAQA 177 (243)
T ss_dssp GEEEEESSHH
T ss_pred HEEEEcCCHH
Confidence 9999999963
No 191
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=65.31 E-value=4.2 Score=40.06 Aligned_cols=85 Identities=12% Similarity=-0.000 Sum_probs=54.6
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
+...|++.++|+.+.+. +.++|.|++...++..+++.++-.+ +|...+++.+.+.. .... . ..++-+-..+|.+
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~kp~-~-~~~~~~~~~lgi~~ 177 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG-YKPDFLVTPDDVPA-GRPY-P-WMCYKNAMELGVYP 177 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT-CCCSCCBCGGGSSC-CTTS-S-HHHHHHHHHHTCCS
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcc-cChHheecCCccCC-CCCC-H-HHHHHHHHHhCCCC
Confidence 45689999999999865 9999999999999999998875444 33223444333211 1100 0 1122222245654
Q ss_pred -CcEEEEcCCCC
Q 002143 777 -SAVVIIDDSVR 787 (960)
Q Consensus 777 -s~VVIVDDsp~ 787 (960)
+.++.|.|+..
T Consensus 178 ~~~~i~iGD~~n 189 (267)
T 1swv_A 178 MNHMIKVGDTVS 189 (267)
T ss_dssp GGGEEEEESSHH
T ss_pred CcCEEEEeCCHH
Confidence 68999999963
No 192
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=64.95 E-value=5.2 Score=37.41 Aligned_cols=17 Identities=35% Similarity=0.649 Sum_probs=14.2
Q ss_pred CCeEEEEeCCCceeecc
Q 002143 645 RKLCLVLDLDHTLLNSA 661 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs 661 (960)
+.+.+++||||||+++.
T Consensus 4 ~~k~i~fDlDGTL~d~~ 20 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNE 20 (211)
T ss_dssp CCEEEEEECCCCCBSSC
T ss_pred CCcEEEEeCCCCCCCcc
Confidence 34579999999999984
No 193
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=63.92 E-value=2.8 Score=41.93 Aligned_cols=82 Identities=15% Similarity=0.104 Sum_probs=53.3
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME- 776 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd- 776 (960)
..+.|++.++|+.+.+. +.+.+-| ...++..+++.++-.. +|.. +++.++.. ..+. +...+.+-++ .+|..
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~--~~~~~~~~L~~~gl~~-~Fd~-i~~~~~~~-~~KP-~p~~~~~a~~-~lg~~p 187 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSS--ASKNAINVLNHLGISD-KFDF-IADAGKCK-NNKP-HPEIFLMSAK-GLNVNP 187 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECC--SCTTHHHHHHHHTCGG-GCSE-ECCGGGCC-SCTT-SSHHHHHHHH-HHTCCG
T ss_pred cccchhHHHHHHHHHhccccccccc--ccchhhhHhhhccccc-ccce-eecccccC-CCCC-cHHHHHHHHH-HhCCCh
Confidence 34689999999999854 5566544 4456888898887654 6765 56555432 1121 1113444454 46776
Q ss_pred CcEEEEcCCCC
Q 002143 777 SAVVIIDDSVR 787 (960)
Q Consensus 777 s~VVIVDDsp~ 787 (960)
+.+|+|+|++.
T Consensus 188 ~e~l~VGDs~~ 198 (250)
T 4gib_A 188 QNCIGIEDASA 198 (250)
T ss_dssp GGEEEEESSHH
T ss_pred HHeEEECCCHH
Confidence 89999999974
No 194
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=63.83 E-value=3.7 Score=41.37 Aligned_cols=35 Identities=9% Similarity=0.125 Sum_probs=21.7
Q ss_pred ccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHh
Q 002143 702 RPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVL 736 (960)
Q Consensus 702 RPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiL 736 (960)
-|...+.|+++.+.-.++|.|.-....+..+++.|
T Consensus 25 ~~~~~~al~~l~~~g~v~iaTGR~~~~~~~~~~~l 59 (239)
T 1u02_A 25 DAGLLSLISDLKERFDTYIVTGRSPEEISRFLPLD 59 (239)
T ss_dssp CHHHHHHHHHHHHHSEEEEECSSCHHHHHHHSCSS
T ss_pred CHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHhccc
Confidence 35566778877643377777766666555555433
No 195
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=63.33 E-value=2.3 Score=41.69 Aligned_cols=84 Identities=12% Similarity=0.028 Sum_probs=51.8
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHH-HhcCCCceeeeeeeecC--CCCCCCCCCCCCCccccCCcccC
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAK-VLDPKGVLFAGRVISRG--DDGDPFDGDERVPKSKDLEGVLG 774 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLd-iLDP~g~lF~~RIySRd--dc~~~~dGder~~yiKDLsrVLG 774 (960)
+...|++.++|+++.+. |.++|+|++.+.++...+. .++-. .+|.. +++.+ +.. ..+.. ...+.+=++ .+|
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~-~~f~~-~~~~~~~~~~-~~Kp~-~~~~~~~~~-~lg 185 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFF-SLFSH-IVLGDDPEVQ-HGKPD-PDIFLACAK-RFS 185 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHH-TTSSC-EECTTCTTCC-SCTTS-THHHHHHHH-TSS
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHH-hheee-EEecchhhcc-CCCCC-hHHHHHHHH-HcC
Confidence 56899999999999876 9999999999888776553 22211 24554 44433 221 11110 001222222 456
Q ss_pred CC---CcEEEEcCCCC
Q 002143 775 ME---SAVVIIDDSVR 787 (960)
Q Consensus 775 rd---s~VVIVDDsp~ 787 (960)
.+ +.+|+|+|+..
T Consensus 186 i~~~~~~~i~iGD~~~ 201 (250)
T 3l5k_A 186 PPPAMEKCLVFEDAPN 201 (250)
T ss_dssp SCCCGGGEEEEESSHH
T ss_pred CCCCcceEEEEeCCHH
Confidence 53 78999999973
No 196
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=62.44 E-value=2.8 Score=39.46 Aligned_cols=16 Identities=31% Similarity=0.426 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
.+.+++||||||+++.
T Consensus 6 ~k~v~fDlDGTL~d~~ 21 (225)
T 3d6j_A 6 YTVYLFDFDYTLADSS 21 (225)
T ss_dssp CSEEEECCBTTTEECH
T ss_pred CCEEEEeCCCCCCCCH
Confidence 4579999999999875
No 197
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=60.31 E-value=3 Score=39.78 Aligned_cols=16 Identities=31% Similarity=0.555 Sum_probs=13.9
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+++.
T Consensus 4 ~k~iifDlDGTL~d~~ 19 (234)
T 2hcf_A 4 RTLVLFDIDGTLLKVE 19 (234)
T ss_dssp CEEEEECCBTTTEEEC
T ss_pred ceEEEEcCCCCcccCc
Confidence 4579999999999985
No 198
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=60.28 E-value=3 Score=38.44 Aligned_cols=15 Identities=47% Similarity=0.629 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||+.+.
T Consensus 5 k~i~fDlDGTL~~~~ 19 (207)
T 2go7_A 5 TAFIWDLDGTLLDSY 19 (207)
T ss_dssp CEEEECTBTTTEECH
T ss_pred cEEEEeCCCcccccH
Confidence 478999999999875
No 199
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=60.19 E-value=3.2 Score=44.43 Aligned_cols=82 Identities=18% Similarity=0.079 Sum_probs=53.7
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCC------cHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCc
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMG------NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEG 771 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAg------treYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsr 771 (960)
+.+.|++.++|++|.+. |.++|.|++ .+......+.-|+. +|.. +++.++... .+.+ ...|.+=++
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~---~fd~-i~~~~~~~~-~KP~-p~~~~~~~~- 171 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM---HFDF-LIESCQVGM-VKPE-PQIYKFLLD- 171 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT---TSSE-EEEHHHHTC-CTTC-HHHHHHHHH-
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhh---heeE-EEeccccCC-CCCC-HHHHHHHHH-
Confidence 57889999999999976 999999998 66665555544552 5765 554443221 1211 112334444
Q ss_pred ccCCC-CcEEEEcCCCC
Q 002143 772 VLGME-SAVVIIDDSVR 787 (960)
Q Consensus 772 VLGrd-s~VVIVDDsp~ 787 (960)
.+|.+ +.+|+|||+..
T Consensus 172 ~lg~~p~~~~~v~D~~~ 188 (555)
T 3i28_A 172 TLKASPSEVVFLDDIGA 188 (555)
T ss_dssp HHTCCGGGEEEEESCHH
T ss_pred HcCCChhHEEEECCcHH
Confidence 46776 88999999963
No 200
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=59.56 E-value=3.5 Score=41.99 Aligned_cols=62 Identities=13% Similarity=0.064 Sum_probs=36.8
Q ss_pred CCeEEEEeCCCceeecccCCCCCCchhhhhhhhhccccCCCcceeEeeccceEEEeeccCHHHHHHHhh--cceEEEEEc
Q 002143 645 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS--KLFEMHLYT 722 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs~~~eldP~~~eil~~~ee~D~~~P~~~~F~l~~~~~yVkLRPgL~EFLeeLS--k~YEIvIyT 722 (960)
..+.+++||||||+.+. +.+...+.+. .+.+.|+++. +.+.+++.|
T Consensus 21 ~~kliifDlDGTLlds~----i~~~~~~~l~----------------------------~~~~~l~~~~~~~g~~~~~~t 68 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHT----IDEQKQQDIY----------------------------ELEDYLEQKSKDGELIIGWVT 68 (289)
T ss_dssp CSEEEEEETBTTTBCSS----CCHHHHHHHH----------------------------HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEEECCCCCcCCC----CCcchHHHHH----------------------------HHHHHHHHHHhcCCcEEEEEc
Confidence 46789999999999974 1221111100 0123344443 456777888
Q ss_pred CCcHHHHHHHHHHhcC
Q 002143 723 MGNKLYATEMAKVLDP 738 (960)
Q Consensus 723 AgtreYAd~VLdiLDP 738 (960)
-....-+..++..+..
T Consensus 69 Gr~~~~~~~~~~~~g~ 84 (289)
T 3gyg_A 69 GSSIESILDKMGRGKF 84 (289)
T ss_dssp SSCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHhhcc
Confidence 7666667777777654
No 201
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=59.51 E-value=3.1 Score=38.65 Aligned_cols=16 Identities=19% Similarity=0.509 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+++.
T Consensus 5 ~k~i~fDlDGTL~~~~ 20 (214)
T 3e58_A 5 VEAIIFDMDGVLFDTE 20 (214)
T ss_dssp CCEEEEESBTTTBCCH
T ss_pred ccEEEEcCCCCccccH
Confidence 4589999999999875
No 202
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=59.34 E-value=2.7 Score=39.05 Aligned_cols=49 Identities=6% Similarity=-0.073 Sum_probs=30.3
Q ss_pred CCCChhHHHHHHHhCCEEecccCCCccEEEecCCCCHHHHHHHhCCCcEEcHHHHHHHH
Q 002143 887 NPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASA 945 (960)
Q Consensus 887 npe~~~LwklAe~LGAtVssdVd~kVTHLVAss~gT~Kv~~Alk~GI~IVSpdWLedC~ 945 (960)
.|....+..+++.+|.. .+++-..+..=+..|...|+.+|...|-....
T Consensus 137 kp~~~~~~~~~~~~~~~----------~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~ 185 (190)
T 2fi1_A 137 KPNPESMLYLREKYQIS----------SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLR 185 (190)
T ss_dssp TTSCHHHHHHHHHTTCS----------SEEEEESSHHHHHHHHHTTCEEEECSCHHHHH
T ss_pred CCCHHHHHHHHHHcCCC----------eEEEEcCCHHHHHHHHHcCCeEEEECCCCChh
Confidence 34555677788888743 23443333345666777898888777655543
No 203
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=58.63 E-value=3.4 Score=40.45 Aligned_cols=77 Identities=14% Similarity=0.138 Sum_probs=51.7
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
+.+.||+.++|+++.+...++|.|++.+.++..+++.++-.. +|...+.... . +. .+.+-+.+ |.+ +
T Consensus 95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~-~f~~~~~~~~--~---K~----~~~~~~~~--~~~~~ 162 (231)
T 2p11_A 95 SRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWD-EVEGRVLIYI--H---KE----LMLDQVME--CYPAR 162 (231)
T ss_dssp GGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHH-HTTTCEEEES--S---GG----GCHHHHHH--HSCCS
T ss_pred CCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHH-hcCeeEEecC--C---hH----HHHHHHHh--cCCCc
Confidence 567899999999999776899999999999999998765432 4543221110 0 00 12222221 334 7
Q ss_pred cEEEEcCCCC
Q 002143 778 AVVIIDDSVR 787 (960)
Q Consensus 778 ~VVIVDDsp~ 787 (960)
.+|+|+|+..
T Consensus 163 ~~~~vgDs~~ 172 (231)
T 2p11_A 163 HYVMVDDKLR 172 (231)
T ss_dssp EEEEECSCHH
T ss_pred eEEEEcCccc
Confidence 8999999974
No 204
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=62.71 E-value=2.1 Score=43.96 Aligned_cols=74 Identities=19% Similarity=0.298 Sum_probs=52.9
Q ss_pred EEeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC
Q 002143 698 WTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 776 (960)
Q Consensus 698 yVkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd 776 (960)
...+||++.++|+++.+. |.++|.|...+.++..+++.++-.. +|.. ++- + .+.+-++ .++..
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~~-~~p-~------------~k~~~~~-~l~~~ 197 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-YYSN-LSP-E------------DKVRIIE-KLKQN 197 (263)
Confidence 356899999999999875 9999999999999999999887543 4543 321 1 1222222 23444
Q ss_pred -CcEEEEcCCCC
Q 002143 777 -SAVVIIDDSVR 787 (960)
Q Consensus 777 -s~VVIVDDsp~ 787 (960)
..+++|.|+..
T Consensus 198 ~~~~~~VGD~~~ 209 (263)
T 2yj3_A 198 GNKVLMIGDGVN 209 (263)
Confidence 67999999853
No 205
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=57.71 E-value=3.2 Score=42.79 Aligned_cols=95 Identities=14% Similarity=0.050 Sum_probs=53.6
Q ss_pred EeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcC--------CCceeeeeeeecCCCCCCCCCCCCCCccccC
Q 002143 699 TKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDP--------KGVLFAGRVISRGDDGDPFDGDERVPKSKDL 769 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP--------~g~lF~~RIySRddc~~~~dGder~~yiKDL 769 (960)
..+.||+.++|+.|.+. +.++|.|+....|++.+..+|+- .|.+|.. ++.+++. . .+.+ ...+.+=+
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~-~-~kp~-p~~~~~~~ 262 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVM-QCQREQG-D-TRKD-DVVKEEIF 262 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSE-EEECCTT-C-CSCH-HHHHHHHH
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCchh-eeeccCC-C-CcHH-HHHHHHHH
Confidence 45689999999999864 99999999998887544443333 3434543 5555432 1 1110 00111122
Q ss_pred CcccCCC--CcEEEEcCCCCccccCccCccc
Q 002143 770 EGVLGME--SAVVIIDDSVRVWPHNKLNLIV 798 (960)
Q Consensus 770 srVLGrd--s~VVIVDDsp~vw~~qpdN~I~ 798 (960)
. .++.. ..+|+|+|+..-...-..+++.
T Consensus 263 ~-~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 263 W-KHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp H-HHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred H-HHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 2 23333 3357899997544332334544
No 206
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=57.09 E-value=3.6 Score=39.02 Aligned_cols=15 Identities=47% Similarity=0.629 Sum_probs=13.3
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
..+++||||||+++.
T Consensus 5 k~iifDlDGTL~d~~ 19 (209)
T 2hdo_A 5 QALMFDIDGTLTNSQ 19 (209)
T ss_dssp SEEEECSBTTTEECH
T ss_pred cEEEEcCCCCCcCCH
Confidence 479999999999985
No 207
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=57.07 E-value=3.9 Score=39.42 Aligned_cols=16 Identities=38% Similarity=0.580 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
.+.+++||||||+.+.
T Consensus 4 ~k~viFDlDGTL~d~~ 19 (210)
T 2ah5_A 4 ITAIFFDLDGTLVDSS 19 (210)
T ss_dssp CCEEEECSBTTTEECH
T ss_pred CCEEEEcCCCcCccCH
Confidence 3579999999999975
No 208
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=57.03 E-value=3.7 Score=38.91 Aligned_cols=14 Identities=29% Similarity=0.470 Sum_probs=12.7
Q ss_pred EEEEeCCCceeecc
Q 002143 648 CLVLDLDHTLLNSA 661 (960)
Q Consensus 648 TLVLDLDETLVHSs 661 (960)
.+++||||||+.+.
T Consensus 3 ~iiFDlDGTL~d~~ 16 (201)
T 2w43_A 3 ILAFDIFGTVLDTS 16 (201)
T ss_dssp EEEECCBTTTEEGG
T ss_pred EEEEeCCCceecch
Confidence 68999999999985
No 209
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=56.95 E-value=3.4 Score=38.89 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
-+.+++||||||+.+.
T Consensus 9 ~k~i~fDlDGTL~~~~ 24 (226)
T 1te2_A 9 ILAAIFDMDGLLIDSE 24 (226)
T ss_dssp CCEEEECCBTTTBCCH
T ss_pred CCEEEECCCCCcCcCH
Confidence 3579999999999875
No 210
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=56.62 E-value=4.1 Score=38.12 Aligned_cols=16 Identities=25% Similarity=0.501 Sum_probs=13.4
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
-+.+++||||||+.+.
T Consensus 4 ik~i~fDlDGTL~d~~ 19 (219)
T 3kd3_A 4 MKNIIFDFDSTLIKKE 19 (219)
T ss_dssp CEEEEECCCCCCBSSC
T ss_pred ceEEEEeCCCCCcCcc
Confidence 3578999999999864
No 211
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=56.58 E-value=3 Score=39.30 Aligned_cols=15 Identities=27% Similarity=0.525 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||+.+.
T Consensus 3 k~i~fDlDGTL~d~~ 17 (221)
T 2wf7_A 3 KAVLFDLDGVITDTA 17 (221)
T ss_dssp CEEEECCBTTTBTHH
T ss_pred cEEEECCCCcccCCh
Confidence 468999999999875
No 212
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=56.42 E-value=3.5 Score=39.26 Aligned_cols=16 Identities=44% Similarity=0.501 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+.+.
T Consensus 4 ~k~i~fDlDGTL~d~~ 19 (226)
T 3mc1_A 4 YNYVLFDLDGTLTDSA 19 (226)
T ss_dssp CCEEEECSBTTTBCCH
T ss_pred CCEEEEeCCCccccCH
Confidence 3579999999999875
No 213
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=56.33 E-value=3.5 Score=38.88 Aligned_cols=16 Identities=25% Similarity=0.353 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+++.
T Consensus 8 ik~i~fDlDGTL~~~~ 23 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNE 23 (234)
T ss_dssp CCEEEECCBTTTBCCH
T ss_pred ccEEEEeCCCCCccCc
Confidence 3579999999999875
No 214
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=56.16 E-value=3.5 Score=39.23 Aligned_cols=15 Identities=27% Similarity=0.425 Sum_probs=13.3
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||+++.
T Consensus 5 k~i~fDlDGTL~d~~ 19 (229)
T 2fdr_A 5 DLIIFDCDGVLVDSE 19 (229)
T ss_dssp SEEEECSBTTTBCCH
T ss_pred cEEEEcCCCCcCccH
Confidence 579999999999875
No 215
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=56.04 E-value=7.4 Score=38.03 Aligned_cols=17 Identities=29% Similarity=0.630 Sum_probs=14.6
Q ss_pred CCeEEEEeCCCceeecc
Q 002143 645 RKLCLVLDLDHTLLNSA 661 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs 661 (960)
....+++||||||+.+.
T Consensus 10 ~~k~viFDlDGTL~ds~ 26 (231)
T 2p11_A 10 HDIVFLFDCDNTLLDND 26 (231)
T ss_dssp CSEEEEECCBTTTBCHH
T ss_pred CCeEEEEcCCCCCEecH
Confidence 45689999999999985
No 216
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=55.91 E-value=3.8 Score=38.80 Aligned_cols=16 Identities=25% Similarity=0.316 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+.+.
T Consensus 5 ~k~iiFDlDGTL~d~~ 20 (211)
T 2i6x_A 5 IRNIVFDLGGVLIHLN 20 (211)
T ss_dssp CSEEEECSBTTTEEEC
T ss_pred ceEEEEeCCCeeEecc
Confidence 3579999999999985
No 217
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=55.44 E-value=3.6 Score=40.36 Aligned_cols=16 Identities=31% Similarity=0.200 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
.+.+++||||||+++.
T Consensus 13 ~k~iifDlDGTL~d~~ 28 (251)
T 2pke_A 13 IQLVGFDGDDTLWKSE 28 (251)
T ss_dssp CCEEEECCBTTTBCCH
T ss_pred eeEEEEeCCCCCccCc
Confidence 3579999999999875
No 218
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=55.34 E-value=4 Score=39.23 Aligned_cols=15 Identities=27% Similarity=0.317 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
..+++||||||+.+.
T Consensus 5 k~viFDlDGTL~d~~ 19 (232)
T 1zrn_A 5 KGIAFDLYGTLFDVH 19 (232)
T ss_dssp CEEEECSBTTTEETH
T ss_pred eEEEEecCCcccCch
Confidence 479999999999875
No 219
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=55.21 E-value=4.2 Score=39.32 Aligned_cols=16 Identities=44% Similarity=0.588 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+|+||||||+.+.
T Consensus 4 ~k~viFDlDGTL~d~~ 19 (232)
T 3fvv_A 4 RRLALFDLDHTLLPLD 19 (232)
T ss_dssp CEEEEECCBTTTBSSC
T ss_pred CcEEEEeCCCCCcCCc
Confidence 4678999999999875
No 220
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=55.08 E-value=2.7 Score=40.20 Aligned_cols=78 Identities=26% Similarity=0.234 Sum_probs=48.4
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCCCceeeeeeeecCCCCCCCCCCCCCCccccCCcccCCC-C
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-S 777 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~g~lF~~RIySRddc~~~~dGder~~yiKDLsrVLGrd-s 777 (960)
+...|++.++|+++.+.|.++|.|++... ++.+.-. .+|.. +++.+++.. .+.. ...+.+=++ .+|.+ +
T Consensus 104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~-~~f~~-~~~~~~~~~-~kp~-~~~~~~~~~-~~~~~~~ 173 (230)
T 3vay_A 104 VQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLA-DYFAF-ALCAEDLGI-GKPD-PAPFLEALR-RAKVDAS 173 (230)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTG-GGCSE-EEEHHHHTC-CTTS-HHHHHHHHH-HHTCCGG
T ss_pred CccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcH-HHeee-eEEccccCC-CCcC-HHHHHHHHH-HhCCCch
Confidence 56889999999999988999999999875 3333322 24654 444433211 1100 001222222 45776 8
Q ss_pred cEEEEcCCC
Q 002143 778 AVVIIDDSV 786 (960)
Q Consensus 778 ~VVIVDDsp 786 (960)
.+|+|+|+.
T Consensus 174 ~~~~vGD~~ 182 (230)
T 3vay_A 174 AAVHVGDHP 182 (230)
T ss_dssp GEEEEESCT
T ss_pred heEEEeCCh
Confidence 899999996
No 221
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=54.95 E-value=3.6 Score=39.51 Aligned_cols=15 Identities=27% Similarity=0.554 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
..+++||||||+.+.
T Consensus 3 k~i~fDlDGTL~d~~ 17 (233)
T 3nas_A 3 KAVIFDLDGVITDTA 17 (233)
T ss_dssp CEEEECSBTTTBCHH
T ss_pred cEEEECCCCCcCCCH
Confidence 478999999999875
No 222
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=54.87 E-value=3.6 Score=39.09 Aligned_cols=15 Identities=27% Similarity=0.291 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||+.+.
T Consensus 5 k~i~fDlDGTL~d~~ 19 (235)
T 2om6_A 5 KLVTFDVWNTLLDLN 19 (235)
T ss_dssp CEEEECCBTTTBCHH
T ss_pred eEEEEeCCCCCCCcc
Confidence 478999999999874
No 223
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=54.68 E-value=4.7 Score=38.79 Aligned_cols=18 Identities=39% Similarity=0.525 Sum_probs=15.1
Q ss_pred CCCeEEEEeCCCceeecc
Q 002143 644 ARKLCLVLDLDHTLLNSA 661 (960)
Q Consensus 644 ~kKLTLVLDLDETLVHSs 661 (960)
.+-..+++||||||+.+.
T Consensus 17 ~~ik~i~fDlDGTL~d~~ 34 (237)
T 4ex6_A 17 AADRGVILDLDGTLADTP 34 (237)
T ss_dssp CCCEEEEECSBTTTBCCH
T ss_pred ccCCEEEEcCCCCCcCCH
Confidence 455689999999999875
No 224
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=54.40 E-value=4.6 Score=38.36 Aligned_cols=16 Identities=38% Similarity=0.607 Sum_probs=13.9
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+.+.
T Consensus 6 ~k~i~fDlDGTL~~~~ 21 (233)
T 3s6j_A 6 QTSFIFDLDGTLTDSV 21 (233)
T ss_dssp CCEEEECCBTTTEECH
T ss_pred CcEEEEcCCCccccCh
Confidence 4689999999999874
No 225
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=54.29 E-value=4.3 Score=38.16 Aligned_cols=16 Identities=25% Similarity=0.331 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+.+.
T Consensus 4 ~k~viFDlDGTL~d~~ 19 (200)
T 3cnh_A 4 IKALFWDIGGVLLTNG 19 (200)
T ss_dssp CCEEEECCBTTTBCCS
T ss_pred ceEEEEeCCCeeECCC
Confidence 3579999999999874
No 226
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=54.06 E-value=4.1 Score=38.88 Aligned_cols=16 Identities=31% Similarity=0.482 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+++.
T Consensus 7 ~k~i~fDlDGTL~d~~ 22 (238)
T 3ed5_A 7 YRTLLFDVDDTILDFQ 22 (238)
T ss_dssp CCEEEECCBTTTBCHH
T ss_pred CCEEEEcCcCcCcCCc
Confidence 4579999999999875
No 227
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=52.88 E-value=4.3 Score=40.85 Aligned_cols=15 Identities=40% Similarity=0.592 Sum_probs=12.7
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||+.+.
T Consensus 1 ~li~~DlDGTLl~~~ 15 (259)
T 3zx4_A 1 MIVFTDLDGTLLDER 15 (259)
T ss_dssp CEEEECCCCCCSCSS
T ss_pred CEEEEeCCCCCcCCC
Confidence 368999999999874
No 228
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=52.82 E-value=4.5 Score=39.69 Aligned_cols=15 Identities=27% Similarity=0.605 Sum_probs=13.3
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
..+++||||||+.+.
T Consensus 5 k~viFDlDGTL~ds~ 19 (240)
T 2hi0_A 5 KAAIFDMDGTILDTS 19 (240)
T ss_dssp SEEEECSBTTTEECH
T ss_pred cEEEEecCCCCccCH
Confidence 478999999999985
No 229
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=52.81 E-value=4 Score=38.79 Aligned_cols=16 Identities=25% Similarity=0.175 Sum_probs=13.7
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
-..+++||||||+++.
T Consensus 6 ~k~i~fD~DGTL~d~~ 21 (240)
T 3smv_A 6 FKALTFDCYGTLIDWE 21 (240)
T ss_dssp CSEEEECCBTTTBCHH
T ss_pred ceEEEEeCCCcCcCCc
Confidence 3579999999999875
No 230
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=52.23 E-value=4.4 Score=38.64 Aligned_cols=15 Identities=40% Similarity=0.576 Sum_probs=13.3
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||+++.
T Consensus 3 k~i~fDlDGTL~~~~ 17 (230)
T 3vay_A 3 KLVTFDLDDTLWDTA 17 (230)
T ss_dssp CEEEECCBTTTBCSH
T ss_pred eEEEecCcccCcCCc
Confidence 479999999999885
No 231
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=52.00 E-value=4.9 Score=38.98 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=14.3
Q ss_pred CCeEEEEeCCCceeecc
Q 002143 645 RKLCLVLDLDHTLLNSA 661 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs 661 (960)
....+++||||||+++.
T Consensus 21 ~ik~i~fDlDGTL~d~~ 37 (254)
T 3umc_A 21 GMRAILFDVFGTLVDWR 37 (254)
T ss_dssp SCCEEEECCBTTTEEHH
T ss_pred CCcEEEEeCCCccEecC
Confidence 35689999999999874
No 232
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=51.59 E-value=5.4 Score=39.44 Aligned_cols=16 Identities=44% Similarity=0.411 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+.+.
T Consensus 23 ~k~iiFDlDGTL~d~~ 38 (243)
T 2hsz_A 23 FKLIGFDLDGTLVNSL 38 (243)
T ss_dssp CSEEEECSBTTTEECH
T ss_pred CCEEEEcCCCcCCCCH
Confidence 3479999999999985
No 233
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=51.52 E-value=4.5 Score=39.85 Aligned_cols=16 Identities=6% Similarity=0.077 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
.+.+++||||||+++.
T Consensus 6 ik~i~fDlDGTLld~~ 21 (267)
T 1swv_A 6 IEAVIFAWAGTTVDYG 21 (267)
T ss_dssp CCEEEECSBTTTBSTT
T ss_pred ceEEEEecCCCEEeCC
Confidence 3579999999999974
No 234
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=51.48 E-value=6.1 Score=38.82 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=14.5
Q ss_pred CCeEEEEeCCCceeecc
Q 002143 645 RKLCLVLDLDHTLLNSA 661 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs 661 (960)
...++++||||||+.+.
T Consensus 27 ~ik~i~fDlDGTL~d~~ 43 (259)
T 4eek_A 27 PFDAVLFDLDGVLVESE 43 (259)
T ss_dssp CCSEEEEESBTTTEECH
T ss_pred CCCEEEECCCCCcccCH
Confidence 45689999999999875
No 235
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=51.08 E-value=5.9 Score=37.84 Aligned_cols=16 Identities=25% Similarity=0.214 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+++.
T Consensus 4 ~k~i~FDlDGTL~d~~ 19 (233)
T 3umb_A 4 IRAVVFDAYGTLFDVY 19 (233)
T ss_dssp CCEEEECSBTTTEETH
T ss_pred ceEEEEeCCCcccccH
Confidence 4579999999999874
No 236
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=51.07 E-value=4.5 Score=39.47 Aligned_cols=15 Identities=33% Similarity=0.660 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
..+++||||||+.+.
T Consensus 3 k~iiFDlDGTL~d~~ 17 (241)
T 2hoq_A 3 KVIFFDLDDTLVDTS 17 (241)
T ss_dssp CEEEECSBTTTBCHH
T ss_pred cEEEEcCCCCCCCCh
Confidence 378999999999885
No 237
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=51.07 E-value=4.6 Score=38.52 Aligned_cols=15 Identities=20% Similarity=0.064 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||+.+.
T Consensus 3 k~i~fDlDGTL~d~~ 17 (234)
T 3u26_A 3 RAVFFDSLGTLNSVE 17 (234)
T ss_dssp CEEEECSTTTTBCHH
T ss_pred cEEEEcCCCcccccc
Confidence 478999999999875
No 238
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=51.01 E-value=4.7 Score=40.25 Aligned_cols=15 Identities=27% Similarity=0.543 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||+.|.
T Consensus 27 KaViFDlDGTLvDs~ 41 (250)
T 4gib_A 27 EAFIFDLDGVITDTA 41 (250)
T ss_dssp CEEEECTBTTTBCCH
T ss_pred heeeecCCCcccCCH
Confidence 579999999999864
No 239
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=50.86 E-value=4.5 Score=38.88 Aligned_cols=17 Identities=12% Similarity=0.088 Sum_probs=14.2
Q ss_pred CCeEEEEeCCCceeecc
Q 002143 645 RKLCLVLDLDHTLLNSA 661 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs 661 (960)
..+.+++||||||+++.
T Consensus 14 ~~k~i~fDlDGTL~d~~ 30 (254)
T 3umg_A 14 NVRAVLFDTFGTVVDWR 30 (254)
T ss_dssp BCCEEEECCBTTTBCHH
T ss_pred CceEEEEeCCCceecCc
Confidence 34689999999999874
No 240
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=50.61 E-value=5.3 Score=38.81 Aligned_cols=16 Identities=31% Similarity=0.216 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+.+.
T Consensus 14 ~k~viFDlDGTL~d~~ 29 (240)
T 2no4_A 14 LRACVFDAYGTLLDVH 29 (240)
T ss_dssp CCEEEECCBTTTBCTT
T ss_pred ccEEEEeCCCcccccH
Confidence 4589999999999874
No 241
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=50.52 E-value=5.5 Score=38.96 Aligned_cols=17 Identities=29% Similarity=0.493 Sum_probs=14.4
Q ss_pred CCeEEEEeCCCceeecc
Q 002143 645 RKLCLVLDLDHTLLNSA 661 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs 661 (960)
....+++||||||+++.
T Consensus 29 ~ik~i~fDlDGTL~d~~ 45 (250)
T 3l5k_A 29 PVTHLIFDMDGLLLDTE 45 (250)
T ss_dssp CCSEEEEETBTTTBCHH
T ss_pred CCcEEEEcCCCCcCCCH
Confidence 45689999999999874
No 242
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=50.45 E-value=5.7 Score=38.45 Aligned_cols=16 Identities=31% Similarity=0.397 Sum_probs=13.9
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+.+.
T Consensus 29 ik~iifDlDGTL~d~~ 44 (240)
T 3sd7_A 29 YEIVLFDLDGTLTDPK 44 (240)
T ss_dssp CSEEEECSBTTTEECH
T ss_pred ccEEEEecCCcCccCH
Confidence 3689999999999875
No 243
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=49.92 E-value=5.9 Score=38.34 Aligned_cols=15 Identities=20% Similarity=0.386 Sum_probs=13.4
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
..+++||||||+.+.
T Consensus 4 k~viFDlDGTL~d~~ 18 (220)
T 2zg6_A 4 KAVLVDFGNTLVGFK 18 (220)
T ss_dssp CEEEECSBTTTEEEE
T ss_pred eEEEEcCCCceeccc
Confidence 479999999999885
No 244
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=49.25 E-value=5.3 Score=38.02 Aligned_cols=16 Identities=31% Similarity=0.345 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
...+++||||||+.+.
T Consensus 5 ~k~i~fDlDGTL~d~~ 20 (240)
T 3qnm_A 5 YKNLFFDLDDTIWAFS 20 (240)
T ss_dssp CSEEEECCBTTTBCHH
T ss_pred ceEEEEcCCCCCcCch
Confidence 4579999999999875
No 245
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=48.65 E-value=6 Score=38.51 Aligned_cols=17 Identities=29% Similarity=0.524 Sum_probs=14.2
Q ss_pred CCeEEEEeCCCceeecc
Q 002143 645 RKLCLVLDLDHTLLNSA 661 (960)
Q Consensus 645 kKLTLVLDLDETLVHSs 661 (960)
....+++||||||+.+.
T Consensus 23 ~~k~i~fDlDGTL~d~~ 39 (243)
T 3qxg_A 23 KLKAVLFDMDGVLFNSM 39 (243)
T ss_dssp CCCEEEECSBTTTBCCH
T ss_pred cCCEEEEcCCCCCCCCH
Confidence 34689999999999875
No 246
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=48.50 E-value=5.7 Score=40.10 Aligned_cols=15 Identities=27% Similarity=0.383 Sum_probs=13.4
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
..+++||||||+++.
T Consensus 36 k~iifDlDGTLlds~ 50 (275)
T 2qlt_A 36 NAALFDVDGTIIISQ 50 (275)
T ss_dssp SEEEECCBTTTEECH
T ss_pred CEEEECCCCCCCCCH
Confidence 578999999999985
No 247
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=46.91 E-value=6.5 Score=38.21 Aligned_cols=15 Identities=47% Similarity=0.722 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
..+++||||||+.+.
T Consensus 4 k~viFDlDGTL~d~~ 18 (222)
T 2nyv_A 4 RVILFDLDGTLIDSA 18 (222)
T ss_dssp CEEEECTBTTTEECH
T ss_pred CEEEECCCCcCCCCH
Confidence 378999999999875
No 248
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=46.78 E-value=4.7 Score=41.57 Aligned_cols=81 Identities=15% Similarity=0.209 Sum_probs=51.9
Q ss_pred EeeccCHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhcCC----------CceeeeeeeecCCCCCCCCCCCCCCcccc
Q 002143 699 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPK----------GVLFAGRVISRGDDGDPFDGDERVPKSKD 768 (960)
Q Consensus 699 VkLRPgL~EFLeeLSk~YEIvIyTAgtreYAd~VLdiLDP~----------g~lF~~RIySRddc~~~~dGder~~yiKD 768 (960)
+.+.||+.++|++ .|.++|.|++.+..+..+++.+... ..+|.. +|....++ .+. +...|.+=
T Consensus 124 ~~~~pgv~e~L~~---g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~-~f~~~~~g--~KP-~p~~~~~a 196 (253)
T 2g80_A 124 APVYADAIDFIKR---KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDG-YFDINTSG--KKT-ETQSYANI 196 (253)
T ss_dssp BCCCHHHHHHHHH---CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCE-EECHHHHC--CTT-CHHHHHHH
T ss_pred CCCCCCHHHHHHc---CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcce-EEeeeccC--CCC-CHHHHHHH
Confidence 5678999999999 7999999999999999998865211 012332 33211001 011 11134444
Q ss_pred CCcccCCC-CcEEEEcCCCC
Q 002143 769 LEGVLGME-SAVVIIDDSVR 787 (960)
Q Consensus 769 LsrVLGrd-s~VVIVDDsp~ 787 (960)
++ .+|.. +.+|+|+|++.
T Consensus 197 ~~-~lg~~p~~~l~vgDs~~ 215 (253)
T 2g80_A 197 LR-DIGAKASEVLFLSDNPL 215 (253)
T ss_dssp HH-HHTCCGGGEEEEESCHH
T ss_pred HH-HcCCCcccEEEEcCCHH
Confidence 44 46766 89999999974
No 249
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=46.04 E-value=14 Score=41.00 Aligned_cols=51 Identities=4% Similarity=-0.041 Sum_probs=41.2
Q ss_pred EEeeccCHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhcC-----CCceeeeeee
Q 002143 698 WTKLRPGIWTFLERASK-LFEMHLYTMGNKLYATEMAKVLDP-----KGVLFAGRVI 748 (960)
Q Consensus 698 yVkLRPgL~EFLeeLSk-~YEIvIyTAgtreYAd~VLdiLDP-----~g~lF~~RIy 748 (960)
.++++|+..++++.|.. -++++|.|+|...++++|++.|.. ...+++.|+.
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~ 275 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLM 275 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEE
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEE
Confidence 36789999999999986 499999999999999999997742 2235666554
No 250
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=45.92 E-value=5.8 Score=40.10 Aligned_cols=20 Identities=35% Similarity=0.484 Sum_probs=16.2
Q ss_pred hcCCCeEEEEeCCCceeecc
Q 002143 642 FSARKLCLVLDLDHTLLNSA 661 (960)
Q Consensus 642 ls~kKLTLVLDLDETLVHSs 661 (960)
-..+...+++||||||+.+.
T Consensus 14 ~~~~~k~viFDlDGTLvds~ 33 (260)
T 2gfh_A 14 GLSRVRAVFFDLDNTLIDTA 33 (260)
T ss_dssp ECCCCCEEEECCBTTTBCHH
T ss_pred ccccceEEEEcCCCCCCCCH
Confidence 34556689999999999885
No 251
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=45.63 E-value=12 Score=38.82 Aligned_cols=41 Identities=12% Similarity=0.172 Sum_probs=36.9
Q ss_pred EEeeccCHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhcC
Q 002143 698 WTKLRPGIWTFLERASKL-FEMHLYTMGNKLYATEMAKVLDP 738 (960)
Q Consensus 698 yVkLRPgL~EFLeeLSk~-YEIvIyTAgtreYAd~VLdiLDP 738 (960)
-+.+|||+.+|++.|.+. +.++|+|.+...++++|++.+..
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~ 180 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGV 180 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTC
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCC
Confidence 378999999999999965 89999999999999999998753
No 252
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=43.01 E-value=7.5 Score=38.68 Aligned_cols=15 Identities=27% Similarity=0.510 Sum_probs=12.8
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
+.+++||||||+.|.
T Consensus 6 KaViFDlDGTL~Ds~ 20 (243)
T 4g9b_A 6 QGVIFDLDGVITDTA 20 (243)
T ss_dssp CEEEECSBTTTBCCH
T ss_pred cEEEEcCCCcccCCH
Confidence 468999999999874
No 253
>3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A
Probab=42.62 E-value=49 Score=35.47 Aligned_cols=80 Identities=13% Similarity=0.101 Sum_probs=48.1
Q ss_pred HHHHhhhcCcee---eeeecccCCCCCCCChhHHHHHHHhCCEEecc-----cCC---------------CccEEEecCC
Q 002143 864 AEQRKILAGCRI---VFSRVFPVGEANPHLHPLWQTAEQFGAVCTKH-----IDD---------------QVTHVVANSL 920 (960)
Q Consensus 864 elRrqILkGcvI---vFSG~fP~~~~npe~~~LwklAe~LGAtVssd-----Vd~---------------kVTHLVAss~ 920 (960)
..+.++|.|+.| -++--+|.+. ..+..+++.+||+-... ++. ...+++.+..
T Consensus 130 ~~~gkLf~~~~I~ciNls~dI~GG~-----e~issIleahG~~~~~~l~~~~~~~~dl~~n~~~~~~~~~~~~~ILia~K 204 (256)
T 3t7k_A 130 KLPTKVFERANIRCINLVNDIPGGV-----DTIGSVLKAHGIEKINVLRSKKCTFEDIIPNDVSKQENGGIFKYVLIVTK 204 (256)
T ss_dssp TSSSCHHHHTTCCEEEEETTCTTCH-----HHHHHHHHHTTCCEEEEECTTTCCGGGCCCCC--------CCSEEEECSC
T ss_pred ccccccccCCcceeeeeccCCCCCH-----HHHHHHHHHcCCceeeecccccccHHHhhhccccccccCCCCCEEEEEcc
Confidence 334468999854 3355455542 46778899999963222 221 2335555443
Q ss_pred C--CHHHHHHHh-----CCCcEEcHHHHHHHHHhc
Q 002143 921 G--TDKVNWALS-----TGRFVVHPGWVEASALLY 948 (960)
Q Consensus 921 g--T~Kv~~Alk-----~GI~IVSpdWLedC~~~w 948 (960)
. ..+++...+ ..+.+|.++|...|+...
T Consensus 205 ~~q~k~Fkk~~~~~~~n~~~lvveWdWCVksIF~l 239 (256)
T 3t7k_A 205 ASQVKKFTKLINDRDKNETILIVEWNWCVESIFHL 239 (256)
T ss_dssp HHHHHHHHHHHHHHSTTSCEEEECHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhcccccceEEEEEcHHHHHHHhhe
Confidence 2 224444432 357999999999999854
No 254
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=41.45 E-value=8.8 Score=38.36 Aligned_cols=15 Identities=33% Similarity=0.337 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
..+++||||||+++.
T Consensus 2 k~iiFDlDGTL~d~~ 16 (263)
T 3k1z_A 2 RLLTWDVKDTLLRLR 16 (263)
T ss_dssp CEEEECCBTTTEEES
T ss_pred cEEEEcCCCceeCCC
Confidence 368999999999975
No 255
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=41.28 E-value=10 Score=37.42 Aligned_cols=15 Identities=27% Similarity=0.383 Sum_probs=13.0
Q ss_pred CeEEEEeCCCceeec
Q 002143 646 KLCLVLDLDHTLLNS 660 (960)
Q Consensus 646 KLTLVLDLDETLVHS 660 (960)
...+|+||||||+.+
T Consensus 6 ~k~viFD~DGTL~d~ 20 (236)
T 2fea_A 6 KPFIICDFDGTITMN 20 (236)
T ss_dssp CEEEEECCTTTTBSS
T ss_pred CcEEEEeCCCCCCcc
Confidence 458999999999965
No 256
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=39.56 E-value=9 Score=40.39 Aligned_cols=14 Identities=7% Similarity=0.097 Sum_probs=0.0
Q ss_pred eEEEEeCCCceeec
Q 002143 647 LCLVLDLDHTLLNS 660 (960)
Q Consensus 647 LTLVLDLDETLVHS 660 (960)
+.+++||||||+.+
T Consensus 22 kli~fDlDGTLld~ 35 (332)
T 1y8a_A 22 HMFFTDWEGPWILT 35 (332)
T ss_dssp CEEEECSBTTTBCC
T ss_pred eEEEEECcCCCcCc
No 257
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=36.52 E-value=10 Score=38.68 Aligned_cols=16 Identities=25% Similarity=0.293 Sum_probs=13.9
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
-..++|||||||+.+.
T Consensus 10 ikaviFDlDGTL~ds~ 25 (261)
T 1yns_A 10 VTVILLDIEGTTTPIA 25 (261)
T ss_dssp CCEEEECCBTTTBCHH
T ss_pred CCEEEEecCCCccchh
Confidence 4589999999999874
No 258
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=33.73 E-value=12 Score=38.42 Aligned_cols=16 Identities=19% Similarity=0.233 Sum_probs=13.8
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
-..++|||||||+.+.
T Consensus 31 ikaviFDlDGTLvDs~ 46 (253)
T 2g80_A 31 YSTYLLDIEGTVCPIS 46 (253)
T ss_dssp CSEEEECCBTTTBCTH
T ss_pred CcEEEEcCCCCccccc
Confidence 3589999999999974
No 259
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=31.08 E-value=7.8 Score=35.86 Aligned_cols=16 Identities=31% Similarity=0.407 Sum_probs=13.1
Q ss_pred CeEEEEeCCCceeecc
Q 002143 646 KLCLVLDLDHTLLNSA 661 (960)
Q Consensus 646 KLTLVLDLDETLVHSs 661 (960)
|+.+++||||||+++.
T Consensus 9 k~ivifDlDGTL~d~~ 24 (201)
T 4ap9_A 9 KKVAVIDIEGTLTDFE 24 (201)
T ss_dssp SCEEEEECBTTTBCCC
T ss_pred ceeEEecccCCCcchH
Confidence 5666699999999764
No 260
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=28.24 E-value=21 Score=36.74 Aligned_cols=15 Identities=20% Similarity=0.297 Sum_probs=13.4
Q ss_pred eEEEEeCCCceeecc
Q 002143 647 LCLVLDLDHTLLNSA 661 (960)
Q Consensus 647 LTLVLDLDETLVHSs 661 (960)
.++++|+||||+.+.
T Consensus 33 ~~viFD~dGTL~ds~ 47 (287)
T 3a1c_A 33 TAVIFDKTGTLTKGK 47 (287)
T ss_dssp CEEEEECCCCCBCSC
T ss_pred CEEEEeCCCCCcCCC
Confidence 479999999999985
Done!