Query 002149
Match_columns 959
No_of_seqs 803 out of 6298
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 14:25:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002149.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002149hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 4.9E-52 1.7E-56 448.0 19.3 262 611-895 13-290 (299)
2 4aoj_A High affinity nerve gro 100.0 1.6E-51 5.4E-56 450.4 23.4 262 611-895 41-320 (329)
3 3omv_A RAF proto-oncogene seri 100.0 2.5E-51 8.5E-56 442.1 24.1 261 611-894 36-300 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 1.6E-51 5.3E-56 446.1 19.9 259 612-892 27-304 (308)
5 4b9d_A Serine/threonine-protei 100.0 7.8E-51 2.7E-55 444.2 19.5 252 611-887 24-276 (350)
6 4fih_A Serine/threonine-protei 100.0 1.2E-50 4.2E-55 441.9 20.5 257 611-897 74-331 (346)
7 3fpq_A Serine/threonine-protei 100.0 1E-49 3.5E-54 426.4 23.1 251 614-894 29-287 (290)
8 4g3f_A NF-kappa-beta-inducing 100.0 1.1E-49 3.7E-54 433.3 19.6 257 611-898 58-320 (336)
9 4fie_A Serine/threonine-protei 100.0 2E-49 6.8E-54 443.0 21.8 258 610-897 150-408 (423)
10 4ase_A Vascular endothelial gr 100.0 1.5E-49 5.1E-54 438.1 19.6 267 610-897 63-350 (353)
11 3hmm_A TGF-beta receptor type- 100.0 2.9E-49 9.8E-54 429.8 19.9 273 611-895 3-298 (303)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.3E-49 4.4E-54 427.3 16.5 250 611-887 32-284 (311)
13 3hyh_A Carbon catabolite-derep 100.0 1.1E-48 3.8E-53 414.6 19.6 252 611-894 13-267 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 3E-49 1E-53 424.7 12.1 244 611-882 24-271 (304)
15 4b99_A Mitogen-activated prote 100.0 1.1E-47 3.7E-52 430.9 22.6 313 610-933 53-389 (398)
16 4g31_A Eukaryotic translation 100.0 2E-46 7E-51 405.0 20.7 256 611-894 5-284 (299)
17 4f9c_A Cell division cycle 7-r 100.0 4E-45 1.4E-49 405.9 21.6 203 606-823 16-252 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 8.2E-43 2.8E-47 411.0 23.9 257 610-895 156-416 (573)
19 2qkw_B Protein kinase; three-h 100.0 3.1E-43 1.1E-47 388.6 18.4 285 603-895 31-316 (321)
20 3v5w_A G-protein coupled recep 100.0 5.7E-43 2E-47 407.5 19.3 255 611-894 189-454 (689)
21 4ecn_A Leucine-rich repeat pro 100.0 4.5E-42 1.5E-46 420.0 22.9 280 35-331 265-687 (876)
22 3uim_A Brassinosteroid insensi 100.0 1.5E-42 5.2E-47 384.1 15.6 289 599-891 18-308 (326)
23 3p86_A Serine/threonine-protei 100.0 6.9E-42 2.4E-46 374.9 20.2 265 610-898 36-302 (309)
24 4eco_A Uncharacterized protein 100.0 9.8E-42 3.3E-46 411.0 20.8 409 36-464 27-603 (636)
25 3fe3_A MAP/microtubule affinit 100.0 2.7E-41 9.3E-46 372.7 21.9 256 610-896 14-271 (328)
26 3fxz_A Serine/threonine-protei 100.0 4E-41 1.4E-45 367.0 22.9 256 610-895 19-275 (297)
27 3oz6_A Mitogen-activated prote 100.0 2E-41 6.8E-46 384.3 20.8 315 607-934 5-375 (388)
28 2psq_A Fibroblast growth facto 100.0 6E-41 2E-45 377.0 24.3 266 610-897 80-367 (370)
29 2izr_A Casein kinase I isoform 100.0 5.3E-41 1.8E-45 372.1 23.2 281 610-914 8-301 (330)
30 3soc_A Activin receptor type-2 100.0 2.7E-41 9.1E-46 373.0 19.6 273 610-896 23-320 (322)
31 3op5_A Serine/threonine-protei 100.0 8.8E-41 3E-45 375.6 22.7 285 610-910 34-345 (364)
32 3s95_A LIMK-1, LIM domain kina 100.0 1.7E-40 6E-45 364.7 24.5 263 611-898 10-286 (310)
33 1csn_A Casein kinase-1; phosph 100.0 2E-40 6.7E-45 362.1 24.6 276 610-908 9-297 (298)
34 3zgw_A Maternal embryonic leuc 100.0 6E-41 2.1E-45 371.9 20.7 258 608-895 7-266 (347)
35 2c30_A Serine/threonine-protei 100.0 2.2E-40 7.5E-45 365.2 24.0 265 601-895 25-300 (321)
36 3kul_A Ephrin type-A receptor 100.0 1.2E-40 4.2E-45 367.9 21.9 262 610-897 48-316 (325)
37 3ttj_A Mitogen-activated prote 100.0 1.3E-40 4.6E-45 384.6 23.0 304 610-930 61-398 (464)
38 3rgz_A Protein brassinosteroid 100.0 8.1E-41 2.8E-45 412.5 22.4 401 33-461 6-431 (768)
39 4hcu_A Tyrosine-protein kinase 100.0 7.9E-41 2.7E-45 359.4 19.6 257 611-895 10-267 (269)
40 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.9E-40 6.6E-45 356.2 22.5 258 610-895 7-265 (268)
41 1ogq_A PGIP-2, polygalacturona 100.0 1.9E-40 6.3E-45 364.1 22.2 290 35-439 2-302 (313)
42 2nru_A Interleukin-1 receptor- 100.0 7.8E-40 2.7E-44 359.0 27.1 285 599-894 13-306 (307)
43 3cbl_A C-FES, proto-oncogene t 100.0 6.1E-41 2.1E-45 378.3 18.3 261 610-896 113-376 (377)
44 1cm8_A Phosphorylated MAP kina 100.0 2.6E-40 8.9E-45 371.3 23.2 306 610-934 24-352 (367)
45 4eqm_A Protein kinase; transfe 100.0 2.3E-40 7.7E-45 360.5 21.1 266 610-897 10-278 (294)
46 3gen_A Tyrosine-protein kinase 100.0 2.2E-40 7.7E-45 358.8 20.0 258 610-895 23-281 (283)
47 2qol_A Ephrin receptor; recept 100.0 1.5E-40 5.1E-45 373.9 19.2 261 610-896 44-311 (373)
48 2fst_X Mitogen-activated prote 100.0 2.3E-40 8E-45 371.2 20.5 308 610-934 28-356 (367)
49 3lb7_A RAF proto-oncogene seri 100.0 6.7E-40 2.3E-44 358.9 23.7 264 610-896 35-302 (307)
50 3niz_A Rhodanese family protei 100.0 7.3E-40 2.5E-44 359.5 23.6 276 609-895 19-306 (311)
51 3ugc_A Tyrosine-protein kinase 100.0 1.3E-40 4.4E-45 363.0 16.3 273 610-896 9-293 (295)
52 3rp9_A Mitogen-activated prote 100.0 6E-40 2E-44 380.7 22.7 314 610-934 52-443 (458)
53 2yab_A Death-associated protei 100.0 1.4E-39 4.8E-44 363.3 24.5 253 609-887 10-272 (361)
54 3l9p_A Anaplastic lymphoma kin 100.0 3.9E-40 1.3E-44 370.1 19.7 265 610-896 70-347 (367)
55 3tt0_A Basic fibroblast growth 100.0 1.4E-39 4.8E-44 368.0 24.3 269 610-900 68-358 (382)
56 2bdw_A Hypothetical protein K1 100.0 8E-40 2.7E-44 366.4 22.1 256 608-888 26-285 (362)
57 4hgt_A Casein kinase I isoform 100.0 1.3E-39 4.4E-44 355.3 23.0 278 608-908 6-294 (296)
58 3soa_A Calcium/calmodulin-depe 100.0 7.5E-40 2.6E-44 375.1 22.2 256 608-887 8-267 (444)
59 1qcf_A Haematopoetic cell kina 100.0 3.2E-40 1.1E-44 381.7 18.8 259 610-896 187-446 (454)
60 1luf_A Muscle-specific tyrosin 100.0 6E-40 2E-44 366.0 20.3 268 608-897 44-338 (343)
61 1tki_A Titin; serine kinase, m 100.0 1.3E-39 4.3E-44 358.9 22.6 258 609-895 3-263 (321)
62 3n9x_A Phosphotransferase; mal 100.0 6.5E-40 2.2E-44 376.6 20.7 319 609-938 24-412 (432)
63 3o0g_A Cell division protein k 100.0 1.4E-39 4.7E-44 354.2 22.2 275 611-897 2-290 (292)
64 1o6l_A RAC-beta serine/threoni 100.0 1.3E-39 4.5E-44 360.2 22.2 249 611-887 5-260 (337)
65 3uzp_A CKI-delta, CKID, casein 100.0 1.8E-39 6.1E-44 354.1 22.8 277 609-908 7-294 (296)
66 3rgz_A Protein brassinosteroid 100.0 5.5E-40 1.9E-44 405.0 21.1 108 358-465 634-744 (768)
67 1mp8_A Focal adhesion kinase 1 100.0 1.1E-39 3.9E-44 352.8 21.0 260 610-896 14-278 (281)
68 2ivs_A Proto-oncogene tyrosine 100.0 1E-39 3.5E-44 359.3 20.9 265 610-896 22-313 (314)
69 3q4u_A Activin receptor type-1 100.0 8.3E-40 2.9E-44 357.7 20.1 260 609-892 6-300 (301)
70 3vhe_A Vascular endothelial gr 100.0 3.1E-40 1.1E-44 370.8 17.0 273 603-896 14-357 (359)
71 2jii_A Serine/threonine-protei 100.0 5.7E-40 2E-44 367.2 18.8 277 610-908 41-350 (352)
72 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.9E-40 2.7E-44 377.9 20.5 261 610-898 183-444 (452)
73 3c0i_A Peripheral plasma membr 100.0 1.5E-39 5.2E-44 363.1 22.1 262 610-894 23-291 (351)
74 3qup_A Tyrosine-protein kinase 100.0 1.1E-39 3.6E-44 360.7 20.5 268 610-898 22-302 (323)
75 4aw2_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44 376.2 17.1 270 602-894 65-343 (437)
76 3tki_A Serine/threonine-protei 100.0 8.4E-40 2.9E-44 360.7 19.2 259 610-895 6-267 (323)
77 1ob3_A PFPK5, cell division co 100.0 9.5E-40 3.2E-44 354.7 19.1 266 611-887 2-280 (288)
78 3v8s_A RHO-associated protein 100.0 4.3E-40 1.5E-44 372.7 16.9 266 604-895 62-335 (410)
79 1opk_A P150, C-ABL, proto-onco 100.0 5.7E-40 1.9E-44 383.2 18.2 257 610-893 219-477 (495)
80 2zv2_A Calcium/calmodulin-depe 100.0 1.2E-39 4.2E-44 355.8 19.5 251 610-887 12-292 (298)
81 3poz_A Epidermal growth factor 100.0 1.2E-39 4E-44 360.6 19.4 258 611-895 15-279 (327)
82 4agu_A Cyclin-dependent kinase 100.0 6.3E-39 2.1E-43 352.5 25.0 278 610-898 2-293 (311)
83 2y0a_A Death-associated protei 100.0 4.7E-39 1.6E-43 355.4 23.9 254 609-887 9-271 (326)
84 3gni_B Strad alpha; kinase fol 100.0 5.2E-39 1.8E-43 364.7 24.6 279 610-898 24-342 (389)
85 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.3E-39 4.4E-44 362.7 19.0 255 610-894 22-285 (353)
86 3t9t_A Tyrosine-protein kinase 100.0 1.3E-39 4.6E-44 349.4 18.5 257 611-895 8-265 (267)
87 3og7_A AKAP9-BRAF fusion prote 100.0 2.2E-39 7.4E-44 352.1 20.2 262 610-894 23-288 (289)
88 1t46_A HOMO sapiens V-KIT hard 100.0 2.1E-39 7.2E-44 356.6 20.3 267 610-897 22-310 (313)
89 3kmu_A ILK, integrin-linked ki 100.0 1.6E-39 5.3E-44 349.7 18.7 254 611-894 10-270 (271)
90 4euu_A Serine/threonine-protei 100.0 8.9E-39 3E-43 352.5 25.0 273 610-891 8-306 (319)
91 2vd5_A DMPK protein; serine/th 100.0 8.7E-40 3E-44 370.5 17.2 270 602-895 52-333 (412)
92 3dtc_A Mitogen-activated prote 100.0 2.4E-39 8E-44 348.3 19.7 253 610-892 6-271 (271)
93 3p1a_A MYT1 kinase, membrane-a 100.0 3.2E-39 1.1E-43 354.5 21.1 247 610-887 56-304 (311)
94 3qyz_A Mitogen-activated prote 100.0 6.8E-39 2.3E-43 360.2 24.1 311 610-934 26-359 (364)
95 2xrw_A Mitogen-activated prote 100.0 5E-39 1.7E-43 361.9 23.0 306 610-932 24-363 (371)
96 3kfa_A Tyrosine-protein kinase 100.0 1.7E-39 5.9E-44 352.8 18.3 260 610-896 12-273 (288)
97 3lxp_A Non-receptor tyrosine-p 100.0 4.3E-39 1.5E-43 354.7 21.5 275 611-898 30-314 (318)
98 1k9a_A Carboxyl-terminal SRC k 100.0 4E-39 1.4E-43 371.9 22.0 253 610-895 192-446 (450)
99 3dbq_A Dual specificity protei 100.0 2.7E-39 9.2E-44 360.3 19.8 259 610-896 8-280 (343)
100 4dc2_A Protein kinase C IOTA t 100.0 5.7E-39 1.9E-43 361.4 22.3 254 610-882 51-307 (396)
101 1kob_A Twitchin; kinase, intra 100.0 8.5E-39 2.9E-43 360.2 23.6 252 610-887 50-304 (387)
102 3sv0_A Casein kinase I-like; t 100.0 9.6E-39 3.3E-43 368.9 24.5 279 609-910 5-294 (483)
103 1rjb_A FL cytokine receptor; k 100.0 2.2E-39 7.5E-44 361.6 18.6 266 610-896 44-336 (344)
104 2pvf_A Fibroblast growth facto 100.0 7.7E-39 2.6E-43 355.4 22.9 267 610-898 34-322 (334)
105 1qpc_A LCK kinase; alpha beta 100.0 3.3E-39 1.1E-43 348.8 19.3 260 610-897 12-272 (279)
106 2pmi_A Negative RE, cyclin-dep 100.0 4.9E-39 1.7E-43 354.0 21.0 279 610-898 4-302 (317)
107 2eva_A TAK1 kinase - TAB1 chim 100.0 7.1E-39 2.4E-43 351.0 22.0 259 611-898 8-267 (307)
108 3uc3_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 361.4 19.7 261 610-898 19-283 (361)
109 1fot_A TPK1 delta, CAMP-depend 100.0 3.4E-39 1.2E-43 354.3 19.2 251 611-894 6-263 (318)
110 3kk8_A Calcium/calmodulin depe 100.0 1.6E-38 5.5E-43 344.3 24.0 260 609-895 4-267 (284)
111 1xjd_A Protein kinase C, theta 100.0 2.2E-39 7.6E-44 359.3 17.4 251 609-887 15-269 (345)
112 4fr4_A YANK1, serine/threonine 100.0 4.1E-39 1.4E-43 361.4 19.6 251 611-887 15-271 (384)
113 4f0f_A Serine/threonine-protei 100.0 8.4E-39 2.9E-43 347.2 21.4 255 610-892 18-287 (287)
114 3mdy_A Bone morphogenetic prot 100.0 1.8E-38 6.2E-43 353.1 24.7 272 604-896 30-333 (337)
115 1u59_A Tyrosine-protein kinase 100.0 1.9E-38 6.6E-43 344.3 24.2 261 611-898 9-276 (287)
116 4exu_A Mitogen-activated prote 100.0 1E-38 3.5E-43 359.5 22.6 307 609-934 40-369 (371)
117 3brb_A Proto-oncogene tyrosine 100.0 4.4E-39 1.5E-43 354.1 19.2 267 609-896 32-310 (313)
118 2zmd_A Dual specificity protei 100.0 6.9E-39 2.4E-43 362.6 20.9 257 611-895 56-326 (390)
119 3hko_A Calcium/calmodulin-depe 100.0 5E-39 1.7E-43 358.8 19.5 271 606-897 21-338 (345)
120 3cc6_A Protein tyrosine kinase 100.0 1.1E-38 3.8E-43 345.1 21.5 259 610-895 11-274 (281)
121 2h8h_A Proto-oncogene tyrosine 100.0 1.9E-39 6.5E-44 382.2 16.7 260 610-897 266-526 (535)
122 3a8x_A Protein kinase C IOTA t 100.0 1.3E-38 4.6E-43 353.8 22.3 261 611-894 9-280 (345)
123 2wqm_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 349.1 22.6 270 610-899 31-302 (310)
124 4e5w_A Tyrosine-protein kinase 100.0 5.4E-39 1.8E-43 351.4 18.8 271 611-894 21-302 (302)
125 3lxl_A Tyrosine-protein kinase 100.0 4.9E-39 1.7E-43 355.9 18.6 276 611-898 23-307 (327)
126 2x4f_A Myosin light chain kina 100.0 8.3E-39 2.8E-43 359.5 20.7 252 615-894 93-347 (373)
127 2h34_A Serine/threonine-protei 100.0 2E-38 6.9E-43 347.8 23.3 263 610-896 33-298 (309)
128 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.5E-39 2.6E-43 356.3 20.1 251 611-894 41-298 (350)
129 3a62_A Ribosomal protein S6 ki 100.0 1.2E-38 4.2E-43 352.2 21.6 255 610-894 16-281 (327)
130 3qd2_B Eukaryotic translation 100.0 1.2E-38 4.2E-43 353.6 21.6 252 610-887 5-325 (332)
131 3llt_A Serine/threonine kinase 100.0 6.9E-39 2.4E-43 359.9 19.6 270 603-887 27-355 (360)
132 3kex_A Receptor tyrosine-prote 100.0 2.5E-39 8.5E-44 357.8 15.7 258 611-895 13-277 (325)
133 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.4E-39 1.5E-43 355.6 17.6 253 610-895 8-264 (336)
134 2w4o_A Calcium/calmodulin-depe 100.0 1.1E-38 3.8E-43 355.7 21.0 256 608-894 50-310 (349)
135 3is5_A Calcium-dependent prote 100.0 6.5E-39 2.2E-43 347.5 18.4 254 610-887 21-278 (285)
136 1mqb_A Ephrin type-A receptor 100.0 1.6E-38 5.6E-43 352.3 22.0 261 611-897 44-312 (333)
137 2xir_A Vascular endothelial gr 100.0 5.1E-39 1.7E-43 354.1 17.8 275 603-898 19-314 (316)
138 1xbb_A Tyrosine-protein kinase 100.0 1.6E-38 5.5E-43 345.6 21.4 260 610-896 15-281 (291)
139 2ozo_A Tyrosine-protein kinase 100.0 1.5E-38 5.2E-43 379.7 23.2 266 613-905 337-609 (613)
140 1u5q_A Serine/threonine protei 100.0 3.5E-38 1.2E-42 351.0 24.5 249 610-888 53-306 (348)
141 2y94_A 5'-AMP-activated protei 100.0 2.4E-38 8.1E-43 364.9 23.5 254 611-895 16-272 (476)
142 2v62_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 355.7 20.0 267 610-893 36-327 (345)
143 3e7e_A HBUB1, BUB1A, mitotic c 100.0 9.1E-39 3.1E-43 359.4 19.5 256 610-896 64-341 (365)
144 3g33_A Cell division protein k 100.0 2.7E-38 9.3E-43 346.9 22.8 269 609-887 7-296 (308)
145 2i0e_A Protein kinase C-beta I 100.0 9.8E-39 3.3E-43 355.3 19.3 250 610-887 19-276 (353)
146 3ork_A Serine/threonine protei 100.0 1.1E-38 3.6E-43 350.5 19.2 255 610-887 11-273 (311)
147 1p4o_A Insulin-like growth fac 100.0 6.8E-39 2.3E-43 354.1 17.6 267 608-896 22-301 (322)
148 3g2f_A Bone morphogenetic prot 100.0 9.9E-39 3.4E-43 355.0 19.0 274 610-899 12-323 (336)
149 1b6c_B TGF-B superfamily recep 100.0 4.2E-38 1.4E-42 350.9 23.7 273 603-897 34-339 (342)
150 3coi_A Mitogen-activated prote 100.0 2E-38 6.8E-43 355.0 20.8 304 610-932 23-349 (353)
151 3lm5_A Serine/threonine-protei 100.0 1E-38 3.4E-43 353.2 17.9 267 605-896 22-294 (327)
152 3pg1_A Mitogen-activated prote 100.0 3.5E-38 1.2E-42 354.4 22.6 288 602-901 13-328 (362)
153 2eue_A Carbon catabolite derep 100.0 4.6E-38 1.6E-42 339.0 22.4 253 611-895 13-268 (275)
154 2i1m_A Macrophage colony-stimu 100.0 8E-39 2.7E-43 355.3 16.9 266 610-896 45-328 (333)
155 3lzb_A Epidermal growth factor 100.0 1.1E-38 3.8E-43 352.6 17.7 259 610-895 14-279 (327)
156 4fl3_A Tyrosine-protein kinase 100.0 2.3E-38 7.9E-43 379.0 21.6 253 617-896 375-633 (635)
157 3c1x_A Hepatocyte growth facto 100.0 1.1E-38 3.9E-43 358.1 17.8 261 612-898 90-359 (373)
158 1vzo_A Ribosomal protein S6 ki 100.0 2.3E-39 7.7E-44 362.3 12.0 254 610-887 53-321 (355)
159 3mi9_A Cell division protein k 100.0 5.4E-38 1.9E-42 351.2 23.2 274 611-895 17-317 (351)
160 2w5a_A Serine/threonine-protei 100.0 1.4E-38 4.8E-43 343.8 17.8 256 610-888 5-268 (279)
161 3f3z_A Calcium/calmodulin-depe 100.0 7.8E-38 2.7E-42 337.6 23.3 257 609-895 7-267 (277)
162 1fvr_A Tyrosine-protein kinase 100.0 4.3E-38 1.5E-42 348.4 21.7 264 611-898 25-304 (327)
163 4eut_A Serine/threonine-protei 100.0 2.4E-38 8.1E-43 359.6 20.0 278 610-895 8-310 (396)
164 2a2a_A Death-associated protei 100.0 5.6E-38 1.9E-42 346.4 22.4 254 609-887 10-272 (321)
165 3f66_A Hepatocyte growth facto 100.0 4E-38 1.4E-42 343.8 21.0 262 611-898 25-295 (298)
166 4aaa_A Cyclin-dependent kinase 100.0 4.2E-38 1.4E-42 349.0 21.3 271 610-894 24-311 (331)
167 3kn6_A Ribosomal protein S6 ki 100.0 1.6E-38 5.4E-43 350.9 17.7 256 616-896 16-277 (325)
168 1t4h_A Serine/threonine-protei 100.0 5.8E-38 2E-42 341.1 21.9 248 612-887 27-282 (290)
169 2acx_A G protein-coupled recep 100.0 1.9E-38 6.3E-43 370.1 19.1 259 610-894 183-449 (576)
170 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1E-38 3.5E-43 353.4 16.0 275 608-894 31-323 (329)
171 4fvq_A Tyrosine-protein kinase 100.0 2.8E-38 9.5E-43 343.4 19.1 252 610-895 7-276 (289)
172 2yfx_A Tyrosine-protein kinase 100.0 4.5E-38 1.5E-42 348.2 21.0 265 610-896 29-306 (327)
173 3mtl_A Cell division protein k 100.0 1E-38 3.5E-43 352.6 15.6 276 611-898 2-290 (324)
174 2qr7_A Ribosomal protein S6 ki 100.0 2E-38 6.9E-43 351.9 18.0 261 609-898 20-286 (342)
175 3a7i_A MST3 kinase, serine/thr 100.0 8.6E-38 2.9E-42 342.0 22.7 255 610-895 21-276 (303)
176 3fdn_A Serine/threonine-protei 100.0 5.6E-38 1.9E-42 339.2 20.8 256 610-897 8-265 (279)
177 2r5t_A Serine/threonine-protei 100.0 2.6E-38 8.7E-43 354.5 18.6 247 610-884 37-286 (373)
178 3gxj_A TGF-beta receptor type- 100.0 2.8E-40 9.6E-45 361.8 2.3 263 610-896 2-299 (303)
179 3pls_A Macrophage-stimulating 100.0 9E-38 3.1E-42 341.0 22.0 261 612-898 22-291 (298)
180 1nxk_A MAP kinase-activated pr 100.0 1.1E-37 3.7E-42 353.9 23.3 257 610-895 60-327 (400)
181 3bhy_A Death-associated protei 100.0 1.4E-37 4.8E-42 336.8 23.0 253 610-887 4-265 (283)
182 4ejn_A RAC-alpha serine/threon 100.0 1.6E-38 5.5E-43 367.0 16.6 256 610-894 147-409 (446)
183 3mwu_A Calmodulin-domain prote 100.0 7.6E-38 2.6E-42 365.5 22.3 262 609-898 20-285 (486)
184 3cok_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 340.3 18.3 251 610-887 10-262 (278)
185 2ac3_A MAP kinase-interacting 100.0 8.2E-38 2.8E-42 344.4 21.3 272 610-894 11-300 (316)
186 2yex_A Serine/threonine-protei 100.0 8.7E-38 3E-42 337.1 20.9 254 609-887 5-261 (276)
187 1x8b_A WEE1HU, WEE1-like prote 100.0 1.1E-37 3.7E-42 338.5 21.5 249 609-887 9-279 (289)
188 2rku_A Serine/threonine-protei 100.0 2.1E-37 7.2E-42 337.4 23.8 258 610-897 14-273 (294)
189 3eqc_A Dual specificity mitoge 100.0 4.7E-38 1.6E-42 353.0 19.1 272 610-896 32-331 (360)
190 2b9h_A MAP kinase FUS3, mitoge 100.0 2.1E-37 7E-42 346.9 24.2 281 609-902 9-318 (353)
191 3dls_A PAS domain-containing s 100.0 2.8E-38 9.7E-43 350.3 17.0 245 608-887 21-274 (335)
192 2w1i_A JAK2; chromosomal rearr 100.0 2.2E-38 7.5E-43 350.5 16.0 273 610-896 40-324 (326)
193 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.1E-38 2.1E-42 365.3 20.4 261 611-894 185-453 (543)
194 1byg_A CSK, protein (C-termina 100.0 3E-38 1E-42 341.1 16.6 254 610-896 20-275 (278)
195 3fme_A Dual specificity mitoge 100.0 3.6E-38 1.2E-42 342.7 17.3 261 610-895 6-272 (290)
196 2y7j_A Phosphorylase B kinase 100.0 1.9E-37 6.6E-42 347.9 23.5 259 603-887 86-359 (365)
197 2buj_A Serine/threonine-protei 100.0 5.8E-38 2E-42 345.8 18.8 262 610-893 28-305 (317)
198 2r3i_A Cell division protein k 100.0 1.6E-37 5.3E-42 339.3 21.9 273 611-895 3-289 (299)
199 1z57_A Dual specificity protei 100.0 5.5E-37 1.9E-41 341.3 26.3 270 610-895 13-334 (339)
200 2a19_B Interferon-induced, dou 100.0 1.2E-37 4E-42 337.5 20.2 251 608-895 8-275 (284)
201 3byv_A Rhoptry kinase; malaria 100.0 5.7E-39 1.9E-43 362.5 10.2 246 610-887 72-359 (377)
202 3lij_A Calcium/calmodulin depe 100.0 1.1E-37 3.8E-42 364.6 21.4 254 609-888 35-292 (494)
203 3rgf_A Cyclin-dependent kinase 100.0 1.8E-37 6.1E-42 353.8 22.5 278 610-898 19-342 (405)
204 2owb_A Serine/threonine-protei 100.0 2E-37 6.8E-42 344.0 22.3 257 610-896 40-298 (335)
205 3i6u_A CDS1, serine/threonine- 100.0 9.6E-38 3.3E-42 356.8 19.7 255 608-887 132-399 (419)
206 3kvw_A DYRK2, dual specificity 100.0 1.7E-37 5.7E-42 355.7 21.7 269 609-895 95-414 (429)
207 3ll6_A Cyclin G-associated kin 100.0 9E-38 3.1E-42 347.4 18.9 260 610-898 27-312 (337)
208 3q5i_A Protein kinase; CDPK, m 100.0 4.5E-37 1.5E-41 360.5 25.4 262 609-898 34-310 (504)
209 1u46_A ACK-1, activated CDC42 100.0 8.7E-38 3E-42 339.9 18.0 260 610-894 17-284 (291)
210 2vgo_A Serine/threonine-protei 100.0 3.2E-37 1.1E-41 334.1 22.2 255 611-897 14-270 (284)
211 2i6l_A Mitogen-activated prote 100.0 3E-37 1E-41 340.5 22.2 277 610-902 10-318 (320)
212 1j1b_A Glycogen synthase kinas 100.0 3E-37 1E-41 352.8 22.8 272 611-900 54-347 (420)
213 3an0_A Dual specificity mitoge 100.0 8.5E-38 2.9E-42 348.1 17.7 263 610-898 50-319 (340)
214 3v47_A TOLL-like receptor 5B a 100.0 7E-37 2.4E-41 355.2 26.2 364 64-465 2-412 (455)
215 2jam_A Calcium/calmodulin-depe 100.0 2.4E-37 8.3E-42 338.6 20.9 258 609-896 7-268 (304)
216 2h6d_A 5'-AMP-activated protei 100.0 4E-37 1.4E-41 331.9 22.1 255 610-895 10-267 (276)
217 4e7w_A Glycogen synthase kinas 100.0 2.8E-37 9.5E-42 350.2 21.7 273 610-899 39-331 (394)
218 3com_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41 338.5 22.5 258 608-895 26-284 (314)
219 1ua2_A CAK, cell division prot 100.0 3.4E-37 1.2E-41 343.7 21.9 276 608-896 7-298 (346)
220 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.7E-38 5.9E-43 350.3 11.3 265 610-901 32-309 (319)
221 3nyv_A Calmodulin-domain prote 100.0 8.8E-38 3E-42 365.1 17.9 262 609-898 24-290 (484)
222 2wtk_C Serine/threonine-protei 100.0 6E-37 2.1E-41 335.7 23.0 263 609-899 3-273 (305)
223 3eb0_A Putative uncharacterize 100.0 2.8E-37 9.5E-42 349.4 20.9 271 608-896 4-328 (383)
224 2j7t_A Serine/threonine-protei 100.0 1E-37 3.5E-42 341.2 16.4 253 609-887 17-275 (302)
225 3e3p_A Protein kinase, putativ 100.0 5E-37 1.7E-41 344.8 22.2 283 605-901 17-326 (360)
226 1blx_A Cyclin-dependent kinase 100.0 3.5E-37 1.2E-41 341.0 20.6 275 609-896 9-303 (326)
227 2j0j_A Focal adhesion kinase 1 100.0 3.8E-37 1.3E-41 369.8 22.0 259 610-895 389-652 (656)
228 3q60_A ROP5B; pseudokinase, tr 100.0 9.5E-38 3.2E-42 351.8 15.5 255 611-887 62-352 (371)
229 2wei_A Calmodulin-domain prote 100.0 4.5E-37 1.5E-41 333.5 20.3 265 606-898 17-285 (287)
230 3nsz_A CK II alpha, casein kin 100.0 7.9E-37 2.7E-41 338.8 22.6 261 611-894 36-324 (330)
231 3pfq_A PKC-B, PKC-beta, protei 100.0 2.8E-37 9.7E-42 372.1 20.1 255 610-894 340-602 (674)
232 3cek_A Dual specificity protei 100.0 4.1E-37 1.4E-41 338.3 19.6 258 610-895 27-298 (313)
233 2clq_A Mitogen-activated prote 100.0 9.3E-37 3.2E-41 332.4 22.2 257 612-894 23-283 (295)
234 1wak_A Serine/threonine-protei 100.0 2.1E-37 7.2E-42 352.8 17.8 264 610-887 36-391 (397)
235 2vx3_A Dual specificity tyrosi 100.0 2E-36 6.7E-41 342.3 25.2 271 609-895 52-378 (382)
236 2vwi_A Serine/threonine-protei 100.0 5.1E-38 1.7E-42 343.8 11.7 265 610-887 14-287 (303)
237 1phk_A Phosphorylase kinase; g 100.0 1.5E-36 5.2E-41 331.3 22.2 261 608-895 14-289 (298)
238 2x7f_A TRAF2 and NCK-interacti 100.0 1.5E-36 5.2E-41 335.9 22.4 258 608-894 21-291 (326)
239 2ycf_A Serine/threonine-protei 100.0 5.6E-37 1.9E-41 338.6 18.9 255 608-887 7-274 (322)
240 2eu9_A Dual specificity protei 100.0 3.6E-36 1.2E-40 337.0 25.3 270 610-895 18-339 (355)
241 1zy4_A Serine/threonine-protei 100.0 2E-36 6.8E-41 331.1 20.5 252 609-887 4-283 (303)
242 2pml_X PFPK7, Ser/Thr protein 100.0 5.6E-37 1.9E-41 342.7 16.5 267 610-887 30-322 (348)
243 2rio_A Serine/threonine-protei 100.0 1.3E-36 4.5E-41 349.0 19.8 254 611-887 15-295 (434)
244 3aln_A Dual specificity mitoge 100.0 7.6E-37 2.6E-41 338.4 17.1 262 610-895 21-291 (327)
245 1q8y_A SR protein kinase; tran 100.0 5.3E-36 1.8E-40 338.2 24.1 270 611-896 19-340 (373)
246 2dyl_A Dual specificity mitoge 100.0 8.4E-37 2.9E-41 336.6 16.9 262 610-898 24-292 (318)
247 3fhr_A MAP kinase-activated pr 100.0 2.2E-36 7.4E-41 335.5 19.1 261 609-897 26-295 (336)
248 3j0a_A TOLL-like receptor 5; m 100.0 2.8E-35 9.7E-40 366.8 28.3 389 72-466 17-565 (844)
249 3p23_A Serine/threonine-protei 100.0 5.5E-36 1.9E-40 342.7 19.2 248 611-887 24-283 (432)
250 3a99_A Proto-oncogene serine/t 100.0 4.6E-36 1.6E-40 330.8 15.9 247 605-887 37-293 (320)
251 2id5_A Lingo-1, leucine rich r 100.0 4.8E-35 1.7E-39 341.7 24.0 297 81-464 34-336 (477)
252 2iwi_A Serine/threonine-protei 100.0 1.2E-35 3.9E-40 326.6 16.6 245 607-887 27-283 (312)
253 3qa8_A MGC80376 protein; kinas 100.0 6.4E-36 2.2E-40 351.7 15.2 272 610-894 13-309 (676)
254 3vq2_A TLR4, TOLL-like recepto 100.0 1.5E-34 5.2E-39 348.2 25.2 367 79-465 32-562 (606)
255 2pzi_A Probable serine/threoni 100.0 1.2E-34 4.3E-39 351.8 19.1 242 610-894 79-328 (681)
256 2z81_A CD282 antigen, TOLL-lik 100.0 1.3E-33 4.6E-38 335.8 26.6 356 80-464 27-513 (549)
257 3uqc_A Probable conserved tran 100.0 1.5E-34 5.3E-39 312.5 16.7 235 610-895 30-266 (286)
258 3t6q_A CD180 antigen; protein- 100.0 4.6E-33 1.6E-37 335.3 30.8 372 71-461 14-462 (606)
259 3m2w_A MAP kinase-activated pr 100.0 1.5E-33 5.2E-38 307.5 21.7 235 610-897 16-264 (299)
260 3dzo_A Rhoptry kinase domain; 100.0 2.8E-34 9.7E-39 327.4 15.1 245 611-887 78-363 (413)
261 4g8a_A TOLL-like receptor 4; l 100.0 8.3E-33 2.8E-37 335.1 28.5 366 80-464 53-583 (635)
262 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.7E-33 3.3E-37 328.8 28.5 341 79-464 52-513 (562)
263 3t6q_A CD180 antigen; protein- 100.0 6.9E-33 2.3E-37 333.8 26.3 296 127-464 255-563 (606)
264 2z63_A TOLL-like receptor 4, v 100.0 1.2E-32 4.1E-37 329.3 27.5 366 80-464 29-534 (570)
265 2z7x_B TOLL-like receptor 1, v 100.0 1.2E-32 3.9E-37 325.3 24.6 359 79-464 21-484 (520)
266 2vuw_A Serine/threonine-protei 100.0 2.4E-34 8.1E-39 319.5 8.6 244 610-887 19-331 (336)
267 1ogq_A PGIP-2, polygalacturona 100.0 6.2E-33 2.1E-37 304.2 16.3 250 128-465 52-308 (313)
268 3oja_B Anopheles plasmodium-re 100.0 4.6E-32 1.6E-36 324.8 24.8 307 79-464 51-361 (597)
269 1ziw_A TOLL-like receptor 3; i 100.0 1.6E-31 5.5E-36 326.3 29.8 377 79-460 25-492 (680)
270 3o6n_A APL1; leucine-rich repe 100.0 4.6E-32 1.6E-36 307.7 22.7 307 79-464 45-355 (390)
271 4eco_A Uncharacterized protein 100.0 3.8E-32 1.3E-36 327.4 20.5 336 78-442 205-601 (636)
272 3v47_A TOLL-like receptor 5B a 100.0 5.9E-32 2E-36 313.7 21.4 308 78-447 53-414 (455)
273 1ziw_A TOLL-like receptor 3; i 100.0 8.9E-31 3E-35 319.8 30.1 370 79-465 222-626 (680)
274 4ecn_A Leucine-rich repeat pro 100.0 1.5E-31 5E-36 327.2 22.6 318 77-462 489-841 (876)
275 2id5_A Lingo-1, leucine rich r 100.0 2.2E-31 7.4E-36 310.8 22.3 301 79-466 56-361 (477)
276 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.1E-31 2.8E-35 312.2 27.4 314 78-445 75-514 (562)
277 4fcg_A Uncharacterized protein 100.0 6.9E-32 2.3E-36 297.7 16.7 274 35-441 23-314 (328)
278 2z7x_B TOLL-like receptor 1, v 100.0 5.1E-31 1.7E-35 311.3 23.1 316 77-445 43-485 (520)
279 3vq2_A TLR4, TOLL-like recepto 100.0 2.3E-30 8E-35 311.7 27.6 356 83-461 15-534 (606)
280 2ft3_A Biglycan; proteoglycan, 100.0 3.4E-30 1.2E-34 285.4 25.4 285 81-439 35-331 (332)
281 2z63_A TOLL-like receptor 4, v 100.0 1.2E-30 4E-35 312.0 22.2 350 79-447 52-537 (570)
282 1xku_A Decorin; proteoglycan, 100.0 8.7E-30 3E-34 281.9 27.1 292 63-458 22-329 (330)
283 3oja_B Anopheles plasmodium-re 100.0 2.2E-30 7.6E-35 310.2 21.6 306 79-465 75-384 (597)
284 4fmz_A Internalin; leucine ric 100.0 1.9E-29 6.4E-34 281.5 26.8 298 79-460 44-345 (347)
285 3o6n_A APL1; leucine-rich repe 100.0 7E-30 2.4E-34 289.7 23.5 305 79-464 69-377 (390)
286 3j0a_A TOLL-like receptor 5; m 100.0 2.3E-29 8E-34 313.5 27.8 343 83-461 8-375 (844)
287 1o6v_A Internalin A; bacterial 100.0 3.3E-29 1.1E-33 291.0 25.4 315 79-462 68-389 (466)
288 2z81_A CD282 antigen, TOLL-lik 100.0 2.5E-29 8.4E-34 299.0 22.4 204 65-290 3-211 (549)
289 2z66_A Variable lymphocyte rec 100.0 2.2E-29 7.5E-34 275.6 20.1 247 83-443 11-263 (306)
290 3zyj_A Leucine-rich repeat-con 100.0 5.3E-29 1.8E-33 287.0 23.7 258 64-441 33-292 (440)
291 2z80_A TOLL-like receptor 2, v 100.0 5.8E-30 2E-34 286.1 14.3 287 59-446 23-319 (353)
292 3bz5_A Internalin-J, INLJ; leu 100.0 3.4E-28 1.1E-32 280.3 28.8 314 78-459 41-366 (457)
293 4fmz_A Internalin; leucine ric 100.0 3.1E-28 1.1E-32 271.6 25.3 280 78-441 65-346 (347)
294 2ft3_A Biglycan; proteoglycan, 100.0 4.7E-28 1.6E-32 268.2 24.1 265 103-463 33-309 (332)
295 1o6v_A Internalin A; bacterial 100.0 1.1E-27 3.9E-32 278.0 28.3 317 79-461 46-366 (466)
296 3bz5_A Internalin-J, INLJ; leu 100.0 9.6E-28 3.3E-32 276.5 27.3 280 77-418 62-353 (457)
297 1xku_A Decorin; proteoglycan, 100.0 1.1E-27 3.7E-32 265.1 26.0 266 103-463 31-308 (330)
298 3zyi_A Leucine-rich repeat-con 100.0 5.1E-28 1.7E-32 279.8 23.5 260 64-442 44-304 (452)
299 1ozn_A Reticulon 4 receptor; N 100.0 4.5E-28 1.5E-32 262.2 18.6 209 72-312 4-215 (285)
300 1jl5_A Outer protein YOPM; leu 100.0 5.5E-27 1.9E-31 269.9 28.1 218 79-330 91-310 (454)
301 4g8a_A TOLL-like receptor 4; l 100.0 1.5E-27 5E-32 289.0 23.9 346 79-443 76-582 (635)
302 1jl5_A Outer protein YOPM; leu 100.0 1.9E-27 6.5E-32 273.7 22.7 327 79-462 11-371 (454)
303 3g06_A SSPH2 (leucine-rich rep 99.9 2.6E-27 8.8E-32 280.7 20.7 285 57-446 13-302 (622)
304 4fcg_A Uncharacterized protein 99.9 8.7E-27 3E-31 256.8 20.9 65 78-143 103-167 (328)
305 1wwl_A Monocyte differentiatio 99.9 1E-28 3.5E-33 270.7 5.1 249 99-443 39-311 (312)
306 3zyj_A Leucine-rich repeat-con 99.9 2.9E-26 9.8E-31 264.2 25.1 247 104-465 44-296 (440)
307 1ozn_A Reticulon 4 receptor; N 99.9 1E-26 3.4E-31 251.6 19.4 219 65-312 1-239 (285)
308 2z66_A Variable lymphocyte rec 99.9 6.3E-27 2.1E-31 256.0 17.8 247 106-464 10-264 (306)
309 4azs_A Methyltransferase WBDD; 99.9 4.5E-28 1.5E-32 285.5 8.8 185 618-815 241-435 (569)
310 3zyi_A Leucine-rich repeat-con 99.9 3E-26 1E-30 265.0 23.8 247 104-465 55-307 (452)
311 2z80_A TOLL-like receptor 2, v 99.9 1.3E-26 4.4E-31 259.0 16.8 258 79-421 52-318 (353)
312 3o53_A Protein LRIM1, AGAP0063 99.9 6.5E-28 2.2E-32 265.0 4.7 195 77-311 8-204 (317)
313 1wwl_A Monocyte differentiatio 99.9 1.8E-27 6.1E-32 260.9 5.0 251 73-418 37-310 (312)
314 3oja_A Leucine-rich immune mol 99.9 1.2E-26 4.1E-31 269.8 8.8 237 103-464 34-285 (487)
315 2o6q_A Variable lymphocyte rec 99.9 8.3E-25 2.8E-29 234.3 21.6 216 63-313 2-220 (270)
316 3o53_A Protein LRIM1, AGAP0063 99.9 8.4E-26 2.9E-30 248.1 9.8 254 104-458 11-272 (317)
317 3oja_A Leucine-rich immune mol 99.9 1.2E-25 4.2E-30 261.2 11.2 219 124-465 32-254 (487)
318 3en9_A Glycoprotease, O-sialog 99.9 9.1E-26 3.1E-30 264.4 9.3 186 614-818 339-538 (540)
319 2z62_A TOLL-like receptor 4, v 99.9 2.8E-24 9.6E-29 231.1 19.0 158 85-298 13-172 (276)
320 2z62_A TOLL-like receptor 4, v 99.9 6.1E-24 2.1E-28 228.5 21.3 230 107-447 11-243 (276)
321 3g06_A SSPH2 (leucine-rich rep 99.9 5.1E-23 1.8E-27 243.9 29.0 255 103-462 40-298 (622)
322 1z7x_W Ribonuclease inhibitor; 99.9 7.7E-27 2.6E-31 271.1 -9.1 347 79-460 28-439 (461)
323 2o6q_A Variable lymphocyte rec 99.9 9.3E-23 3.2E-27 218.3 23.2 204 104-443 17-220 (270)
324 1z7x_W Ribonuclease inhibitor; 99.9 1.2E-26 4E-31 269.6 -8.1 348 80-461 4-411 (461)
325 3rfs_A Internalin B, repeat mo 99.9 4.6E-24 1.6E-28 228.7 12.1 223 104-448 20-242 (272)
326 3rfs_A Internalin B, repeat mo 99.9 1.6E-23 5.6E-28 224.4 16.2 180 99-310 37-217 (272)
327 3m19_A Variable lymphocyte rec 99.9 2E-23 6.7E-28 221.0 16.1 187 71-290 7-194 (251)
328 1p9a_G Platelet glycoprotein I 99.9 9E-23 3.1E-27 220.4 20.9 203 99-441 6-208 (290)
329 1p9a_G Platelet glycoprotein I 99.9 1.8E-22 6.1E-27 218.1 18.9 199 79-312 10-209 (290)
330 2xwt_C Thyrotropin receptor; s 99.9 1.3E-22 4.4E-27 213.1 16.4 202 94-438 25-236 (239)
331 2ast_B S-phase kinase-associat 99.9 3.5E-24 1.2E-28 237.6 3.9 184 71-286 39-233 (336)
332 3goz_A Leucine-rich repeat-con 99.9 2.7E-24 9.2E-29 240.8 2.9 81 84-164 3-94 (362)
333 2xwt_C Thyrotropin receptor; s 99.9 1.3E-22 4.5E-27 213.0 14.9 197 79-309 31-237 (239)
334 4glp_A Monocyte differentiatio 99.9 1E-22 3.4E-27 222.9 13.9 228 126-442 64-308 (310)
335 1h6u_A Internalin H; cell adhe 99.9 1.1E-21 3.8E-26 214.0 17.4 61 100-163 38-98 (308)
336 4ay9_X Follicle-stimulating ho 99.9 9.1E-22 3.1E-26 219.1 16.5 240 84-440 14-258 (350)
337 1zar_A RIO2 kinase; serine kin 99.9 3E-22 1E-26 214.8 10.6 153 606-792 85-253 (282)
338 2ca6_A RAN GTPase-activating p 99.9 3.6E-24 1.2E-28 242.2 -5.3 249 94-445 23-320 (386)
339 4glp_A Monocyte differentiatio 99.9 6E-22 2E-26 216.7 12.3 205 80-312 92-308 (310)
340 3m19_A Variable lymphocyte rec 99.9 9.4E-21 3.2E-25 200.3 19.9 181 103-314 14-195 (251)
341 1h6u_A Internalin H; cell adhe 99.9 3.7E-21 1.3E-25 209.8 16.0 212 106-444 22-233 (308)
342 2o6s_A Variable lymphocyte rec 99.8 5.4E-21 1.8E-25 196.0 15.1 179 71-298 9-188 (208)
343 3goz_A Leucine-rich repeat-con 99.8 1E-22 3.4E-27 228.0 1.4 265 107-445 2-301 (362)
344 2ca6_A RAN GTPase-activating p 99.8 2.2E-23 7.6E-28 235.7 -4.1 255 78-421 31-320 (386)
345 3cvr_A Invasion plasmid antige 99.8 4.3E-21 1.5E-25 224.5 12.8 205 56-316 33-248 (571)
346 3cvr_A Invasion plasmid antige 99.8 1.3E-20 4.6E-25 220.3 15.0 196 104-429 60-255 (571)
347 4ay9_X Follicle-stimulating ho 99.8 3E-20 1E-24 206.8 14.2 241 106-463 12-260 (350)
348 4b8c_D Glucose-repressible alc 99.8 2.3E-21 8E-26 235.5 5.4 225 37-316 130-359 (727)
349 2o6s_A Variable lymphocyte rec 99.8 5.7E-20 1.9E-24 188.4 14.7 177 106-319 10-186 (208)
350 2xot_A Amphoterin-induced prot 99.8 9.2E-20 3.2E-24 203.7 13.5 188 62-312 8-203 (361)
351 2ast_B S-phase kinase-associat 99.8 5.2E-21 1.8E-25 212.0 2.4 253 104-449 48-314 (336)
352 2v70_A SLIT-2, SLIT homolog 2 99.8 7.7E-19 2.6E-23 181.3 16.3 164 64-290 3-168 (220)
353 3e6j_A Variable lymphocyte rec 99.8 1.1E-18 3.7E-23 181.5 16.3 165 57-291 10-175 (229)
354 1m9s_A Internalin B; cell inva 99.8 1.7E-18 5.9E-23 204.9 19.4 184 85-312 27-211 (605)
355 2v9t_B SLIT homolog 2 protein 99.8 1.5E-18 5.1E-23 179.2 16.2 162 64-288 3-165 (220)
356 1h6t_A Internalin B; cell adhe 99.8 1.5E-18 5.1E-23 187.4 14.5 171 100-312 43-214 (291)
357 3ogk_B Coronatine-insensitive 99.8 9.4E-21 3.2E-25 227.2 -4.1 334 79-443 164-528 (592)
358 3ogk_B Coronatine-insensitive 99.8 2.5E-21 8.7E-26 232.1 -9.9 364 79-460 112-525 (592)
359 1h6t_A Internalin B; cell adhe 99.8 3.6E-18 1.2E-22 184.4 15.5 176 79-296 46-221 (291)
360 1m9s_A Internalin B; cell inva 99.8 1.2E-18 4.3E-23 206.1 12.8 168 102-311 20-188 (605)
361 2v9t_B SLIT homolog 2 protein 99.8 4.6E-18 1.6E-22 175.5 14.8 142 71-216 13-166 (220)
362 2xot_A Amphoterin-induced prot 99.8 3.3E-18 1.1E-22 191.0 14.6 169 106-329 21-201 (361)
363 1zth_A RIO1 serine protein kin 99.8 1.6E-18 5.4E-23 183.6 10.9 138 613-767 49-219 (258)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 6.4E-18 2.2E-22 174.4 15.0 68 378-445 103-170 (220)
365 1dce_A Protein (RAB geranylger 99.7 1.4E-20 4.7E-25 221.6 -8.1 120 253-435 443-567 (567)
366 4ezg_A Putative uncharacterize 99.7 1.3E-17 4.6E-22 169.0 12.4 154 100-289 41-195 (197)
367 3e6j_A Variable lymphocyte rec 99.7 6.6E-17 2.3E-21 167.9 17.7 154 106-315 22-176 (229)
368 2p1m_B Transport inhibitor res 99.7 9.5E-20 3.2E-24 218.5 -5.1 362 79-460 105-518 (594)
369 1xeu_A Internalin C; cellular 99.7 6.9E-18 2.4E-22 179.2 9.8 169 81-292 21-189 (263)
370 1dce_A Protein (RAB geranylger 99.7 2.6E-19 9E-24 210.7 -6.1 127 252-447 424-552 (567)
371 1xeu_A Internalin C; cellular 99.7 1.9E-17 6.3E-22 175.9 8.2 170 101-313 17-187 (263)
372 4ezg_A Putative uncharacterize 99.7 8.6E-17 2.9E-21 163.0 10.9 155 121-312 39-195 (197)
373 4b8c_D Glucose-repressible alc 99.7 1.1E-17 3.9E-22 203.1 3.8 116 171-315 217-333 (727)
374 2p1m_B Transport inhibitor res 99.7 8.4E-19 2.9E-23 210.3 -6.2 325 79-441 130-519 (594)
375 1w8a_A SLIT protein; signaling 99.7 2.8E-16 9.6E-21 158.3 12.9 140 66-219 2-143 (192)
376 1w8a_A SLIT protein; signaling 99.6 3.9E-16 1.3E-20 157.3 10.2 131 106-291 11-142 (192)
377 4gyi_A RIO2 kinase; protein ki 99.6 5.8E-16 2E-20 169.6 10.1 138 613-766 97-264 (397)
378 2wfh_A SLIT homolog 2 protein 99.6 2.2E-15 7.7E-20 151.7 13.1 139 64-216 2-140 (193)
379 2o6r_A Variable lymphocyte rec 99.6 5.9E-15 2E-19 146.6 13.5 131 82-219 10-141 (177)
380 2ell_A Acidic leucine-rich nuc 99.6 2.4E-15 8.2E-20 148.0 10.5 137 79-220 24-164 (168)
381 3sb4_A Hypothetical leucine ri 99.6 5.4E-16 1.9E-20 170.8 5.2 125 251-435 202-328 (329)
382 2ell_A Acidic leucine-rich nuc 99.6 5.6E-15 1.9E-19 145.4 12.0 134 102-290 23-162 (168)
383 2wfh_A SLIT homolog 2 protein 99.6 9.2E-15 3.1E-19 147.2 13.3 71 193-288 69-139 (193)
384 2o6r_A Variable lymphocyte rec 99.6 2.3E-14 7.7E-19 142.4 14.8 133 105-292 9-141 (177)
385 2je0_A Acidic leucine-rich nuc 99.6 6.8E-15 2.3E-19 141.6 9.3 129 79-211 17-149 (149)
386 2je0_A Acidic leucine-rich nuc 99.5 1.1E-14 3.8E-19 140.1 9.6 128 102-284 16-149 (149)
387 3sb4_A Hypothetical leucine ri 99.5 7.6E-15 2.6E-19 161.6 8.2 260 80-411 26-328 (329)
388 4fdw_A Leucine rich hypothetic 99.5 3.8E-13 1.3E-17 151.2 19.4 59 379-440 299-357 (401)
389 1ds9_A Outer arm dynein; leuci 99.5 3.7E-16 1.3E-20 158.4 -6.3 154 99-288 14-185 (198)
390 1a9n_A U2A', U2A'; complex (nu 99.5 4.3E-14 1.5E-18 140.2 8.6 134 99-288 15-153 (176)
391 2r9u_A Variable lymphocyte rec 99.5 2.1E-13 7.2E-18 134.6 12.3 116 63-216 3-119 (174)
392 1a9n_A U2A', U2A'; complex (nu 99.5 6.5E-14 2.2E-18 138.9 8.6 128 79-215 19-153 (176)
393 3g39_A Variable lymphocyte rec 99.4 5.4E-13 1.8E-17 131.2 12.1 112 73-218 6-118 (170)
394 1ds9_A Outer arm dynein; leuci 99.4 3E-15 1E-19 151.7 -4.7 60 380-441 115-185 (198)
395 3g39_A Variable lymphocyte rec 99.4 2.4E-12 8.3E-17 126.5 12.1 88 179-291 31-118 (170)
396 4fdw_A Leucine rich hypothetic 99.4 1.3E-11 4.5E-16 138.6 18.9 261 81-441 115-383 (401)
397 2r9u_A Variable lymphocyte rec 99.3 4.8E-12 1.6E-16 124.8 12.2 89 178-291 33-121 (174)
398 3un9_A NLR family member X1; l 99.3 2.6E-14 8.8E-19 159.2 -9.5 188 103-311 72-283 (372)
399 3un9_A NLR family member X1; l 99.2 8.4E-14 2.9E-18 155.0 -8.2 189 79-288 72-283 (372)
400 2ifg_A High affinity nerve gro 99.2 2.9E-11 1E-15 133.9 10.0 79 84-164 13-94 (347)
401 3tm0_A Aminoglycoside 3'-phosp 99.2 9.6E-11 3.3E-15 124.2 12.0 146 607-765 10-212 (263)
402 2ifg_A High affinity nerve gro 99.1 1.2E-10 4.1E-15 128.9 10.6 104 107-216 12-117 (347)
403 4fs7_A Uncharacterized protein 99.1 3.1E-09 1.1E-13 119.7 19.7 291 97-438 65-376 (394)
404 1nd4_A Aminoglycoside 3'-phosp 99.1 1.4E-10 4.7E-15 122.8 8.0 137 611-765 20-213 (264)
405 4fs7_A Uncharacterized protein 98.9 1.4E-08 4.7E-13 114.4 17.5 273 115-441 59-355 (394)
406 3dxp_A Putative acyl-COA dehyd 98.9 7.6E-09 2.6E-13 114.9 12.1 143 615-766 42-248 (359)
407 4gt6_A Cell surface protein; l 98.9 7.7E-08 2.6E-12 108.2 20.3 60 378-439 309-368 (394)
408 2ra8_A Uncharacterized protein 98.8 4.1E-10 1.4E-14 124.1 1.2 202 79-309 107-341 (362)
409 3sg8_A APH(2'')-ID; antibiotic 98.8 3.8E-09 1.3E-13 114.4 6.7 186 616-818 25-287 (304)
410 4gt6_A Cell surface protein; l 98.7 2.1E-07 7.3E-12 104.6 19.1 60 376-439 330-389 (394)
411 2ra8_A Uncharacterized protein 98.7 4.2E-09 1.4E-13 116.0 3.2 183 79-286 139-341 (362)
412 4h09_A Hypothetical leucine ri 98.6 1.2E-06 4.1E-11 97.9 20.4 282 80-438 47-343 (379)
413 3r70_A Aminoglycoside phosphot 98.5 5.4E-07 1.8E-11 98.1 13.7 137 612-767 38-238 (320)
414 3rw6_A Nuclear RNA export fact 98.5 2.9E-09 1E-13 111.1 -4.3 158 71-281 80-257 (267)
415 1io0_A Tropomodulin; LRR prote 98.4 1.3E-08 4.4E-13 101.1 -2.0 40 249-288 119-164 (185)
416 1io0_A Tropomodulin; LRR prote 98.4 1.2E-08 4.1E-13 101.4 -3.0 72 93-164 26-107 (185)
417 3d1u_A Putative fructosamine-3 98.3 1.5E-06 5E-11 92.7 9.7 79 612-696 16-97 (288)
418 3tdw_A Gentamicin resistance p 98.3 7.9E-06 2.7E-10 88.1 14.6 136 616-766 24-224 (306)
419 3rw6_A Nuclear RNA export fact 98.2 3.3E-07 1.1E-11 95.5 1.5 53 380-434 196-257 (267)
420 3ovc_A Hygromycin-B 4-O-kinase 98.2 1.1E-05 3.7E-10 89.1 13.0 78 612-697 42-122 (362)
421 4h09_A Hypothetical leucine ri 98.1 0.0001 3.5E-09 82.0 20.3 267 98-438 41-320 (379)
422 4gkh_A Aminoglycoside 3'-phosp 98.1 1.9E-05 6.6E-10 83.4 13.0 134 618-765 31-222 (272)
423 3ats_A Putative uncharacterize 97.9 1.3E-05 4.6E-10 88.5 6.8 83 616-698 25-122 (357)
424 2q83_A YTAA protein; 2635576, 97.7 0.00028 9.5E-09 77.2 14.7 142 617-765 38-251 (346)
425 2olc_A MTR kinase, methylthior 97.6 0.00017 5.8E-09 80.8 10.7 77 616-694 35-120 (397)
426 2pyw_A Uncharacterized protein 97.5 0.0002 6.7E-09 80.9 9.5 77 735-814 231-312 (420)
427 3jr1_A Putative fructosamine-3 97.5 0.00056 1.9E-08 73.3 12.1 141 615-762 40-232 (312)
428 3f7w_A Putative fructosamine-3 97.5 0.00031 1E-08 74.8 9.9 80 611-696 15-97 (288)
429 1pgv_A TMD-1, tropomodulin TMD 97.5 1.1E-05 3.9E-10 79.3 -1.3 19 197-215 93-111 (197)
430 1pgv_A TMD-1, tropomodulin TMD 97.4 2.1E-05 7.2E-10 77.3 -0.5 121 95-215 33-170 (197)
431 3e4g_A ATP synthase subunit S, 97.2 7.8E-05 2.7E-09 71.8 1.8 35 252-286 115-150 (176)
432 3e4g_A ATP synthase subunit S, 97.2 0.00014 4.9E-09 70.0 3.4 35 179-213 115-150 (176)
433 3rfe_A Platelet glycoprotein I 97.1 0.00063 2.2E-08 62.5 6.7 38 126-163 31-68 (130)
434 2ppq_A HSK, HK, homoserine kin 97.1 0.0023 7.7E-08 69.2 12.3 160 601-765 7-216 (322)
435 3dxq_A Choline/ethanolamine ki 96.9 0.0019 6.6E-08 69.0 8.5 72 615-696 22-95 (301)
436 3csv_A Aminoglycoside phosphot 96.8 0.0032 1.1E-07 68.4 9.8 144 617-767 24-218 (333)
437 3rfe_A Platelet glycoprotein I 96.8 0.0026 9E-08 58.2 7.3 66 65-139 1-68 (130)
438 1zyl_A Hypothetical protein YI 96.7 0.016 5.6E-07 62.5 14.6 144 617-766 32-223 (328)
439 3feg_A Choline/ethanolamine ki 96.4 0.0087 3E-07 65.8 9.9 142 617-765 56-253 (379)
440 1nw1_A Choline kinase (49.2 KD 96.4 0.0065 2.2E-07 68.3 8.6 73 616-696 78-159 (429)
441 3c5i_A Choline kinase; choline 96.0 0.0082 2.8E-07 66.2 7.1 74 616-696 38-121 (369)
442 3i1a_A Spectinomycin phosphotr 96.0 0.03 1E-06 60.8 11.3 67 621-696 33-108 (339)
443 2qg7_A Ethanolamine kinase PV0 95.9 0.03 1E-06 63.3 10.9 74 616-696 113-188 (458)
444 2yle_A Protein spire homolog 1 95.4 0.075 2.6E-06 52.3 10.2 102 694-816 33-134 (229)
445 3f2s_A CK, chetk-alpha, cholin 95.1 0.04 1.4E-06 60.8 8.4 145 617-765 58-279 (401)
446 3mes_A Choline kinase; malaria 93.4 0.088 3E-06 58.6 6.4 142 616-765 75-290 (424)
447 2l2t_A Receptor tyrosine-prote 87.2 0.4 1.4E-05 33.6 2.7 10 527-536 29-38 (44)
448 2jwa_A Receptor tyrosine-prote 85.6 0.53 1.8E-05 32.9 2.6 13 524-536 27-39 (44)
449 3cxl_A N-chimerin; SH2, RHO-GA 85.4 0.11 3.9E-06 58.6 -1.3 63 615-680 146-215 (463)
450 3g15_A CK, chetk-alpha, cholin 83.9 3.2 0.00011 45.7 9.7 28 738-765 246-279 (401)
451 4ano_A ESSB; membrane protein, 77.8 4.3 0.00015 40.0 7.0 114 667-819 48-163 (219)
452 4ann_A ESSB; membrane protein, 73.7 4.7 0.00016 39.6 6.0 116 667-819 43-158 (215)
453 2k9y_A Ephrin type-A receptor 66.7 3.4 0.00012 28.5 2.4 13 512-524 15-27 (41)
454 2klu_A T-cell surface glycopro 56.2 10 0.00034 28.8 3.3 21 512-532 12-32 (70)
455 2lz0_A Uncharacterized protein 44.4 22 0.00075 30.1 4.3 39 121-160 15-53 (100)
456 2lz0_A Uncharacterized protein 31.3 91 0.0031 26.2 6.1 26 135-160 5-30 (100)
457 1cja_A Protein (actin-fragmin 31.3 1.1E+02 0.0037 32.1 7.7 139 615-767 73-238 (342)
458 2ks1_B Epidermal growth factor 27.5 51 0.0017 23.1 3.0 21 521-541 21-41 (44)
459 2l2t_A Receptor tyrosine-prote 26.4 65 0.0022 22.5 3.4 26 516-541 15-40 (44)
460 3ls8_A Phosphatidylinositol 3- 21.5 7.2E+02 0.025 28.3 12.8 85 673-765 403-501 (614)
461 2l8s_A Integrin alpha-1; trans 21.4 26 0.0009 25.6 0.6 7 516-522 16-22 (54)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.9e-52 Score=448.02 Aligned_cols=262 Identities=31% Similarity=0.470 Sum_probs=214.9
Q ss_pred cCCcccCcccccCceEEEEEEEc------CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceE
Q 002149 611 KNFASENELGRGGFGVVYKGELD------DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYER 684 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 684 (959)
++|...+.||+|+||.||+|++. +++.||||+++.. +....++|.+|+++|++++|||||+++|+|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 56788899999999999999764 4788999999754 566678899999999999999999999999999999
Q ss_pred EEEEEecCCCchhhHHhhcc--------cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcE
Q 002149 685 LLVYEYMPQGALSKHIFHWK--------SLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRA 756 (959)
Q Consensus 685 ~lv~e~~~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ 756 (959)
++|||||++|+|.++++... ......++|.+++.|+.|||+||+|||+ ++||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcE
Confidence 99999999999999997532 1233579999999999999999999999 899999999999999999999
Q ss_pred EEeeccccccCCCCCcc-eeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHH
Q 002149 757 KVSDFGLVKLAPDSERS-VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFW 834 (959)
Q Consensus 757 ki~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~ 834 (959)
||+|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||.+....+.... +.
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~---i~ 244 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC---IT 244 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH---HH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---HH
Confidence 99999999865443322 2233579999999999999999999999999999999999 8999988765442111 11
Q ss_pred hhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 835 NIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
. . ..+..+. ..+..+.+|+.+||+.||++|||+++|++.|+.+.+.
T Consensus 245 ~---------~---~~~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 245 Q---------G---RVLQRPR---TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp H---------T---CCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c---------C---CCCCCCc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 0 0 0111111 2234688999999999999999999999999887654
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.6e-51 Score=450.36 Aligned_cols=262 Identities=31% Similarity=0.468 Sum_probs=209.8
Q ss_pred cCCcccCcccccCceEEEEEEEc------CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceE
Q 002149 611 KNFASENELGRGGFGVVYKGELD------DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYER 684 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 684 (959)
++|...++||+|+||.||+|+++ +++.||||+++.. +....++|.+|+++|++++|||||+++|+|.+....
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 45677889999999999999864 4788999999754 566678899999999999999999999999999999
Q ss_pred EEEEEecCCCchhhHHhhccc----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC
Q 002149 685 LLVYEYMPQGALSKHIFHWKS----------LNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF 754 (959)
Q Consensus 685 ~lv~e~~~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~ 754 (959)
++|||||++|+|.++++.... ....+++|.+++.|+.|||+||+|||+ ++||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCC
Confidence 999999999999999976432 123569999999999999999999999 8999999999999999999
Q ss_pred cEEEeeccccccCCCCC-cceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 002149 755 RAKVSDFGLVKLAPDSE-RSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAW 832 (959)
Q Consensus 755 ~~ki~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~ 832 (959)
.+||+|||+|+...... ........||+.|||||++.+..++.++|||||||++|||+| |+.||.+....+....
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~--- 272 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC--- 272 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHH---
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH---
Confidence 99999999998654332 223345689999999999999999999999999999999999 8999988765442211
Q ss_pred HHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 833 FWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
+. +- ..+..+. .....+.+|+.+||+.||++|||++||++.|+.+.+.
T Consensus 273 i~----------~g--~~~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 273 IT----------QG--RELERPR---ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HH----------HT--CCCCCCT---TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HH----------cC--CCCCCcc---cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 11 00 0111111 2234688999999999999999999999999988763
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-51 Score=442.13 Aligned_cols=261 Identities=26% Similarity=0.443 Sum_probs=207.4
Q ss_pred cCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEEe
Q 002149 611 KNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYEY 690 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 690 (959)
+++...++||+|+||+||+|+++ ..||||+++....+....+.|.+|++++++++|||||+++|++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 46777889999999999999875 369999998665567778899999999999999999999998865 568999999
Q ss_pred cCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCCC
Q 002149 691 MPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDS 770 (959)
Q Consensus 691 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~~ 770 (959)
|++|+|.++++.. ...++|.+++.|+.|||+||+|||+ ++||||||||+|||+++++.+||+|||+|+.....
T Consensus 113 ~~gGsL~~~l~~~----~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 113 CEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred CCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999642 2569999999999999999999999 89999999999999999999999999999865432
Q ss_pred C-cceeecccccccccccccccc---CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 771 E-RSVVTRLAGTFGYLAPEYAVT---GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 771 ~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
. .......+||+.|||||++.+ +.|+.++|||||||++|||+||+.||.+........ ..+.. ..
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~--~~~~~---------~~ 254 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII--FMVGR---------GY 254 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH--HHHHT---------TC
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHH--HHHhc---------CC
Confidence 2 233455789999999999864 468999999999999999999999998765433211 10100 01
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
..+.+ .......+..+.+|+.+||+.||++|||+.||++.|+.+..
T Consensus 255 ~~p~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 255 ASPDL--SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CCCCS--TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred CCCCc--ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 11111 11112234578899999999999999999999999987654
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.6e-51 Score=446.07 Aligned_cols=259 Identities=25% Similarity=0.406 Sum_probs=210.8
Q ss_pred CCcccCcccccCceEEEEEEEc------CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEE
Q 002149 612 NFASENELGRGGFGVVYKGELD------DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 612 ~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 685 (959)
.++..++||+|+||.||+|.+. +++.||||+++... .....++|.+|+.++++++|||||+++|+|.++...+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 4556788999999999999863 46789999997542 3445678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhHHhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC
Q 002149 686 LVYEYMPQGALSKHIFHWKSL-----------NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF 754 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~ 754 (959)
+|||||++|+|.++++..... ....++|.+++.|+.|||+||+|||+ ++||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCC
Confidence 999999999999999653211 12469999999999999999999999 8999999999999999999
Q ss_pred cEEEeeccccccCCCCC-cceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 002149 755 RAKVSDFGLVKLAPDSE-RSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAW 832 (959)
Q Consensus 755 ~~ki~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~ 832 (959)
.+||+|||+|+...... ....+...||++|||||++.++.++.++|||||||++|||+| |+.||.+....+... .
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~---~ 259 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE---M 259 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH---H
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH---H
Confidence 99999999998553322 223445689999999999999999999999999999999999 899998876544211 1
Q ss_pred HHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 002149 833 FWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPL 892 (959)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 892 (959)
+.. ...++.++ ..+..+.+|+.+||+.||++|||+.||++.|+.+
T Consensus 260 i~~------------~~~~~~p~---~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 IRN------------RQVLPCPD---DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHT------------TCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHc------------CCCCCCcc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 110 00111111 2334688999999999999999999999988754
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.8e-51 Score=444.17 Aligned_cols=252 Identities=23% Similarity=0.371 Sum_probs=207.6
Q ss_pred cCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
++|++.+.||+|+||.||+|+. .+|+.||||++..........+.+.+|++++++++|||||++++++.+.+..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5899999999999999999975 479999999998776677778889999999999999999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+++|+|.+++... ....+++.+++.++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+....
T Consensus 104 y~~gg~L~~~i~~~---~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 104 YCEGGDLFKRINAQ---KGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp CCTTCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred CCCCCcHHHHHHHc---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 99999999999642 23568999999999999999999999 8999999999999999999999999999986643
Q ss_pred CCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCC
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDP 849 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (959)
.. ...+..+||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+.... +. ...+.+
T Consensus 178 ~~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~------i~------~~~~~~ 244 (350)
T 4b9d_A 178 TV-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLK------II------SGSFPP 244 (350)
T ss_dssp HH-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH------HH------HTCCCC
T ss_pred Cc-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH------HH------cCCCCC
Confidence 21 123456899999999999999999999999999999999999999988765432111 11 011111
Q ss_pred cccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 850 ILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 850 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
........+.+|+.+||+.||++|||+.|+++
T Consensus 245 ------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 245 ------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11112346789999999999999999999987
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.2e-50 Score=441.89 Aligned_cols=257 Identities=25% Similarity=0.409 Sum_probs=213.7
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
+.|+..++||+|+||.||+|... +|+.||||++.... ....+.+.+|+++|+.++|||||++++++.+.+..|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 56999999999999999999764 79999999997542 2334568899999999999999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+++|+|.+++.. ..+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+....
T Consensus 152 y~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 152 FLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp CCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred CCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 9999999998854 458999999999999999999999 8999999999999999999999999999997654
Q ss_pred CCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCC
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDP 849 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (959)
... .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....+....+ .....+
T Consensus 223 ~~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-------------~~~~~~ 288 (346)
T 4fih_A 223 EVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------------RDNLPP 288 (346)
T ss_dssp SSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-------------HHSSCC
T ss_pred CCC-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-------------HcCCCC
Confidence 332 345578999999999999999999999999999999999999999877654422111 111111
Q ss_pred cccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 850 ILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 850 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
.+. ........+.+|+.+||..||++|||++|+++ ++++.+..
T Consensus 289 ~~~---~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~--Hp~~~~~~ 331 (346)
T 4fih_A 289 RLK---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK--HPFLAKAG 331 (346)
T ss_dssp CCS---CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT--CGGGGGCC
T ss_pred CCC---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc--CHhhcCCC
Confidence 111 11122346789999999999999999999987 56666543
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1e-49 Score=426.43 Aligned_cols=251 Identities=24% Similarity=0.397 Sum_probs=202.1
Q ss_pred cccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe----CceEEEEE
Q 002149 614 ASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA----GYERLLVY 688 (959)
Q Consensus 614 ~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 688 (959)
+..++||+|+||.||+|... +++.||||++..........+.|.+|++++++++|||||++++++.+ ....++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999764 68899999998776677777889999999999999999999999875 34579999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCEEECC-CCcEEEeeccccc
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQS--FIHRDLKSSNILLGD-DFRAKVSDFGLVK 765 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dik~~NiLl~~-~~~~ki~DfGla~ 765 (959)
|||++|+|.+++... ..+++..+..++.||+.||+|||+ ++ ||||||||+|||++. ++.+||+|||+|+
T Consensus 109 Ey~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 999999999999652 568999999999999999999999 56 999999999999984 7999999999998
Q ss_pred cCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHH
Q 002149 766 LAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRA 845 (959)
Q Consensus 766 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (959)
..... .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+...... +...+ ..
T Consensus 181 ~~~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~--~~~~i---~~------- 244 (290)
T 3fpq_A 181 LKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IYRRV---TS------- 244 (290)
T ss_dssp GCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HHHHH---TT-------
T ss_pred eCCCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH--HHHHH---Hc-------
Confidence 65432 2345789999999998864 699999999999999999999999976543221 11101 00
Q ss_pred hcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 846 AIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
...+. .........+.+|+.+||+.||++|||++|+++ +++++
T Consensus 245 ~~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~--Hp~~~ 287 (290)
T 3fpq_A 245 GVKPA----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN--HAFFQ 287 (290)
T ss_dssp TCCCG----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGC
T ss_pred CCCCC----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc--Ccccc
Confidence 00000 000011235789999999999999999999977 44443
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.1e-49 Score=433.27 Aligned_cols=257 Identities=22% Similarity=0.264 Sum_probs=208.3
Q ss_pred cCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
+.|...++||+|+||.||+|+. .+|+.||||+++.... ..+|+.+++.++|||||++++++.++...|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4577788999999999999976 4789999999976432 2469999999999999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC-cEEEeeccccccCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF-RAKVSDFGLVKLAP 768 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~-~~ki~DfGla~~~~ 768 (959)
|+++|+|.+++... ..+++.++..++.||+.||+|||+ ++||||||||+|||++.++ ++||+|||+|+...
T Consensus 131 y~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 131 LLEGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred ccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 99999999999642 469999999999999999999999 8999999999999999987 69999999999664
Q ss_pred CCCcc----eeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHH
Q 002149 769 DSERS----VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLR 844 (959)
Q Consensus 769 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (959)
..... .....+||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+....+ ........
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i------~~~~~~~~ 276 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI------ASEPPPIR 276 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHH------HHSCCGGG
T ss_pred CCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH------HcCCCCch
Confidence 43211 123367999999999999999999999999999999999999999876543321111 00000000
Q ss_pred HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 845 AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
.........+.+++.+||+.||++|||+.|+++++...++....
T Consensus 277 ----------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~ 320 (336)
T 4g3f_A 277 ----------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGG 320 (336)
T ss_dssp ----------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTS
T ss_pred ----------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhh
Confidence 01112234678999999999999999999999999988876543
No 9
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2e-49 Score=443.00 Aligned_cols=258 Identities=24% Similarity=0.399 Sum_probs=214.4
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.+.|+..++||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+|+.++|||||++++++.+.+..||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT--CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 356999999999999999999764 79999999997542 233456889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
|||++|+|.+++.. ..+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+...
T Consensus 228 Ey~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 228 EFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp ECCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred eCCCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 99999999999854 458999999999999999999999 899999999999999999999999999999765
Q ss_pred CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
.... .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....+....+ .....
T Consensus 299 ~~~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-------------~~~~~ 364 (423)
T 4fie_A 299 KEVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------------RDNLP 364 (423)
T ss_dssp SSCC-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-------------HHSCC
T ss_pred CCCc-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-------------HcCCC
Confidence 4332 345578999999999999999999999999999999999999999877654432111 11111
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
+.+... ......+.+|+.+||..||++|||+.|+++ ++++.+..
T Consensus 365 ~~~~~~---~~~s~~~~dli~~~L~~dP~~R~ta~ell~--Hp~~~~~~ 408 (423)
T 4fie_A 365 PRLKNL---HKVSPSLKGFLDRLLVRDPAQRATAAELLK--HPFLAKAG 408 (423)
T ss_dssp CCCSCT---TSSCHHHHHHHHHHSCSSTTTSCCHHHHTT--CGGGGGCC
T ss_pred CCCccc---ccCCHHHHHHHHHHcCCChhHCcCHHHHhc--CHHhcCCC
Confidence 111111 112236789999999999999999999987 56666543
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.5e-49 Score=438.10 Aligned_cols=267 Identities=27% Similarity=0.389 Sum_probs=216.2
Q ss_pred hcCCcccCcccccCceEEEEEEEcC------CcEEEEEEcccccccHHHHHHHHHHHHHHHhcCC-CCceeEEEEEEeC-
Q 002149 610 TKNFASENELGRGGFGVVYKGELDD------GTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRH-RHLVSLLGYSVAG- 681 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~- 681 (959)
.++|+..+.||+|+||.||+|.+.. ++.||||++.... .....+.|.+|+++|.+++| ||||+++|+|.+.
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 5689999999999999999997642 3579999997653 44556789999999999965 8999999999764
Q ss_pred ceEEEEEEecCCCchhhHHhhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE
Q 002149 682 YERLLVYEYMPQGALSKHIFHWKS-----------LNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL 750 (959)
Q Consensus 682 ~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl 750 (959)
...++|||||++|+|.++++..+. .....+++.+++.++.|||+||+|||+ ++||||||||+|||+
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NILl 218 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILL 218 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCccceee
Confidence 568999999999999999976432 113468999999999999999999999 899999999999999
Q ss_pred CCCCcEEEeeccccccCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 002149 751 GDDFRAKVSDFGLVKLAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQY 828 (959)
Q Consensus 751 ~~~~~~ki~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~ 828 (959)
++++.+||+|||+|+....... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+..
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~- 297 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF- 297 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH-
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHH-
Confidence 9999999999999996544333 23445679999999999999999999999999999999998 99999876543221
Q ss_pred HHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 829 LAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
...+ .+-. .+..++. ...++.+++.+||+.||++|||+.||+++|.++++...
T Consensus 298 -~~~i----------~~g~--~~~~p~~---~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 298 -CRRL----------KEGT--RMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp -HHHH----------HHTC--CCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred -HHHH----------HcCC--CCCCCcc---CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 1111 1111 1111121 23467899999999999999999999999999987543
No 11
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.9e-49 Score=429.77 Aligned_cols=273 Identities=21% Similarity=0.323 Sum_probs=202.6
Q ss_pred cCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc----eEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY----ERLL 686 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 686 (959)
++|...++||+|+||.||+|++. |+.||||++... ......+..|+..+.+++|||||++++++.+.+ ..+|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 46778899999999999999885 899999998653 222223345666667889999999999998653 6799
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCCEEECCCCcEEEeec
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLA-----HQSFIHRDLKSSNILLGDDFRAKVSDF 761 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~Dik~~NiLl~~~~~~ki~Df 761 (959)
|||||++|+|.++++. ..++|..+.+++.|+++||+|||+.+ .++||||||||+|||++.++++||+||
T Consensus 79 V~Ey~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EecCCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 9999999999999964 46899999999999999999999831 249999999999999999999999999
Q ss_pred cccccCCCCCcc---eeeccccccccccccccccC------CCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 002149 762 GLVKLAPDSERS---VVTRLAGTFGYLAPEYAVTG------KITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAW 832 (959)
Q Consensus 762 Gla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~ 832 (959)
|+|+........ .....+||+.|||||++.+. .++.++|||||||++|||+||+.|+......+..+.. +
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~-~ 231 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD-L 231 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT-T
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchh-c
Confidence 999865443322 22346899999999998764 4678999999999999999998876533211100000 0
Q ss_pred HHhhhcchHHHH-----HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 833 FWNIKSDKEKLR-----AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 833 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
. ......+.+. ..+++.++......+....+.+|+.+||+.||++||||.||++.|+++.++
T Consensus 232 ~-~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 232 V-PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp S-CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred c-cccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 0 0000001111 112222221222345667889999999999999999999999999988765
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.3e-49 Score=427.27 Aligned_cols=250 Identities=22% Similarity=0.322 Sum_probs=209.2
Q ss_pred cCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
++|++.+.||+|+||+||+|+. .+|+.||||++.+... .....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4699999999999999999975 5799999999976432 2234577899999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++... ..+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+...
T Consensus 112 Ey~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 999999999999642 568999999999999999999999 899999999999999999999999999999764
Q ss_pred CCC-cceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 769 DSE-RSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 769 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
... .......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+... .+..
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~------~i~~--------- 248 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA------KIIK--------- 248 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHHH---------
T ss_pred CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHc---------
Confidence 332 234456799999999999999999999999999999999999999998765433211 1111
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
.....+. ....++.+|+.+||..||++|||++|+..
T Consensus 249 -~~~~~p~---~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 249 -LEYDFPE---KFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp -TCCCCCT---TCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred -CCCCCCc---ccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 0111111 11236789999999999999999998754
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-48 Score=414.58 Aligned_cols=252 Identities=25% Similarity=0.369 Sum_probs=194.6
Q ss_pred cCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccH-HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISK-KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
++|++.+.||+|+||.||+|.. .+|+.||||++.+..... ...+.+.+|+++++.++|||||++++++.+.+..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5799999999999999999975 479999999997654333 34567899999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+ +|+|.+++.. ...+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+...
T Consensus 93 Ey~-~g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 93 EYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred eCC-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 999 7899998854 2569999999999999999999999 899999999999999999999999999998654
Q ss_pred CCCcceeeccccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKI-TTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
+.. .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.+....+... .+..
T Consensus 164 ~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~------~i~~--------- 226 (275)
T 3hyh_A 164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK------NISN--------- 226 (275)
T ss_dssp -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHHH---------
T ss_pred CCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHH------HHHc---------
Confidence 432 2345689999999999998876 579999999999999999999998765433211 1110
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
.....+. .....+.+++.+||+.||++|||++|+++ +++++
T Consensus 227 -~~~~~p~---~~s~~~~~li~~~L~~dP~~R~s~~eil~--hpw~k 267 (275)
T 3hyh_A 227 -GVYTLPK---FLSPGAAGLIKRMLIVNPLNRISIHEIMQ--DDWFK 267 (275)
T ss_dssp -TCCCCCT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHH--CHHHH
T ss_pred -CCCCCCC---CCCHHHHHHHHHHccCChhHCcCHHHHHc--Ccccc
Confidence 0011011 11236789999999999999999999987 56654
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3e-49 Score=424.70 Aligned_cols=244 Identities=25% Similarity=0.309 Sum_probs=196.7
Q ss_pred cCCcccCcccccCceEEEEEEEc----CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD----DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 686 (959)
++|++.+.||+|+||+||+|+.. +++.||||++.+..........+.+|++++++++|||||++++++.+.+..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46999999999999999999752 47889999997654444444568899999999999999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.
T Consensus 104 vmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 99999999999999652 468999999999999999999999 8999999999999999999999999999986
Q ss_pred CCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
..+... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+....+ ..
T Consensus 176 ~~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i------~~-------- 240 (304)
T 3ubd_A 176 SIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI------LK-------- 240 (304)
T ss_dssp -----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HH--------
T ss_pred ccCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHH------Hc--------
Confidence 543322 234578999999999999999999999999999999999999999887654421111 10
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCH
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDM 882 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 882 (959)
.....+. .....+.+|+.+||+.||++|||+
T Consensus 241 --~~~~~p~---~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 241 --AKLGMPQ---FLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --CCCCCCT---TSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred --CCCCCCC---cCCHHHHHHHHHHcccCHHHCCCC
Confidence 1111111 122367899999999999999985
No 15
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-47 Score=430.91 Aligned_cols=313 Identities=23% Similarity=0.344 Sum_probs=236.0
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe------Cc
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA------GY 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 682 (959)
.++|++.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+++|+.++|||||++++++.. ..
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 35799999999999999999976 479999999998766566667889999999999999999999998764 35
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..|+||||| +|+|.+++.. .+.+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||
T Consensus 133 ~~~ivmE~~-~g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 133 SVYVVLDLM-ESDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp CEEEEEECC-SEEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEEeCC-CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecc
Confidence 789999999 5789998843 3679999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCC---cceeeccccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhc
Q 002149 763 LVKLAPDSE---RSVVTRLAGTFGYLAPEYAVTG-KITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKS 838 (959)
Q Consensus 763 la~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 838 (959)
+|+...... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+....+....+........
T Consensus 204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~ 283 (398)
T 4b99_A 204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS 283 (398)
T ss_dssp TCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred eeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 998654322 2234557999999999998875 568999999999999999999999998776554333221111000
Q ss_pred c-------hHHHHHhcCCcccCCCCCHHH-----HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCcc
Q 002149 839 D-------KEKLRAAIDPILEVNDDTFET-----FWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEY 906 (959)
Q Consensus 839 ~-------~~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~ 906 (959)
. .......+..........+.. ...+.+|+.+||..||++|||+.|+++ ++++.++..+++++...
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~--Hp~f~~~~~p~~~p~~~ 361 (398)
T 4b99_A 284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR--HPFLAKYHDPDDEPDCA 361 (398)
T ss_dssp GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT--SGGGTTTCCGGGSCCCS
T ss_pred hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc--CHhhCcCCCCccccCCC
Confidence 0 000111111111111111111 235779999999999999999999988 79999988888777665
Q ss_pred cCcccCCCh-hhhHHHHHHhhCCCccee
Q 002149 907 SGIDYSLPL-NQMVKDWQEAEGKDLSYV 933 (959)
Q Consensus 907 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 933 (959)
..++++... ....++|++...+++..+
T Consensus 362 ~~~~~~~~~~~~~~~~~k~~i~~ei~~~ 389 (398)
T 4b99_A 362 PPFDFAFDREALTRERIKEAIVAEIEDF 389 (398)
T ss_dssp SCCCCHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCccchhhcCHHHHHHHHHHHHHHH
Confidence 555443221 224566777665554433
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2e-46 Score=404.99 Aligned_cols=256 Identities=28% Similarity=0.382 Sum_probs=191.1
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc-------
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY------- 682 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 682 (959)
++|+..+.||+|+||.||+|+.. +|+.||||++.... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 46899999999999999999764 78999999987542 4455678999999999999999999999987543
Q ss_pred -----eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEE
Q 002149 683 -----ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAK 757 (959)
Q Consensus 683 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~k 757 (959)
..|+||||+++|+|.+++.... ......+..++.++.||+.||+|||+ ++||||||||+|||++.++.+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCC--SGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEE
Confidence 3689999999999999996522 22346677889999999999999999 8999999999999999999999
Q ss_pred EeeccccccCCCCCc-----------ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHH
Q 002149 758 VSDFGLVKLAPDSER-----------SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEER 826 (959)
Q Consensus 758 i~DfGla~~~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~ 826 (959)
|+|||+|+....... ...+..+||+.|||||++.+..|+.++|||||||++|||++ ||... .+.
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~--~~~ 233 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ--MER 233 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH--HHH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc--cHH
Confidence 999999986543221 11234679999999999999999999999999999999996 66532 121
Q ss_pred HHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 827 QYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
......+... .. +...........+++.+||+.||++|||+.|+++ +++++
T Consensus 234 ~~~~~~~~~~-------------~~--p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~--h~~~~ 284 (299)
T 4g31_A 234 VRTLTDVRNL-------------KF--PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE--NAVFE 284 (299)
T ss_dssp HHHHHHHHTT-------------CC--CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT--SGGGC
T ss_pred HHHHHHHhcC-------------CC--CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc--CHhhC
Confidence 1111111100 00 0000112234568999999999999999999977 34443
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4e-45 Score=405.89 Aligned_cols=203 Identities=23% Similarity=0.380 Sum_probs=173.3
Q ss_pred HHHHhcCCcccCcccccCceEEEEEEEc----CCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEe
Q 002149 606 LRNVTKNFASENELGRGGFGVVYKGELD----DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVA 680 (959)
Q Consensus 606 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 680 (959)
+..+.++|++.++||+|+||.||+|+.+ +++.||||++... ....++.+|+++++.+ +|||||++++++.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 3346788999999999999999999653 4678999988654 2234678999999998 69999999999999
Q ss_pred CceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC-CcEEEe
Q 002149 681 GYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDD-FRAKVS 759 (959)
Q Consensus 681 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~-~~~ki~ 759 (959)
.+..++||||+++|+|.+++ +.+++.++..++.||+.||+|||+ ++||||||||+|||++.+ +.+||+
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~--------~~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~ 160 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDIL--------NSLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALV 160 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHH--------TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEEC
T ss_pred CCEEEEEEeCCCcccHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEEC
Confidence 99999999999999999988 358999999999999999999999 899999999999999876 799999
Q ss_pred eccccccCCCCCc---------------------------ceeeccccccccccccccccC-CCCccchHHHHHHHHHHH
Q 002149 760 DFGLVKLAPDSER---------------------------SVVTRLAGTFGYLAPEYAVTG-KITTKVDVFSFGVVLMEL 811 (959)
Q Consensus 760 DfGla~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~ll~el 811 (959)
|||+|+...+... ...+..+||+.|||||++.+. .++.++||||+||++|||
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~el 240 (361)
T 4f9c_A 161 DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240 (361)
T ss_dssp CCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred cCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHH
Confidence 9999985543221 112345799999999999875 589999999999999999
Q ss_pred HhCCCCCCCCCh
Q 002149 812 LTGLMALDESRP 823 (959)
Q Consensus 812 ltg~~p~~~~~~ 823 (959)
++|+.||.....
T Consensus 241 l~G~~Pf~~~~~ 252 (361)
T 4f9c_A 241 LSGRYPFYKASD 252 (361)
T ss_dssp HHTCSSSSCCSS
T ss_pred HHCCCCCCCCCC
Confidence 999999965543
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.2e-43 Score=411.02 Aligned_cols=257 Identities=25% Similarity=0.350 Sum_probs=211.8
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++|+.++|||||++++++.+....++||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc--chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 46899999999999999999976 47999999998764 3445677899999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC--CcEEEeecccccc
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDD--FRAKVSDFGLVKL 766 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~--~~~ki~DfGla~~ 766 (959)
|||++|+|.+++.. ....+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 234 E~~~gg~L~~~i~~----~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 234 EFMSGGELFEKVAD----EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp ECCCCCBHHHHHTC----TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred eecCCCcHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 99999999998843 22569999999999999999999999 899999999999999854 8999999999997
Q ss_pred CCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
..... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+....+ ..
T Consensus 307 ~~~~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i------~~-------- 370 (573)
T 3uto_A 307 LDPKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV------KS-------- 370 (573)
T ss_dssp CCTTS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH------HT--------
T ss_pred ccCCC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH------Hh--------
Confidence 75433 344568999999999999999999999999999999999999999887654432111 00
Q ss_pred cCCcccCCCCC-HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 847 IDPILEVNDDT-FETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 847 ~~~~~~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
......... ......+.+|+.+||+.||++||++.|+++ ++++..
T Consensus 371 --~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~--Hpw~~~ 416 (573)
T 3uto_A 371 --CDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE--HPWLTP 416 (573)
T ss_dssp --TCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH--STTTSC
T ss_pred --CCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc--CcCcCC
Confidence 000000000 011235779999999999999999999987 455443
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.1e-43 Score=388.59 Aligned_cols=285 Identities=39% Similarity=0.673 Sum_probs=231.8
Q ss_pred HHHHHHHhcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc
Q 002149 603 VQVLRNVTKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY 682 (959)
Q Consensus 603 ~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 682 (959)
..++..++++|+..+.||+|+||.||+|..++++.||||++... .....+.+.+|+++++.++||||+++++++....
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33445677899999999999999999999888999999998764 3345678999999999999999999999999999
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..++||||+++|+|.+++.... .....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSC-CCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCT
T ss_pred eEEEEEEcCCCCcHHHHHhccC-CCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeecc
Confidence 9999999999999999985432 223469999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCC-cceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchH
Q 002149 763 LVKLAPDSE-RSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKE 841 (959)
Q Consensus 763 la~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 841 (959)
+++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....+.+......|...... ..
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~-~~ 263 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN-NG 263 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT-TT
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc-cc
Confidence 998654322 2223445689999999999999999999999999999999999999987655443333333221111 11
Q ss_pred HHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 842 KLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
.+...+++... ..........+.+++.+||+.||++||++.++++.|+.+++.
T Consensus 264 ~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 264 QLEQIVDPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCCSSSSSSCT-TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cHHHhcChhhc-cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 22233333332 334567788899999999999999999999999999988764
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.7e-43 Score=407.53 Aligned_cols=255 Identities=22% Similarity=0.312 Sum_probs=201.7
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccH-HHHHHHH---HHHHHHHhcCCCCceeEEEEEEeCceEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISK-KAVDEFH---SEIAVLSKVRHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~~ 685 (959)
++|++.+.||+|+||.||+|+.. +|+.||||++.+..... .....+. .++.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57999999999999999999764 79999999997543221 1122233 4456667779999999999999999999
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+||||++||+|.+++... ..+++..+..++.||+.||+|||+ ++||||||||+|||++.+|.+||+|||+|+
T Consensus 269 lVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceee
Confidence 999999999999999652 569999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCcceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHH
Q 002149 766 LAPDSERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLR 844 (959)
Q Consensus 766 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (959)
...... ....+||+.|||||++.. ..|+.++||||+||++|||++|+.||.+....+...+...+
T Consensus 341 ~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i----------- 406 (689)
T 3v5w_A 341 DFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT----------- 406 (689)
T ss_dssp ECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH-----------
T ss_pred ecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh-----------
Confidence 765432 345689999999999975 57999999999999999999999999764332221111111
Q ss_pred HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhHh
Q 002149 845 AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPD-----MGHAVNVLAPLVE 894 (959)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~~L~~~~~ 894 (959)
.......+. .....+.+|+.+||..||.+|++ ++||.+ +++++
T Consensus 407 --~~~~~~~p~---~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~--HpfF~ 454 (689)
T 3v5w_A 407 --LTMAVELPD---SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE--SPFFR 454 (689)
T ss_dssp --HHCCCCCCT---TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT--SGGGT
T ss_pred --cCCCCCCCc---cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc--Ccccc
Confidence 111111111 12236789999999999999998 688866 44443
No 21
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.5e-42 Score=420.01 Aligned_cols=280 Identities=21% Similarity=0.306 Sum_probs=234.4
Q ss_pred CCChhhHHHHHHHHHhcCCCCCCCCCCCC-----CC--CCCCCC------------cceEec-CCcEEEEEecCCccccc
Q 002149 35 ATDPGDIDILNQFRKNLENPELLQWPKSG-----DP--CGPPCW------------KHVFCS-NSRVTQIQVSSVGLKGT 94 (959)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~~~~w~~~~-----~~--C~~~~w------------~gv~C~-~~~v~~l~l~~~~l~g~ 94 (959)
++...|+.||++||+++.+| +|+.++ +| |. | .||.|+ .++|+.|+|+++++.|.
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~---W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLN---WNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCS---CCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEE
T ss_pred ccchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccc---cccccccccccCcCceEecCCCCEEEEECccCCCCCc
Confidence 34567999999999999876 786554 55 43 9 999998 48999999999999999
Q ss_pred CcccccCCCCCcEEec-cCCcCCCC-------------------------------------------------------
Q 002149 95 LPQNLNQLSKLENIGL-QKNQFRGE------------------------------------------------------- 118 (959)
Q Consensus 95 ~~~~l~~l~~L~~L~L-s~N~l~~~------------------------------------------------------- 118 (959)
+|++|++|++|++|+| ++|.+.|.
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 77754332
Q ss_pred ---------------------CC-CccCCCCccEEecCCCCCCC------------------CChhh-hcCCCCCcEEEc
Q 002149 119 ---------------------LP-SFSGLSNLKYAYLDGNNFDT------------------IPADF-FDGLENLQVLAL 157 (959)
Q Consensus 119 ---------------------~~-~~~~l~~L~~L~L~~N~l~~------------------i~~~~-~~~l~~L~~L~L 157 (959)
+| .|+++++|++|+|++|+|++ +|... |.++++|++|+|
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~L 498 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVEL 498 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred cccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEEC
Confidence 44 68899999999999999998 77663 449999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccc-cCC-CCChhhcCCC-------CCCEEEecCCcCCCCCCc--ccccC-
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCN-LAG-QLPDFLGNFA-------SLQNLKLSGNNLTGPIPE--SFKGL- 225 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~-l~~-~~p~~l~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l- 225 (959)
++|.+.+ .+|..+.++++|+.|+|++|+ +++ .+|..++.++ +|+.|+|++|+++ .+|. .|..+
T Consensus 499 s~N~l~~----~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~ 573 (876)
T 4ecn_A 499 YNCPNMT----QLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMV 573 (876)
T ss_dssp ESCTTCC----SCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCT
T ss_pred cCCCCCc----cChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCC
Confidence 9999887 789999999999999999998 888 8888777665 9999999999999 7887 78776
Q ss_pred CcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCC-CCEEeCCCCcCCCCCccccccc---cCC
Q 002149 226 NLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTS-LKDLNLNSNQFVGLIPPSLASL---SLD 301 (959)
Q Consensus 226 ~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~~---~L~ 301 (959)
+|..|.+.++....++ .++++++|+.|+|++|+++ .+|..+..+++ |++|+|++|+|+ .+|..+... +|+
T Consensus 574 ~L~~L~Ls~N~l~~lp----~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~ 647 (876)
T 4ecn_A 574 KLGLLDCVHNKVRHLE----AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMG 647 (876)
T ss_dssp TCCEEECTTSCCCBCC----CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEE
T ss_pred CCCEEECCCCCcccch----hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCC
Confidence 5777777776655433 6889999999999999999 89999999999 999999999999 677777665 399
Q ss_pred eEeCCCCcCCCCCCccc----------ccccccccCcccC
Q 002149 302 HLDLNNNMFMGPVPKSK----------AYKYSYSSNAFCQ 331 (959)
Q Consensus 302 ~L~L~~N~l~~~ip~~~----------~~~~~~~~~~~~~ 331 (959)
.|+|++|+++|.+|... ...+.+++|.+..
T Consensus 648 ~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~ 687 (876)
T 4ecn_A 648 SVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQK 687 (876)
T ss_dssp EEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCS
T ss_pred EEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCc
Confidence 99999999998877432 2334566666653
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.5e-42 Score=384.09 Aligned_cols=289 Identities=40% Similarity=0.658 Sum_probs=232.4
Q ss_pred eeecHHHHHHHhcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEE
Q 002149 599 LVISVQVLRNVTKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYS 678 (959)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 678 (959)
..++..++....++|+..+.||+|+||.||+|...+|+.||||++..... ......+.+|+++++.++||||+++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC-chHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 34677889999999999999999999999999888899999999876422 22233688999999999999999999999
Q ss_pred EeCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEE
Q 002149 679 VAGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKV 758 (959)
Q Consensus 679 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki 758 (959)
......++||||+++|+|.+++.... .....+++..+..++.|++.||+|||+.+..+|+||||||+|||++.++.+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCS-TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 99999999999999999999997633 23356999999999999999999999932239999999999999999999999
Q ss_pred eeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHHhh
Q 002149 759 SDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPE--ERQYLAAWFWNI 836 (959)
Q Consensus 759 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~--~~~~~~~~~~~~ 836 (959)
+|||+++..............||+.|+|||++.+..++.++|||||||++|||++|+.||+..... .......|+...
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 999999977655555555667999999999999999999999999999999999999999632111 111122233222
Q ss_pred hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 002149 837 KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAP 891 (959)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 891 (959)
.. ........+.... ..........+.+++.+|++.||++|||+.+|+++|+.
T Consensus 256 ~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 256 LK-EKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TS-SCCSTTSSCTTCT-TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hh-chhhhhhcChhhc-cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 21 1222233333332 34556777889999999999999999999999999975
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=6.9e-42 Score=374.92 Aligned_cols=265 Identities=31% Similarity=0.485 Sum_probs=209.0
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
..+|++.+.||+|+||.||+|.. +|+.||||++..........+.+.+|++++++++||||+++++++......++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 56899999999999999999987 48899999998776666777889999999999999999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQS--FIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|+++|+|.+++.... ....+++..++.++.||+.||+|||+ .+ |+||||||+||+++.++.+||+|||+++..
T Consensus 115 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 115 YLSRGSLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp CCTTCBHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred cCCCCcHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999986421 11348999999999999999999999 78 999999999999999999999999999854
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+...... . .
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~-------------~-~ 254 (309)
T 3p86_A 190 ASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG-------------F-K 254 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH-------------H-S
T ss_pred cccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-------------h-c
Confidence 4322 12334579999999999999999999999999999999999999998776544221110 0 0
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
..... ........+.+++.+||+.||++||++.++++.|+++++...+
T Consensus 255 ~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 255 CKRLE---IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp CCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred CCCCC---CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 00111 1112234688999999999999999999999999999876544
No 24
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.8e-42 Score=410.98 Aligned_cols=409 Identities=19% Similarity=0.212 Sum_probs=300.1
Q ss_pred CChhhHHHHHHHHHhcCCCC----------CCCCCCCCCCCCCCCC---cceEecC-CcEEEEEecCCcccccCcccccC
Q 002149 36 TDPGDIDILNQFRKNLENPE----------LLQWPKSGDPCGPPCW---KHVFCSN-SRVTQIQVSSVGLKGTLPQNLNQ 101 (959)
Q Consensus 36 ~~~~~~~~l~~~~~~~~~~~----------~~~w~~~~~~C~~~~w---~gv~C~~-~~v~~l~l~~~~l~g~~~~~l~~ 101 (959)
....|+.||.+|++++..+. ..+|..+.++|. | .||+|+. ++|+.|+|+++++.|.+|+++++
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~---w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDM---WGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGG---TTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGG
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCccc---ccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhc
Confidence 34569999999999986543 237987777776 9 9999975 59999999999999999999999
Q ss_pred CCCCcEEeccCCcC------------------------------------------------------------------
Q 002149 102 LSKLENIGLQKNQF------------------------------------------------------------------ 115 (959)
Q Consensus 102 l~~L~~L~Ls~N~l------------------------------------------------------------------ 115 (959)
|++|++|+|++|.+
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 99999999999843
Q ss_pred ------------CCCCCCccCCCCccEEecCCCCCCC------------------CChhhhc--CCCCCcEEEccCcccC
Q 002149 116 ------------RGELPSFSGLSNLKYAYLDGNNFDT------------------IPADFFD--GLENLQVLALDSNNFN 163 (959)
Q Consensus 116 ------------~~~~~~~~~l~~L~~L~L~~N~l~~------------------i~~~~~~--~l~~L~~L~Ls~N~l~ 163 (959)
+++++.|+++++|++|+|++|+|++ +|.. +. ++++|++|+|++|.+.
T Consensus 184 ~~l~l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~-l~~~~l~~L~~L~L~~n~l~ 262 (636)
T 4eco_A 184 KDTQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTED-LKWDNLKDLTDVEVYNCPNL 262 (636)
T ss_dssp CTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEECCTTC
T ss_pred hhhhhccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchh-hhhcccCCCCEEEecCCcCC
Confidence 3433368999999999999999999 6654 77 9999999999999998
Q ss_pred CCCCCCCCccccCccccCeecccccc-cCC-CCChhhcCC------CCCCEEEecCCcCCCCCCc--ccccC-Ccccccc
Q 002149 164 ASKGWSFPKGLQSSAQLTNLSCMSCN-LAG-QLPDFLGNF------ASLQNLKLSGNNLTGPIPE--SFKGL-NLVNLWL 232 (959)
Q Consensus 164 ~~~~~~lp~~l~~l~~L~~L~l~~n~-l~~-~~p~~l~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l-~l~~L~~ 232 (959)
+ .+|..+.++++|++|++++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .+..+ +++.|.+
T Consensus 263 ~----~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L 337 (636)
T 4eco_A 263 T----KLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLEC 337 (636)
T ss_dssp S----SCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEEC
T ss_pred c----cChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeC
Confidence 7 789999999999999999998 998 899988887 99999999999999 7887 78776 5666666
Q ss_pred cccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCC-CCEEeCCCCcCCCCCccccccc---cCCeEeCCCC
Q 002149 233 NDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTS-LKDLNLNSNQFVGLIPPSLASL---SLDHLDLNNN 308 (959)
Q Consensus 233 ~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~~---~L~~L~L~~N 308 (959)
.++.. .+.++.+.++++|++|+|++|+++ .+|..+..+++ |++|+|++|+++ .+|..+... +|+.|+|++|
T Consensus 338 ~~N~l---~g~ip~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N 412 (636)
T 4eco_A 338 LYNQL---EGKLPAFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYN 412 (636)
T ss_dssp CSCCC---EEECCCCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSS
T ss_pred cCCcC---ccchhhhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCC
Confidence 65544 433336788899999999999998 88888999998 999999999998 667776654 5889999999
Q ss_pred cCCCCCCcccc------------cccccccCcccCCCCCCCCchhhHHHHhhcc-CCCCC------------------cc
Q 002149 309 MFMGPVPKSKA------------YKYSYSSNAFCQPTEGVPCAPEVMALIDFLG-GLNYP------------------PR 357 (959)
Q Consensus 309 ~l~~~ip~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------------~~ 357 (959)
.+++.+|.... ..+.+++|.+...+.... ....-+..+. ..+.+ +.
T Consensus 413 ~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~---~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~ 489 (636)
T 4eco_A 413 EIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELF---STGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYL 489 (636)
T ss_dssp CTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHH---HTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGG
T ss_pred cCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHH---ccCCCCCEEECCCCCCCCcCHHHhccccccccccCC
Confidence 99888775433 224556666653322110 0000000000 00000 02
Q ss_pred cccccCCCCCCCcccccccC--CCCcccEEECCCCcccccCCccccCcCcCCEEeC------cccccccccCCCccCCCC
Q 002149 358 LVTSWSGNDPCKSWLGLSCG--TNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKL------QSNNISGQIPTNWTNLKS 429 (959)
Q Consensus 358 l~~~~~~~~~~~~~~~~~~~--~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------~~N~l~g~~p~~l~~l~~ 429 (959)
+.......+.... ++..+. .+++|+.|+|++|+|++ +|..+.++++|+.|+| ++|++.+.+|..+.++++
T Consensus 490 L~~L~Ls~N~l~~-lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~ 567 (636)
T 4eco_A 490 LTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPS 567 (636)
T ss_dssp CCEEECCSSCCCB-CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSS
T ss_pred ccEEECcCCcCCc-cChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCC
Confidence 2222223333332 222233 66777777777777776 6777777777777777 456667777777777777
Q ss_pred CCeEeCCCCccCCCCCC--CCCcceecccCCCCCCCC
Q 002149 430 LTLLDLSQNNLSPPLPK--FSGAVKLSLDGNPLLNGK 464 (959)
Q Consensus 430 L~~L~Ls~N~l~~~~p~--~~~~~~~~l~~N~~~c~~ 464 (959)
|+.|+|++|++ +.+|. +..+..+++.+|++.|-.
T Consensus 568 L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 568 LTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISID 603 (636)
T ss_dssp CCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEEE
T ss_pred CCEEECCCCcC-CccCHhHhCcCCEEECcCCCCcccc
Confidence 77777777777 45553 345566777777776643
No 25
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.7e-41 Score=372.72 Aligned_cols=256 Identities=20% Similarity=0.325 Sum_probs=214.7
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
..+|++.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+++++.++||||+++++++......++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46899999999999999999976 57999999999876666677788999999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++... ..+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 94 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp CCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred ECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999998542 458999999999999999999999 899999999999999999999999999998654
Q ss_pred CCCcceeeccccccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKIT-TKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
... ......||+.|+|||++.+..++ .++||||+||++|||++|+.||.+....+..... .
T Consensus 166 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i----------------~ 227 (328)
T 3fe3_A 166 VGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV----------------L 227 (328)
T ss_dssp SSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----------------H
T ss_pred CCC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHH----------------H
Confidence 432 23456899999999999888775 7899999999999999999999887654321111 0
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
......+. .....+.+++.+||..||.+|||++|+++ ++++...
T Consensus 228 ~~~~~~p~---~~s~~~~~li~~~L~~dP~~R~t~~eil~--h~~~~~~ 271 (328)
T 3fe3_A 228 RGKYRIPF---YMSTDCENLLKRFLVLNPIKRGTLEQIMK--DRWINAG 271 (328)
T ss_dssp HCCCCCCT---TSCHHHHHHHHHHCCSSTTTSCCHHHHTT--CTTTTTT
T ss_pred hCCCCCCC---CCCHHHHHHHHHHCCCChhHCcCHHHHhc--CHhhcCC
Confidence 00111111 12235779999999999999999999987 5665543
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4e-41 Score=366.95 Aligned_cols=256 Identities=24% Similarity=0.400 Sum_probs=210.9
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc--ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 46899999999999999999975 578999999987542 233466889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 97 e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 97 EYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp ECCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999999854 458999999999999999999999 899999999999999999999999999998665
Q ss_pred CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||............. ....
T Consensus 168 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~-------------~~~~ 233 (297)
T 3fxz_A 168 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-------------TNGT 233 (297)
T ss_dssp STTC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-------------HHCS
T ss_pred Cccc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-------------hCCC
Confidence 4332 2344679999999999999999999999999999999999999998776544322111 0000
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
+.. .........+.+++.+||+.||++|||+.|+++ +++++.
T Consensus 234 ~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~--h~~~~~ 275 (297)
T 3fxz_A 234 PEL---QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ--HQFLKI 275 (297)
T ss_dssp CCC---SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT--CGGGGG
T ss_pred CCC---CCccccCHHHHHHHHHHccCChhHCcCHHHHhh--Chhhcc
Confidence 011 011122346789999999999999999999977 455443
No 27
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-41 Score=384.32 Aligned_cols=315 Identities=24% Similarity=0.380 Sum_probs=227.0
Q ss_pred HHHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC-CCCceeEEEEEEeCc--
Q 002149 607 RNVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR-HRHLVSLLGYSVAGY-- 682 (959)
Q Consensus 607 ~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-- 682 (959)
+.+.++|++.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.+++.+. ||||+++++++...+
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 35678999999999999999999975 47899999999766556677788899999999997 999999999997544
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..++||||++ |+|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG 154 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFG 154 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCc
Confidence 6899999995 799888854 468999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCC--------------------Ccceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 002149 763 LVKLAPDS--------------------ERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDES 821 (959)
Q Consensus 763 la~~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~ 821 (959)
+|+..... .....+..+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 155 LSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp TCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99855321 1122344689999999999987 67899999999999999999999999987
Q ss_pred ChHHHHHHHHHHHhhhcchHHHH---------------HhcCCcccCCCCCH--------------HHHHHHHHHHHhcc
Q 002149 822 RPEERQYLAAWFWNIKSDKEKLR---------------AAIDPILEVNDDTF--------------ETFWTIAELAGHCT 872 (959)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~--------------~~~~~l~~l~~~cl 872 (959)
...+............. .+.+. .............. .....+.+|+.+||
T Consensus 235 ~~~~~~~~i~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 235 STMNQLERIIGVIDFPS-NEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313 (388)
T ss_dssp SHHHHHHHHHHHHCCCC-HHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhcCCCC-HHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh
Confidence 65543322211100000 00000 00000000000000 11235789999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCcccCcccCCC--hhhhHHHHHHhhCCCcceee
Q 002149 873 SREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEYSGIDYSLP--LNQMVKDWQEAEGKDLSYVS 934 (959)
Q Consensus 873 ~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 934 (959)
..||++|||++|+++ ++++..++.+.+++.....++.+.. ...++++|++..++++....
T Consensus 314 ~~dP~~R~t~~e~l~--Hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (388)
T 3oz6_A 314 QFNPNKRISANDALK--HPFVSIFHNPNEEPNCDHIITIPINDNVKHSIDDYRNLVYSEISRRK 375 (388)
T ss_dssp CSSGGGSCCHHHHTT--STTTTTTCCGGGCCCCSSCCCCC------CCHHHHHHHHHHHHHHHH
T ss_pred ccCcccCCCHHHHhC--CHHHHHhcCCccCCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhh
Confidence 999999999999988 7888888877777665544444332 35677888888777766554
No 28
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6e-41 Score=376.96 Aligned_cols=266 Identities=26% Similarity=0.399 Sum_probs=216.8
Q ss_pred hcCCcccCcccccCceEEEEEEEc--------CCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEe
Q 002149 610 TKNFASENELGRGGFGVVYKGELD--------DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVA 680 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 680 (959)
.++|.+.+.||+|+||.||+|... ++..||||++... ......+.+.+|+++++.+ +||||+++++++..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 367889999999999999999752 3567999999765 3455677899999999999 89999999999999
Q ss_pred CceEEEEEEecCCCchhhHHhhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEE
Q 002149 681 GYERLLVYEYMPQGALSKHIFHWKS-----------LNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNIL 749 (959)
Q Consensus 681 ~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiL 749 (959)
....++||||+++|+|.+++..... .....+++.+++.++.||++||+|||+ ++|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEE
Confidence 9999999999999999999976432 122468999999999999999999999 89999999999999
Q ss_pred ECCCCcEEEeeccccccCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 002149 750 LGDDFRAKVSDFGLVKLAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQ 827 (959)
Q Consensus 750 l~~~~~~ki~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~ 827 (959)
++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+..
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~ 315 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999986544322 12233567889999999999999999999999999999999 99999876654321
Q ss_pred HHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 828 YLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
... ...... .........+.+++.+||+.||++||++.|+++.|+.++....
T Consensus 316 ~~~-------------~~~~~~-----~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 316 KLL-------------KEGHRM-----DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp HHH-------------HTTCCC-----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHH-------------hcCCCC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 111 000000 1111223468899999999999999999999999999887543
No 29
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.3e-41 Score=372.14 Aligned_cols=281 Identities=20% Similarity=0.246 Sum_probs=226.0
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++.+ +||||+++++++..+...++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS----RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC----SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc----chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 46799999999999999999975 578999999987542 123578999999999 899999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCc-----EEEeecc
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFR-----AKVSDFG 762 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~-----~ki~DfG 762 (959)
|||+ +++|.+++... ...+++.+++.++.||+.||+|||+ .+|+||||||+|||++.++. +||+|||
T Consensus 84 ~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 84 LELL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp EECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred EEeC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 9999 99999998652 2579999999999999999999999 89999999999999998887 9999999
Q ss_pred ccccCCCCCcc------eeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhh
Q 002149 763 LVKLAPDSERS------VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNI 836 (959)
Q Consensus 763 la~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~ 836 (959)
+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+.......+...
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~ 235 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 235 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHH
T ss_pred cceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhh
Confidence 99865443221 124568999999999999999999999999999999999999999876543322222111100
Q ss_pred hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCcccCcccCCC
Q 002149 837 KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEYSGIDYSLP 914 (959)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.. ....... .. ..+ .+.+++.+|++.||.+||+++++++.|+.++++.....+...+|.......|
T Consensus 236 ~~--~~~~~~~------~~---~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~~~~~~p 301 (330)
T 2izr_A 236 KR--ATPIEVL------CE---NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIGKQLPTP 301 (330)
T ss_dssp HH--HSCHHHH------TT---TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTTTSCCCCC
T ss_pred hc--cCCHHHH------hc---cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCCCCCcCCC
Confidence 00 0000000 00 012 6889999999999999999999999999999999888888888875544333
No 30
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.7e-41 Score=373.00 Aligned_cols=273 Identities=24% Similarity=0.351 Sum_probs=210.2
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc----eEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY----ERL 685 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~ 685 (959)
.++|+..+.||+|+||.||+|+.. ++.||||++... ......+.+|+.++++++||||+++++++.... ..+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 357999999999999999999876 899999998653 334455667999999999999999999998743 479
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC----------CeEecCCCCCCEEECCCCc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQ----------SFIHRDLKSSNILLGDDFR 755 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~----------~ivH~Dik~~NiLl~~~~~ 755 (959)
+||||+++|+|.+++.. ..+++..++.++.|++.||+|||+ . +|+||||||+|||++.++.
T Consensus 99 lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~ 169 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLT 169 (322)
T ss_dssp EEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCC
T ss_pred EEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCe
Confidence 99999999999999954 458999999999999999999999 6 9999999999999999999
Q ss_pred EEEeeccccccCCCCCc-ceeecccccccccccccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 002149 756 AKVSDFGLVKLAPDSER-SVVTRLAGTFGYLAPEYAVT-----GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYL 829 (959)
Q Consensus 756 ~ki~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~ 829 (959)
+||+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.........
T Consensus 170 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~ 249 (322)
T 3soc_A 170 ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPF 249 (322)
T ss_dssp EEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTT
T ss_pred EEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccch
Confidence 99999999986544322 22334679999999999976 3566789999999999999999999976543211110
Q ss_pred HHHHHhhhcchHHHHHhc-C----CcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 830 AAWFWNIKSDKEKLRAAI-D----PILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
........ ....+...+ . +.+............+.+++.+||+.||++|||+.+|++.|+++.+..
T Consensus 250 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 250 EEEIGQHP-SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp HHHHCSSC-CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred hhhhccCC-chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 00000000 011111111 1 111111112345567899999999999999999999999999887653
No 31
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.8e-41 Score=375.57 Aligned_cols=285 Identities=16% Similarity=0.207 Sum_probs=215.7
Q ss_pred hcCCcccCcccccCceEEEEEEEcC------CcEEEEEEcccccccHHH---------HHHHHHHHHHHHhcCCCCceeE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDD------GTKIAVKRMEAGVISKKA---------VDEFHSEIAVLSKVRHRHLVSL 674 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~------~~~vavK~~~~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~l 674 (959)
.++|++.+.||+|+||.||+|.+.. ++.||||++......... ...+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4689999999999999999998754 478999998754211100 1123345566777789999999
Q ss_pred EEEEEeC----ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE
Q 002149 675 LGYSVAG----YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL 750 (959)
Q Consensus 675 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl 750 (959)
++++... ...++||||+ +++|.+++... ...+++.+++.++.||+.||+|||+ ++|+||||||+|||+
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill 185 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEE
Confidence 9998764 4579999999 99999998642 2579999999999999999999999 899999999999999
Q ss_pred C--CCCcEEEeeccccccCCCCCcc------eeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 002149 751 G--DDFRAKVSDFGLVKLAPDSERS------VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESR 822 (959)
Q Consensus 751 ~--~~~~~ki~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~ 822 (959)
+ .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9 8899999999999865432211 1133569999999999999999999999999999999999999998643
Q ss_pred hHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCC
Q 002149 823 PEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDE 902 (959)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~ 902 (959)
........ .... ....+...+++.+... ..+..+.+++.+|++.||.+||++.++++.|+.+++......+.
T Consensus 266 ~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~ 337 (364)
T 3op5_A 266 KDPKYVRD--SKIR--YRENIASLMDKCFPAA----NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDG 337 (364)
T ss_dssp TCHHHHHH--HHHH--HHHCHHHHHHHHSCTT----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCC
T ss_pred cCHHHHHH--HHHH--hhhhHHHHHHHhcccc----cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCC
Confidence 32211111 1000 0112222222222111 11236889999999999999999999999999999999999999
Q ss_pred CCcccCcc
Q 002149 903 PEEYSGID 910 (959)
Q Consensus 903 ~~~~~~~~ 910 (959)
+.+|...+
T Consensus 338 ~~dw~~~~ 345 (364)
T 3op5_A 338 KLDLSVVE 345 (364)
T ss_dssp CCCC----
T ss_pred ccceEecc
Confidence 99987544
No 32
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=364.68 Aligned_cols=263 Identities=26% Similarity=0.390 Sum_probs=213.8
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
++|...+.||+|+||.||+|... +++.||+|++... .....+.+.+|+++++.++||||+++++++.++...++|||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 57888999999999999999764 6899999988643 56677889999999999999999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+++|+|.+++... ...+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++....
T Consensus 88 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 88 YIKGGTLRGIIKSM----DSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp CCTTCBHHHHHHHC----CTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred ecCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 99999999999652 2568999999999999999999999 8999999999999999999999999999986543
Q ss_pred CCcce-------------eeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhh
Q 002149 770 SERSV-------------VTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNI 836 (959)
Q Consensus 770 ~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~ 836 (959)
..... .....||+.|+|||++.+..++.++|||||||++|||++|..|+...........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~------- 233 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG------- 233 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS-------
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh-------
Confidence 32211 1145799999999999999999999999999999999999999876443221000
Q ss_pred hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 837 KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
............+.. ...+.+++.+|++.||++||++.++++.|+.+......
T Consensus 234 ~~~~~~~~~~~~~~~---------~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 234 LNVRGFLDRYCPPNC---------PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp BCHHHHHHHTCCTTC---------CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccccCCCCC---------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 000111111111111 12577999999999999999999999999998776543
No 33
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2e-40 Score=362.13 Aligned_cols=276 Identities=18% Similarity=0.246 Sum_probs=223.0
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++.+ +|+|++++++++......++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 46799999999999999999975 578999999986432 234578899999999 799999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCc-----EEEeecc
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFR-----AKVSDFG 762 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~-----~ki~DfG 762 (959)
|||+ +++|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.++. +||+|||
T Consensus 85 ~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred EEec-CCCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 9999 99999999642 2469999999999999999999999 89999999999999987766 9999999
Q ss_pred ccccCCCCCcc------eeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhh
Q 002149 763 LVKLAPDSERS------VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNI 836 (959)
Q Consensus 763 la~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~ 836 (959)
+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 236 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh
Confidence 99865443221 234467999999999999999999999999999999999999999875533222211111110
Q ss_pred hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCcccC
Q 002149 837 KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEYSG 908 (959)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~~ 908 (959)
.. ........ + .....+.+++.+|++.||++||++.+|++.|+.++++.....+.+.+|..
T Consensus 237 ~~-~~~~~~~~-~---------~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~ 297 (298)
T 1csn_A 237 KQ-STPLRELC-A---------GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNL 297 (298)
T ss_dssp HH-HSCHHHHT-T---------TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGGGC
T ss_pred cc-CccHHHHH-h---------hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCccccCC
Confidence 00 00011110 0 11236889999999999999999999999999999999988888888753
No 34
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=371.94 Aligned_cols=258 Identities=24% Similarity=0.383 Sum_probs=202.7
Q ss_pred HHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEE
Q 002149 608 NVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 686 (959)
.+.++|++.+.||+|+||.||+|.. .+|+.||||++...... ...+.+.+|+++++.++||||+++++++......++
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 4567899999999999999999975 57999999998765332 335668899999999999999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||++..
T Consensus 86 v~E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~ 157 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157 (347)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCccc
Confidence 99999999999998542 468999999999999999999999 8999999999999999999999999999986
Q ss_pred CCCCCcceeeccccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHH
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAVTGKI-TTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRA 845 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (959)
.............||+.|+|||++.+..+ +.++||||+||++|||++|..||......+..... .
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i------~-------- 223 (347)
T 3zgw_A 158 PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKI------M-------- 223 (347)
T ss_dssp --------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------H--------
T ss_pred ccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH------H--------
Confidence 55443334455689999999999988775 88999999999999999999999876543321110 0
Q ss_pred hcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 846 AIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
......+. .....+.+++.+||+.||++|||+.|+++ ++++..
T Consensus 224 --~~~~~~p~---~~s~~~~~li~~~L~~dP~~Rps~~eil~--hp~~~~ 266 (347)
T 3zgw_A 224 --RGKYDVPK---WLSPSSILLLQQMLQVDPKKRISMKNLLN--HPWIMQ 266 (347)
T ss_dssp --HTCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHT--CHHHHT
T ss_pred --cCCCCCCC---CCCHHHHHHHHHHcccCHhHCcCHHHHhc--Ccchhc
Confidence 00111111 11235678999999999999999999987 455543
No 35
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.2e-40 Score=365.23 Aligned_cols=265 Identities=24% Similarity=0.403 Sum_probs=215.3
Q ss_pred ecHHHHHHHhcC----------CcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCC
Q 002149 601 ISVQVLRNVTKN----------FASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHR 669 (959)
Q Consensus 601 ~~~~~~~~~~~~----------~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 669 (959)
++.++++.+++. |...+.||+|+||.||+|... +|+.||||++... .....+.+.+|+.+++.++||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 25 VTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLR--KQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT--TCCSHHHHHHHHHHHTTCCCT
T ss_pred CcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEecc--chhHHHHHHHHHHHHHhCCCC
Confidence 566676666653 667789999999999999876 7999999998754 233456788999999999999
Q ss_pred CceeEEEEEEeCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEE
Q 002149 670 HLVSLLGYSVAGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNIL 749 (959)
Q Consensus 670 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiL 749 (959)
||+++++++......++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIl 173 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSIL 173 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEE
Confidence 999999999999999999999999999998843 468999999999999999999999 89999999999999
Q ss_pred ECCCCcEEEeeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 002149 750 LGDDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYL 829 (959)
Q Consensus 750 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~ 829 (959)
++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+...
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~- 251 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK- 251 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-
T ss_pred ECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-
Confidence 99999999999999986644322 2345679999999999999999999999999999999999999998765433211
Q ss_pred HHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 830 AAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
.+.....+... ........+.+++.+||+.||++||++.++++ ++++..
T Consensus 252 ------------~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~--hp~~~~ 300 (321)
T 2c30_A 252 ------------RLRDSPPPKLK---NSHKVSPVLRDFLERMLVRDPQERATAQELLD--HPFLLQ 300 (321)
T ss_dssp ------------HHHHSSCCCCT---TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT--SGGGGG
T ss_pred ------------HHhcCCCCCcC---ccccCCHHHHHHHHHHccCChhhCcCHHHHhc--Chhhcc
Confidence 11111111111 11122346789999999999999999999987 455543
No 36
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=367.94 Aligned_cols=262 Identities=25% Similarity=0.405 Sum_probs=212.9
Q ss_pred hcCCcccCcccccCceEEEEEEEc----CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD----DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 685 (959)
.++|++.+.||+|+||.||+|... .+..||||++... ......+.+.+|+++++.++||||+++++++.++...+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 357889999999999999999874 3456999999764 34556678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+||||+++|+|.+++... ...+++.+++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 127 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTH----DGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp EEEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEeeCCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 999999999999998542 2569999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCcc--eeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 766 LAPDSERS--VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 766 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
........ ......+|+.|+|||++.+..++.++|||||||++|||++ |..||......+.....
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~------------ 267 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV------------ 267 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH------------
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH------------
Confidence 66543222 2223456788999999999999999999999999999999 99999876654321111
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
..... ..........+.+++.+||+.||++||++.++++.|+.+++...
T Consensus 268 -~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 268 -EEGYR-----LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp -HTTCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred -HcCCC-----CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 00000 01111223468899999999999999999999999999987543
No 37
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.3e-40 Score=384.60 Aligned_cols=304 Identities=22% Similarity=0.302 Sum_probs=220.4
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC------c
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG------Y 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 682 (959)
.++|+..+.||+|+||.||+|.. .+++.||||++..........+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 57899999999999999999965 4689999999987655667778899999999999999999999998654 4
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..++||||+++ ++.+.+. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 141 ~~~lv~E~~~~-~l~~~~~-------~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred eEEEEEeCCCC-CHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEE
Confidence 67999999954 5666652 348999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhc----
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKS---- 838 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~---- 838 (959)
+|+..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+....+ +.....
T Consensus 210 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i--~~~lg~p~~~ 285 (464)
T 3ttj_A 210 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV--IEQLGTPCPE 285 (464)
T ss_dssp CC-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHHHCSCCHH
T ss_pred eeeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHhcCCCCHH
Confidence 99865432 2234568999999999999999999999999999999999999999887654432221 111000
Q ss_pred ----chHHHHHhcCCcccCCCCCH-----------------HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 839 ----DKEKLRAAIDPILEVNDDTF-----------------ETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 839 ----~~~~~~~~~~~~~~~~~~~~-----------------~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
........+........... .....+.+|+.+||..||++|||++|+++ ++++..|.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~--Hp~~~~~~ 363 (464)
T 3ttj_A 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ--HPYINVWY 363 (464)
T ss_dssp HHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT--STTTGGGC
T ss_pred HHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc--Chhhhhcc
Confidence 01112222222111111111 11346889999999999999999999988 78888776
Q ss_pred CCCCCCCcc-cCcccCC-ChhhhHHHHHHhhCCCc
Q 002149 898 PLDDEPEEY-SGIDYSL-PLNQMVKDWQEAEGKDL 930 (959)
Q Consensus 898 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 930 (959)
.+.+.+... ...+... .....+++|++...++.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 398 (464)
T 3ttj_A 364 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 398 (464)
T ss_dssp CHHHHSCCC-----------CCCHHHHHHHHHHHH
T ss_pred CcccccCCCCccCCcchhhccCCHHHHHHHHHHHH
Confidence 544322111 1111111 12345667776655433
No 38
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.1e-41 Score=412.49 Aligned_cols=401 Identities=28% Similarity=0.354 Sum_probs=306.8
Q ss_pred hcCCChhhHHHHHHHHHhcCCCC-CCCCCCCCCCCCCCCCcceEecCCcEEEEEecCCccccc---CcccccCCCCCcEE
Q 002149 33 LSATDPGDIDILNQFRKNLENPE-LLQWPKSGDPCGPPCWKHVFCSNSRVTQIQVSSVGLKGT---LPQNLNQLSKLENI 108 (959)
Q Consensus 33 ~~~~~~~~~~~l~~~~~~~~~~~-~~~w~~~~~~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~---~~~~l~~l~~L~~L 108 (959)
++++.+.|++||++||+++.||. +.+|..+.|||. |.||+|+.++|+.|+|+++++.|. +|+.+.+|++|+.+
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~---w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCT---FDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGG---STTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcC---CcceEECCCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 34556789999999999998874 789987777776 999999989999999999999998 99999999999999
Q ss_pred eccCCcCCCCCCCccCCCCccEEecCCCCCCCCChh--hhcCCCCCcEEEccCcccCCCCCCCCCccc-cCccccCeecc
Q 002149 109 GLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPAD--FFDGLENLQVLALDSNNFNASKGWSFPKGL-QSSAQLTNLSC 185 (959)
Q Consensus 109 ~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l-~~l~~L~~L~l 185 (959)
+++.|.+...++.|.++++|++|+|++|.+++..+. .|+++++|++|+|++|.+.+ .+|..+ ..+++|++|++
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~----~~~~~~~~~l~~L~~L~L 158 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDF----PGKVSGGLKLNSLEVLDL 158 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEEC----CSSCCSCCCCTTCSEEEC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCC----cCCHHHhccCCCCCEEEC
Confidence 999998876666899999999999999999975555 79999999999999999986 455554 78999999999
Q ss_pred cccccCCCCChh---hcCCCCCCEEEecCCcCCCCCCcccccC-CcccccccccCCCCcccccccccCCcCCcEEEccCc
Q 002149 186 MSCNLAGQLPDF---LGNFASLQNLKLSGNNLTGPIPESFKGL-NLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGN 261 (959)
Q Consensus 186 ~~n~l~~~~p~~---l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N 261 (959)
++|++++..|.. +.++++|++|++++|++++..+. ..+ +++.|.+.++ .+.+.++.++++++|++|+|++|
T Consensus 159 s~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n---~l~~~~~~l~~l~~L~~L~Ls~n 233 (768)
T 3rgz_A 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSN---NFSTGIPFLGDCSALQHLDISGN 233 (768)
T ss_dssp CSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSS---CCCSCCCBCTTCCSCCEEECCSS
T ss_pred CCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCC---cCCCCCcccccCCCCCEEECcCC
Confidence 999999998877 88999999999999999987664 222 4555555554 44555555899999999999999
Q ss_pred cccccCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCcccc------cccccccCcccCCCCC
Q 002149 262 HFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSKA------YKYSYSSNAFCQPTEG 335 (959)
Q Consensus 262 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~~------~~~~~~~~~~~~~~~~ 335 (959)
++++.+|..|..+++|++|+|++|++++.+|.. ...+|+.|+|++|.++|.+|.... ..+.+++|.+.+..+.
T Consensus 234 ~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~ 312 (768)
T 3rgz_A 234 KLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 312 (768)
T ss_dssp CCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCG
T ss_pred cCCCcccHHHhcCCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccch
Confidence 999999999999999999999999999888776 333699999999999998887542 2234556655432111
Q ss_pred CCCchhhHHHHhhccCCCCCcccccccCCCCCCCccccc-ccCCCCcccEEECCCCcccccCCccccCcC-cCCEEeCcc
Q 002149 336 VPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGL-SCGTNSKLTVLNLPNFNLSGTLSPSVGNLD-SLTQIKLQS 413 (959)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~ 413 (959)
. ++. ++.+.......+......+. .++.+++|++|+|++|++.+.+|..+.+++ +|++|+|++
T Consensus 313 ~------------~~~---l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~ 377 (768)
T 3rgz_A 313 F------------FGS---CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSS 377 (768)
T ss_dssp G------------GGG---CTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCS
T ss_pred H------------Hhc---CCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccC
Confidence 1 111 11222222222222211222 255667777777777777777777777776 777777777
Q ss_pred cccccccCCCccC--CCCCCeEeCCCCccCCCCCC----CCCcceecccCCCCC
Q 002149 414 NNISGQIPTNWTN--LKSLTLLDLSQNNLSPPLPK----FSGAVKLSLDGNPLL 461 (959)
Q Consensus 414 N~l~g~~p~~l~~--l~~L~~L~Ls~N~l~~~~p~----~~~~~~~~l~~N~~~ 461 (959)
|+++|.+|..+.. +++|+.|+|++|++++.+|. +.++..+.+.+|.+.
T Consensus 378 N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 431 (768)
T 3rgz_A 378 NNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLS 431 (768)
T ss_dssp SEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEE
T ss_pred CCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCccc
Confidence 7777777777666 67777777777777766664 345566777777543
No 39
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7.9e-41 Score=359.42 Aligned_cols=257 Identities=28% Similarity=0.453 Sum_probs=214.0
Q ss_pred cCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEEe
Q 002149 611 KNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYEY 690 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 690 (959)
++|+..+.||+|+||.||+|...+++.||+|++...... .+++.+|++++++++||||+++++++.+....++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 578899999999999999999888999999999765332 35688999999999999999999999999999999999
Q ss_pred cCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCCC
Q 002149 691 MPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDS 770 (959)
Q Consensus 691 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~~ 770 (959)
+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 87 MEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHHh----cCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 999999999854 22568999999999999999999999 89999999999999999999999999999866543
Q ss_pred CcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCC
Q 002149 771 ERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDP 849 (959)
Q Consensus 771 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (959)
.........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+.... +......
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~-------------~~~~~~~ 226 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-------------ISTGFRL 226 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-------------HHTTCCC
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHH-------------HhcCccC
Confidence 3333334567889999999999999999999999999999999 9999987765432111 1111111
Q ss_pred cccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 850 ILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 850 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
.. .......+.+++.+|++.||++||++.+++++|+++.+.
T Consensus 227 ~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 227 YK-----PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CC-----CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11 111234678999999999999999999999999988763
No 40
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.9e-40 Score=356.22 Aligned_cols=258 Identities=29% Similarity=0.436 Sum_probs=214.5
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
.++|+..+.||+|+||.||+|+.+++..||||++..... ..+++.+|++++++++||||+++++++.+....++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC---cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 467899999999999999999998888999999976532 23568899999999999999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+++++|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 84 YISNGCLLNYLRSHG----KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred ccCCCcHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 999999999986532 468999999999999999999999 8999999999999999999999999999987655
Q ss_pred CCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
..........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+..... .....
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~-------------~~~~~ 223 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV-------------SQGHR 223 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-------------HTTCC
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH-------------HcCCC
Confidence 44433444567788999999999899999999999999999999 99999877654321111 00000
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
. .. . ......+.+++.+|++.||++|||+.++++.|+.+.++
T Consensus 224 ~-~~-~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 224 L-YR-P---HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp C-CC-C---TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred C-CC-C---CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 0 00 1 11123688999999999999999999999999888654
No 41
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.9e-40 Score=364.10 Aligned_cols=290 Identities=27% Similarity=0.508 Sum_probs=199.3
Q ss_pred CCChhhHHHHHHHHHhcCCCC-CCCCCCCCCCCCCCCCcceEecC----CcEEEEEecCCcccc--cCcccccCCCCCcE
Q 002149 35 ATDPGDIDILNQFRKNLENPE-LLQWPKSGDPCGPPCWKHVFCSN----SRVTQIQVSSVGLKG--TLPQNLNQLSKLEN 107 (959)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~-~~~w~~~~~~C~~~~w~gv~C~~----~~v~~l~l~~~~l~g--~~~~~l~~l~~L~~ 107 (959)
.|.+.|++||++||+++.++. +.+|..+.++|.. -|.||.|+. ++|+.|+|++++++| .+|+.+.++++|++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~-~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNR-TWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTT-CSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcC-CCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 588999999999999998874 7789776777742 299999985 689999999999999 89999999999999
Q ss_pred EeccC-CcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecc
Q 002149 108 IGLQK-NQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSC 185 (959)
Q Consensus 108 L~Ls~-N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l 185 (959)
|+|++ |.+.+.+| .|.++++|++|+|++|+|++..+..|.++++|++|+|++|.+++
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--------------------- 139 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSG--------------------- 139 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEES---------------------
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCC---------------------
Confidence 99995 99988777 68888889999999888886666668888888888888887764
Q ss_pred cccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCc-CCcEEEccCcccc
Q 002149 186 MSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMD-QLRTLWLHGNHFS 264 (959)
Q Consensus 186 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~-~L~~L~L~~N~l~ 264 (959)
.+|..+..+++|++|+|++|++++.+|..+ ..++ +|++|+|++|+++
T Consensus 140 -------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-------------------------~~l~~~L~~L~L~~N~l~ 187 (313)
T 1ogq_A 140 -------TLPPSISSLPNLVGITFDGNRISGAIPDSY-------------------------GSFSKLFTSMTISRNRLT 187 (313)
T ss_dssp -------CCCGGGGGCTTCCEEECCSSCCEEECCGGG-------------------------GCCCTTCCEEECCSSEEE
T ss_pred -------cCChHHhcCCCCCeEECcCCcccCcCCHHH-------------------------hhhhhcCcEEECcCCeee
Confidence 344445555555555555555555555442 2333 5555566666555
Q ss_pred ccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhH
Q 002149 265 GTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVM 343 (959)
Q Consensus 265 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (959)
+.+|..|..++ |++|+|++|++++.+|..+..+ +|+.|+|++|.+++.+|.
T Consensus 188 ~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--------------------------- 239 (313)
T 1ogq_A 188 GKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK--------------------------- 239 (313)
T ss_dssp EECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG---------------------------
T ss_pred ccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc---------------------------
Confidence 55555555554 6666666666655555444443 244444444444332221
Q ss_pred HHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCC
Q 002149 344 ALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTN 423 (959)
Q Consensus 344 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 423 (959)
+..+++|++|+|++|++++.+|..+.++++|++|+|++|+++|.+|..
T Consensus 240 --------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 240 --------------------------------VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp --------------------------------CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred --------------------------------ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 112356666777777776666666767777777777777777666654
Q ss_pred ccCCCCCCeEeCCCCc
Q 002149 424 WTNLKSLTLLDLSQNN 439 (959)
Q Consensus 424 l~~l~~L~~L~Ls~N~ 439 (959)
.++++|+.|++++|+
T Consensus 288 -~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNK 302 (313)
T ss_dssp -TTGGGSCGGGTCSSS
T ss_pred -ccccccChHHhcCCC
Confidence 556666665555544
No 42
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.8e-40 Score=359.00 Aligned_cols=285 Identities=39% Similarity=0.653 Sum_probs=229.8
Q ss_pred eeecHHHHHHHhcCCccc------CcccccCceEEEEEEEcCCcEEEEEEccccc--ccHHHHHHHHHHHHHHHhcCCCC
Q 002149 599 LVISVQVLRNVTKNFASE------NELGRGGFGVVYKGELDDGTKIAVKRMEAGV--ISKKAVDEFHSEIAVLSKVRHRH 670 (959)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~------~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~n 670 (959)
..++..++..++++|... +.||+|+||.||+|.. +++.||||++.... ......+.+.+|+.+++.++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 457889999999998877 8999999999999986 58899999986542 22345678999999999999999
Q ss_pred ceeEEEEEEeCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE
Q 002149 671 LVSLLGYSVAGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL 750 (959)
Q Consensus 671 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl 750 (959)
|+++++++.+....++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ ++|+||||||+||++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEE
Confidence 9999999999999999999999999999986532 23569999999999999999999999 899999999999999
Q ss_pred CCCCcEEEeeccccccCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 002149 751 GDDFRAKVSDFGLVKLAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYL 829 (959)
Q Consensus 751 ~~~~~~ki~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~ 829 (959)
+.++.+||+|||+++....... .......||+.|+|||.+.+ .++.++||||||+++|||++|+.||.........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-- 243 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL-- 243 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT--
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH--
Confidence 9999999999999986544322 22334679999999998764 5889999999999999999999999865432211
Q ss_pred HHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 830 AAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
..+..........+...+++.+ ..........+.+++.+||+.||.+||++.++++.|+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSC--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHhhhhhhhhhhhccccc--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1111111111223444444433 23455667789999999999999999999999999988743
No 43
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=6.1e-41 Score=378.30 Aligned_cols=261 Identities=26% Similarity=0.391 Sum_probs=213.9
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|...+.||+|+||.||+|.+. +++.||||++... ......+.+.+|++++++++||||+++++++......++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 357888999999999999999876 7899999998754 34455667899999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 192 e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp ECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 9999999999986422 468999999999999999999999 899999999999999999999999999998654
Q ss_pred CCCccee-eccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 769 DSERSVV-TRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 769 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
....... ....+++.|+|||++.+..++.++|||||||++|||++ |..||......+..... . ..
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~---~----------~~ 331 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV---E----------KG 331 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHH---H----------TT
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---H----------cC
Confidence 3221111 12235778999999999999999999999999999998 99999877654321111 0 00
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
..+..+. ..+..+.+++.+||+.||++|||+.++++.|+.+.+++
T Consensus 332 --~~~~~~~---~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 332 --GRLPCPE---LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp --CCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --CCCCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 0111111 12346789999999999999999999999999987654
No 44
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-40 Score=371.34 Aligned_cols=306 Identities=23% Similarity=0.352 Sum_probs=224.8
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc------
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY------ 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 682 (959)
.++|+..+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46899999999999999999976 47899999999766556666788999999999999999999999987653
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..++||||+ +++|.+++.. ..+++..+..++.||++||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeee
Confidence 459999999 8999998854 468999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchH
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKE 841 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 841 (959)
+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+....+. ........
T Consensus 174 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~--~~~g~~~~ 247 (367)
T 1cm8_A 174 LARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM--KVTGTPPA 247 (367)
T ss_dssp TCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HHHCCCCH
T ss_pred cccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--HhcCCCCH
Confidence 99865432 344678999999999887 679999999999999999999999998876544322211 11111001
Q ss_pred HH---------HHhcCCcccCCC-----CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCccc
Q 002149 842 KL---------RAAIDPILEVND-----DTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEYS 907 (959)
Q Consensus 842 ~~---------~~~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~ 907 (959)
.. ...+........ ........+.+++.+||..||++|||+.++++ +++++.+...++++...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~--hp~f~~~~~~~~~~~~~- 324 (367)
T 1cm8_A 248 EFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA--HPYFESLHDTEDEPQVQ- 324 (367)
T ss_dssp HHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGGTTTC------CCC-
T ss_pred HHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc--ChHHHhhcCCccCCCCC-
Confidence 11 111100000000 00112346789999999999999999999987 78888887776665443
Q ss_pred CcccCCC-hhhhHHHHHHhhCCCcceee
Q 002149 908 GIDYSLP-LNQMVKDWQEAEGKDLSYVS 934 (959)
Q Consensus 908 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 934 (959)
.++.+.. .....++|++...++...+.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (367)
T 1cm8_A 325 KYDDSFDDVDRTLDEWKRVTYKEVLSFK 352 (367)
T ss_dssp CCCCC-----CCHHHHHHHHHHHHHTCC
T ss_pred CCCCChhhhcCCHHHHHHHHHHHHHHhc
Confidence 2333322 25567889988877776655
No 45
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.3e-40 Score=360.54 Aligned_cols=266 Identities=22% Similarity=0.354 Sum_probs=210.0
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEccccc-ccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGV-ISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ......+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 46899999999999999999975 468999999986532 2345567899999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++|+|.+++... .++++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 9999999999998542 468999999999999999999999 89999999999999999999999999999866
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
............||+.|+|||.+.+..++.++|||||||++|||++|+.||.+....+... ..+ ..........+
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~--~~~---~~~~~~~~~~~ 236 (294)
T 4eqm_A 162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI--KHI---QDSVPNVTTDV 236 (294)
T ss_dssp -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH--HHH---SSCCCCHHHHS
T ss_pred ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHh---hccCCCcchhc
Confidence 5443333445679999999999999999999999999999999999999998876533211 000 00000011111
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCC-CHHHHHHHHHHhHhhcC
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRP-DMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~ev~~~L~~~~~~~~ 897 (959)
. ...+..+.+++.+|++.||++|| +++++.+.|..++....
T Consensus 237 ~---------~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 237 R---------KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp C---------TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred c---------cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 1 11234688999999999999999 88888888877765443
No 46
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.2e-40 Score=358.76 Aligned_cols=258 Identities=27% Similarity=0.420 Sum_probs=212.0
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
.++|+..+.||+|+||.||+|...+++.||||++...... .+++.+|+++++.++||||+++++++.+....++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 4578899999999999999999998889999999865332 3568899999999999999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+++|+|.+++... ...+++.+++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 100 YMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp CCTTCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred ccCCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999998542 2468999999999999999999999 8999999999999999999999999999986654
Q ss_pred CCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
..........+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+.... +.....
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~-------------~~~~~~ 239 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-------------IAQGLR 239 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-------------HHTTCC
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH-------------HhcccC
Confidence 33222334467889999999999999999999999999999998 9999987765432111 111111
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
.... ......+.+++.+||+.||++||++.++++.|..++++
T Consensus 240 ~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 240 LYRP-----HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp CCCC-----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCC-----CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 1111 11124688999999999999999999999999998865
No 47
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.5e-40 Score=373.93 Aligned_cols=261 Identities=25% Similarity=0.427 Sum_probs=203.3
Q ss_pred hcCCcccCcccccCceEEEEEEEc----CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD----DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 685 (959)
.++|...+.||+|+||.||+|... ++..||||+++... .....+.+.+|+.++++++||||+++++++.+....+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 357899999999999999999764 56789999997642 4556678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+||||+++|+|.+++... ...+++.+++.++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 123 lv~e~~~~~sL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKH----DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp EEEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred EEEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 999999999999999542 2568999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCcce--eeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 766 LAPDSERSV--VTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 766 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
......... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i------------ 263 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV------------ 263 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHH------------
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH------------
Confidence 664432211 122345778999999999999999999999999999998 99999876653321111
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
..... . .........+.+++.+||+.||++||++.+|++.|+.+++..
T Consensus 264 -~~~~~--~---~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 264 -DEGYR--L---PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -HTTEE--C---CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -HcCCC--C---CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 00000 0 111123346889999999999999999999999999998754
No 48
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.3e-40 Score=371.24 Aligned_cols=308 Identities=23% Similarity=0.352 Sum_probs=220.3
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC------c
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG------Y 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 682 (959)
.++|+..+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 47899999999999999999965 5789999999977655666778899999999999999999999998754 5
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..++|+|++ +++|.+++.. ..+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred eEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecc
Confidence 679999999 8999888743 568999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhc---
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKS--- 838 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 838 (959)
+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+........
T Consensus 178 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~ 253 (367)
T 2fst_X 178 LARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253 (367)
T ss_dssp -----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred cccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 99865432 334679999999999887 6789999999999999999999999988765443222211110000
Q ss_pred ----chHHHHHhcCCcccCCCCCHH-----HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCcccCc
Q 002149 839 ----DKEKLRAAIDPILEVNDDTFE-----TFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEYSGI 909 (959)
Q Consensus 839 ----~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~~~ 909 (959)
........+............ ....+.+|+.+||..||++|||+.++++ ++++..+..+++++... .+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~--hp~~~~~~~~~~~~~~~-~~ 330 (367)
T 2fst_X 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA--HAYFAQYHDPDDEPVAD-PY 330 (367)
T ss_dssp HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGTTTCCGGGCCCCC-CC
T ss_pred HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc--ChhhhhccCCCCCCCCC-CC
Confidence 001111111111111111111 1235789999999999999999999987 78888887777665443 33
Q ss_pred ccCCC-hhhhHHHHHHhhCCCcceee
Q 002149 910 DYSLP-LNQMVKDWQEAEGKDLSYVS 934 (959)
Q Consensus 910 ~~~~~-~~~~~~~~~~~~~~~~~~~~ 934 (959)
+.+.. .....++|++..+++...+.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~e~~~~~ 356 (367)
T 2fst_X 331 DQSLESRDLLIDEWKSLTYDEVISFV 356 (367)
T ss_dssp CGGGSSCCCCHHHHHHHHHHHHHHCC
T ss_pred CcchhhccCCHHHHHHHHHHHHHHhc
Confidence 33322 24567889988887777655
No 49
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=6.7e-40 Score=358.90 Aligned_cols=264 Identities=27% Similarity=0.459 Sum_probs=208.1
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
.++|...+.||+|+||.||+|... ..+|+|+++.........+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 357889999999999999999764 46999998876556667788999999999999999999999865 456789999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+++|+|.+++.. ....+++.+++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 112 ~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 112 WCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred cCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 9999999999853 23679999999999999999999999 8999999999999999999999999999985433
Q ss_pred -CCcceeeccccccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHH
Q 002149 770 -SERSVVTRLAGTFGYLAPEYAV---TGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRA 845 (959)
Q Consensus 770 -~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (959)
..........||+.|+|||++. +..++.++|||||||++|||++|+.||......+..... +. ..
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--~~---------~~ 253 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM--VG---------RG 253 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH--HH---------HT
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHH--Hh---------cC
Confidence 1222334467999999999986 567889999999999999999999999876554322111 00 00
Q ss_pred hcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 846 AIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
...+.+ ..........+.+++.+|++.||++||++.++++.|+.+...+
T Consensus 254 ~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 254 YASPDL--SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CCCCCS--TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CCCcch--hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 111111 1111122346889999999999999999999999999876554
No 50
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.3e-40 Score=359.47 Aligned_cols=276 Identities=24% Similarity=0.336 Sum_probs=207.9
Q ss_pred HhcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
+.++|++.+.||+|+||.||+|...+|+.||||++..........+.+.+|+++++.++||||+++++++.+....++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 45789999999999999999999888999999999765444445577889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||++ |+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 99 e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 99 EFME-KDLKKVLDE----NKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp ECCS-EEHHHHHHT----CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred cCCC-CCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 9996 688887743 22568999999999999999999999 899999999999999999999999999998664
Q ss_pred CCCcceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcch-----HH
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDK-----EK 842 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~ 842 (959)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+............... ..
T Consensus 171 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 171 IPVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp SCCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTT
T ss_pred CCcc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhc
Confidence 3322 2344578999999999876 568999999999999999999999998766544322111110000000 00
Q ss_pred HHHhcCCcccC-CCCCHH-----HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 843 LRAAIDPILEV-NDDTFE-----TFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 843 ~~~~~~~~~~~-~~~~~~-----~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
+.......... ...... ...++.+++.+||+.||++|||+.|+++ +++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~f~~ 306 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN--HPYFKD 306 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT--SGGGTT
T ss_pred cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc--Cccccc
Confidence 00000000000 001111 1236779999999999999999999987 455543
No 51
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.3e-40 Score=363.01 Aligned_cols=273 Identities=26% Similarity=0.408 Sum_probs=208.6
Q ss_pred hcCCcccCcccccCceEEEEEEE-----cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC--c
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-----DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG--Y 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 682 (959)
.++|+..+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 46789999999999999999974 36889999998754 456667899999999999999999999998654 4
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred ceEEEEEeCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCc
Confidence 5799999999999999996532 458999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCc--ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcch
Q 002149 763 LVKLAPDSER--SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDK 840 (959)
Q Consensus 763 la~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 840 (959)
+++....... .......+|..|+|||++.+..++.++||||||+++|||++|..|+......... .........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~----~~~~~~~~~ 235 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR----MIGNDKQGQ 235 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHH----HHCTTCCTH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHh----hhcCccccc
Confidence 9986644322 1223345788899999999999999999999999999999999998754321110 000000000
Q ss_pred ---HHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 841 ---EKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 841 ---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
....+.+..... ..........+.+++.+||+.||++|||+.++++.|+.+.+..
T Consensus 236 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 236 MIVFHLIELLKNNGR-LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hhHHHHHHHHhccCc-CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 011111111111 1111123357889999999999999999999999999987754
No 52
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6e-40 Score=380.67 Aligned_cols=314 Identities=21% Similarity=0.262 Sum_probs=214.2
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC-----ce
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG-----YE 683 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 683 (959)
.++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+++++.++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999654 789999999977655666778899999999999999999999998543 56
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccc
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGL 763 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGl 763 (959)
.|+||||+ +|+|.+++.. ...+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+
T Consensus 132 ~~lv~e~~-~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp EEEEECCC-SEEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecc-ccchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeeccccc
Confidence 89999998 6899888843 2569999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCc--------------------------ceeecccccccccccccc-ccCCCCccchHHHHHHHHHHHHh---
Q 002149 764 VKLAPDSER--------------------------SVVTRLAGTFGYLAPEYA-VTGKITTKVDVFSFGVVLMELLT--- 813 (959)
Q Consensus 764 a~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlG~ll~ellt--- 813 (959)
|+....... ...+..+||+.|+|||++ ....++.++|||||||++|||++
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~ 282 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTST
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcc
Confidence 986542211 123456889999999986 45679999999999999999999
Q ss_pred --------CCCCCCCCChH------------------HHHHHHHHHHhhhcch---------HHHHHhcCCcccCCCC--
Q 002149 814 --------GLMALDESRPE------------------ERQYLAAWFWNIKSDK---------EKLRAAIDPILEVNDD-- 856 (959)
Q Consensus 814 --------g~~p~~~~~~~------------------~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-- 856 (959)
|+.+|.+.... ....+...+....... ......+.........
T Consensus 283 ~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (458)
T 3rp9_A 283 ENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDL 362 (458)
T ss_dssp TTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCG
T ss_pred ccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCH
Confidence 66666554310 0111111110000000 0111111111100000
Q ss_pred ---CHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCcccCcccCCC--hhhhHHHHHHhhCCCcc
Q 002149 857 ---TFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEYSGIDYSLP--LNQMVKDWQEAEGKDLS 931 (959)
Q Consensus 857 ---~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 931 (959)
.......+.+|+.+||..||++|||++|+++ +++++.+....+++........+.. .....+++++...+++.
T Consensus 363 ~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~--Hp~f~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 440 (458)
T 3rp9_A 363 AERFPASSADAIHLLKRMLVFNPNKRITINECLA--HPFFKEVRIAEVETNATEKVRLPFNDWMNMDEPQLRYAFVKEIQ 440 (458)
T ss_dssp GGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGGTTTCCGGGCCCCSSCCCCSSCTTSCCCHHHHHHHHHHHHT
T ss_pred HHHCCCCCHHHHHHHHHHhccCccccCCHHHHhc--CHhhhhcCCCccCCCCCCCCCCCccccccCCHHHHHHHHHHHHH
Confidence 0111346789999999999999999999988 8899887766655544332222211 23345566666666665
Q ss_pred eee
Q 002149 932 YVS 934 (959)
Q Consensus 932 ~~~ 934 (959)
.+.
T Consensus 441 ~~~ 443 (458)
T 3rp9_A 441 RYH 443 (458)
T ss_dssp TTC
T ss_pred HhC
Confidence 555
No 53
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.4e-39 Score=363.29 Aligned_cols=253 Identities=23% Similarity=0.329 Sum_probs=207.3
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccH----HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCce
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISK----KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE 683 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 683 (959)
+.++|.+.+.||+|+||.||+|... +|+.||||++....... ...+.+.+|+.+++.++||||+++++++.+...
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 4578999999999999999999765 68999999997653322 134678999999999999999999999999999
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC----cEEEe
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF----RAKVS 759 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~----~~ki~ 759 (959)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++ .+||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~ 161 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEE
Confidence 9999999999999999843 2568999999999999999999999 8999999999999998776 79999
Q ss_pred eccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD 839 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 839 (959)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+....+.... + ..
T Consensus 162 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~---i---~~- 232 (361)
T 2yab_A 162 DFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN---I---TA- 232 (361)
T ss_dssp CCSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH---H---HT-
T ss_pred ecCCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---H---Hh-
Confidence 999998765432 23456799999999999999999999999999999999999999987655432111 0 00
Q ss_pred hHHHHHhcCCcccCCCC-CHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 840 KEKLRAAIDPILEVNDD-TFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 840 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
........ .......+.+++.+||..||++|||+.|+++
T Consensus 233 ---------~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 233 ---------VSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ---------TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---------cCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000000 0011235789999999999999999999976
No 54
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=370.06 Aligned_cols=265 Identities=25% Similarity=0.382 Sum_probs=213.6
Q ss_pred hcCCcccCcccccCceEEEEEEEc------CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCce
Q 002149 610 TKNFASENELGRGGFGVVYKGELD------DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE 683 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 683 (959)
.++|+..+.||+|+||.||+|.+. +++.||||++... ........+.+|+.+++.++||||+++++++.....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 467899999999999999999843 4678999998754 345566778999999999999999999999999999
Q ss_pred EEEEEEecCCCchhhHHhhcccC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC---cEEE
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSL--NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF---RAKV 758 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~---~~ki 758 (959)
.++||||+++|+|.+++...+.. ....+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEE
Confidence 99999999999999999764321 22458999999999999999999999 8999999999999999554 5999
Q ss_pred eeccccccCCCC-CcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhh
Q 002149 759 SDFGLVKLAPDS-ERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNI 836 (959)
Q Consensus 759 ~DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 836 (959)
+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||++ |..||......+..... .
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i---~-- 300 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV---T-- 300 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH---H--
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---H--
Confidence 999999743211 1122234568999999999999999999999999999999998 99999877654321111 0
Q ss_pred hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 837 KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
... ... ........+.+++.+||+.||++||++.+|++.|+.+.+..
T Consensus 301 --------~~~--~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 301 --------SGG--RMD---PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp --------TTC--CCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred --------cCC--CCC---CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 000 000 11122346889999999999999999999999999887654
No 55
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=367.99 Aligned_cols=269 Identities=29% Similarity=0.377 Sum_probs=219.1
Q ss_pred hcCCcccCcccccCceEEEEEEEc--------CCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEe
Q 002149 610 TKNFASENELGRGGFGVVYKGELD--------DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVA 680 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 680 (959)
.++|.+.+.||+|+||.||+|... .+..||||++... ......+.+.+|+++++.+ +||||+++++++..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 467899999999999999999752 2357999998765 3455667899999999999 89999999999999
Q ss_pred CceEEEEEEecCCCchhhHHhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEE
Q 002149 681 GYERLLVYEYMPQGALSKHIFHWKSL-----------NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNIL 749 (959)
Q Consensus 681 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiL 749 (959)
....++||||+++|+|.+++...... ....+++.+++.++.||+.||+|||+ .+|+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEE
Confidence 99999999999999999999764321 12469999999999999999999999 89999999999999
Q ss_pred ECCCCcEEEeeccccccCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 002149 750 LGDDFRAKVSDFGLVKLAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQ 827 (959)
Q Consensus 750 l~~~~~~ki~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~ 827 (959)
++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||......+..
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~ 303 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999986544322 22334567899999999999999999999999999999999 99999877654321
Q ss_pred HHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCC
Q 002149 828 YLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLD 900 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~ 900 (959)
... ........ .......+.+++.+||+.||++||++.++++.|++++......+
T Consensus 304 ~~~-------------~~~~~~~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~ 358 (382)
T 3tt0_A 304 KLL-------------KEGHRMDK-----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 358 (382)
T ss_dssp HHH-------------HTTCCCCC-----CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred HHH-------------HcCCCCCC-----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence 111 01000000 11123468899999999999999999999999999987765433
No 56
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=8e-40 Score=366.41 Aligned_cols=256 Identities=25% Similarity=0.353 Sum_probs=210.5
Q ss_pred HHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEE
Q 002149 608 NVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 686 (959)
.+.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+.+|+++++.++||||+++++++.+....++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34568999999999999999999764 68999999998766666677889999999999999999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC---CcEEEeeccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDD---FRAKVSDFGL 763 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~---~~~ki~DfGl 763 (959)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+
T Consensus 106 v~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EECCCCSCBHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 9999999999998843 2568999999999999999999999 899999999999999865 4599999999
Q ss_pred cccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHH
Q 002149 764 VKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKL 843 (959)
Q Consensus 764 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (959)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... +..
T Consensus 178 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~---i~~-------- 244 (362)
T 2bdw_A 178 AIEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ---IKA-------- 244 (362)
T ss_dssp CBCCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHH--------
T ss_pred ceEecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHH---HHh--------
Confidence 98665432 23446899999999999999999999999999999999999999987654332111 100
Q ss_pred HHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 002149 844 RAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNV 888 (959)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 888 (959)
...+. . ..........+.+++.+||+.||++||++.+++++
T Consensus 245 -~~~~~--~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 245 -GAYDY--P-SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -TCCCC--C-TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -CCCCC--C-cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 0 00001123467899999999999999999999873
No 57
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.3e-39 Score=355.26 Aligned_cols=278 Identities=21% Similarity=0.260 Sum_probs=215.6
Q ss_pred HHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEE-EeCceEE
Q 002149 608 NVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYS-VAGYERL 685 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~ 685 (959)
.+.++|+..+.||+|+||.||+|.. .+++.||||++... ...+.+.+|+++++.++|++++..+.++ ......+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK----TKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccc----ccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 4467899999999999999999975 57899999986543 2234578899999999988877766655 6777889
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCcEEEeecc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL---GDDFRAKVSDFG 762 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl---~~~~~~ki~DfG 762 (959)
+||||+ +++|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EEEECC-CCBHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred EEEEcc-CCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 999999 99999998542 2569999999999999999999999 899999999999999 788999999999
Q ss_pred ccccCCCCCc------ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhh
Q 002149 763 LVKLAPDSER------SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNI 836 (959)
Q Consensus 763 la~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~ 836 (959)
+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+...
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T 4hgt_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 233 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH
T ss_pred cceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc
Confidence 9986544322 1223467999999999999999999999999999999999999999875433211111100000
Q ss_pred hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCcccC
Q 002149 837 KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEYSG 908 (959)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~~ 908 (959)
.. .... ..+.. .....+.+++.+|++.||++||++.++++.|+.++++.....+.+.+|+.
T Consensus 234 ~~-~~~~-~~~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~~ 294 (296)
T 4hgt_A 234 KM-STPI-EVLCK---------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 294 (296)
T ss_dssp HH-HSCH-HHHTT---------TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGGG
T ss_pred cc-cchh-hhhhc---------cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchhh
Confidence 00 0000 00000 01236889999999999999999999999999999999998888888864
No 58
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=7.5e-40 Score=375.09 Aligned_cols=256 Identities=22% Similarity=0.278 Sum_probs=209.9
Q ss_pred HHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEE
Q 002149 608 NVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 686 (959)
.+.++|++.+.||+|+||.||+|.. .+|+.||+|++..........+.+.+|+++++.++||||+++++++.+....++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 4467899999999999999999965 478999999998776666677889999999999999999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC---CCCcEEEeeccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLG---DDFRAKVSDFGL 763 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~---~~~~~ki~DfGl 763 (959)
||||+++|+|.+.+... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++ .++.+||+|||+
T Consensus 88 v~E~~~gg~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EECCCBCCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 99999999999988542 568999999999999999999999 8999999999999998 467899999999
Q ss_pred cccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHH
Q 002149 764 VKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKL 843 (959)
Q Consensus 764 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (959)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|..||.+....+..... .
T Consensus 160 a~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i---~--------- 226 (444)
T 3soa_A 160 AIEVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI---K--------- 226 (444)
T ss_dssp CBCCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---H---------
T ss_pred eEEecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHH---H---------
Confidence 986654332 234568999999999999999999999999999999999999999876543321111 0
Q ss_pred HHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 844 RAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
....+... .........+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 227 AGAYDFPS---PEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HTCCCCCT---TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hCCCCCCc---cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000 000112346789999999999999999999987
No 59
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.2e-40 Score=381.73 Aligned_cols=259 Identities=26% Similarity=0.416 Sum_probs=212.5
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
.++|...+.||+|+||.||+|.+++++.||||+++... ...+.+.+|++++++++||||+++++++. ....++|||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 46788899999999999999999888999999997642 23567999999999999999999999986 567899999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+++|+|.+++.... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 263 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp CCTTCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred ecCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 999999999996432 1357899999999999999999999 8999999999999999999999999999987644
Q ss_pred CCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
..........+|+.|+|||++....++.++|||||||++|||++ |+.||.+....+..... ....
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-------------~~~~- 402 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-------------ERGY- 402 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-------------HHTC-
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------HcCC-
Confidence 32222233456789999999999999999999999999999999 99999877654321111 1111
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
.+... ......+.+++.+||+.||++|||+.+|++.|+.+....
T Consensus 403 -~~~~~---~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 403 -RMPRP---ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp -CCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred -CCCCC---CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 11111 122346889999999999999999999999998876543
No 60
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6e-40 Score=366.03 Aligned_cols=268 Identities=28% Similarity=0.442 Sum_probs=215.0
Q ss_pred HHhcCCcccCcccccCceEEEEEEEc------CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC
Q 002149 608 NVTKNFASENELGRGGFGVVYKGELD------DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG 681 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 681 (959)
...++|+..+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++.+.
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 34578999999999999999999764 34889999997642 455567899999999999999999999999999
Q ss_pred ceEEEEEEecCCCchhhHHhhcccC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 002149 682 YERLLVYEYMPQGALSKHIFHWKSL-------------------NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRD 742 (959)
Q Consensus 682 ~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 742 (959)
...++||||+++|+|.+++...... ....+++.+++.++.||++||+|||+ ++|+|||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~D 199 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRD 199 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCC
Confidence 9999999999999999999763211 12579999999999999999999999 8999999
Q ss_pred CCCCCEEECCCCcEEEeeccccccCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCC
Q 002149 743 LKSSNILLGDDFRAKVSDFGLVKLAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDE 820 (959)
Q Consensus 743 ik~~NiLl~~~~~~ki~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~ 820 (959)
|||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 999999999999999999999985433221 22234568999999999999999999999999999999999 9999987
Q ss_pred CChHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 821 SRPEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
....+..... . +.... .........+.+++.+||+.||++||++.++++.|+++.+++.
T Consensus 280 ~~~~~~~~~~---~-------------~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 280 MAHEEVIYYV---R-------------DGNIL--ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp SCHHHHHHHH---H-------------TTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred CChHHHHHHH---h-------------CCCcC--CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 6654321110 0 00000 0111223468899999999999999999999999999877654
No 61
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=358.86 Aligned_cols=258 Identities=19% Similarity=0.271 Sum_probs=210.6
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
+.++|.+.+.||+|+||.||+|... +++.||+|.+... ......+.+|+++++.++||||+++++++.+....++|
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 4578999999999999999999765 6889999998743 34456788999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC--CCcEEEeeccccc
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD--DFRAKVSDFGLVK 765 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~--~~~~ki~DfGla~ 765 (959)
|||+++|+|.+++.. ....+++.++..++.||+.||+|||+ ++|+||||||+|||++. ++.+||+|||+++
T Consensus 80 ~e~~~g~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~ 152 (321)
T 1tki_A 80 FEFISGLDIFERINT----SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152 (321)
T ss_dssp ECCCCCCBHHHHHTS----SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred EEeCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCe
Confidence 999999999999843 22468999999999999999999999 89999999999999987 7899999999998
Q ss_pred cCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHH
Q 002149 766 LAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRA 845 (959)
Q Consensus 766 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (959)
...... ......||+.|+|||++.+..++.++|||||||++|||++|..||......+..... ...........
T Consensus 153 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i--~~~~~~~~~~~-- 226 (321)
T 1tki_A 153 QLKPGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI--MNAEYTFDEEA-- 226 (321)
T ss_dssp ECCTTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH--HHTCCCCCHHH--
T ss_pred ECCCCC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH--HcCCCCCChhh--
Confidence 765432 234467999999999999988999999999999999999999999876653321111 00000000000
Q ss_pred hcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 846 AIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
. . .....+.+++.+||..||++|||+.|+++ ++++.+
T Consensus 227 -~------~----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~--hp~~~~ 263 (321)
T 1tki_A 227 -F------K----EISIEAMDFVDRLLVKERKSRMTASEALQ--HPWLKQ 263 (321)
T ss_dssp -H------T----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH--SHHHHS
T ss_pred -h------c----cCCHHHHHHHHHHcCCChhHCcCHHHHhc--Chhhcc
Confidence 0 0 11236789999999999999999999988 566654
No 62
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.5e-40 Score=376.58 Aligned_cols=319 Identities=22% Similarity=0.251 Sum_probs=229.6
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC-----c
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG-----Y 682 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 682 (959)
+.++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+++++.++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 3568999999999999999999754 688999999987655666778899999999999999999999998766 5
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..++||||+ +|+|.+++.. ...+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 104 ELYIVLEIA-DSDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CEEEEEECC-SEEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecC-CcCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCC
Confidence 789999999 5799998843 2568999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCc---------------------ceeecccccccccccccc-ccCCCCccchHHHHHHHHHHHHhCCCCC--
Q 002149 763 LVKLAPDSER---------------------SVVTRLAGTFGYLAPEYA-VTGKITTKVDVFSFGVVLMELLTGLMAL-- 818 (959)
Q Consensus 763 la~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlG~ll~elltg~~p~-- 818 (959)
+|+....... ...+..+||+.|+|||++ ....++.++|||||||++|||++|..||
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 9986543221 123567899999999986 5567999999999999999999854443
Q ss_pred ---------CCCCh---------------HHHHHHHHHHHhhhcc---------hHHHHHhcCCcccCCCCCH-----HH
Q 002149 819 ---------DESRP---------------EERQYLAAWFWNIKSD---------KEKLRAAIDPILEVNDDTF-----ET 860 (959)
Q Consensus 819 ---------~~~~~---------------~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~-----~~ 860 (959)
.+... .....+...+...... .......+........... ..
T Consensus 255 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (432)
T 3n9x_A 255 DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSI 334 (432)
T ss_dssp SGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTS
T ss_pred ccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCC
Confidence 33210 0011111111111000 0111111111111111111 12
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCcccCcccCCC--hhhhHHHHHHhhCCCcceeecccc
Q 002149 861 FWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEYSGIDYSLP--LNQMVKDWQEAEGKDLSYVSLEDS 938 (959)
Q Consensus 861 ~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 938 (959)
...+.+|+.+||+.||++|||++|+++ +++++......+++........++. .....+++++...+++..+..+..
T Consensus 335 s~~~~dLl~~mL~~dP~~R~ta~e~L~--Hp~f~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 412 (432)
T 3n9x_A 335 SDDGINLLESMLKFNPNKRITIDQALD--HPYLKDVRKKKLENFSTKKIILPFDDWMVLSETQLRYIFLKEVQSFHPELV 412 (432)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHT--CGGGTTTCCTTTC---CCCCCCSSCTTCCCCHHHHHHHHHHHHHHHCTTCC
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhc--ChhhhhccCcccCcCCCCCCCCChhhcccCCHHHHHHHHHHHHHHhCcccc
Confidence 346789999999999999999999988 7899888777766644333322222 245667788888887777764433
No 63
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.4e-39 Score=354.23 Aligned_cols=275 Identities=20% Similarity=0.283 Sum_probs=207.9
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
++|+..+.||+|+||.||+|... +++.||||++..........+.+.+|++++++++||||+++++++.++...++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999999764 68999999998765555566788999999999999999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|++ |++.+.+.. ....+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~-~~l~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCD-QDLKKYFDS----CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCS-EEHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCC-CCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 996 566666543 12569999999999999999999999 8999999999999999999999999999986643
Q ss_pred CCcceeeccccccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVTGK-ITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
... ......||+.|+|||++.+.. ++.++|||||||++|||++|..|+........ .+.................+.
T Consensus 154 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 154 PVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp CCS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH-HHHHHHHHHCCCCTTTCTTGG
T ss_pred ccc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhhhhhc
Confidence 322 234457899999999998766 79999999999999999999888644333221 111111111100000000000
Q ss_pred Cc------------ccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 849 PI------------LEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 849 ~~------------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
.. .............+.+++.+||+.||++|||++|+++ ++++..+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~f~~~~ 290 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ--HPYFSDFC 290 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGTTC-
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc--CcccccCC
Confidence 00 0000001122346789999999999999999999987 56665443
No 64
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.3e-39 Score=360.18 Aligned_cols=249 Identities=27% Similarity=0.332 Sum_probs=206.1
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
++|+..+.||+|+||.||+|+.. +|+.||+|++.+... .....+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57899999999999999999765 689999999875422 2234567889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 85 E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 85 EYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp ECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 999999999988542 468999999999999999999999 899999999999999999999999999998543
Q ss_pred CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+..... ..
T Consensus 157 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i------~~---------- 219 (337)
T 1o6l_A 157 SDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI------LM---------- 219 (337)
T ss_dssp CTT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HH----------
T ss_pred cCC-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHH------Hc----------
Confidence 322 2234568999999999999999999999999999999999999999876543321110 00
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHH
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRP-----DMGHAVN 887 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 887 (959)
.....+ ......+.+++.+||+.||++|| +++++++
T Consensus 220 ~~~~~p---~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 220 EEIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CCCCCC---TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCCCC---CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 011111 11223678999999999999999 8999877
No 65
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.8e-39 Score=354.12 Aligned_cols=277 Identities=21% Similarity=0.258 Sum_probs=218.6
Q ss_pred HhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEE-EeCceEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYS-VAGYERLL 686 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l 686 (959)
+.++|+..+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+.+++.++|++++..+.++ ..+...++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 357899999999999999999975 5789999999865422 23578999999999988877666554 66778899
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCcEEEeeccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL---GDDFRAKVSDFGL 763 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl---~~~~~~ki~DfGl 763 (959)
||||+ +++|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+||++ +.++.+||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 154 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCC
Confidence 99999 99999998542 2569999999999999999999999 899999999999999 4788999999999
Q ss_pred cccCCCCCcc------eeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhh
Q 002149 764 VKLAPDSERS------VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIK 837 (959)
Q Consensus 764 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 837 (959)
++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.......+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 234 (296)
T 3uzp_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 234 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccc
Confidence 9865443321 1244679999999999999999999999999999999999999998754322111111010000
Q ss_pred cchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCcccC
Q 002149 838 SDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEYSG 908 (959)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~~ 908 (959)
. .... ..+.. .....+.+++.+||+.||++||++.++++.|+.++.+.....+.+.+|+.
T Consensus 235 ~-~~~~-~~~~~---------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw~~ 294 (296)
T 3uzp_A 235 M-STPI-EVLCK---------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 294 (296)
T ss_dssp H-HSCH-HHHTT---------TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGGGG
T ss_pred c-CCch-HHHHh---------hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcccccccccc
Confidence 0 0000 00000 11236889999999999999999999999999999999998888888864
No 66
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.5e-40 Score=405.02 Aligned_cols=108 Identities=31% Similarity=0.464 Sum_probs=93.0
Q ss_pred cccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCC
Q 002149 358 LVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQ 437 (959)
Q Consensus 358 l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~ 437 (959)
+.......+.....++..++.+++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+.++++|++||||+
T Consensus 634 L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~ 713 (768)
T 3rgz_A 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713 (768)
T ss_dssp CCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCS
T ss_pred ccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcC
Confidence 33334445555556666788899999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCC---CCCcceecccCCCCCCCCC
Q 002149 438 NNLSPPLPK---FSGAVKLSLDGNPLLNGKS 465 (959)
Q Consensus 438 N~l~~~~p~---~~~~~~~~l~~N~~~c~~~ 465 (959)
|+|+|.+|. +..+...++.|||.+||.+
T Consensus 714 N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 714 NNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp SEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred CcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 999999996 4455677899999999965
No 67
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.1e-39 Score=352.77 Aligned_cols=260 Identities=23% Similarity=0.329 Sum_probs=200.6
Q ss_pred hcCCcccCcccccCceEEEEEEEcC----CcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDD----GTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 685 (959)
.++|+..+.||+|+||.||+|.... +..||+|++... ......+.+.+|+.+++.++||||+++++++. .+..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 4678999999999999999997642 457999998754 24555678999999999999999999999974 55788
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp EEEECCTTEEHHHHHHHT----TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred EEEecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECcccccc
Confidence 999999999999998542 2468999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHH
Q 002149 766 LAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLR 844 (959)
Q Consensus 766 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (959)
..............+|+.|+|||++.+..++.++|||||||++|||++ |..||......+..... .
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i---~---------- 231 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI---E---------- 231 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH---H----------
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHH---H----------
Confidence 665443333334567889999999998999999999999999999997 99999876654321110 0
Q ss_pred HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 845 AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
... ... ........+.+++.+|++.||++||++.++++.|+.++++.
T Consensus 232 ~~~--~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 232 NGE--RLP---MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp TTC--CCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCC--CCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 000 000 11122346889999999999999999999999999988653
No 68
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-39 Score=359.33 Aligned_cols=265 Identities=28% Similarity=0.389 Sum_probs=216.7
Q ss_pred hcCCcccCcccccCceEEEEEEE------cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCce
Q 002149 610 TKNFASENELGRGGFGVVYKGEL------DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE 683 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 683 (959)
.++|.+.+.||+|+||.||+|.. .+++.||||++... ......+.+.+|+++++.++||||+++++++.+...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 46789999999999999999975 24578999998754 345566789999999999999999999999999999
Q ss_pred EEEEEEecCCCchhhHHhhcccC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSL-------------------NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLK 744 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik 744 (959)
.++||||+++|+|.+++...... ....+++.+++.++.||+.||+|||+ ++|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccc
Confidence 99999999999999999764321 12458999999999999999999999 899999999
Q ss_pred CCCEEECCCCcEEEeeccccccCCCCCcc-eeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCC
Q 002149 745 SSNILLGDDFRAKVSDFGLVKLAPDSERS-VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESR 822 (959)
Q Consensus 745 ~~NiLl~~~~~~ki~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~ 822 (959)
|+||+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999866443322 2233467889999999999999999999999999999999 999998776
Q ss_pred hHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 823 PEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
..+..... ...... .........+.+++.+||+.||++||++.++++.|+.++.+.
T Consensus 258 ~~~~~~~~-------------~~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 313 (314)
T 2ivs_A 258 PERLFNLL-------------KTGHRM-----ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313 (314)
T ss_dssp GGGHHHHH-------------HTTCCC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHh-------------hcCCcC-----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhhc
Confidence 54321111 000000 011122346889999999999999999999999999988754
No 69
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=8.3e-40 Score=357.68 Aligned_cols=260 Identities=23% Similarity=0.369 Sum_probs=202.1
Q ss_pred HhcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHh--cCCCCceeEEEEEEeC----c
Q 002149 609 VTKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSK--VRHRHLVSLLGYSVAG----Y 682 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~ 682 (959)
+.++|+..+.||+|+||.||+|.. +++.||||++... ..+.+.+|.+++.. ++||||+++++++... .
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 457899999999999999999987 5899999998643 33456677777777 7899999999987643 4
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCCEEECCCC
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLH--------SLAHQSFIHRDLKSSNILLGDDF 754 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dik~~NiLl~~~~ 754 (959)
..++||||+++|+|.+++.. ..+++..++.++.||+.||+||| + ++|+||||||+|||++.++
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~ 150 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNG 150 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTS
T ss_pred eeEEehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCC
Confidence 57899999999999999843 46899999999999999999999 6 8999999999999999999
Q ss_pred cEEEeeccccccCCCCCcce---eeccccccccccccccccC------CCCccchHHHHHHHHHHHHhC----------C
Q 002149 755 RAKVSDFGLVKLAPDSERSV---VTRLAGTFGYLAPEYAVTG------KITTKVDVFSFGVVLMELLTG----------L 815 (959)
Q Consensus 755 ~~ki~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlG~ll~elltg----------~ 815 (959)
.+||+|||+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +
T Consensus 151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~ 230 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230 (301)
T ss_dssp CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence 99999999998554433221 2335799999999999876 456799999999999999999 7
Q ss_pred CCCCCCChHHHH--HHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 002149 816 MALDESRPEERQ--YLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPL 892 (959)
Q Consensus 816 ~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 892 (959)
.||......... .....+ ......+..............+.+++.+||+.||++|||+.+|++.|+++
T Consensus 231 ~pf~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 231 PPFYDVVPNDPSFEDMRKVV---------CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CTTTTTSCSSCCHHHHHHHH---------TTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccccCCCCcchhhhhHHH---------hccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 888654332111 000000 00000111111112234567899999999999999999999999998864
No 70
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.1e-40 Score=370.81 Aligned_cols=273 Identities=26% Similarity=0.353 Sum_probs=216.2
Q ss_pred HHHHHHHhcCCcccCcccccCceEEEEEEE------cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEE
Q 002149 603 VQVLRNVTKNFASENELGRGGFGVVYKGEL------DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLL 675 (959)
Q Consensus 603 ~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 675 (959)
....+...++|++.+.||+|+||.||+|.+ .+++.||||++... ......+.+.+|++++.++ +||||++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 334444567899999999999999999963 24678999999764 3445567899999999999 799999999
Q ss_pred EEEEeCc-eEEEEEEecCCCchhhHHhhcccCC-----------------------------------------------
Q 002149 676 GYSVAGY-ERLLVYEYMPQGALSKHIFHWKSLN----------------------------------------------- 707 (959)
Q Consensus 676 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~----------------------------------------------- 707 (959)
+++.+.. ..++||||+++|+|.+++.......
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 9988754 4899999999999999997643210
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCCCC-c
Q 002149 708 --------------LEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDSE-R 772 (959)
Q Consensus 708 --------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~~~-~ 772 (959)
...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 1228999999999999999999999 899999999999999999999999999998654332 2
Q ss_pred ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCCcc
Q 002149 773 SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDPIL 851 (959)
Q Consensus 773 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (959)
.......||+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+... . .+........
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~--~----------~~~~~~~~~~ 317 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC--R----------RLKEGTRMRA 317 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH--H----------HHHHTCCCCC
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHH--H----------HHHcCCCCCC
Confidence 23345678999999999999999999999999999999998 999998765433211 0 0111101111
Q ss_pred cCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 852 EVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 852 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
. ......+.+++.+||+.||++||++.+++++|+.+++..
T Consensus 318 --~---~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 318 --P---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp --C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --C---CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 1 112236789999999999999999999999999988653
No 71
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-40 Score=367.25 Aligned_cols=277 Identities=14% Similarity=0.218 Sum_probs=218.3
Q ss_pred hcCCcccCcccccCceEEEEEEEcC---------CcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCcee-------
Q 002149 610 TKNFASENELGRGGFGVVYKGELDD---------GTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVS------- 673 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------- 673 (959)
.++|++.+.||+|+||.||+|.... ++.||||++... +.+.+|+++++.++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 3579999999999999999997653 789999998743 35789999999999999988
Q ss_pred --------EEEEEEe-CceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 002149 674 --------LLGYSVA-GYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLK 744 (959)
Q Consensus 674 --------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik 744 (959)
+++++.. +...++||||+ +++|.+++.... ...+++.+++.++.||+.||+|||+ ++|+|||||
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dik 186 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVT 186 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCC
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCC
Confidence 6777776 67889999999 999999996532 2579999999999999999999999 899999999
Q ss_pred CCCEEECCCC--cEEEeeccccccCCCCCcc------eeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCC
Q 002149 745 SSNILLGDDF--RAKVSDFGLVKLAPDSERS------VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLM 816 (959)
Q Consensus 745 ~~NiLl~~~~--~~ki~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~ 816 (959)
|+||+++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 266 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999998 8999999999865432211 1234579999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 817 ALDESRPEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 817 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
||.......... .... .......................+.+++.+||+.||++||++.++++.|+.++++.
T Consensus 267 pf~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 267 PWTNCLPNTEDI-MKQK-------QKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp TTGGGTTCHHHH-HHHH-------HHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CcccCCcCHHHH-HHHH-------HhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 998764222111 1111 11111111111100000011246889999999999999999999999999999999
Q ss_pred CCCCCCCCcccC
Q 002149 897 KPLDDEPEEYSG 908 (959)
Q Consensus 897 ~~~~~~~~~~~~ 908 (959)
....+++.+|+.
T Consensus 339 ~~~~~~~~dw~~ 350 (352)
T 2jii_A 339 RVSPYDPIGLPM 350 (352)
T ss_dssp TCCTTSCCCCCC
T ss_pred CCCcCccccCcC
Confidence 988888888763
No 72
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=7.9e-40 Score=377.95 Aligned_cols=261 Identities=30% Similarity=0.472 Sum_probs=207.8
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
.++|+..+.||+|+||.||+|.++.+..||||+++.... ..+.+.+|++++++++||||+++++++.+ ...++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 456888999999999999999998888899999986432 24578999999999999999999999876 67899999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+++|+|.+++.... ...+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 259 ~~~~gsL~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 259 YMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp CCTTCBHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred hhcCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 999999999996422 2458999999999999999999999 8999999999999999999999999999986654
Q ss_pred CCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
..........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+..... ....
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-------------~~~~- 398 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-------------ERGY- 398 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-------------HTTC-
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------HcCC-
Confidence 33222334457889999999999999999999999999999999 99999877654321111 0000
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
.+. ........+.+++.+||+.||++|||++++++.|+.++....+
T Consensus 399 -~~~---~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 399 -RMP---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp -CCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred -CCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 111 1112234688999999999999999999999999988765443
No 73
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.5e-39 Score=363.08 Aligned_cols=262 Identities=21% Similarity=0.298 Sum_probs=207.1
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEccccccc---HHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVIS---KKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 685 (959)
.++|++.+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+.+++.++||||+++++++.+....+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46799999999999999999976 46899999998643211 113567899999999999999999999999999999
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCc---EEEeecc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFR---AKVSDFG 762 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~---~ki~DfG 762 (959)
+||||+++|+|.+++..... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++. +||+|||
T Consensus 103 lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 99999999999888765332 22468999999999999999999999 89999999999999986554 9999999
Q ss_pred ccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..............
T Consensus 179 ~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~i~~~~~~~~~~ 254 (351)
T 3c0i_A 179 VAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL---FEGIIKGKYKMNPR 254 (351)
T ss_dssp TCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHH---HHHHHHTCCCCCHH
T ss_pred ceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHH---HHHHHcCCCCCCcc
Confidence 9987654322 2344679999999999999999999999999999999999999998743211 11100000000000
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
.. . .....+.+++.+||+.||++||++.++++ ++++.
T Consensus 255 ~~---------~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~--hp~~~ 291 (351)
T 3c0i_A 255 QW---------S----HISESAKDLVRRMLMLDPAERITVYEALN--HPWLK 291 (351)
T ss_dssp HH---------T----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SHHHH
T ss_pred cc---------c----cCCHHHHHHHHHHCCCChhHCcCHHHHhc--Chhhc
Confidence 00 0 11236789999999999999999999987 45554
No 74
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=360.70 Aligned_cols=268 Identities=27% Similarity=0.411 Sum_probs=199.3
Q ss_pred hcCCcccCcccccCceEEEEEEEcC-Cc---EEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceE-
Q 002149 610 TKNFASENELGRGGFGVVYKGELDD-GT---KIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYER- 684 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~-~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 684 (959)
.++|++.+.||+|+||.||+|.... ++ .||||++..........+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 4679999999999999999997553 32 799999987655556678899999999999999999999999877655
Q ss_pred -----EEEEEecCCCchhhHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEE
Q 002149 685 -----LLVYEYMPQGALSKHIFHWKSL-NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKV 758 (959)
Q Consensus 685 -----~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki 758 (959)
++||||+++|+|.+++...... ....+++.+++.++.|++.||+|||+ ++|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEEE
Confidence 8999999999999998653321 22368999999999999999999999 89999999999999999999999
Q ss_pred eeccccccCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhh
Q 002149 759 SDFGLVKLAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNI 836 (959)
Q Consensus 759 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 836 (959)
+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......+.....
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~------ 252 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL------ 252 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH------
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHH------
Confidence 99999986543322 12233457889999999999999999999999999999999 99999876654321110
Q ss_pred hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 837 KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
..... ..........+.+++.+||+.||++||++.++++.|++++.....
T Consensus 253 ----------~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 253 ----------IGGNR--LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp ----------HTTCC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred ----------hcCCC--CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 00000 011112234688999999999999999999999999999886443
No 75
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.6e-40 Score=376.20 Aligned_cols=270 Identities=19% Similarity=0.251 Sum_probs=215.6
Q ss_pred cHHHHHHHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEccccccc-HHHHHHHHHHHHHHHhcCCCCceeEEEEEE
Q 002149 602 SVQVLRNVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVIS-KKAVDEFHSEIAVLSKVRHRHLVSLLGYSV 679 (959)
Q Consensus 602 ~~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 679 (959)
.+.+++...++|+..++||+|+||.||+|+.. +++.||||++.+.... ....+.+.+|+.++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34455566789999999999999999999875 5789999998753211 112234789999999999999999999999
Q ss_pred eCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEe
Q 002149 680 AGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVS 759 (959)
Q Consensus 680 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~ 759 (959)
+....++||||+++|+|.+++... ...+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~ 217 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLA 217 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEc
Confidence 999999999999999999999542 2569999999999999999999999 899999999999999999999999
Q ss_pred eccccccCCCCCcceeeccccccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHH
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAV-----TGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFW 834 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~ 834 (959)
|||+|+.............+||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+
T Consensus 218 DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i---- 293 (437)
T 4aw2_A 218 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI---- 293 (437)
T ss_dssp CCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH----
T ss_pred chhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhh----
Confidence 99999876555444445578999999999997 567899999999999999999999999877654432111
Q ss_pred hhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHHHHHhHh
Q 002149 835 NIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQ--RPDMGHAVNVLAPLVE 894 (959)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~ev~~~L~~~~~ 894 (959)
..... . +. .+.........+.+++.+|+..+|++ ||+++|+++ +++++
T Consensus 294 --~~~~~---~-~~----~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~--Hpff~ 343 (437)
T 4aw2_A 294 --MNHKE---R-FQ----FPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK--HPFFS 343 (437)
T ss_dssp --HTHHH---H-CC----CCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT--SGGGT
T ss_pred --hhccc---c-cc----CCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC--CCccC
Confidence 00000 0 00 01110112236789999999998888 999999977 66665
No 76
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8.4e-40 Score=360.73 Aligned_cols=259 Identities=24% Similarity=0.357 Sum_probs=205.2
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++.++...++||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccc-ccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 468999999999999999999765 78999999986542 2233467889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++.. ...+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 85 e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 85 EYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp ECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EcCCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 99999999998843 2568999999999999999999999 899999999999999999999999999998553
Q ss_pred CCC-cceeeccccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 769 DSE-RSVVTRLAGTFGYLAPEYAVTGKI-TTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 769 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
... ........||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......... ..+.... ..
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-~~~~~~~--------~~ 227 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDWKEKK--------TY 227 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH-HHHHTTC--------TT
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH-HHHhccc--------cc
Confidence 222 222345689999999999988775 778999999999999999999998765432211 1111000 00
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
..+ .......+.+++.+||+.||++|||+.|+++ ++++.+
T Consensus 228 ~~~-------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~--h~~~~~ 267 (323)
T 3tki_A 228 LNP-------WKKIDSAPLALLHKILVENPSARITIPDIKK--DRWYNK 267 (323)
T ss_dssp STT-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT--CTTTTC
T ss_pred CCc-------cccCCHHHHHHHHHHccCChhhCcCHHHHhh--Chhhcc
Confidence 000 0112236779999999999999999999977 444443
No 77
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=9.5e-40 Score=354.72 Aligned_cols=266 Identities=23% Similarity=0.333 Sum_probs=202.8
Q ss_pred cCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEEe
Q 002149 611 KNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYEY 690 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 690 (959)
++|+..+.||+|+||.||+|...+|+.||||++..........+.+.+|+++++.++||||+++++++......++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 47899999999999999999888899999999876543333456788999999999999999999999999999999999
Q ss_pred cCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCCC
Q 002149 691 MPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDS 770 (959)
Q Consensus 691 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~~ 770 (959)
++ ++|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 82 LD-QDLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp CS-EEHHHHHHTS----TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred cC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 95 5998888542 2568999999999999999999999 89999999999999999999999999999865432
Q ss_pred Ccceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcch-HH---HH-
Q 002149 771 ERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDK-EK---LR- 844 (959)
Q Consensus 771 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~---~~- 844 (959)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+..... ........ .. ..
T Consensus 154 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 154 VR-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI--FRILGTPNSKNWPNVTE 230 (288)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHHHCCCCTTTSTTGGG
T ss_pred cc-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHHHCCCChhhchhhhc
Confidence 21 2334578999999999976 45899999999999999999999999887654432111 11100000 00 00
Q ss_pred -HhcCCcccC------CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 845 -AAIDPILEV------NDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 845 -~~~~~~~~~------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
...++.... ..........+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000100000 0000112346789999999999999999999977
No 78
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.3e-40 Score=372.75 Aligned_cols=266 Identities=21% Similarity=0.241 Sum_probs=212.7
Q ss_pred HHHHHHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC
Q 002149 604 QVLRNVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG 681 (959)
Q Consensus 604 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 681 (959)
++++...++|+..+.||+|+||.||+|+.. +++.||+|++.+... .....+.+.+|+.+++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344455678999999999999999999765 688999999865321 112234478999999999999999999999999
Q ss_pred ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeec
Q 002149 682 YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDF 761 (959)
Q Consensus 682 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~Df 761 (959)
...++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+ ++||||||||+|||++.++.+||+||
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEecc
Confidence 999999999999999998854 358999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCcceeeccccccccccccccccCC----CCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhh
Q 002149 762 GLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGK----ITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIK 837 (959)
Q Consensus 762 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 837 (959)
|+|+.............+||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+....+ .
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i------~ 286 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI------M 286 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH------H
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHH------H
Confidence 999876554433445678999999999997765 889999999999999999999999877654321111 1
Q ss_pred cchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHHHHHhHhh
Q 002149 838 SDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQ--RPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~ev~~~L~~~~~~ 895 (959)
.... . +. .+ . .......+.+++.+||..+|.+ ||+++||++ +++++.
T Consensus 287 ~~~~---~-~~--~p--~-~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~--Hp~f~~ 335 (410)
T 3v8s_A 287 NHKN---S-LT--FP--D-DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR--HLFFKN 335 (410)
T ss_dssp THHH---H-CC--CC--T-TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT--SGGGCC
T ss_pred hccc---c-cc--CC--C-cccccHHHHHHHHHHccChhhhCCCCCHHHHhc--CccccC
Confidence 1000 0 00 00 0 0011236789999999999998 999999987 566653
No 79
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.7e-40 Score=383.16 Aligned_cols=257 Identities=28% Similarity=0.437 Sum_probs=212.5
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
..+|...+.||+|+||.||+|.+. +++.||||++.... ...+.|.+|++++++++||||+++++++......++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 356888899999999999999876 48899999997642 23567999999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 296 E~~~~g~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 296 EFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp ECCTTCBHHHHHHHS---CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EccCCCCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 999999999999652 23568999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
...........+|+.|+|||++.+..++.++|||||||++|||++ |..||.+....+.... +....
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~-------------~~~~~ 436 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-------------LEKDY 436 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-------------HHTTC
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH-------------HHcCC
Confidence 433222333456789999999999999999999999999999999 9999987765432111 11111
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhH
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLV 893 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 893 (959)
.+. ........+.+++.+||+.||++||++.++++.|+.++
T Consensus 437 --~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 437 --RME---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp --CCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred --CCC---CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 111 11122346889999999999999999999999998765
No 80
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=355.75 Aligned_cols=251 Identities=26% Similarity=0.402 Sum_probs=197.6
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccH------------------------HHHHHHHHHHHHHH
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISK------------------------KAVDEFHSEIAVLS 664 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~------------------------~~~~~~~~E~~~l~ 664 (959)
.++|++.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 35799999999999999999975 468899999987543211 12356889999999
Q ss_pred hcCCCCceeEEEEEEe--CceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 002149 665 KVRHRHLVSLLGYSVA--GYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRD 742 (959)
Q Consensus 665 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 742 (959)
.++||||+++++++.+ ....++||||+++|+|.+++. ...+++.++..++.||+.||+|||+ ++|+|||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~D 162 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRD 162 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccC
Confidence 9999999999999987 568899999999999987642 2579999999999999999999999 8999999
Q ss_pred CCCCCEEECCCCcEEEeeccccccCCCCCcceeeccccccccccccccccCC---CCccchHHHHHHHHHHHHhCCCCCC
Q 002149 743 LKSSNILLGDDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGK---ITTKVDVFSFGVVLMELLTGLMALD 819 (959)
Q Consensus 743 ik~~NiLl~~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~ll~elltg~~p~~ 819 (959)
|||+|||++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 241 (298)
T 2zv2_A 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241 (298)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 999999999999999999999986654322 234467999999999997765 4778999999999999999999998
Q ss_pred CCChHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 820 ESRPEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
.......... +... ..... ........+.+++.+||+.||++||++.|+++
T Consensus 242 ~~~~~~~~~~-------------~~~~---~~~~~-~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 242 DERIMCLHSK-------------IKSQ---ALEFP-DQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp CSSHHHHHHH-------------HHHC---CCCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CccHHHHHHH-------------Hhcc---cCCCC-CccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 7654321110 0000 00000 01112346889999999999999999999976
No 81
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.2e-39 Score=360.65 Aligned_cols=258 Identities=27% Similarity=0.401 Sum_probs=202.4
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcE----EEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTK----IAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 685 (959)
++|+..+.||+|+||.||+|.+. +++. ||+|.+... ......+.+.+|+.++++++||||+++++++..+. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 57899999999999999999754 4443 588877643 23345678999999999999999999999998765 78
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+|+||+++|+|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 93 ~v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCTTCBHHHHHHHS----TTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCccee
Confidence 999999999999998652 2568999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHH
Q 002149 766 LAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKL 843 (959)
Q Consensus 766 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (959)
....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||......+......
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~------------ 233 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE------------ 233 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH------------
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHH------------
Confidence 6543322 22233567889999999999999999999999999999999 999998776544221110
Q ss_pred HHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 844 RAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
... .. .........+.+++.+||+.||++||++.++++.|..+.+.
T Consensus 234 -~~~--~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 234 -KGE--RL---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -TTC--CC---CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -cCC--CC---CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 000 00 01112234688999999999999999999999999988653
No 82
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.3e-39 Score=352.50 Aligned_cols=278 Identities=21% Similarity=0.303 Sum_probs=209.1
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|+..+.||+|+||.||+|... +|+.||||++..........+.+.+|++++++++||||+++++++.+....++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 368999999999999999999765 5899999998776555566778899999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++++|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 82 e~~~~~~l~~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 82 EYCDHTVLHELDRY-----QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp ECCSEEHHHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCchHHHHHhh-----hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 99999999888743 2568999999999999999999999 899999999999999999999999999998665
Q ss_pred CCCcceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcch-HHH---
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDK-EKL--- 843 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 843 (959)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+............... ...
T Consensus 154 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (311)
T 4agu_A 154 GPSD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST 232 (311)
T ss_dssp -------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHT
T ss_pred Cccc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccc
Confidence 3322 2334578999999999976 678999999999999999999999998877655433222111100000 000
Q ss_pred HHhcCCc-ccCC--CCC-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 844 RAAIDPI-LEVN--DDT-----FETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 844 ~~~~~~~-~~~~--~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
....... .... ... ......+.+++.+||+.||++|||++|+++ +++++....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~f~~~~~ 293 (311)
T 4agu_A 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH--HPYFENIRE 293 (311)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT--SGGGTTCC-
T ss_pred ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc--ChHHHhccC
Confidence 0000000 0000 000 112335789999999999999999999987 566655443
No 83
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=355.43 Aligned_cols=254 Identities=22% Similarity=0.322 Sum_probs=206.7
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccH----HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCce
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISK----KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE 683 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 683 (959)
+.++|...+.||+|+||.||+|... +|+.||||++....... ...+.+.+|+.+++.++||||+++++++.+...
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3457999999999999999999765 68999999987653221 135678999999999999999999999999999
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC----cEEEe
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF----RAKVS 759 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~----~~ki~ 759 (959)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 89 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 160 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160 (326)
T ss_dssp EEEEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred EEEEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence 9999999999999999843 2568999999999999999999999 8999999999999999877 89999
Q ss_pred eccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD 839 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 839 (959)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+...... ......
T Consensus 161 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~--~~~~~~ 236 (326)
T 2y0a_A 161 DFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS--AVNYEF 236 (326)
T ss_dssp CCTTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH--HTCCCC
T ss_pred ECCCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH--hcCCCc
Confidence 999998664332 2344679999999999999999999999999999999999999998766543211110 000000
Q ss_pred hHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 840 KEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
.... . . .....+.+++.+||+.||++|||+.++++
T Consensus 237 ~~~~---~------~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 237 EDEY---F------S----NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CHHH---H------T----TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred Cccc---c------c----cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000 0 0 11235779999999999999999999987
No 84
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5.2e-39 Score=364.70 Aligned_cols=279 Identities=18% Similarity=0.247 Sum_probs=212.1
Q ss_pred hcCCcccCccccc--CceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEE
Q 002149 610 TKNFASENELGRG--GFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 610 ~~~~~~~~~lG~G--~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 686 (959)
.++|++.+.||+| +||.||+|... +|+.||||++..........+.+.+|+.+++.++|||||++++++.+....++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3578999999999 99999999765 78999999998776666777889999999999999999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||||+++|+|.+++... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||.+..
T Consensus 104 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEECCTTCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEccCCCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 99999999999998652 22568999999999999999999999 8999999999999999999999999999864
Q ss_pred CCCCCc------ceeecccccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhc
Q 002149 767 APDSER------SVVTRLAGTFGYLAPEYAVT--GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKS 838 (959)
Q Consensus 767 ~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 838 (959)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+..... ......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~--~~~~~~ 255 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK--LNGTVP 255 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH--hcCCCC
Confidence 322111 11223478999999999987 67999999999999999999999999876543321100 000000
Q ss_pred --------chH-------------HHHHhcCCc--------ccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 002149 839 --------DKE-------------KLRAAIDPI--------LEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVL 889 (959)
Q Consensus 839 --------~~~-------------~~~~~~~~~--------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 889 (959)
... .....+... .............+.+|+.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~-- 333 (389)
T 3gni_B 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN-- 333 (389)
T ss_dssp --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT--
T ss_pred ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc--
Confidence 000 000000000 0000011112346789999999999999999999987
Q ss_pred HHhHhhcCC
Q 002149 890 APLVEKWKP 898 (959)
Q Consensus 890 ~~~~~~~~~ 898 (959)
+++++....
T Consensus 334 hp~f~~~~~ 342 (389)
T 3gni_B 334 HSFFKQIKR 342 (389)
T ss_dssp SGGGGGC--
T ss_pred CHHHHHHhh
Confidence 567665543
No 85
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=362.70 Aligned_cols=255 Identities=24% Similarity=0.327 Sum_probs=204.3
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 686 (959)
.++|+..+.||+|+||.||+|+.. +|+.||||++.+... .....+.+.+|..+++.+ +||||+++++++.+....++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999765 689999999876422 223456688999999998 69999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.
T Consensus 102 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999998652 468999999999999999999999 8999999999999999999999999999985
Q ss_pred CCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i---------------- 236 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI---------------- 236 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----------------
T ss_pred cccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHH----------------
Confidence 43322 2234568999999999999989999999999999999999999999877654321111
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCH------HHHHHHHHHhHh
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDM------GHAVNVLAPLVE 894 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~ev~~~L~~~~~ 894 (959)
.......+. .....+.+++.+||+.||++||++ .++++ +++++
T Consensus 237 ~~~~~~~p~---~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~--hp~f~ 285 (353)
T 3txo_A 237 LNDEVVYPT---WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR--HPFFK 285 (353)
T ss_dssp HHCCCCCCT---TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT--SGGGT
T ss_pred HcCCCCCCC---CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh--CCccc
Confidence 111111111 122357899999999999999998 77765 45554
No 86
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-39 Score=349.40 Aligned_cols=257 Identities=28% Similarity=0.440 Sum_probs=213.0
Q ss_pred cCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEEe
Q 002149 611 KNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYEY 690 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 690 (959)
++|+..+.||+|+||.||+|...+++.||+|++...... .+.+.+|+++++.++||||+++++++.+....++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 578899999999999999999888899999999765332 35788999999999999999999999999999999999
Q ss_pred cCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCCC
Q 002149 691 MPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDS 770 (959)
Q Consensus 691 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~~ 770 (959)
+++++|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 85 MEHGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CTTCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHhhC----cccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999998642 2568999999999999999999999 89999999999999999999999999999866443
Q ss_pred CcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCC
Q 002149 771 ERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDP 849 (959)
Q Consensus 771 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (959)
.........+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+.... +......
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~-------------i~~~~~~ 224 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-------------ISTGFRL 224 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-------------HHTTCCC
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHH-------------HhcCCcC
Confidence 2222334567889999999998899999999999999999999 8999987654332110 0011111
Q ss_pred cccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 850 ILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 850 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
.. .......+.+++.+|++.||++||++.++++.|+.+.+.
T Consensus 225 ~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 225 YK-----PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CC-----CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 00 111234678999999999999999999999999988753
No 87
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.2e-39 Score=352.10 Aligned_cols=262 Identities=28% Similarity=0.500 Sum_probs=200.5
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
.++|++.+.||+|+||.||+|... ..||||++..........+.+.+|+++++.++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 457999999999999999999864 4699999987666667778899999999999999999999965 4556899999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 100 WCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp CCCEEEHHHHHTT----C---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred ecCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccc
Confidence 9999999999853 23568999999999999999999999 8999999999999999999999999999985543
Q ss_pred C-Ccceeeccccccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHH
Q 002149 770 S-ERSVVTRLAGTFGYLAPEYAV---TGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRA 845 (959)
Q Consensus 770 ~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (959)
. .........||+.|+|||++. +..++.++||||||+++|||++|+.||......+.. ...+.. .
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~~~~~---------~ 241 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI--IEMVGR---------G 241 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH--HHHHHH---------T
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH--HHHhcc---------c
Confidence 2 122334467999999999986 567888999999999999999999999876543321 111110 0
Q ss_pred hcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 846 AIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
...+.. ..........+.+++.+||+.||++||++.++++.|+++.+
T Consensus 242 ~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 242 SLSPDL--SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SCCCCT--TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ccCcch--hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 111111 11111233478899999999999999999999999988754
No 88
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.1e-39 Score=356.60 Aligned_cols=267 Identities=25% Similarity=0.389 Sum_probs=216.4
Q ss_pred hcCCcccCcccccCceEEEEEEE------cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCc
Q 002149 610 TKNFASENELGRGGFGVVYKGEL------DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGY 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 682 (959)
.++|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++++ +||||+++++++..+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 46789999999999999999975 356789999987642 344567899999999999 8999999999999999
Q ss_pred eEEEEEEecCCCchhhHHhhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEE
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSL-------------NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNIL 749 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiL 749 (959)
..++||||+++|+|.+++...... ....+++..++.++.||+.||+|||+ ++|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEE
Confidence 999999999999999999753311 12358999999999999999999999 89999999999999
Q ss_pred ECCCCcEEEeeccccccCCCCCcc-eeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 002149 750 LGDDFRAKVSDFGLVKLAPDSERS-VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQ 827 (959)
Q Consensus 750 l~~~~~~ki~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~ 827 (959)
++.++.+||+|||+++........ ......||+.|+|||++.+..++.++||||||+++|||++ |+.||.........
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 257 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence 999999999999999866543322 2334567889999999999999999999999999999999 99999876543321
Q ss_pred HHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 828 YLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
. . .......... .......+.+++.+|++.||.+||++.++++.|+.++.+..
T Consensus 258 ~--~----------~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 258 Y--K----------MIKEGFRMLS-----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp H--H----------HHHHTCCCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred H--H----------HhccCCCCCC-----cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 1 0 0111111111 11123468899999999999999999999999999887643
No 89
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.6e-39 Score=349.65 Aligned_cols=254 Identities=22% Similarity=0.330 Sum_probs=209.7
Q ss_pred cCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC--ceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG--YERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 688 (959)
++|+..+.||+|+||.||+|..+ ++.||||++..........+.+.+|+.++++++||||+++++++.+. ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57889999999999999999886 88999999987666667778899999999999999999999999877 7789999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQS--FIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||+++|+|.+++... ....+++..++.++.|++.||+|||+ ++ |+||||||+||+++.++.++|+|||++..
T Consensus 89 e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEG---TNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp ECCTTCBHHHHHHSC---SSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred cccCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999999999999642 22468999999999999999999999 67 99999999999999999999999998764
Q ss_pred CCCCCcceeeccccccccccccccccCCCCc---cchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHH
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAVTGKITT---KVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKL 843 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (959)
... ....||+.|+|||.+.+..++. ++|||||||++|||++|+.||......+..... .
T Consensus 163 ~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~------------~ 224 (271)
T 3kmu_A 163 FQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV------------A 224 (271)
T ss_dssp TSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH------------H
T ss_pred ecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH------------H
Confidence 322 2246899999999998765554 799999999999999999999877654321110 0
Q ss_pred HHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 844 RAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
.....+.. .......+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus 225 ~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 225 LEGLRPTI-----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HSCCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred hcCCCCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 01111111 11223468899999999999999999999999988754
No 90
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.9e-39 Score=352.54 Aligned_cols=273 Identities=20% Similarity=0.247 Sum_probs=210.8
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc--eEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY--ERLL 686 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 686 (959)
.++|.+.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+++++.++||||+++++++.... ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 357899999999999999999765 58999999987542 2233567789999999999999999999998765 7799
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE----CCCCcEEEeecc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL----GDDFRAKVSDFG 762 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl----~~~~~~ki~DfG 762 (959)
||||+++|+|.+++..... ...+++.+++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||
T Consensus 87 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEECCTTCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEeCCCCCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 9999999999999965322 2348999999999999999999999 899999999999999 788889999999
Q ss_pred ccccCCCCCcceeeccccccccccccccc--------cCCCCccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAV--------TGKITTKVDVFSFGVVLMELLTGLMALDESRPEE-RQYLAAWF 833 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~-~~~~~~~~ 833 (959)
+++....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||....... .......+
T Consensus 162 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 239 (319)
T 4euu_A 162 AARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (319)
T ss_dssp TCEECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHH
T ss_pred CceecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHH
Confidence 9987654332 23457999999999986 5788999999999999999999999997544322 11111111
Q ss_pred HhhhcchHHHH----------HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 002149 834 WNIKSDKEKLR----------AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAP 891 (959)
Q Consensus 834 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 891 (959)
..... ..... .+.................+.+++.+||+.||++||+++|++++...
T Consensus 240 ~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 240 ITGKP-SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp HHHCC-TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred hcCCC-cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 11000 00000 00001111123345666788899999999999999999999987764
No 91
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.7e-40 Score=370.48 Aligned_cols=270 Identities=21% Similarity=0.226 Sum_probs=213.9
Q ss_pred cHHHHHHHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEE
Q 002149 602 SVQVLRNVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSV 679 (959)
Q Consensus 602 ~~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 679 (959)
.+++.+...++|+..+.||+|+||.||+|+.+ +|+.||||++.+... .....+.+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34455556788999999999999999999774 789999999875321 1223345789999999999999999999999
Q ss_pred eCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEe
Q 002149 680 AGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVS 759 (959)
Q Consensus 680 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~ 759 (959)
+....++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+ ++||||||||+|||++.++.+||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEe
Confidence 9999999999999999999996532 468999999999999999999999 899999999999999999999999
Q ss_pred eccccccCCCCCcceeeccccccccccccccc-------cCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAV-------TGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAW 832 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~ 832 (959)
|||+++.............+||+.|+|||++. +..++.++|||||||++|||++|+.||......+....+
T Consensus 205 DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i-- 282 (412)
T 2vd5_A 205 DFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI-- 282 (412)
T ss_dssp CCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH--
T ss_pred echhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHH--
Confidence 99999876554433344568999999999997 457899999999999999999999999877654422111
Q ss_pred HHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCC---CCHHHHHHHHHHhHhh
Q 002149 833 FWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQR---PDMGHAVNVLAPLVEK 895 (959)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Pt~~ev~~~L~~~~~~ 895 (959)
.... ..+. .+.........+.+++.+||. +|.+| |+++|+++ +++++.
T Consensus 283 ----~~~~----~~~~----~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~--Hpff~~ 333 (412)
T 2vd5_A 283 ----VHYK----EHLS----LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT--HPFFFG 333 (412)
T ss_dssp ----HTHH----HHCC----CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT--SGGGTT
T ss_pred ----Hhcc----cCcC----CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc--CCCcCC
Confidence 0000 0000 000001122367899999999 99998 58999876 566653
No 92
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.4e-39 Score=348.35 Aligned_cols=253 Identities=28% Similarity=0.436 Sum_probs=195.8
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEccccccc--HHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVIS--KKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|+..+.||+|+||.||+|... ++.||||++...... ....+.+.+|+++++.++||||+++++++.+....++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357899999999999999999876 899999998754222 22356788999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC---eEecCCCCCCEEECC--------CCcE
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQS---FIHRDLKSSNILLGD--------DFRA 756 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~---ivH~Dik~~NiLl~~--------~~~~ 756 (959)
|||+++++|.+++.. ..+++..++.++.|++.||+|||+ ++ |+||||||+||+++. ++.+
T Consensus 85 ~e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~ 155 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKIL 155 (271)
T ss_dssp EECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred EEcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcce
Confidence 999999999998832 578999999999999999999999 66 999999999999986 6789
Q ss_pred EEeeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhh
Q 002149 757 KVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNI 836 (959)
Q Consensus 757 ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~ 836 (959)
||+|||+++...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||............
T Consensus 156 kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~------ 226 (271)
T 3dtc_A 156 KITDFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV------ 226 (271)
T ss_dssp EECCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH------
T ss_pred EEccCCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhh------
Confidence 999999998654332 22357899999999999999999999999999999999999999876643321110
Q ss_pred hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 002149 837 KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPL 892 (959)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 892 (959)
...... ..........+.+++.+|++.||++||++.|+++.|+.+
T Consensus 227 ------~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 227 ------AMNKLA-----LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ------HTSCCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ------hcCCCC-----CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 000000 011112234688999999999999999999999998753
No 93
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=354.47 Aligned_cols=247 Identities=24% Similarity=0.272 Sum_probs=196.9
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|+..++||+|+||+||+|... +|+.||||++............+..|+..+..+ +||||+++++++.++...++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 357999999999999999999775 799999999876555555556666777766666 899999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+ +++|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 136 ~e~~-~~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EECC-CCBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred Eecc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 9999 789988886532 569999999999999999999999 89999999999999999999999999999866
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
.... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+....... . +..... ......
T Consensus 208 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~--~----~~~~~~-~~~~~~-- 275 (311)
T 3p1a_A 208 GTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ--Q----LRQGYL-PPEFTA-- 275 (311)
T ss_dssp C--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH--H----HTTTCC-CHHHHT--
T ss_pred ccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH--H----HhccCC-Cccccc--
Confidence 4432 2334579999999998875 79999999999999999999977665421110 0 000000 000000
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
.....+.+++.+||+.||++|||+.|+++
T Consensus 276 -----------~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 276 -----------GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -----------TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -----------CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11236889999999999999999999987
No 94
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=6.8e-39 Score=360.19 Aligned_cols=311 Identities=22% Similarity=0.323 Sum_probs=230.8
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC-----ce
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG-----YE 683 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 683 (959)
..+|+..+.||+|+||.||+|... +++.||||++... ......+.+.+|+++++.++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 468999999999999999999754 6889999998753 2345567889999999999999999999998765 36
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccc
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGL 763 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGl 763 (959)
.++||||+. |+|.+++.. ..+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 105 ~~iv~e~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp EEEEEECCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcc
Confidence 899999995 699988854 458999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcc--eeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcch
Q 002149 764 VKLAPDSERS--VVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDK 840 (959)
Q Consensus 764 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 840 (959)
++........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+............. .
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~ 253 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS-Q 253 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCC-H
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCC-H
Confidence 9865433221 1244689999999998765 4589999999999999999999999988765443222111100000 0
Q ss_pred HHH--------HHhcCCcccCCCCCH-----HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCccc
Q 002149 841 EKL--------RAAIDPILEVNDDTF-----ETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEYS 907 (959)
Q Consensus 841 ~~~--------~~~~~~~~~~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~ 907 (959)
+.+ ............... .....+.+++.+||+.||++|||+.|+++ +++++.+..+.+++....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~~~~~~~~~~~~~~~~ 331 (364)
T 3qyz_A 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--HPYLEQYYDPSDEPIAEA 331 (364)
T ss_dssp HHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SGGGTTTCCGGGSCCCSS
T ss_pred HHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc--CcchhhccCcccccCCCC
Confidence 000 111111111011111 11236789999999999999999999987 788888776666655544
Q ss_pred CcccCCCh-hhhHHHHHHhhCCCcceee
Q 002149 908 GIDYSLPL-NQMVKDWQEAEGKDLSYVS 934 (959)
Q Consensus 908 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 934 (959)
.+..+... ....++|++...++...+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 359 (364)
T 3qyz_A 332 PFKFDMELDDLPKEKLKELIFEETARFQ 359 (364)
T ss_dssp CCCCC-----CCHHHHHHHHHHHTGGGC
T ss_pred cCCcccccccCCHHHHHHHHHHHHHHhh
Confidence 44444433 3346678887766665554
No 95
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5e-39 Score=361.94 Aligned_cols=306 Identities=21% Similarity=0.287 Sum_probs=218.8
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc------
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY------ 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 682 (959)
.++|+..+.||+|+||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999754 6889999999876555666788999999999999999999999987654
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..++||||++ |+|.+.+. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 104 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ceEEEEEcCC-CCHHHHHh-------hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEee
Confidence 7899999995 67877773 348899999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc---
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD--- 839 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 839 (959)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+..... +......
T Consensus 173 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i--~~~~~~~~~~ 248 (371)
T 2xrw_A 173 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV--IEQLGTPCPE 248 (371)
T ss_dssp C------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HC-CCCCCHH
T ss_pred ccccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHHhCCCCHH
Confidence 998654321 234467999999999999999999999999999999999999999887654321111 1000000
Q ss_pred -----hHHHHHhcCCcccCC--------------CC---CHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 840 -----KEKLRAAIDPILEVN--------------DD---TFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 840 -----~~~~~~~~~~~~~~~--------------~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
.......+....... .. .......+.+++.+||..||++|||++|+++ ++++..|.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~--hp~~~~~~ 326 (371)
T 2xrw_A 249 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ--HPYINVWY 326 (371)
T ss_dssp HHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH--SHHHHTTC
T ss_pred HHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC--Ccchhhhc
Confidence 001111111110000 00 1122457889999999999999999999988 77777665
Q ss_pred CCCCCCCcc-cCccc-CCChhhhHHHHHHhhCCCcce
Q 002149 898 PLDDEPEEY-SGIDY-SLPLNQMVKDWQEAEGKDLSY 932 (959)
Q Consensus 898 ~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 932 (959)
.+.+..... ...+. ..+....+++|++....++..
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (371)
T 2xrw_A 327 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMD 363 (371)
T ss_dssp CHHHHTCCCCCCCTTTTCCCCCCHHHHHHHHHHHHHH
T ss_pred CccccCCCCCCCCChhhccccCcHHHHHHHHHHHHHH
Confidence 432211111 11111 123356778899887665443
No 96
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.7e-39 Score=352.77 Aligned_cols=260 Identities=28% Similarity=0.416 Sum_probs=217.2
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|+..+.||+|+||.||+|... +++.||||++... ....+.+.+|+++++.++||||+++++++.+....++||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 467889999999999999999775 4889999998753 334567899999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++++|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 89 e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 89 EFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp ECCTTEEHHHHHHHC---CTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EcCCCCcHHHHHHhc---ccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 999999999999652 33669999999999999999999999 899999999999999999999999999998766
Q ss_pred CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
...........+|+.|+|||++.+..++.++||||||+++|||++ |..||......+..... ....
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~-------------~~~~ 229 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-------------EKDY 229 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-------------HTTC
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------hccC
Confidence 544444445567889999999999999999999999999999999 99999876654321111 1111
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
... ........+.+++.+|++.||.+||++.++++.|+.++++.
T Consensus 230 ~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 230 RME-----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCC-----CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 11122346889999999999999999999999999887753
No 97
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.3e-39 Score=354.72 Aligned_cols=275 Identities=28% Similarity=0.388 Sum_probs=213.9
Q ss_pred cCC-cccCcccccCceEEEEEEEc-----CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe--Cc
Q 002149 611 KNF-ASENELGRGGFGVVYKGELD-----DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA--GY 682 (959)
Q Consensus 611 ~~~-~~~~~lG~G~fg~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~ 682 (959)
++| +..+.||+|+||.||++.+. +++.||||++... ......+.+.+|+++++.++||||+++++++.+ ..
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAA 108 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTT
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCc
Confidence 344 88999999999999988653 6889999999865 345567789999999999999999999999987 46
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg 179 (318)
T 3lxp_A 109 SLQLVMEYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFG 179 (318)
T ss_dssp EEEEEECCCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGG
T ss_pred eEEEEEecccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcc
Confidence 78999999999999999854 348999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcc--eeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcch
Q 002149 763 LVKLAPDSERS--VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDK 840 (959)
Q Consensus 763 la~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 840 (959)
+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...+..... ..
T Consensus 180 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~-~~~~~~~~~-~~ 257 (318)
T 3lxp_A 180 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE-LIGIAQGQM-TV 257 (318)
T ss_dssp GCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH-HHCSCCHHH-HH
T ss_pred ccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh-hhcccccch-hH
Confidence 99876554321 223456888999999999999999999999999999999999998754321110 000000000 00
Q ss_pred HHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 841 EKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
..+.+.+..... ..........+.+++.+||+.||++||++.++++.|+.+.+++..
T Consensus 258 ~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 258 LRLTELLERGER-LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcccC-CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 111111111111 111122335788999999999999999999999999999887654
No 98
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4e-39 Score=371.86 Aligned_cols=253 Identities=29% Similarity=0.435 Sum_probs=208.0
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc-eEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY-ERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 688 (959)
.++|+..+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|++++++++||||+++++++.... ..++||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 457888999999999999999886 7899999997542 3467899999999999999999999987765 789999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 267 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp ECCTTCBHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 999999999999653 22457999999999999999999999 899999999999999999999999999998543
Q ss_pred CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
... ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.... +....
T Consensus 341 ~~~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~-------------i~~~~ 403 (450)
T 1k9a_A 341 STQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-------------VEKGY 403 (450)
T ss_dssp ----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHH-------------HHTTC
T ss_pred ccc----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-------------HHcCC
Confidence 321 22357889999999999999999999999999999998 9999987654332111 10000
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
.+..+ ......+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 404 --~~~~p---~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 404 --KMDAP---DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp --CCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --CCCCC---CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 11111 12234688999999999999999999999999988754
No 99
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=360.31 Aligned_cols=259 Identities=23% Similarity=0.338 Sum_probs=204.2
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCC--CCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRH--RHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv 687 (959)
.++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|+++++.++| +||+++++++..+...++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 35699999999999999999988889999999998765666777889999999999976 9999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
||+ .+|+|.+++.. ...+++.++..++.||+.||+|||+ ++|+||||||+|||++ ++.+||+|||+++..
T Consensus 88 ~e~-~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp ECC-CSEEHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EeC-CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 995 58999999864 2568999999999999999999999 8999999999999997 578999999999866
Q ss_pred CCCCcc-eeecccccccccccccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHh
Q 002149 768 PDSERS-VVTRLAGTFGYLAPEYAVT-----------GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWN 835 (959)
Q Consensus 768 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~ 835 (959)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--------- 228 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------- 228 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---------
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH---------
Confidence 443322 2345679999999999865 6788999999999999999999999986543211
Q ss_pred hhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 836 IKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
.+...+++... ..........+.+++.+||+.||.+|||+.++++ ++++...
T Consensus 229 ------~~~~~~~~~~~-~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~--hp~~~~~ 280 (343)
T 3dbq_A 229 ------KLHAIIDPNHE-IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA--HPYVQIQ 280 (343)
T ss_dssp ------HHHHHHCTTSC-CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SHHHHSC
T ss_pred ------HHHHHhcCCcc-cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh--Ccccccc
Confidence 11111221111 0011111236789999999999999999999988 5566543
No 100
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.7e-39 Score=361.44 Aligned_cols=254 Identities=20% Similarity=0.338 Sum_probs=199.6
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEccccccc-HHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVIS-KKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 686 (959)
.++|+..++||+|+||.||+|+.+ +++.||||++++.... ....+.+.+|..++.++ +||||+++++++.+....++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457999999999999999999765 6789999999865433 23345678899999887 89999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.
T Consensus 131 V~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 99999999999988642 468999999999999999999999 8999999999999999999999999999985
Q ss_pred CCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... ..........
T Consensus 203 ~~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~-------~~~~~~~~~i 274 (396)
T 4dc2_A 203 GLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-------NTEDYLFQVI 274 (396)
T ss_dssp CCCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-------------CCHHHHHHHH
T ss_pred cccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch-------hhHHHHHHHH
Confidence 33222 224456899999999999999999999999999999999999999975432211000 0000000111
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCH
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDM 882 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 882 (959)
.......+. .....+.+++.+||+.||++||++
T Consensus 275 ~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 275 LEKQIRIPR---SLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHCCCCCCT---TSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred hccccCCCC---cCCHHHHHHHHHHhcCCHhHcCCC
Confidence 111111111 122367899999999999999995
No 101
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8.5e-39 Score=360.21 Aligned_cols=252 Identities=23% Similarity=0.296 Sum_probs=206.4
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|++.+.||+|+||.||+|... +|+.||+|++... .......+.+|+++++.++||||+++++++.+....++||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc--chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 468999999999999999999764 6889999998754 3444567899999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC--CCcEEEeecccccc
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD--DFRAKVSDFGLVKL 766 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~--~~~~ki~DfGla~~ 766 (959)
||+++|+|.+++.. ....+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++.
T Consensus 128 E~~~gg~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 128 EFLSGGELFDRIAA----EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp ECCCCCBHHHHTTC----TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred EcCCCCcHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEeccccee
Confidence 99999999998843 22468999999999999999999999 89999999999999974 57899999999987
Q ss_pred CCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+..... . ..
T Consensus 201 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i---~----------~~ 265 (387)
T 1kob_A 201 LNPDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV---K----------RC 265 (387)
T ss_dssp CCTTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH---H----------HC
T ss_pred cCCCcc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHH---H----------hC
Confidence 654332 33457999999999999999999999999999999999999999876543321110 0 00
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
..... ..........+.+++.+||+.||++|||+.++++
T Consensus 266 -~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 266 -DWEFD-EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp -CCCCC-SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred -CCCCC-ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 00000 0001112346789999999999999999999987
No 102
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=9.6e-39 Score=368.86 Aligned_cols=279 Identities=21% Similarity=0.270 Sum_probs=221.2
Q ss_pred HhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCC-CCceeEEEEEEeCceEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRH-RHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~l 686 (959)
+.++|++.++||+|+||.||+|.. .+++.||||++..... ..++.+|+++++.++| +++..+..++......++
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 357899999999999999999975 5789999998765422 2347889999999976 566666777788889999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCcEEEeeccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL---GDDFRAKVSDFGL 763 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl---~~~~~~ki~DfGl 763 (959)
||||+ +++|.+++... ...+++.+++.++.||+.||+|||+ ++||||||||+|||+ +.++.+||+|||+
T Consensus 81 vme~~-g~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (483)
T ss_dssp EEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEECC-CCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCc
Confidence 99999 99999998642 2569999999999999999999999 899999999999999 5889999999999
Q ss_pred cccCCCCCcc------eeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhh
Q 002149 764 VKLAPDSERS------VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIK 837 (959)
Q Consensus 764 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 837 (959)
++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+............+...
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~- 231 (483)
T 3sv0_A 153 AKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK- 231 (483)
T ss_dssp CEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH-
T ss_pred ceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc-
Confidence 9866543321 122568999999999999999999999999999999999999999876543322222111110
Q ss_pred cchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCcccCcc
Q 002149 838 SDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEYSGID 910 (959)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~~~~ 910 (959)
.....+..... ....++.+++.+||+.||++||++.+|++.|+.++.......+..++|....
T Consensus 232 ----~~~~~~~~l~~------~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~~~ 294 (483)
T 3sv0_A 232 ----KVATSIEALCR------GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILK 294 (483)
T ss_dssp ----HHHSCHHHHHT------TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHHHT
T ss_pred ----cccccHHHHhc------CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchhhc
Confidence 11100000000 1123688999999999999999999999999999998888888878876443
No 103
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=361.56 Aligned_cols=266 Identities=24% Similarity=0.384 Sum_probs=209.2
Q ss_pred hcCCcccCcccccCceEEEEEEE------cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCc
Q 002149 610 TKNFASENELGRGGFGVVYKGEL------DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGY 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 682 (959)
.++|...+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++++ +||||+++++++....
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 46789999999999999999975 245689999987542 334457789999999999 8999999999999999
Q ss_pred eEEEEEEecCCCchhhHHhhcccC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSL------------------NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLK 744 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik 744 (959)
..++||||+++|+|.+++...... ....+++..++.++.||+.||+|||+ ++|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCC
Confidence 999999999999999999653211 11348999999999999999999999 899999999
Q ss_pred CCCEEECCCCcEEEeeccccccCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCC
Q 002149 745 SSNILLGDDFRAKVSDFGLVKLAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESR 822 (959)
Q Consensus 745 ~~NiLl~~~~~~ki~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~ 822 (959)
|+||+++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||+| |..||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999985543322 22334567889999999999999999999999999999998 999998765
Q ss_pred hHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 823 PEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
...... .. +....... ........+.+++.+||+.||++||++.+++++|+.++...
T Consensus 280 ~~~~~~--~~----------~~~~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 280 VDANFY--KL----------IQNGFKMD-----QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CSHHHH--HH----------HHTTCCCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cHHHHH--HH----------HhcCCCCC-----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 432211 10 11111111 11112346889999999999999999999999999876643
No 104
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=7.7e-39 Score=355.41 Aligned_cols=267 Identities=26% Similarity=0.383 Sum_probs=215.5
Q ss_pred hcCCcccCcccccCceEEEEEEEc--------CCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEe
Q 002149 610 TKNFASENELGRGGFGVVYKGELD--------DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVA 680 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 680 (959)
.++|+..+.||+|+||.||+|... +++.||||++.... .....+.+.+|+++++.+ +||||+++++++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 467899999999999999999763 46789999997642 455667899999999999 89999999999999
Q ss_pred CceEEEEEEecCCCchhhHHhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEE
Q 002149 681 GYERLLVYEYMPQGALSKHIFHWKSL-----------NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNIL 749 (959)
Q Consensus 681 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiL 749 (959)
....++||||+++|+|.+++...... ....+++..++.++.||+.||+|||+ .+|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEE
Confidence 99999999999999999999753321 12358999999999999999999999 89999999999999
Q ss_pred ECCCCcEEEeeccccccCCCCCcc-eeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 002149 750 LGDDFRAKVSDFGLVKLAPDSERS-VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQ 827 (959)
Q Consensus 750 l~~~~~~ki~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~ 827 (959)
++.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+..
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 269 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH
Confidence 999999999999999866543321 2233467889999999998899999999999999999999 99999877654321
Q ss_pred HHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 828 YLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
... ....... ........+.+++.+||+.||++||++.++++.|+.++.....
T Consensus 270 ~~~-------------~~~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 270 KLL-------------KEGHRMD-----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp HHH-------------HHTCCCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHH-------------hcCCCCC-----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 111 0100000 1112234688999999999999999999999999999876544
No 105
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.3e-39 Score=348.81 Aligned_cols=260 Identities=28% Similarity=0.443 Sum_probs=212.4
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
.++|+..+.||+|+||.||+|...+++.||||++..... ..+.+.+|+++++.++||||+++++++.. +..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 357889999999999999999988888999999875432 34678999999999999999999999764 46899999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+++++|.+++.... ...+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++....
T Consensus 88 ~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 88 YMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp CCTTCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 999999999985421 1368999999999999999999999 8999999999999999999999999999987655
Q ss_pred CCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
..........+|..|+|||.+.+..++.++||||||+++|||++ |+.||......+.... +.....
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-------------~~~~~~ 228 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN-------------LERGYR 228 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-------------HHTTCC
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHH-------------HhcccC
Confidence 43333334567889999999998899999999999999999999 9999987665332110 001011
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
.. ........+.+++.+|++.||++||++.++++.|+.++....
T Consensus 229 ~~-----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 229 MV-----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp CC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred CC-----CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 10 011223468899999999999999999999999999987643
No 106
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.9e-39 Score=353.99 Aligned_cols=279 Identities=21% Similarity=0.319 Sum_probs=199.0
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|+..+.||+|+||.||+|... +|+.||||++.... .....+.+.+|+++++.++||||+++++++..++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 357899999999999999999754 68999999987542 2233456889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhccc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 689 EYMPQGALSKHIFHWKS-LNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
||++ |+|.+++..... .....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9996 699998865332 122468999999999999999999999 89999999999999999999999999999865
Q ss_pred CCCCcceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+...... .............
T Consensus 159 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~ 235 (317)
T 2pmi_A 159 GIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF--DIMGTPNESLWPS 235 (317)
T ss_dssp TSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HHHCSCCTTTCGG
T ss_pred CCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH--HHhCCCChhHhhh
Confidence 43222 2334578999999999976 468999999999999999999999998876654322211 1100000000000
Q ss_pred c------CCccc-CCCCC----------HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 847 I------DPILE-VNDDT----------FETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 847 ~------~~~~~-~~~~~----------~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
+ .+... ..... ......+.+++.+||+.||++|||+.|+++ ++++.++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~--hp~f~~~~~ 302 (317)
T 2pmi_A 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH--HPWFAEYYH 302 (317)
T ss_dssp GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT--SGGGGGGCC
T ss_pred hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC--Chhhhcccc
Confidence 0 00000 00000 011236889999999999999999999987 677766544
No 107
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.1e-39 Score=351.01 Aligned_cols=259 Identities=31% Similarity=0.487 Sum_probs=202.4
Q ss_pred cCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEEe
Q 002149 611 KNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYEY 690 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 690 (959)
++|++.+.||+|+||.||+|... ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 57888999999999999999876 789999998643 345678999999999999999999998763 47899999
Q ss_pred cCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCc-EEEeeccccccCCC
Q 002149 691 MPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFR-AKVSDFGLVKLAPD 769 (959)
Q Consensus 691 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~-~ki~DfGla~~~~~ 769 (959)
+++|+|.+++.... ....+++..++.++.|+++||+|||+...++|+||||||+||+++.++. +||+|||+++....
T Consensus 81 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 81 AEGGSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CTTCBHHHHHHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred CCCCCHHHHHhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999996422 2235789999999999999999999965568999999999999998876 79999999975533
Q ss_pred CCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCC
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDP 849 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (959)
. .....||+.|+|||++.+..++.++||||||+++|||++|+.||........... +... ....+
T Consensus 159 ~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~-------~~~~~ 223 (307)
T 2eva_A 159 H----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVH-------NGTRP 223 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH----HHHH-------TTCCC
T ss_pred c----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH----HHHh-------cCCCC
Confidence 2 2234689999999999999999999999999999999999999986543221111 0000 00000
Q ss_pred cccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 850 ILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 850 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
.. .......+.+++.+||+.||++||++.++++.|..+.+.+..
T Consensus 224 ~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 224 PL-----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp CC-----BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred Cc-----ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 00 111234678999999999999999999999999998776544
No 108
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.4e-39 Score=361.40 Aligned_cols=261 Identities=23% Similarity=0.301 Sum_probs=198.1
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|+..+.||+|+||.||+|... +++.||||++..... ..+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 457999999999999999999765 789999999875422 2356789999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCc--EEEeecccccc
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFR--AKVSDFGLVKL 766 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~--~ki~DfGla~~ 766 (959)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++. +||+|||+++.
T Consensus 96 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 96 EYASGGELYERICNA-----GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EeCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 999999999988542 468999999999999999999999 89999999999999987765 99999999984
Q ss_pred CCCCCcceeeccccccccccccccccCCCCcc-chHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHH
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAVTGKITTK-VDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRA 845 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (959)
..... ......||+.|+|||++.+..++.+ +|||||||++|||++|+.||.......... ..+..
T Consensus 168 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~------------~~~~~ 233 (361)
T 3uc3_A 168 SVLHS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR------------KTIQR 233 (361)
T ss_dssp ---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHH------------HHHHH
T ss_pred ccccC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHH------------HHHHH
Confidence 33221 2234579999999999988887766 899999999999999999998654322110 00111
Q ss_pred hcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 846 AIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
......... ........+.+++.+||+.||++|||+.|+++ ++++.++.+
T Consensus 234 ~~~~~~~~~-~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~--hp~f~~~~~ 283 (361)
T 3uc3_A 234 ILSVKYSIP-DDIRISPECCHLISRIFVADPATRISIPEIKT--HSWFLKNLP 283 (361)
T ss_dssp HHTTCCCCC-TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT--SHHHHTTCC
T ss_pred HhcCCCCCC-CcCCCCHHHHHHHHHHccCChhHCcCHHHHHh--CcchhcCCc
Confidence 111111101 01112246789999999999999999999988 577765544
No 109
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-39 Score=354.33 Aligned_cols=251 Identities=27% Similarity=0.403 Sum_probs=207.3
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEccccccc-HHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVIS-KKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
++|+..+.||+|+||.||+|... +|+.||+|++.+.... ....+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 57899999999999999999765 7899999998754221 133567889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 86 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 86 DYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp CCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 999999999998542 468999999999999999999999 899999999999999999999999999998654
Q ss_pred CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .+ +.
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------~i----------~~ 217 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE------KI----------LN 217 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HH----------HH
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH------HH----------Hh
Confidence 32 234689999999999999999999999999999999999999998765433211 00 11
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhHh
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRP-----DMGHAVNVLAPLVE 894 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~L~~~~~ 894 (959)
.....+. .....+.+++.+|+..||++|| +++++++ +++++
T Consensus 218 ~~~~~p~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~--hp~f~ 263 (318)
T 1fot_A 218 AELRFPP---FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN--HPWFK 263 (318)
T ss_dssp CCCCCCT---TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT--SGGGS
T ss_pred CCCCCCC---CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc--Ccccc
Confidence 1111111 1123678999999999999999 8888876 45543
No 110
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.6e-38 Score=344.34 Aligned_cols=260 Identities=25% Similarity=0.347 Sum_probs=213.1
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
+.++|++.+.||+|+||.||+|... +++.||+|++..........+.+.+|+.++++++||||+++++++......++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3578999999999999999999764 689999999987666667778899999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCc---EEEeecccc
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFR---AKVSDFGLV 764 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~---~ki~DfGla 764 (959)
|||+++++|.+.+... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++
T Consensus 84 ~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~ 155 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155 (284)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence 9999999998888542 468999999999999999999999 89999999999999976655 999999999
Q ss_pred ccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHH
Q 002149 765 KLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLR 844 (959)
Q Consensus 765 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (959)
........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+..... . .
T Consensus 156 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~---~---------~ 221 (284)
T 3kk8_A 156 IEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI---K---------A 221 (284)
T ss_dssp EECCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---H---------H
T ss_pred EEcccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHH---H---------h
Confidence 86654322 23467999999999999999999999999999999999999999876543321111 0 0
Q ss_pred HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 845 AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
....... .........+.+++.+|++.||++||++.|+++ ++++..
T Consensus 222 ~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~--h~~~~~ 267 (284)
T 3kk8_A 222 GAYDYPS---PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK--VPWICN 267 (284)
T ss_dssp TCCCCCT---TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT--SHHHHS
T ss_pred ccccCCc---hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc--CccccC
Confidence 0000000 000112246789999999999999999999987 555554
No 111
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.2e-39 Score=359.30 Aligned_cols=251 Identities=28% Similarity=0.390 Sum_probs=205.3
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 685 (959)
..++|...+.||+|+||.||+|+.+ +|+.||||++++... .....+.+..|..++..+ +||||+++++++.+....+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 3578999999999999999999865 689999999876422 123355678899999887 8999999999999999999
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 95 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 999999999999998642 468999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHH
Q 002149 766 LAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRA 845 (959)
Q Consensus 766 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (959)
...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+ ...
T Consensus 167 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i------~~~------ 233 (345)
T 1xjd_A 167 ENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI------RMD------ 233 (345)
T ss_dssp CCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHC------
T ss_pred hcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHH------HhC------
Confidence 543322 1234568999999999999999999999999999999999999999876653321111 000
Q ss_pred hcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHH-HHHH
Q 002149 846 AIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMG-HAVN 887 (959)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-ev~~ 887 (959)
.... + ......+.+++.+||..||++||++. ++.+
T Consensus 234 --~~~~--p---~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 234 --NPFY--P---RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp --CCCC--C---TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred --CCCC--C---cccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 0001 1 11224678999999999999999997 6654
No 112
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=361.43 Aligned_cols=251 Identities=23% Similarity=0.329 Sum_probs=203.8
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+++++.++||||+++++++.+....++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57899999999999999999765 688999999865421 2234567889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+.+|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 95 e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp CCCTTEEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 99999999999853 2568999999999999999999999 899999999999999999999999999998664
Q ss_pred CCCcceeecccccccccccccccc---CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHH
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVT---GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRA 845 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (959)
... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..........+...+..
T Consensus 167 ~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~---------- 234 (384)
T 4fr4_A 167 RET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET---------- 234 (384)
T ss_dssp TTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH----------
T ss_pred CCC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh----------
Confidence 432 2345689999999999864 4589999999999999999999999986544332222211110
Q ss_pred hcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCC-HHHHHH
Q 002149 846 AIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPD-MGHAVN 887 (959)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~ev~~ 887 (959)
.... ........+.+++.+||+.||++||+ ++++.+
T Consensus 235 ---~~~~---~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 235 ---TVVT---YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ---CCCC---CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ---cccC---CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0011 01112246789999999999999998 666654
No 113
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=8.4e-39 Score=347.16 Aligned_cols=255 Identities=31% Similarity=0.549 Sum_probs=203.1
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHH-----HHHHHHHHHHHHhcCCCCceeEEEEEEeCce
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKA-----VDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE 683 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 683 (959)
.++|+..+.||+|+||.||+|.. .+++.||||++......... .+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35789999999999999999976 47899999998654322211 167899999999999999999999986655
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCEEECCCCc-----E
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQS--FIHRDLKSSNILLGDDFR-----A 756 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dik~~NiLl~~~~~-----~ 756 (959)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ ++ |+||||||+||+++.++. +
T Consensus 97 -~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~ 168 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCA 168 (287)
T ss_dssp -EEEEECCTTCBHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred -eEEEEecCCCCHHHHHhc----ccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeE
Confidence 699999999999988854 23579999999999999999999999 77 999999999999988776 9
Q ss_pred EEeeccccccCCCCCcceeecccccccccccccc--ccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHH
Q 002149 757 KVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYA--VTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFW 834 (959)
Q Consensus 757 ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~ 834 (959)
||+|||+++.... ......||+.|+|||++ ....++.++|||||||++|||++|+.||...............
T Consensus 169 kl~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~- 243 (287)
T 4f0f_A 169 KVADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR- 243 (287)
T ss_dssp EECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH-
T ss_pred EeCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh-
Confidence 9999999985433 23446799999999998 3456789999999999999999999999876543322111100
Q ss_pred hhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 002149 835 NIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPL 892 (959)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 892 (959)
.....+. ........+.+++.+||+.||++||++.++++.|+++
T Consensus 244 ---------~~~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 ---------EEGLRPT-----IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ---------HSCCCCC-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ---------ccCCCCC-----CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0011111 1112234688999999999999999999999988753
No 114
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-38 Score=353.06 Aligned_cols=272 Identities=23% Similarity=0.367 Sum_probs=206.0
Q ss_pred HHHHHHhcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhc--CCCCceeEEEEEEeC
Q 002149 604 QVLRNVTKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV--RHRHLVSLLGYSVAG 681 (959)
Q Consensus 604 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~ 681 (959)
.....+.++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++...
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 344556688999999999999999999876 899999998643 223445566666554 899999999999887
Q ss_pred ----ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCCEEECC
Q 002149 682 ----YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLA-----HQSFIHRDLKSSNILLGD 752 (959)
Q Consensus 682 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~Dik~~NiLl~~ 752 (959)
...++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+.+ +.+|+||||||+|||++.
T Consensus 104 ~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~ 177 (337)
T 3mdy_A 104 TGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK 177 (337)
T ss_dssp CGGGCEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred CCCCCceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC
Confidence 788999999999999999954 46899999999999999999999820 129999999999999999
Q ss_pred CCcEEEeeccccccCCCCCcce---eeccccccccccccccccCCCCcc------chHHHHHHHHHHHHhC---------
Q 002149 753 DFRAKVSDFGLVKLAPDSERSV---VTRLAGTFGYLAPEYAVTGKITTK------VDVFSFGVVLMELLTG--------- 814 (959)
Q Consensus 753 ~~~~ki~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlG~ll~elltg--------- 814 (959)
++.+||+|||+++......... .....||+.|+|||++.+...+.+ +|||||||++|||++|
T Consensus 178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~ 257 (337)
T 3mdy_A 178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257 (337)
T ss_dssp TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccc
Confidence 9999999999998654432221 124579999999999988766665 9999999999999999
Q ss_pred -CCCCCCCChHHHH--HHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 002149 815 -LMALDESRPEERQ--YLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAP 891 (959)
Q Consensus 815 -~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 891 (959)
+.||......... .....+ ......+..............+.+++.+||+.||++||++.+++++|+.
T Consensus 258 ~~~p~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 258 YQLPYHDLVPSDPSYEDMREIV---------CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp CCCTTTTTSCSSCCHHHHHHHH---------TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred ccccHhhhcCCCCchhhhHHHH---------hhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 6666543322110 000000 0001111111111122566789999999999999999999999999999
Q ss_pred hHhhc
Q 002149 892 LVEKW 896 (959)
Q Consensus 892 ~~~~~ 896 (959)
+.+..
T Consensus 329 l~~~~ 333 (337)
T 3mdy_A 329 MSESQ 333 (337)
T ss_dssp HHHTT
T ss_pred HHhhc
Confidence 88754
No 115
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=344.26 Aligned_cols=261 Identities=25% Similarity=0.360 Sum_probs=212.2
Q ss_pred cCCcccC-cccccCceEEEEEEEc---CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEE
Q 002149 611 KNFASEN-ELGRGGFGVVYKGELD---DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 611 ~~~~~~~-~lG~G~fg~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 686 (959)
++|.+.+ .||+|+||.||+|... +++.||||++... ......+.+.+|+++++.++||||+++++++ ..+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 4566665 8999999999999753 5788999999764 2455677899999999999999999999999 5567899
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||||+++++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 87 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEECCTTEEHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHh----CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceee
Confidence 9999999999999853 23569999999999999999999999 8999999999999999999999999999986
Q ss_pred CCCCCcce--eeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHH
Q 002149 767 APDSERSV--VTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKL 843 (959)
Q Consensus 767 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (959)
........ .....||+.|+|||++.+..++.++||||||+++|||++ |+.||......+.... +.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~---i~--------- 227 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF---IE--------- 227 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH---HH---------
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH---Hh---------
Confidence 64433221 223456899999999988899999999999999999999 9999987665332111 10
Q ss_pred HHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 844 RAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
.... . .........+.+++.+||+.||++||++.++++.|+.++.....
T Consensus 228 -~~~~--~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 228 -QGKR--M---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp -TTCC--C---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred -cCCc--C---CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 0000 0 11112234788999999999999999999999999999876544
No 116
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1e-38 Score=359.45 Aligned_cols=307 Identities=23% Similarity=0.355 Sum_probs=226.9
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceE---
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYER--- 684 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 684 (959)
+.++|...+.||+|+||.||+|... +|+.||||++..........+.+.+|+.+++.++||||+++++++......
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 3568999999999999999999754 689999999987655666678899999999999999999999999876654
Q ss_pred ---EEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeec
Q 002149 685 ---LLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDF 761 (959)
Q Consensus 685 ---~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~Df 761 (959)
++||||+. ++|.+.+. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECST
T ss_pred eeEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEec
Confidence 99999995 78877762 348999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCcceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcch
Q 002149 762 GLVKLAPDSERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDK 840 (959)
Q Consensus 762 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 840 (959)
|+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+..... +.......
T Consensus 189 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i--~~~~~~~~ 262 (371)
T 4exu_A 189 GLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI--LKVTGVPG 262 (371)
T ss_dssp TCC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHHHCCCC
T ss_pred CcccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--HHHhCCCc
Confidence 999855432 234578999999999987 78899999999999999999999999887654432211 11000000
Q ss_pred HHH---------HHhcCCcccCCCCCH-----HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCcc
Q 002149 841 EKL---------RAAIDPILEVNDDTF-----ETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEY 906 (959)
Q Consensus 841 ~~~---------~~~~~~~~~~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~ 906 (959)
... ...+........... .....+.+++.+||+.||++|||+.|+++ +++++.+..+..+....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~f~~~~~~~~~~~~~ 340 (371)
T 4exu_A 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT--HPFFEPFRDPEEETEAQ 340 (371)
T ss_dssp HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT--SGGGTTTCCGGGCCCCS
T ss_pred HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc--CcccccCCCcccccccc
Confidence 000 011100011011111 11346889999999999999999999987 78887766554444333
Q ss_pred cCcccCCC-hhhhHHHHHHhhCCCcceee
Q 002149 907 SGIDYSLP-LNQMVKDWQEAEGKDLSYVS 934 (959)
Q Consensus 907 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 934 (959)
..++.... ....+++|++...++...++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (371)
T 4exu_A 341 QPFDDSLEHEKLTVDEWKQHIYKEIVNFS 369 (371)
T ss_dssp SCCCCTTSSCCCCHHHHHHHHHHHHHHCC
T ss_pred cCcCcchhhcccchHHHHHHHHHHHHhcc
Confidence 33332222 23456778887766555443
No 117
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.4e-39 Score=354.08 Aligned_cols=267 Identities=26% Similarity=0.379 Sum_probs=205.2
Q ss_pred HhcCCcccCcccccCceEEEEEEEc----CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCce-
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD----DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE- 683 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 683 (959)
..++|...+.||+|+||.||+|... +++.||||++..........+.+.+|+.++++++||||+++++++.....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3567899999999999999999654 34589999998765566677889999999999999999999999887553
Q ss_pred ----EEEEEEecCCCchhhHHhhccc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEE
Q 002149 684 ----RLLVYEYMPQGALSKHIFHWKS-LNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKV 758 (959)
Q Consensus 684 ----~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki 758 (959)
.++||||+++|+|.+++..... .....+++..++.++.||++||+|||+ ++|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEE
Confidence 4899999999999999854322 233579999999999999999999999 89999999999999999999999
Q ss_pred eeccccccCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhh
Q 002149 759 SDFGLVKLAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNI 836 (959)
Q Consensus 759 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 836 (959)
+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+.....
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~------ 262 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL------ 262 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH------
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH------
Confidence 99999986543322 12233467889999999999999999999999999999999 89999876654321110
Q ss_pred hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 837 KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
....... ........+.+++.+||+.||++||++.++++.|+.+++..
T Consensus 263 -------~~~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 263 -------LHGHRLK-----QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp -------HTTCCCC-----CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -------HcCCCCC-----CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 0000000 11122346889999999999999999999999999988754
No 118
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.9e-39 Score=362.64 Aligned_cols=257 Identities=23% Similarity=0.344 Sum_probs=203.7
Q ss_pred cCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC--CCCceeEEEEEEeCceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR--HRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 688 (959)
++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|+++++.++ ||||+++++++......++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 469999999999999999998888999999999776556677788999999999996 599999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
| +.+++|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++...
T Consensus 136 E-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp E-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred e-cCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 9 5589999998642 468899999999999999999999 8999999999999996 5799999999998664
Q ss_pred CCCcc-eeecccccccccccccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhh
Q 002149 769 DSERS-VVTRLAGTFGYLAPEYAVT-----------GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNI 836 (959)
Q Consensus 769 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~ 836 (959)
..... .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~---------- 275 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---------- 275 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH----------
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH----------
Confidence 43222 2345679999999999865 4688999999999999999999999976543211
Q ss_pred hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 837 KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
.+...++...... ........+.+++.+||+.||++||++.|+++ ++++..
T Consensus 276 -----~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~--hp~~~~ 326 (390)
T 2zmd_A 276 -----KLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLA--HPYVQI 326 (390)
T ss_dssp -----HHHHHHCTTSCCC-CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SHHHHS
T ss_pred -----HHHHHhCccccCC-CCccchHHHHHHHHHHcccChhhCCCHHHHhh--CcCccc
Confidence 1111222111100 00011236789999999999999999999987 455554
No 119
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5e-39 Score=358.83 Aligned_cols=271 Identities=24% Similarity=0.270 Sum_probs=208.7
Q ss_pred HHHHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccc---cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC
Q 002149 606 LRNVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVI---SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG 681 (959)
Q Consensus 606 ~~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 681 (959)
+..+.++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|+++++.++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345678899999999999999999976 4688999999865421 234567899999999999999999999999999
Q ss_pred ceEEEEEEecCCCchhhHHhhcccC-----------------------------------CCCCCCHHHHHHHHHHHHHH
Q 002149 682 YERLLVYEYMPQGALSKHIFHWKSL-----------------------------------NLEPLSWKRRLNIALDVARG 726 (959)
Q Consensus 682 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~g 726 (959)
...++||||+++|+|.+++...... ....+++..+..++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999988532111 01234678889999999999
Q ss_pred HHHHHhcCCCCeEecCCCCCCEEECCCC--cEEEeeccccccCCCCC---cceeecccccccccccccccc--CCCCccc
Q 002149 727 MEYLHSLAHQSFIHRDLKSSNILLGDDF--RAKVSDFGLVKLAPDSE---RSVVTRLAGTFGYLAPEYAVT--GKITTKV 799 (959)
Q Consensus 727 L~yLH~~~~~~ivH~Dik~~NiLl~~~~--~~ki~DfGla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~--~~~~~~~ 799 (959)
|+|||+ .+|+||||||+||+++.++ .+||+|||+++...... ........||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 999999 8999999999999998766 89999999998543211 122345679999999999875 6789999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCCcccCC-CCCHHHHHHHHHHHHhcccCCCCC
Q 002149 800 DVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDPILEVN-DDTFETFWTIAELAGHCTSREPSQ 878 (959)
Q Consensus 800 DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~ 878 (959)
|||||||++|||++|+.||......+..... . ....... .........+.+++.+||+.||.+
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~--~--------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQV--L--------------NKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--H--------------HCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHH--H--------------hcccccCCcccccCCHHHHHHHHHHcCCChhH
Confidence 9999999999999999999877654321111 0 0000000 000112346789999999999999
Q ss_pred CCCHHHHHHHHHHhHhhcC
Q 002149 879 RPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 879 RPt~~ev~~~L~~~~~~~~ 897 (959)
||++.++++ +++++.+.
T Consensus 322 Rps~~~~l~--hp~~~~~~ 338 (345)
T 3hko_A 322 RFDAMRALQ--HPWISQFS 338 (345)
T ss_dssp SCCHHHHHH--SHHHHTTS
T ss_pred CCCHHHHhc--ChhhccCh
Confidence 999999987 66666543
No 120
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.1e-38 Score=345.07 Aligned_cols=259 Identities=24% Similarity=0.334 Sum_probs=206.9
Q ss_pred hcCCcccCcccccCceEEEEEEEcC----CcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDD----GTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 685 (959)
.++|...+.||+|+||.||+|.... +..||||.+.... .....+.+.+|+.+++.++||||+++++++.++ ..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 4578899999999999999997542 3359999987652 445567899999999999999999999997654 568
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+||||+++++|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp EEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred EEEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCc
Confidence 999999999999998652 2468999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHH
Q 002149 766 LAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLR 844 (959)
Q Consensus 766 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (959)
..............+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+..... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~-------------~ 228 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL-------------E 228 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHH-------------H
T ss_pred ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHH-------------h
Confidence 665443333344567889999999998999999999999999999998 99999866544321111 0
Q ss_pred HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 845 AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
... ..... ......+.+++.+|++.||++||++.++++.|+.+.+.
T Consensus 229 ~~~--~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 229 KGD--RLPKP---DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HTC--CCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCC--CCCCC---CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 000 00001 11224688999999999999999999999999988764
No 121
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.9e-39 Score=382.22 Aligned_cols=260 Identities=29% Similarity=0.467 Sum_probs=212.1
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
.++|+..++||+|+||.||+|.++.+..||||+++.... ..+.|.+|+++|++++||||+++++++.+ ...++|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 456888999999999999999998888899999976432 24578999999999999999999999876 67899999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+++|+|.+++.... ...+++.+++.++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+++....
T Consensus 342 ~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 342 YMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp CCTTEEHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred hhcCCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 999999999996422 2458999999999999999999999 8999999999999999999999999999986644
Q ss_pred CCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
..........+|..|+|||++.+..++.++|||||||++|||++ |+.||.+....+....+ ....
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i-------------~~~~- 481 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-------------ERGY- 481 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHH-------------HTTC-
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------HcCC-
Confidence 22222233456789999999999999999999999999999999 99999877654321111 0000
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
.+... ......+.+++.+||+.||++||++.+|++.|+.++....
T Consensus 482 -~~~~~---~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 482 -RMPCP---PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp -CCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred -CCCCC---CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 01111 1223468899999999999999999999999988765443
No 122
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.3e-38 Score=353.81 Aligned_cols=261 Identities=21% Similarity=0.350 Sum_probs=206.2
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 687 (959)
++|+..+.||+|+||.||+|+.. +++.||+|++.+... .....+.+.+|..++.++ +||||+++++++.+....++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57899999999999999999765 688999999976543 344567788999999998 899999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 89 ~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 9999999999988542 468999999999999999999999 89999999999999999999999999999854
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHHHHhhhcchHHHHH
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQ--YLAAWFWNIKSDKEKLRA 845 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 845 (959)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .....+ ...
T Consensus 161 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~---------~~~ 230 (345)
T 3a8x_A 161 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL---------FQV 230 (345)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH---------HHH
T ss_pred cCCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH---------HHH
Confidence 3322 2234568999999999999999999999999999999999999999753221110 000000 001
Q ss_pred hcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCH------HHHHHHHHHhHh
Q 002149 846 AIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDM------GHAVNVLAPLVE 894 (959)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~ev~~~L~~~~~ 894 (959)
........+. .....+.+++.+||+.||++||++ .++++ +++++
T Consensus 231 i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~--hp~f~ 280 (345)
T 3a8x_A 231 ILEKQIRIPR---SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG--HPFFR 280 (345)
T ss_dssp HHHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT--SGGGT
T ss_pred HHcCCCCCCC---CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc--CCccC
Confidence 1111111111 123467899999999999999996 56654 45543
No 123
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.6e-38 Score=349.08 Aligned_cols=270 Identities=23% Similarity=0.341 Sum_probs=204.6
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEccccc-ccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGV-ISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
..+|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++......++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35799999999999999999975 578999999987532 2455667899999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++|+|.+++..... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 111 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999865332 23668999999999999999999999 89999999999999999999999999999865
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.+....... +... +....
T Consensus 187 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~----------~~~~~ 254 (310)
T 2wqm_A 187 SSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS-LCKK----------IEQCD 254 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHH-HHHH----------HHTTC
T ss_pred cCCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHH-HHHH----------hhccc
Confidence 43322 223457899999999999999999999999999999999999999764322111 1110 10000
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCC
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPL 899 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~ 899 (959)
.+... .......+.+++.+||+.||++||++.++++.|+++...+..+
T Consensus 255 ~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 255 YPPLP----SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp SCCCC----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred CCCCc----ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 01010 0112346889999999999999999999999999998876653
No 124
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.4e-39 Score=351.43 Aligned_cols=271 Identities=24% Similarity=0.377 Sum_probs=207.4
Q ss_pred cCCcccCcccccCceEEEEEEE-----cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC--ce
Q 002149 611 KNFASENELGRGGFGVVYKGEL-----DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG--YE 683 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 683 (959)
++|+..+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|+++++.++||||+++++++... ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 4588899999999999999984 368899999987542 333457789999999999999999999999876 66
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccc
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGL 763 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGl 763 (959)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccc
Confidence 899999999999999985422 568999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCc--ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhh--hcc
Q 002149 764 VKLAPDSER--SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNI--KSD 839 (959)
Q Consensus 764 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~ 839 (959)
++....... .......||..|+|||++.+..++.++||||||+++|||++|..|+........ ...... ...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~ 248 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFL----KMIGPTHGQMT 248 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH----HHHCSCCGGGH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHh----hccCCcccccC
Confidence 986654432 223345788899999999999999999999999999999999988643211100 000000 000
Q ss_pred hHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 840 KEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
...+...+..... ..........+.+++.+||+.||++|||+.++++.|+.+++
T Consensus 249 ~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 249 VTRLVNTLKEGKR-LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp HHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhccCC-CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 0111111111111 11111233468899999999999999999999999998763
No 125
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.9e-39 Score=355.95 Aligned_cols=276 Identities=26% Similarity=0.355 Sum_probs=211.3
Q ss_pred cCCcccCcccccCceEEEEEEE-----cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEE--eCce
Q 002149 611 KNFASENELGRGGFGVVYKGEL-----DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSV--AGYE 683 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 683 (959)
++|+..+.||+|+||.||+|.+ .+++.||||++... .....+.+.+|+++++.++||||+++++++. +...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 5788999999999999999984 46889999998764 4556678999999999999999999999887 4567
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccc
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGL 763 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGl 763 (959)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred EEEEEeecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccccc
Confidence 899999999999999986532 458999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcc--eeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchH
Q 002149 764 VKLAPDSERS--VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKE 841 (959)
Q Consensus 764 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 841 (959)
++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||............ ... ......
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~-~~~-~~~~~~ 251 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG-CER-DVPALS 251 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC------CCHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcc-ccc-ccccHH
Confidence 9876543322 223356888999999999999999999999999999999999998754322110000 000 000001
Q ss_pred HHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 842 KLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
.+...+..... ..........+.+++.+||+.||++||++.++++.|+.+......
T Consensus 252 ~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 252 RLLELLEEGQR-LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp HHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred HHHHHhhcccC-CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 11111111111 111222334688999999999999999999999999988765543
No 126
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=8.3e-39 Score=359.49 Aligned_cols=252 Identities=26% Similarity=0.333 Sum_probs=199.6
Q ss_pred ccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEEecCC
Q 002149 615 SENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYEYMPQ 693 (959)
Q Consensus 615 ~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 693 (959)
..+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|++++++++||||+++++++.+....++||||+++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEccc--ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 356899999999999976 46899999998764 345567899999999999999999999999999999999999999
Q ss_pred CchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE--CCCCcEEEeeccccccCCCCC
Q 002149 694 GALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL--GDDFRAKVSDFGLVKLAPDSE 771 (959)
Q Consensus 694 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl--~~~~~~ki~DfGla~~~~~~~ 771 (959)
|+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++......
T Consensus 171 ~~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 171 GELFDRIIDE----SYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp CEEHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 9999988542 2468999999999999999999999 899999999999999 667899999999998765433
Q ss_pred cceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCCcc
Q 002149 772 RSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDPIL 851 (959)
Q Consensus 772 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (959)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+... .... ...+..
T Consensus 244 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~--~i~~----------~~~~~~- 308 (373)
T 2x4f_A 244 K--LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN--NILA----------CRWDLE- 308 (373)
T ss_dssp B--CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--HHHH----------TCCCSC-
T ss_pred c--cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh----------ccCCCC-
Confidence 2 234579999999999999999999999999999999999999998876543211 1010 000000
Q ss_pred cCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 852 EVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 852 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
..........+.+++.+||+.||++||++.|+++ ++++.
T Consensus 309 --~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~--hp~~~ 347 (373)
T 2x4f_A 309 --DEEFQDISEEAKEFISKLLIKEKSWRISASEALK--HPWLS 347 (373)
T ss_dssp --SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH--SHHHH
T ss_pred --hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc--CcCcC
Confidence 0000112246789999999999999999999987 44444
No 127
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-38 Score=347.84 Aligned_cols=263 Identities=20% Similarity=0.257 Sum_probs=201.5
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|++.+.||+|+||.||+|... +++.||||++..... .....+.+.+|+.+++.++||||+++++++......++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999765 688999999876532 234457889999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 9999999999998642 468999999999999999999999 89999999999999999999999999999866
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
............||+.|+|||++.+..++.++||||||+++|||++|+.||........ ...+. ...
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~----------~~~ 251 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM---GAHIN----------QAI 251 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH---HHHHH----------SCC
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH---HHHhc----------cCC
Confidence 54433334456799999999999999999999999999999999999999987543211 11111 000
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCC-CHHHHHHHHHHhHhhc
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRP-DMGHAVNVLAPLVEKW 896 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~ev~~~L~~~~~~~ 896 (959)
.... .........+.+++.+||+.||++|| +++++++.|+..+...
T Consensus 252 ~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 252 PRPS---TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp CCGG---GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred CCcc---ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 0000 00111223678999999999999999 9999999988776543
No 128
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7.5e-39 Score=356.34 Aligned_cols=251 Identities=24% Similarity=0.291 Sum_probs=207.4
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
++|+..+.||+|+||.||+|... +|+.||||++.+... .....+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57899999999999999999765 689999999865422 1234567889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 121 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp ECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceecc
Confidence 999999999998642 458999999999999999999999 899999999999999999999999999998664
Q ss_pred CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... +. .
T Consensus 193 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~------i~----------~ 252 (350)
T 1rdq_E 193 GR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK------IV----------S 252 (350)
T ss_dssp SC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------HH----------H
T ss_pred CC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHH------HH----------c
Confidence 32 2345799999999999999999999999999999999999999987654332111 00 0
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhHh
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRPD-----MGHAVNVLAPLVE 894 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~~L~~~~~ 894 (959)
.....+. .....+.+++.+||+.||++||+ ++++++ ++++.
T Consensus 253 ~~~~~p~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~--h~~f~ 298 (350)
T 1rdq_E 253 GKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN--HKWFA 298 (350)
T ss_dssp CCCCCCT---TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT--SGGGT
T ss_pred CCCCCCC---CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh--CcCcC
Confidence 1111111 12246789999999999999998 888876 44443
No 129
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.2e-38 Score=352.22 Aligned_cols=255 Identities=24% Similarity=0.355 Sum_probs=198.1
Q ss_pred hcCCcccCcccccCceEEEEEEE----cCCcEEEEEEccccccc--HHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCce
Q 002149 610 TKNFASENELGRGGFGVVYKGEL----DDGTKIAVKRMEAGVIS--KKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE 683 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~----~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 683 (959)
.++|+..+.||+|+||.||+|.. .+++.||+|++.+.... ......+.+|+++++.++||||+++++++.....
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999976 47899999999765322 2345567899999999999999999999999999
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccc
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGL 763 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGl 763 (959)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 99999999999999998542 468899999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHH
Q 002149 764 VKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKL 843 (959)
Q Consensus 764 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (959)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... +
T Consensus 168 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~---i---------- 233 (327)
T 3a62_A 168 CKESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDK---I---------- 233 (327)
T ss_dssp C-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---H----------
T ss_pred ccccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHH---H----------
Confidence 98543322 123446799999999999999999999999999999999999999987654332110 0
Q ss_pred HHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhHh
Q 002149 844 RAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRP-----DMGHAVNVLAPLVE 894 (959)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~L~~~~~ 894 (959)
........ ......+.+++.+||+.||++|| ++.++++ +++++
T Consensus 234 ---~~~~~~~p---~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~--hp~f~ 281 (327)
T 3a62_A 234 ---LKCKLNLP---PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA--HPFFR 281 (327)
T ss_dssp ---HHTCCCCC---TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH--SGGGS
T ss_pred ---HhCCCCCC---CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc--CCccc
Confidence 00011111 11224678999999999999999 7778866 45554
No 130
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.2e-38 Score=353.59 Aligned_cols=252 Identities=27% Similarity=0.379 Sum_probs=198.5
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc------
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY------ 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 682 (959)
.++|++.+.||+|+||.||+|... +|+.||||++.... .....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 467999999999999999999875 79999999987543 3445678999999999999999999999986543
Q ss_pred ---------------------------------------------------eEEEEEEecCCCchhhHHhhcccCCCCCC
Q 002149 683 ---------------------------------------------------ERLLVYEYMPQGALSKHIFHWKSLNLEPL 711 (959)
Q Consensus 683 ---------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l 711 (959)
..++||||+++|+|.+++.... .....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~ 161 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLEDR 161 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGGS
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--Cccch
Confidence 3789999999999999996532 23456
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCCCCc-----------ceeecccc
Q 002149 712 SWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDSER-----------SVVTRLAG 780 (959)
Q Consensus 712 ~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~~~~-----------~~~~~~~g 780 (959)
++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++....... .......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 788899999999999999999 8999999999999999999999999999986654321 12234579
Q ss_pred ccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHH
Q 002149 781 TFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFET 860 (959)
Q Consensus 781 t~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (959)
|+.|+|||++.+..++.++|||||||++|||++|..|+. +......... .... .......
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----~~~~~~~~~~-------------~~~~--~~~~~~~ 298 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----ERVRIITDVR-------------NLKF--PLLFTQK 298 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHHHHHHH-------------TTCC--CHHHHHH
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----HHHHHHHHhh-------------ccCC--CcccccC
Confidence 999999999999999999999999999999999866532 1111111010 0000 0111122
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 861 FWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 861 ~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
...+.+++.+||+.||++||++.|+++
T Consensus 299 ~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 299 YPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp CHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred ChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 345689999999999999999999987
No 131
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.9e-39 Score=359.87 Aligned_cols=270 Identities=23% Similarity=0.275 Sum_probs=210.0
Q ss_pred HHHHHHHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC-----CCCceeEEE
Q 002149 603 VQVLRNVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR-----HRHLVSLLG 676 (959)
Q Consensus 603 ~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~ 676 (959)
++....+.++|.+.++||+|+||.||+|.. .+++.||||++.. .....+.+..|+++++.++ ||||+++++
T Consensus 27 ~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 333345568999999999999999999976 4788999999874 2445567788999999996 999999999
Q ss_pred EEEeCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC----
Q 002149 677 YSVAGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD---- 752 (959)
Q Consensus 677 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~---- 752 (959)
++...+..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.
T Consensus 104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 104 KFMYYDHMCLIFEPL-GPSLYEIITRN---NYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEETTEEEEEECCC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCC
T ss_pred eeeECCeeEEEEcCC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEcccccc
Confidence 999999999999999 99999998652 22468999999999999999999999 89999999999999975
Q ss_pred ---------------------CCcEEEeeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHH
Q 002149 753 ---------------------DFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMEL 811 (959)
Q Consensus 753 ---------------------~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~el 811 (959)
++.+||+|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 789999999999865432 2345789999999999999999999999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC--------C---c--ccCCCCCHHH---------------HHH
Q 002149 812 LTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID--------P---I--LEVNDDTFET---------------FWT 863 (959)
Q Consensus 812 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~--~~~~~~~~~~---------------~~~ 863 (959)
++|+.||......+............. ......... . . .......... ...
T Consensus 253 l~g~~pf~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T 3llt_A 253 YTGSLLFRTHEHMEHLAMMESIIQPIP-KNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331 (360)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHTCCCC-HHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHH
T ss_pred HHCCCCCCCCcHHHHHHHHHHhcCCCC-HHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHH
Confidence 999999988765543322221111000 011111000 0 0 0000000000 135
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHH
Q 002149 864 IAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 864 l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
+.+++.+||+.||++|||+.|+++
T Consensus 332 l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 332 FCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHhcCChhhCCCHHHHhc
Confidence 679999999999999999999976
No 132
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.5e-39 Score=357.82 Aligned_cols=258 Identities=26% Similarity=0.410 Sum_probs=203.5
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcE----EEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTK----IAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 685 (959)
++|+..+.||+|+||.||+|... +++. ||+|.+.... .....+.+.+|+.+++.++||||+++++++. +...+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 57889999999999999999754 4554 7778765432 2233355778999999999999999999986 45688
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+||||+++|+|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 91 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEECCTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred EEEEeCCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCccc
Confidence 999999999999998542 2568899999999999999999999 899999999999999999999999999999
Q ss_pred cCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHH
Q 002149 766 LAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKL 843 (959)
Q Consensus 766 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (959)
....... .......||..|+|||++.+..++.++|||||||++|||++ |+.||......+......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~------------ 231 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE------------ 231 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH------------
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH------------
Confidence 7654332 22344578889999999999999999999999999999999 999998766544322111
Q ss_pred HHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 844 RAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
... ..... ......+.+++.+||+.||++||++.++++.|..+...
T Consensus 232 -~~~--~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 232 -KGE--RLAQP---QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp -TTC--BCCCC---TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred -cCC--CCCCC---CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 000 00000 01112467899999999999999999999999988653
No 133
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.4e-39 Score=355.60 Aligned_cols=253 Identities=24% Similarity=0.359 Sum_probs=205.9
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccH-HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISK-KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|.+.+.||+|+||.||+|.. .+++.||||++....... .....+.+|+++++.++||||+++++++......++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35799999999999999999976 578999999987542211 2235788999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+ +|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 88 ~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~ 158 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158 (336)
T ss_dssp ECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred EECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence 9999 88998888542 468999999999999999999999 89999999999999999999999999999866
Q ss_pred CCCCcceeeccccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKI-TTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
.... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......+. ...
T Consensus 159 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----------------~~~ 219 (336)
T 3h4j_B 159 TDGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----------------FKK 219 (336)
T ss_dssp TTSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----------------BCC
T ss_pred cCCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----------------HHH
Confidence 4432 2344579999999999988776 6899999999999999999999976542211 001
Q ss_pred cCC-cccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 847 IDP-ILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 847 ~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
+.. ....+ ......+.+++.+||+.||.+|||+.|+++ ++++..
T Consensus 220 i~~~~~~~p---~~~s~~~~~li~~~L~~dP~~Rpt~~eil~--hp~~~~ 264 (336)
T 3h4j_B 220 VNSCVYVMP---DFLSPGAQSLIRRMIVADPMQRITIQEIRR--DPWFNV 264 (336)
T ss_dssp CCSSCCCCC---TTSCHHHHHHHHTTSCSSGGGSCCHHHHTT--CHHHHT
T ss_pred HHcCCCCCc---ccCCHHHHHHHHHHcCCChhHCcCHHHHHh--Chhhcc
Confidence 110 01111 112246789999999999999999999987 566654
No 134
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=355.68 Aligned_cols=256 Identities=25% Similarity=0.346 Sum_probs=192.4
Q ss_pred HHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEE
Q 002149 608 NVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 686 (959)
.+.++|++.+.||+|+||.||+|... +++.||||++... ...+.+.+|++++++++||||+++++++.+....++
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT----VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc----hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 34578999999999999999999875 5789999998754 234568899999999999999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---CCcEEEeeccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD---DFRAKVSDFGL 763 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~---~~~~ki~DfGl 763 (959)
||||+++|+|.+++.. ...+++.++..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+
T Consensus 126 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~ 197 (349)
T 2w4o_A 126 VLELVTGGELFDRIVE-----KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGL 197 (349)
T ss_dssp EECCCCSCBHHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC-
T ss_pred EEEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCcc
Confidence 9999999999998843 2568999999999999999999999 89999999999999975 88999999999
Q ss_pred cccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHH
Q 002149 764 VKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKL 843 (959)
Q Consensus 764 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (959)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ..
T Consensus 198 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~~------------ 261 (349)
T 2w4o_A 198 SKIVEHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM--FR------------ 261 (349)
T ss_dssp -----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHH--HH------------
T ss_pred ccccCccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHH--HH------------
Confidence 98654322 233467999999999999999999999999999999999999999765543211 10
Q ss_pred HHhcCCcccC-CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 844 RAAIDPILEV-NDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 844 ~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
......... ..........+.+++.+||+.||++||++.++++ ++++.
T Consensus 262 -~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~--hp~~~ 310 (349)
T 2w4o_A 262 -RILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ--HPWVT 310 (349)
T ss_dssp -HHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH--STTTT
T ss_pred -HHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc--CcccC
Confidence 011110000 0011122346789999999999999999999977 44443
No 135
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=6.5e-39 Score=347.52 Aligned_cols=254 Identities=28% Similarity=0.376 Sum_probs=200.9
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|...+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+++++.++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 457899999999999999999764 68899999987653 2334577899999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCcEEEeeccccc
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL---GDDFRAKVSDFGLVK 765 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl---~~~~~~ki~DfGla~ 765 (959)
||+++|+|.+++..... ....+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++
T Consensus 100 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 100 ETCEGGELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp CCCSCCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EeCCCCcHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999998865322 22679999999999999999999999 899999999999999 456889999999998
Q ss_pred cCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHH
Q 002149 766 LAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRA 845 (959)
Q Consensus 766 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (959)
...... ......||+.|+|||++. ..++.++|||||||++|||++|+.||.+....+......
T Consensus 176 ~~~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~-------------- 238 (285)
T 3is5_A 176 LFKSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT-------------- 238 (285)
T ss_dssp C------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--------------
T ss_pred ecCCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhc--------------
Confidence 654432 234457999999999875 578999999999999999999999998876544221110
Q ss_pred hcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 846 AIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
......... .......+.+++.+||+.||++||++.|+++
T Consensus 239 ~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 239 YKEPNYAVE--CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HCCCCCCC----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCCcccccc--cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000111000 0011236779999999999999999999986
No 136
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=352.33 Aligned_cols=261 Identities=28% Similarity=0.437 Sum_probs=206.2
Q ss_pred cCCcccCcccccCceEEEEEEEcC-----CcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEE
Q 002149 611 KNFASENELGRGGFGVVYKGELDD-----GTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 685 (959)
++|...+.||+|+||.||+|.... +..||||++.... .......+.+|+++++.++||||+++++++......+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 567888999999999999997542 2359999987542 4455677999999999999999999999999999999
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+||||+++|+|.+++... ...+++.+++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 123 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 123 IITEYMENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEECCTTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred EEEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcch
Confidence 999999999999998542 2568999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCcc--eeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 766 LAPDSERS--VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 766 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.... +
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~---~--------- 263 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA---I--------- 263 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH---H---------
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHH---H---------
Confidence 65443221 1223356789999999999999999999999999999999 9999987654332110 0
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
.... ... ........+.+++.+||+.||++||++.++++.|+.+++...
T Consensus 264 -~~~~--~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 264 -NDGF--RLP---TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp -HTTC--CCC---CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred -HCCC--cCC---CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 0000 001 111223468899999999999999999999999999887543
No 137
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=5.1e-39 Score=354.07 Aligned_cols=275 Identities=26% Similarity=0.355 Sum_probs=217.3
Q ss_pred HHHHHHHhcCCcccCcccccCceEEEEEEE------cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEE
Q 002149 603 VQVLRNVTKNFASENELGRGGFGVVYKGEL------DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLL 675 (959)
Q Consensus 603 ~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 675 (959)
........++|++.+.||+|+||.||+|.. .+++.||||++... ......+.+.+|+.++.++ +||||++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC-CCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 334444567899999999999999999974 35688999998765 2445567899999999999 799999999
Q ss_pred EEEEeCc-eEEEEEEecCCCchhhHHhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 002149 676 GYSVAGY-ERLLVYEYMPQGALSKHIFHWKSL-----------NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDL 743 (959)
Q Consensus 676 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Di 743 (959)
+++.... ..++||||+++|+|.+++...... ....+++..++.++.|++.||+|||+ ++|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccC
Confidence 9987654 589999999999999999653221 01238999999999999999999999 89999999
Q ss_pred CCCCEEECCCCcEEEeeccccccCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 002149 744 KSSNILLGDDFRAKVSDFGLVKLAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDES 821 (959)
Q Consensus 744 k~~NiLl~~~~~~ki~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~ 821 (959)
||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999986544332 22334568899999999999999999999999999999998 99999876
Q ss_pred ChHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 822 RPEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
...+.. .. .+........ . ......+.+++.+||+.||.+||++.+++++|+.+++....
T Consensus 255 ~~~~~~--~~----------~~~~~~~~~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 314 (316)
T 2xir_A 255 KIDEEF--CR----------RLKEGTRMRA--P---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 314 (316)
T ss_dssp CCSHHH--HH----------HHHHTCCCCC--C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred chhHHH--HH----------HhccCccCCC--C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcc
Confidence 543211 10 0111000101 1 11223678999999999999999999999999999876543
No 138
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.6e-38 Score=345.63 Aligned_cols=260 Identities=27% Similarity=0.340 Sum_probs=208.3
Q ss_pred hcCCcccC-cccccCceEEEEEEE---cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEE
Q 002149 610 TKNFASEN-ELGRGGFGVVYKGEL---DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 610 ~~~~~~~~-~lG~G~fg~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 685 (959)
.++|.+.+ .||+|+||.||+|.+ .+++.||||++..........+.+.+|+++++.++||||+++++++ .....+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35677777 999999999999954 2467899999986544445577899999999999999999999998 566789
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+||||+++++|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 94 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEeCCCCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 999999999999998542 458999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCcce--eeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 766 LAPDSERSV--VTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 766 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+..... .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~---~-------- 234 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---E-------- 234 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH---H--------
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---H--------
Confidence 665443322 222456789999999998889999999999999999999 99999887654321111 0
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
.... .. ........+.+++.+||+.||++||++.++++.|+.++...
T Consensus 235 --~~~~--~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 235 --KGER--MG---CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp --TTCC--CC---CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred --cCCC--CC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 0000 00 11122346889999999999999999999999999988653
No 139
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=379.74 Aligned_cols=266 Identities=24% Similarity=0.344 Sum_probs=209.6
Q ss_pred CcccC-cccccCceEEEEEEEc---CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 613 FASEN-ELGRGGFGVVYKGELD---DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 613 ~~~~~-~lG~G~fg~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
+...+ .||+|+||.||+|.+. ++..||||+++... .....+.+.+|++++++++|||||++++++.. +..++||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 33344 7999999999999764 46679999997652 33456789999999999999999999999876 5689999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++.. ....+++..+..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+++...
T Consensus 415 E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 415 EMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp ECCTTCBHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EeCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 99999999999853 23569999999999999999999999 899999999999999999999999999998664
Q ss_pred CCCcce--eeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHH
Q 002149 769 DSERSV--VTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRA 845 (959)
Q Consensus 769 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (959)
...... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.... +. .
T Consensus 488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~---i~----------~ 554 (613)
T 2ozo_A 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF---IE----------Q 554 (613)
T ss_dssp --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHH---HH----------T
T ss_pred CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH---HH----------c
Confidence 432211 122345689999999999999999999999999999998 9999988765442111 10 0
Q ss_pred hcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCc
Q 002149 846 AIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEE 905 (959)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~ 905 (959)
. ..+... ......+.+++.+||+.||++||++.+|++.|+.+........+.+.+
T Consensus 555 ~--~~~~~p---~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~~~~s~ 609 (613)
T 2ozo_A 555 G--KRMECP---PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGGSA 609 (613)
T ss_dssp T--CCCCCC---TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSCCCSSS
T ss_pred C--CCCCCC---CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccccCCccc
Confidence 0 011111 123347889999999999999999999999999998877665554433
No 140
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.5e-38 Score=351.04 Aligned_cols=249 Identities=27% Similarity=0.399 Sum_probs=203.3
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.+.|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+++++.++||||+++++++......++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35688999999999999999975 5789999999875432 334457789999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+. |++.+++... ...+++.++..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 204 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204 (348)
T ss_dssp EECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred EecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence 99995 7888877542 2578999999999999999999999 89999999999999999999999999999865
Q ss_pred CCCCcceeeccccccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHH
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAV---TGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLR 844 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (959)
... ....||+.|+|||++. ...++.++|||||||++|||++|+.||......+..... .
T Consensus 205 ~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~-------------~ 266 (348)
T 1u5q_A 205 APA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-------------A 266 (348)
T ss_dssp SSB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-------------H
T ss_pred CCC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-------------H
Confidence 432 2357999999999984 567899999999999999999999999876543321100 0
Q ss_pred HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 002149 845 AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNV 888 (959)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 888 (959)
....+..... .....+.+++.+||+.||++|||+.+++++
T Consensus 267 ~~~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 267 QNESPALQSG----HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HSCCCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred hcCCCCCCCC----CCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1111111111 122357899999999999999999999873
No 141
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-38 Score=364.91 Aligned_cols=254 Identities=27% Similarity=0.412 Sum_probs=208.4
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccH-HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISK-KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
++|.+.+.||+|+||.||+|... +|+.||||++....... ...+.+.+|+.+++.++||||+++++++......++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57899999999999999999765 79999999987542211 23567889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 96 E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 96 EYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp ECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 99999999999843 2568999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCcceeeccccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKI-TTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
... .....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||......+... ...
T Consensus 168 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~----------------~i~ 229 (476)
T 2y94_A 168 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK----------------KIC 229 (476)
T ss_dssp TTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHH----------------HHH
T ss_pred ccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHH----------------HHh
Confidence 432 2344679999999999988765 689999999999999999999998765432211 111
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
+.....+. .....+.+++.+||+.||++|||+.++++ ++++..
T Consensus 230 ~~~~~~p~---~~s~~~~~Li~~~L~~dP~~Rpt~~eil~--hp~~~~ 272 (476)
T 2y94_A 230 DGIFYTPQ---YLNPSVISLLKHMLQVDPMKRATIKDIRE--HEWFKQ 272 (476)
T ss_dssp TTCCCCCT---TCCHHHHHHHHHHTCSSTTTSCCHHHHHT--CHHHHT
T ss_pred cCCcCCCc---cCCHHHHHHHHHHcCCCchhCcCHHHHHh--CHHhhh
Confidence 11111111 11236789999999999999999999987 455544
No 142
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=355.67 Aligned_cols=267 Identities=16% Similarity=0.188 Sum_probs=198.5
Q ss_pred hcCCcccCcccccCceEEEEEEEc----CCcEEEEEEcccccccHH---------HHHHHHHHHHHHHhcCCCCceeEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD----DGTKIAVKRMEAGVISKK---------AVDEFHSEIAVLSKVRHRHLVSLLG 676 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~ 676 (959)
.++|...+.||+|+||.||+|... ++..||||++........ ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999875 578899999875421111 1234667889999999999999999
Q ss_pred EEEe----CceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC
Q 002149 677 YSVA----GYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD 752 (959)
Q Consensus 677 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~ 752 (959)
++.. ....++||||+ +++|.+++... ..+++.+++.++.||+.||+|||+ ++|+||||||+|||++.
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEES
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEcc
Confidence 9988 77889999999 99999998542 378999999999999999999999 89999999999999988
Q ss_pred CC--cEEEeeccccccCCCCCc------ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChH
Q 002149 753 DF--RAKVSDFGLVKLAPDSER------SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPE 824 (959)
Q Consensus 753 ~~--~~ki~DfGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~ 824 (959)
++ .+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 266 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD 266 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence 77 999999999986543211 1123457999999999999999999999999999999999999999653222
Q ss_pred HHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhH
Q 002149 825 ERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLV 893 (959)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 893 (959)
..................+...... ......+.+++.+||+.||++||++.+|++.|+.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 267 PVAVQTAKTNLLDELPQSVLKWAPS--------GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHHHHHTTTHHHHHHSCT--------TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred cHHHHHHHHhhcccccHHHHhhccc--------cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 1111110000000001111111110 012236889999999999999999999999887653
No 143
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=9.1e-39 Score=359.39 Aligned_cols=256 Identities=16% Similarity=0.199 Sum_probs=209.1
Q ss_pred hcCCcccCcccccCceEEEEEE------EcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC---CCCceeEEEEEEe
Q 002149 610 TKNFASENELGRGGFGVVYKGE------LDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR---HRHLVSLLGYSVA 680 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 680 (959)
.++|.+.+.||+|+||.||+|. ..+++.||||++... ...++.+|+++++.++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 4678999999999999999993 456889999998753 2346778888888886 9999999999999
Q ss_pred CceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC--------
Q 002149 681 GYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD-------- 752 (959)
Q Consensus 681 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~-------- 752 (959)
.+..++||||+++|+|.+++...+......+++..++.++.||+.||+|||+ ++||||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999977555555789999999999999999999999 89999999999999998
Q ss_pred ---CCcEEEeeccccccCC-CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 002149 753 ---DFRAKVSDFGLVKLAP-DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQY 828 (959)
Q Consensus 753 ---~~~~ki~DfGla~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~ 828 (959)
++.+||+|||+|+... ...........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--- 292 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE--- 292 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---
Confidence 8999999999997543 122334456789999999999999999999999999999999999999986432211
Q ss_pred HHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCC-CCHHHHHHHHHHhHhhc
Q 002149 829 LAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQR-PDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Pt~~ev~~~L~~~~~~~ 896 (959)
..+....... .....+.+++..|++.+|.+| |++.++.+.|+.++...
T Consensus 293 ----------------~~~~~~~~~~----~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 ----------------CKPEGLFRRL----PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ----------------EEECSCCTTC----SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------eeechhcccc----CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 0011111111 113356789999999999998 67888888888888763
No 144
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=346.86 Aligned_cols=269 Identities=21% Similarity=0.274 Sum_probs=200.8
Q ss_pred HhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEccccccc---HHHHHHHHHHHHHHHhcC---CCCceeEEEEEEeC
Q 002149 609 VTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVIS---KKAVDEFHSEIAVLSKVR---HRHLVSLLGYSVAG 681 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 681 (959)
+.++|++.+.||+|+||.||+|.. .+++.||||++...... ......+.+|+++++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999975 57899999998743211 111245667777777764 99999999999875
Q ss_pred c-----eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcE
Q 002149 682 Y-----ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRA 756 (959)
Q Consensus 682 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ 756 (959)
. ..++||||+. |+|.+++... ....+++.++..++.||+.||+|||+ ++|+||||||+||+++.++.+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKA---PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTC---CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCE
Confidence 5 5789999995 7999998542 22459999999999999999999999 899999999999999999999
Q ss_pred EEeeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhh
Q 002149 757 KVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNI 836 (959)
Q Consensus 757 ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~ 836 (959)
||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+...........
T Consensus 160 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 237 (308)
T 3g33_A 160 KLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 237 (308)
T ss_dssp EECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred EEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999998664332 234567999999999999999999999999999999999999999887654432211111000
Q ss_pred hcchHHHHHhcC---Cccc-CCCCC-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 837 KSDKEKLRAAID---PILE-VNDDT-----FETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 837 ~~~~~~~~~~~~---~~~~-~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
.. ......... .... ..... ......+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 238 PP-EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CC-TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CC-hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 000000000 0000 00000 012246789999999999999999999987
No 145
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=9.8e-39 Score=355.32 Aligned_cols=250 Identities=24% Similarity=0.303 Sum_probs=204.3
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 686 (959)
.++|+..+.||+|+||.||+|+.. +++.||||++.+... .....+.+.+|..++..+ +||||+++++++.+....++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 468999999999999999999875 478999999876422 123356678899999988 79999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||||+++|+|.+++... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 99 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99999999999998642 458999999999999999999999 8999999999999999999999999999985
Q ss_pred CCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... +
T Consensus 171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~------i---------- 233 (353)
T 2i0e_A 171 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS------I---------- 233 (353)
T ss_dssp CCCTT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------H----------
T ss_pred cccCC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHH------H----------
Confidence 43222 223456899999999999999999999999999999999999999987654332110 1
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCC-----HHHHHH
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRPD-----MGHAVN 887 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~ 887 (959)
.......+ ......+.+++.+||+.||++||+ +.++++
T Consensus 234 ~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 234 MEHNVAYP---KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HHCCCCCC---TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HhCCCCCC---CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 01111111 112346789999999999999995 466655
No 146
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.1e-38 Score=350.52 Aligned_cols=255 Identities=24% Similarity=0.340 Sum_probs=197.3
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc----e
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY----E 683 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~ 683 (959)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .......+.+|+++++.++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999975 5789999999976532 3345677899999999999999999999987654 3
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccc
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGL 763 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGl 763 (959)
.++||||+++|+|.+++... ..+++.+++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 162 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGI 162 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred cEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence 49999999999999998642 468999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCc--ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchH
Q 002149 764 VKLAPDSER--SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKE 841 (959)
Q Consensus 764 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 841 (959)
++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+..... .......
T Consensus 163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~--~~~~~~~-- 238 (311)
T 3ork_A 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH--VREDPIP-- 238 (311)
T ss_dssp C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHCCCCC--
T ss_pred cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--hcCCCCC--
Confidence 986544322 1223457999999999999999999999999999999999999999887654421110 1000000
Q ss_pred HHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 842 KLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
.... .......+.+++.+||+.||++||++.++++
T Consensus 239 --~~~~---------~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 239 --PSAR---------HEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp --HHHH---------STTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred --cccc---------cCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 0000 0011236789999999999999998877755
No 147
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6.8e-39 Score=354.07 Aligned_cols=267 Identities=28% Similarity=0.424 Sum_probs=214.5
Q ss_pred HHhcCCcccCcccccCceEEEEEEEc------CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC
Q 002149 608 NVTKNFASENELGRGGFGVVYKGELD------DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG 681 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 681 (959)
...++|+..+.||+|+||.||+|... +++.||||++... ........+.+|+++++.++||||+++++++.+.
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 34568999999999999999999654 3678999998754 2445566789999999999999999999999999
Q ss_pred ceEEEEEEecCCCchhhHHhhccc-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcE
Q 002149 682 YERLLVYEYMPQGALSKHIFHWKS-----LNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRA 756 (959)
Q Consensus 682 ~~~~lv~e~~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ 756 (959)
...++||||+++|+|.+++..... .....+++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeE
Confidence 999999999999999999865321 112467999999999999999999999 899999999999999999999
Q ss_pred EEeeccccccCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHH
Q 002149 757 KVSDFGLVKLAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFW 834 (959)
Q Consensus 757 ki~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~ 834 (959)
||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |..||......+.... +.
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~---~~ 254 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF---VM 254 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHH---HH
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHH---HH
Confidence 9999999985533221 11223467889999999999999999999999999999999 8999987654332111 10
Q ss_pred hhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 835 NIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
.... ..........+.+++.+|++.||++||++.++++.|+..+..+
T Consensus 255 -------------~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 255 -------------EGGL--LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp -------------TTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred -------------cCCc--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 0000 0011122346889999999999999999999999998776543
No 148
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.9e-39 Score=355.03 Aligned_cols=274 Identities=25% Similarity=0.404 Sum_probs=200.3
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHH--HHhcCCCCceeEEEEEEe-----Cc
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAV--LSKVRHRHLVSLLGYSVA-----GY 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~ 682 (959)
.++|+..+.||+|+||.||+|+. +++.||||++... ....+..|.++ +..++||||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 36789999999999999999976 5899999998643 12334444444 445899999999986543 23
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC---------CeEecCCCCCCEEECCC
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQ---------SFIHRDLKSSNILLGDD 753 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~---------~ivH~Dik~~NiLl~~~ 753 (959)
..++||||+++|+|.+++.. ...++..++.++.||+.||+|||+ . +|+||||||+|||++.+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~ 156 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKND 156 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred eEEEEEecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCC
Confidence 66899999999999999954 345899999999999999999999 6 99999999999999999
Q ss_pred CcEEEeeccccccCCCCC-------cceeecccccccccccccccc-------CCCCccchHHHHHHHHHHHHhCCCCCC
Q 002149 754 FRAKVSDFGLVKLAPDSE-------RSVVTRLAGTFGYLAPEYAVT-------GKITTKVDVFSFGVVLMELLTGLMALD 819 (959)
Q Consensus 754 ~~~ki~DfGla~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~ll~elltg~~p~~ 819 (959)
+.+||+|||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||.
T Consensus 157 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~ 236 (336)
T 3g2f_A 157 GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLF 236 (336)
T ss_dssp SCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGS
T ss_pred CcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCC
Confidence 999999999998654321 112234579999999999977 456778999999999999999977764
Q ss_pred CCChHHH-HH-HHHHHHhhhcchHHHHHhcC-----Cccc-CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 002149 820 ESRPEER-QY-LAAWFWNIKSDKEKLRAAID-----PILE-VNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAP 891 (959)
Q Consensus 820 ~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 891 (959)
....... .. ...... ...........+. +... ...........+.+++.+||+.||++|||+.|+++.|+.
T Consensus 237 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 237 PGESVPEYQMAFQTEVG-NHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp TTSCCCCCCCTTHHHHC-SSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred CccchhHHHHhhhcccC-CCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 3221100 00 000000 0000011111111 1111 111223455679999999999999999999999999999
Q ss_pred hHhhcCCC
Q 002149 892 LVEKWKPL 899 (959)
Q Consensus 892 ~~~~~~~~ 899 (959)
++..|...
T Consensus 316 ll~~~~~~ 323 (336)
T 3g2f_A 316 LMMIWERN 323 (336)
T ss_dssp HHHCCCC-
T ss_pred HHHHHHhc
Confidence 99988763
No 149
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.2e-38 Score=350.88 Aligned_cols=273 Identities=21% Similarity=0.352 Sum_probs=213.5
Q ss_pred HHHHHHHhcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHh--cCCCCceeEEEEEEe
Q 002149 603 VQVLRNVTKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSK--VRHRHLVSLLGYSVA 680 (959)
Q Consensus 603 ~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~ 680 (959)
......+.++|...+.||+|+||.||+|... |+.||||++... ..+.+.+|++++.. ++||||+++++++..
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 3444566789999999999999999999875 899999998643 34567889999988 689999999999988
Q ss_pred Cc----eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCCE
Q 002149 681 GY----ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLH--------SLAHQSFIHRDLKSSNI 748 (959)
Q Consensus 681 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dik~~Ni 748 (959)
.. ..++||||+++|+|.+++.. ..+++.+++.++.|++.||+||| + .+|+||||||+||
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NI 178 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNI 178 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGE
T ss_pred cCCccceeEEEEeecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHE
Confidence 76 78999999999999999954 45899999999999999999999 6 8999999999999
Q ss_pred EECCCCcEEEeeccccccCCCCCcc---eeeccccccccccccccccC------CCCccchHHHHHHHHHHHHhC-----
Q 002149 749 LLGDDFRAKVSDFGLVKLAPDSERS---VVTRLAGTFGYLAPEYAVTG------KITTKVDVFSFGVVLMELLTG----- 814 (959)
Q Consensus 749 Ll~~~~~~ki~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlG~ll~elltg----- 814 (959)
+++.++.+||+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 179 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 258 (342)
T 1b6c_B 179 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 258 (342)
T ss_dssp EECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTT
T ss_pred EECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCC
Confidence 9999999999999999865443322 22345799999999998775 344789999999999999999
Q ss_pred -----CCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 002149 815 -----LMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVL 889 (959)
Q Consensus 815 -----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 889 (959)
..||......+... ..+.... ......+.+............+.+++.+||+.||++||++.+|+++|
T Consensus 259 ~~~~~~~p~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 331 (342)
T 1b6c_B 259 IHEDYQLPYYDLVPSDPSV-EEMRKVV------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 331 (342)
T ss_dssp BCCCCCCTTTTTSCSSCCH-HHHHHHH------TTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred cccccccCccccCcCcccH-HHHHHHH------HHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 77886543221100 0000000 00111111111112335667899999999999999999999999999
Q ss_pred HHhHhhcC
Q 002149 890 APLVEKWK 897 (959)
Q Consensus 890 ~~~~~~~~ 897 (959)
+.+.++..
T Consensus 332 ~~i~~~~~ 339 (342)
T 1b6c_B 332 SQLSQQEG 339 (342)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHhc
Confidence 99987654
No 150
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=354.97 Aligned_cols=304 Identities=22% Similarity=0.324 Sum_probs=225.0
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCce-----
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE----- 683 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 683 (959)
.++|...+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 46799999999999999999976 468999999997765556667889999999999999999999999987643
Q ss_pred -EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 684 -RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 684 -~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
.++||||+. |+|.+++. ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 103 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred eEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecc
Confidence 499999995 78877662 358999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchH
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKE 841 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 841 (959)
+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+..... .........
T Consensus 172 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i--~~~~~~~~~ 245 (353)
T 3coi_A 172 LARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI--LKVTGVPGT 245 (353)
T ss_dssp CTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHH--HHHHCBCCH
T ss_pred cccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHHhCCCCH
Confidence 99865332 234578999999999877 67899999999999999999999999887654332211 111000000
Q ss_pred H---------HHHhc---CCccc--CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCCCCCccc
Q 002149 842 K---------LRAAI---DPILE--VNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDDEPEEYS 907 (959)
Q Consensus 842 ~---------~~~~~---~~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~ 907 (959)
. ....+ ..... ...........+.+++.+||..||++|||+.++++ +++++.+..++.++....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~--hp~f~~~~~~~~~~~~~~ 323 (353)
T 3coi_A 246 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT--HPFFEPFRDPEEETEAQQ 323 (353)
T ss_dssp HHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT--SGGGTTTCCGGGCCCCSS
T ss_pred HHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc--CcchhhccCccccccCCC
Confidence 0 00111 00000 01111123457889999999999999999999987 778877666555444433
Q ss_pred CcccCCC-hhhhHHHHHHhhCCCcce
Q 002149 908 GIDYSLP-LNQMVKDWQEAEGKDLSY 932 (959)
Q Consensus 908 ~~~~~~~-~~~~~~~~~~~~~~~~~~ 932 (959)
.++.... .....++|++....+...
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (353)
T 3coi_A 324 PFDDSLEHEKLTVDEWKQHIYKEIVN 349 (353)
T ss_dssp CCCCTTTTCCCCHHHHHHHHHHHHHT
T ss_pred CCccchhhccCCHHHHHHHHHHHHHh
Confidence 3333222 245667888776554443
No 151
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1e-38 Score=353.17 Aligned_cols=267 Identities=24% Similarity=0.328 Sum_probs=211.2
Q ss_pred HHHHHhcCCccc-CcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeC
Q 002149 605 VLRNVTKNFASE-NELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAG 681 (959)
Q Consensus 605 ~~~~~~~~~~~~-~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 681 (959)
..+.+.++|.+. +.||+|+||.||+|... +++.||||++............+.+|+.+++.+ +||||+++++++.+.
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~ 101 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence 345666778887 88999999999999765 689999999987654455567889999999999 479999999999999
Q ss_pred ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---CCcEEE
Q 002149 682 YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD---DFRAKV 758 (959)
Q Consensus 682 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~---~~~~ki 758 (959)
...++||||+++|+|.+++.. .....+++.+++.++.|++.||+|||+ ++|+||||||+||+++. ++.+||
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL 175 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLP---ELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKI 175 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSS---CC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEE
T ss_pred CeEEEEEEecCCCcHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEE
Confidence 999999999999999998843 223679999999999999999999999 89999999999999988 789999
Q ss_pred eeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhc
Q 002149 759 SDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKS 838 (959)
Q Consensus 759 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 838 (959)
+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+...... ..
T Consensus 176 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~~-- 248 (327)
T 3lm5_A 176 VDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS---QV-- 248 (327)
T ss_dssp CCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HT--
T ss_pred eeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHH---hc--
Confidence 9999998664432 2234579999999999999999999999999999999999999998766543211110 00
Q ss_pred chHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 839 DKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
..... ..........+.+++.+||+.||++|||++++++ +++++.+
T Consensus 249 -------~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~--h~~~~~~ 294 (327)
T 3lm5_A 249 -------NVDYS---EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS--HSWLQQW 294 (327)
T ss_dssp -------CCCCC---TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT--CGGGCCC
T ss_pred -------ccccC---chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC--CHhhccc
Confidence 00000 0111122346789999999999999999999976 4555443
No 152
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.5e-38 Score=354.38 Aligned_cols=288 Identities=21% Similarity=0.245 Sum_probs=211.9
Q ss_pred cHHHHHHHhcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccc---------cHHHHHHHHHHHHHHHhcCCCCce
Q 002149 602 SVQVLRNVTKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVI---------SKKAVDEFHSEIAVLSKVRHRHLV 672 (959)
Q Consensus 602 ~~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~~E~~~l~~l~h~niv 672 (959)
..+++..+.++|...+.||+|+||.||+|...+|+.||||++..... .....+.+.+|+++++.++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 45678888999999999999999999999888899999999865322 223347899999999999999999
Q ss_pred eEEEEEEeC-----ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 002149 673 SLLGYSVAG-----YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSN 747 (959)
Q Consensus 673 ~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~N 747 (959)
++++++... ...++||||++ |+|.+++.. ....+++..+..++.||+.||+|||+ .+|+||||||+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~N 164 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD----QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGN 164 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHH
Confidence 999998543 36799999996 788888753 23579999999999999999999999 899999999999
Q ss_pred EEECCCCcEEEeeccccccCCCCCcceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHH
Q 002149 748 ILLGDDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEER 826 (959)
Q Consensus 748 iLl~~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~ 826 (959)
|+++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 242 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242 (362)
T ss_dssp EEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred EEEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999999999999999998543322 2334578999999999877 6789999999999999999999999988765443
Q ss_pred HHHHHHHHhhhc-------chHHHHHhcCCccc-CCCCCH-----HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhH
Q 002149 827 QYLAAWFWNIKS-------DKEKLRAAIDPILE-VNDDTF-----ETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLV 893 (959)
Q Consensus 827 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 893 (959)
............ ........+..... ...... .....+.+++.+||+.||++|||+.|+++ ++++
T Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~f 320 (362)
T 3pg1_A 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR--HPYF 320 (362)
T ss_dssp HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT--SGGG
T ss_pred HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc--Cchh
Confidence 221111000000 00111122211111 011111 11235789999999999999999999987 7777
Q ss_pred hhcCCCCC
Q 002149 894 EKWKPLDD 901 (959)
Q Consensus 894 ~~~~~~~~ 901 (959)
+....+.+
T Consensus 321 ~~~~~~~~ 328 (362)
T 3pg1_A 321 ESLFDPLD 328 (362)
T ss_dssp TTTCCGGG
T ss_pred hhccCccc
Confidence 76654433
No 153
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.6e-38 Score=339.02 Aligned_cols=253 Identities=24% Similarity=0.343 Sum_probs=184.9
Q ss_pred cCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccH-HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISK-KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
++|++.+.||+|+||.||+|.. .+++.||+|++....... ...+.+.+|+++++.++||||+++++++.+....++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999975 478999999987653322 33567889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+ ++++.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 93 e~~-~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 93 EYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred hhc-CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceecc
Confidence 999 7888887743 2568999999999999999999999 899999999999999999999999999998654
Q ss_pred CCCcceeeccccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKI-TTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
... ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||............ ....
T Consensus 164 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-------------~~~~ 228 (275)
T 2eue_A 164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI-------------SNGV 228 (275)
T ss_dssp -------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-------------HHTC
T ss_pred Ccc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-------------HhCC
Confidence 432 2234578999999999988765 68999999999999999999999876543321110 0000
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
..... .....+.+++.+||+.||++|||+.|+++ +++++.
T Consensus 229 ---~~~~~---~~~~~~~~li~~~l~~dP~~Rps~~e~l~--h~~f~~ 268 (275)
T 2eue_A 229 ---YTLPK---FLSPGAAGLIKRMLIVNPLNRISIHEIMQ--DDWFKV 268 (275)
T ss_dssp ---CCCCT---TSCHHHHHHHHHHSCSSGGGSCCHHHHTT--CHHHHT
T ss_pred ---CCCCc---cCCHHHHHHHHHHhhcCHhHCCCHHHHhh--CCeecc
Confidence 00011 12235789999999999999999999987 455543
No 154
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=8e-39 Score=355.29 Aligned_cols=266 Identities=26% Similarity=0.382 Sum_probs=213.1
Q ss_pred hcCCcccCcccccCceEEEEEEEcC-C-----cEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCc
Q 002149 610 TKNFASENELGRGGFGVVYKGELDD-G-----TKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGY 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 682 (959)
.++|...+.||+|+||.||+|.... + ..||+|.+.... .....+.+.+|+.+++.+ +||||+++++++....
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 4678999999999999999997642 2 479999987642 345567899999999999 8999999999999999
Q ss_pred eEEEEEEecCCCchhhHHhhcccC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSL---------NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDD 753 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~ 753 (959)
..++||||+++|+|.+++...... ....+++..++.++.||+.||+|||+ ++|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCC
Confidence 999999999999999998653211 12468999999999999999999999 899999999999999999
Q ss_pred CcEEEeeccccccCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 002149 754 FRAKVSDFGLVKLAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAA 831 (959)
Q Consensus 754 ~~~ki~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~ 831 (959)
+.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |..||.......... .
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~--~ 278 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY--K 278 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH--H
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH--H
Confidence 9999999999985433222 22334567889999999999999999999999999999999 999998765433211 1
Q ss_pred HHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 832 WFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
. ......... . ......+.+++.+||+.||.+||++.++++.|+.+....
T Consensus 279 ~----------~~~~~~~~~--~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 279 L----------VKDGYQMAQ--P---AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp H----------HHHTCCCCC--C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred H----------HhcCCCCCC--C---CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 0 111111110 1 111346789999999999999999999999999887643
No 155
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=352.57 Aligned_cols=259 Identities=27% Similarity=0.403 Sum_probs=202.3
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcE----EEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTK----IAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYER 684 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 684 (959)
.++|+..+.||+|+||.||+|... +++. ||+|.+... ......+.+.+|+.+++.++||||+++++++..+. .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 357999999999999999999754 4554 577766543 23345678899999999999999999999998765 7
Q ss_pred EEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccc
Q 002149 685 LLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLV 764 (959)
Q Consensus 685 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla 764 (959)
++|+||+.+|+|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 92 ~~v~~~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a 164 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp EEEECCCSSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred eEEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence 8999999999999998652 2568999999999999999999999 89999999999999999999999999999
Q ss_pred ccCCCCCc-ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 765 KLAPDSER-SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 765 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
+....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+......
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~----------- 233 (327)
T 3lzb_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE----------- 233 (327)
T ss_dssp ---------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----------
T ss_pred eEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----------
Confidence 86543322 22233457889999999999999999999999999999999 999998876544321110
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
... ... ........+.+++.+||+.||.+||++.|+++.|..+...
T Consensus 234 --~~~--~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 234 --KGE--RLP---QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp --TTC--CCC---CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred --cCC--CCC---CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 000 000 1111233678999999999999999999999999988753
No 156
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.3e-38 Score=379.02 Aligned_cols=253 Identities=27% Similarity=0.351 Sum_probs=204.1
Q ss_pred CcccccCceEEEEEEEc---CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEEecCC
Q 002149 617 NELGRGGFGVVYKGELD---DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYEYMPQ 693 (959)
Q Consensus 617 ~~lG~G~fg~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 693 (959)
+.||+|+||.||+|.+. +++.||||+++.........+++.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 46789999998765555567889999999999999999999999865 457899999999
Q ss_pred CchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCCCCc-
Q 002149 694 GALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDSER- 772 (959)
Q Consensus 694 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~~~~- 772 (959)
|+|.+++.. ...+++..++.++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+++.......
T Consensus 454 g~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999954 2568999999999999999999999 8999999999999999999999999999986644332
Q ss_pred -ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCCc
Q 002149 773 -SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDPI 850 (959)
Q Consensus 773 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (959)
.......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+..... .... .
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i-------------~~~~--~ 590 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-------------EKGE--R 590 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-------------HTTC--C
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------HcCC--C
Confidence 12233457889999999999999999999999999999998 99999887654422111 0000 0
Q ss_pred ccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 851 LEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 851 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
.. ........+.+++.+||+.||++||++.+|++.|+.++.+.
T Consensus 591 ~~---~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 591 MG---CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp CC---CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CC---CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 11 11122346889999999999999999999999999987654
No 157
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=358.12 Aligned_cols=261 Identities=30% Similarity=0.414 Sum_probs=199.3
Q ss_pred CCcccCcccccCceEEEEEEEc--CC--cEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe-CceEEE
Q 002149 612 NFASENELGRGGFGVVYKGELD--DG--TKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA-GYERLL 686 (959)
Q Consensus 612 ~~~~~~~lG~G~fg~V~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~l 686 (959)
.|...+.||+|+||.||+|... ++ ..||||.+... ......+.+.+|+.++++++||||+++++++.. ....++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 4667789999999999999753 22 36899988753 344567789999999999999999999998754 457799
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||||+++|+|.+++.. ....+++..++.++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 169 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEECCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEECCCCCCHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccc
Confidence 9999999999999854 22568899999999999999999999 8999999999999999999999999999985
Q ss_pred CCCCCcc---eeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 767 APDSERS---VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 767 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
....... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||......+.... +.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~---~~-------- 310 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LL-------- 310 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHH---HH--------
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHH---HH--------
Confidence 5432211 1233567889999999999999999999999999999999 6778876544332110 00
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
.. .....+ ......+.+++.+||+.||++||++.++++.|+.++..+..
T Consensus 311 --~~--~~~~~p---~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 311 --QG--RRLLQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp --TT--CCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred --cC--CCCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 00 000101 11234688999999999999999999999999999987654
No 158
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-39 Score=362.30 Aligned_cols=254 Identities=25% Similarity=0.324 Sum_probs=202.4
Q ss_pred hcCCcccCcccccCceEEEEEEE----cCCcEEEEEEcccccc--cHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCc
Q 002149 610 TKNFASENELGRGGFGVVYKGEL----DDGTKIAVKRMEAGVI--SKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGY 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 682 (959)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .....+.+.+|+++++.+ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999986 4789999999875422 112334567899999999 6999999999999999
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG 204 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFG 204 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred eEEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCC
Confidence 999999999999999998642 468999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcceeecccccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHHhhhcc
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAVT--GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQ-YLAAWFWNIKSD 839 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~ 839 (959)
+++..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .+..
T Consensus 205 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~-------- 276 (355)
T 1vzo_A 205 LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR-------- 276 (355)
T ss_dssp EEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH--------
T ss_pred CCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHH--------
Confidence 998665444434455689999999999986 35789999999999999999999999754322111 1111
Q ss_pred hHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHH
Q 002149 840 KEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRP-----DMGHAVN 887 (959)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 887 (959)
........ ........+.+++.+||..||++|| ++.++++
T Consensus 277 -----~~~~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 277 -----RILKSEPP---YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp -----HHHHCCCC---CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred -----HHhccCCC---CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 00001111 1111234678999999999999999 8999877
No 159
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.4e-38 Score=351.21 Aligned_cols=274 Identities=19% Similarity=0.282 Sum_probs=207.4
Q ss_pred cCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe--------C
Q 002149 611 KNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA--------G 681 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 681 (959)
++|++.+.||+|+||.||+|.. .+|+.||||++............+.+|+++++.++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5799999999999999999976 578999999987654444445677899999999999999999999887 3
Q ss_pred ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeec
Q 002149 682 YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDF 761 (959)
Q Consensus 682 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~Df 761 (959)
...++||||++ |++.+.+.. ....+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+||
T Consensus 97 ~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 97 GSIYLVFDFCE-HDLAGLLSN----VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp CEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred ceEEEEEeccC-CCHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccc
Confidence 46899999995 577777743 22569999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCC---cceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhh
Q 002149 762 GLVKLAPDSE---RSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIK 837 (959)
Q Consensus 762 Gla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 837 (959)
|+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+............
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 248 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 248 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9998654322 122344678999999999876 458999999999999999999999999877655433222111110
Q ss_pred cchHHHHH-----hcCCc--ccCCCCCHH-H------HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 838 SDKEKLRA-----AIDPI--LEVNDDTFE-T------FWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 838 ~~~~~~~~-----~~~~~--~~~~~~~~~-~------~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
. ...... ..+.. ......... . ...+.+++.+||+.||++|||+.|+++ ++++..
T Consensus 249 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~f~~ 317 (351)
T 3mi9_A 249 T-PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN--HDFFWS 317 (351)
T ss_dssp C-TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGGS
T ss_pred C-hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC--CCCcCC
Confidence 0 000000 00000 000000111 1 234779999999999999999999987 566543
No 160
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.4e-38 Score=343.84 Aligned_cols=256 Identities=20% Similarity=0.312 Sum_probs=206.8
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe--CceEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA--GYERLL 686 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 686 (959)
.++|+..+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 367899999999999999999765 78999999998765566677889999999999999999999998764 568899
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEecCCCCCCEEECCCCcEEEeec
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQS-----FIHRDLKSSNILLGDDFRAKVSDF 761 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivH~Dik~~NiLl~~~~~~ki~Df 761 (959)
||||+++|+|.+++..... ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+||
T Consensus 85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999876432 23568999999999999999999999 56 999999999999999999999999
Q ss_pred cccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchH
Q 002149 762 GLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKE 841 (959)
Q Consensus 762 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 841 (959)
|+++....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+.... +
T Consensus 161 g~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---i-------- 228 (279)
T 2w5a_A 161 GLARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK---I-------- 228 (279)
T ss_dssp CHHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---H--------
T ss_pred chheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHH---H--------
Confidence 99986544321 12335789999999999999999999999999999999999999987754332110 1
Q ss_pred HHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 002149 842 KLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNV 888 (959)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 888 (959)
.......+ .......+.+++.+||+.||++||++.++++.
T Consensus 229 --~~~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 268 (279)
T 2w5a_A 229 --REGKFRRI-----PYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268 (279)
T ss_dssp --HHTCCCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --hhcccccC-----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 01000011 11123468899999999999999999999873
No 161
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.8e-38 Score=337.64 Aligned_cols=257 Identities=24% Similarity=0.294 Sum_probs=207.0
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
+.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+....++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 4567999999999999999999765 57789999987642 23356789999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCcEEEeecccc
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL---GDDFRAKVSDFGLV 764 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl---~~~~~~ki~DfGla 764 (959)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||++
T Consensus 85 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 85 MELCTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EeccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 9999999999988542 458999999999999999999999 899999999999999 78899999999999
Q ss_pred ccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHH
Q 002149 765 KLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLR 844 (959)
Q Consensus 765 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (959)
....... ......||+.|+|||++.+ .++.++||||||+++|||++|+.||......+..... ............
T Consensus 157 ~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~ 231 (277)
T 3f3z_A 157 ARFKPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI--REGTFTFPEKDW 231 (277)
T ss_dssp EECCTTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHCCCCCCHHHH
T ss_pred eeccCcc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH--HhCCCCCCchhh
Confidence 8665432 2344579999999998865 4899999999999999999999999876654321111 000000000000
Q ss_pred HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 845 AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
......+.+++.+|++.||++||++.++++ ++++++
T Consensus 232 -------------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~--h~~~~~ 267 (277)
T 3f3z_A 232 -------------LNVSPQAESLIRRLLTKSPKQRITSLQALE--HEWFEK 267 (277)
T ss_dssp -------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHTT--SHHHHH
T ss_pred -------------hcCCHHHHHHHHHHccCChhhCcCHHHHhc--CHHHhc
Confidence 011236789999999999999999999987 455543
No 162
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.3e-38 Score=348.39 Aligned_cols=264 Identities=30% Similarity=0.448 Sum_probs=209.2
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEE--EEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKI--AVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~v--avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 686 (959)
++|+..+.||+|+||.||+|... +++.+ |||.+... ......+.+.+|+++++++ +||||+++++++.+....++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 57889999999999999999654 56644 99988753 2344566789999999999 89999999999999999999
Q ss_pred EEEecCCCchhhHHhhccc-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCc
Q 002149 687 VYEYMPQGALSKHIFHWKS-----------LNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFR 755 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~ 755 (959)
||||+++|+|.+++..... .....+++.+++.++.||+.||+|||+ ++|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCe
Confidence 9999999999999865321 123579999999999999999999999 89999999999999999999
Q ss_pred EEEeeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHH
Q 002149 756 AKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFW 834 (959)
Q Consensus 756 ~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~ 834 (959)
+||+|||+++...... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||......+...
T Consensus 181 ~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~------ 252 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE------ 252 (327)
T ss_dssp EEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH------
T ss_pred EEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHH------
Confidence 9999999997432211 1223457889999999998889999999999999999998 999998776533211
Q ss_pred hhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 835 NIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
. +...... .........+.+++.+||+.||++||++.++++.|..++++...
T Consensus 253 ~-------~~~~~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 253 K-------LPQGYRL-----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp H-------GGGTCCC-----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred H-------hhcCCCC-----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 0 1111111 11112234688999999999999999999999999999887544
No 163
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=359.62 Aligned_cols=278 Identities=20% Similarity=0.249 Sum_probs=213.7
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc--eEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY--ERLL 686 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 686 (959)
.++|.+.+.||+|+||.||+|... +|+.||||++.... .....+.+.+|+++++.++||||+++++++.... ..++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 357899999999999999999765 58999999987542 2233567789999999999999999999998765 7799
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE----CCCCcEEEeecc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL----GDDFRAKVSDFG 762 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl----~~~~~~ki~DfG 762 (959)
||||+++|+|.+++..... ...+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||
T Consensus 87 v~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EECCCTTEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEecCCCCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 9999999999999865322 2348999999999999999999999 899999999999999 778889999999
Q ss_pred ccccCCCCCcceeecccccccccccccccc--------CCCCccchHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHH
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAVT--------GKITTKVDVFSFGVVLMELLTGLMALDESRPEE--RQYLAAW 832 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~--~~~~~~~ 832 (959)
+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ...+...
T Consensus 162 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~ 239 (396)
T 4eut_A 162 AARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (396)
T ss_dssp GCEECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHH
T ss_pred CceEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHH
Confidence 998765432 2334679999999999865 567889999999999999999999997543211 1111111
Q ss_pred HHhhhcc--------hHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 833 FWNIKSD--------KEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 833 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
....... ......+.................+.+++.+||..||++||++.++++.+..++.+
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 1100000 00000000011111223456677888999999999999999999999999998875
No 164
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.6e-38 Score=346.40 Aligned_cols=254 Identities=23% Similarity=0.321 Sum_probs=206.7
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccH----HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCce
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISK----KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE 683 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 683 (959)
+.++|++.+.||+|+||.||+|... +|+.||||++....... ...+.+.+|+.+++.++||||+++++++.+...
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3467999999999999999999765 68999999987643221 135678999999999999999999999999999
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC----cEEEe
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF----RAKVS 759 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~----~~ki~ 759 (959)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~ 161 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (321)
T ss_dssp EEEEECCCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEc
Confidence 9999999999999999853 2568999999999999999999999 8999999999999999887 79999
Q ss_pred eccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD 839 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 839 (959)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... +.....
T Consensus 162 Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---i~~~~~- 235 (321)
T 2a2a_A 162 DFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN---ITSVSY- 235 (321)
T ss_dssp CCTTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH---HHTTCC-
T ss_pred cCccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHH---HHhccc-
Confidence 999998665432 22445799999999999999999999999999999999999999987654332111 000000
Q ss_pred hHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 840 KEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
.....+. . .....+.+++.+|++.||++|||+.++++
T Consensus 236 --~~~~~~~-----~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 --DFDEEFF-----S----HTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --CCCHHHH-----T----TCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --ccChhhh-----c----ccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000000 0 11235789999999999999999999987
No 165
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4e-38 Score=343.84 Aligned_cols=262 Identities=30% Similarity=0.406 Sum_probs=206.8
Q ss_pred cCCcccCcccccCceEEEEEEEcC----CcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEE-eCceEE
Q 002149 611 KNFASENELGRGGFGVVYKGELDD----GTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSV-AGYERL 685 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~ 685 (959)
.+|+..+.||+|+||.||+|...+ ...||+|.+... ......+.+.+|+.++++++||||+++++++. .....+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 468888999999999999997542 235899988753 34556678999999999999999999999865 456789
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp EEEECCTTCBHHHHHHC----TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred EEEeCCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccc
Confidence 99999999999999854 23568999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCc---ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchH
Q 002149 766 LAPDSER---SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKE 841 (959)
Q Consensus 766 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 841 (959)
....... .......||+.|+|||.+.+..++.++||||||+++|||++ |..||......+.....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~----------- 245 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL----------- 245 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHH-----------
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH-----------
Confidence 6544321 12234567889999999999999999999999999999999 56666655433221100
Q ss_pred HHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 842 KLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
...... .. . ......+.+++.+|++.||++||++.++++.|++++..+..
T Consensus 246 --~~~~~~-~~-~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 246 --LQGRRL-LQ-P---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp --HTTCCC-CC-C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred --hcCCCC-CC-C---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 000000 00 1 11223688999999999999999999999999999886544
No 166
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.2e-38 Score=349.03 Aligned_cols=271 Identities=22% Similarity=0.340 Sum_probs=207.0
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|+..+.||+|+||.||+|... +|+.||||++..........+.+.+|+++++.++||||+++++++.+....++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357999999999999999999765 5899999998766555666777889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 104 e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 104 EFVDHTILDDLELF-----PNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp ECCSEEHHHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecCCcchHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 99999988887632 2468999999999999999999999 899999999999999999999999999998654
Q ss_pred CCCcceeeccccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHH--
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTG-KITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRA-- 845 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 845 (959)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+......... .........
T Consensus 176 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 252 (331)
T 4aaa_A 176 APGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCL--GNLIPRHQELF 252 (331)
T ss_dssp ---------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH--CSCCHHHHHHH
T ss_pred CCcc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh--CCCChhhhhHh
Confidence 3222 23345789999999999875 78999999999999999999999998876544322211110 000000000
Q ss_pred --------hcCCcccCCCCC-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 846 --------AIDPILEVNDDT-----FETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 846 --------~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
...+... .... ......+.+++.+||+.||++|||+.|+++ +++++
T Consensus 253 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~--hp~f~ 311 (331)
T 4aaa_A 253 NKNPVFAGVRLPEIK-EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH--HDFFQ 311 (331)
T ss_dssp HHCGGGTTCCCCCCS-SCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG--SHHHH
T ss_pred hhccccccccCcccc-ccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc--Cchhc
Confidence 0000000 0000 012346889999999999999999999987 44444
No 167
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.6e-38 Score=350.90 Aligned_cols=256 Identities=21% Similarity=0.297 Sum_probs=181.9
Q ss_pred cCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC-CCCceeEEEEEEeCceEEEEEEecCC
Q 002149 616 ENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR-HRHLVSLLGYSVAGYERLLVYEYMPQ 693 (959)
Q Consensus 616 ~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 693 (959)
.+.||+|+||.||+|... +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 378999999999999764 6899999998643 3456789999999997 99999999999999999999999999
Q ss_pred CchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC---cEEEeeccccccCCCC
Q 002149 694 GALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF---RAKVSDFGLVKLAPDS 770 (959)
Q Consensus 694 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~---~~ki~DfGla~~~~~~ 770 (959)
|+|.+++.. ...+++.++..++.||+.||+|||+ ++|+||||||+|||++.++ .+||+|||+++.....
T Consensus 91 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 91 GELFERIKK-----KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 999999854 2568999999999999999999999 8999999999999997665 8999999999865443
Q ss_pred CcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCCc
Q 002149 771 ERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDPI 850 (959)
Q Consensus 771 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (959)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ...+.........
T Consensus 163 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---------~~~~~~~~i~~~~ 232 (325)
T 3kn6_A 163 NQ-PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCT---------SAVEIMKKIKKGD 232 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CC---------CHHHHHHHHTTTC
T ss_pred CC-cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccc---------cHHHHHHHHHcCC
Confidence 22 2344578999999999999999999999999999999999999998654321100 0001111111111
Q ss_pred ccCCCCC-HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 851 LEVNDDT-FETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 851 ~~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
....... ......+.+++.+||+.||++||++.++++ +++++..
T Consensus 233 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~--h~w~~~~ 277 (325)
T 3kn6_A 233 FSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY--NEWLQDG 277 (325)
T ss_dssp CCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT--CGGGCTT
T ss_pred CCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc--ChhhccC
Confidence 1111100 112346889999999999999999999976 4555443
No 168
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5.8e-38 Score=341.09 Aligned_cols=248 Identities=24% Similarity=0.393 Sum_probs=201.5
Q ss_pred CCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe----CceEEE
Q 002149 612 NFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA----GYERLL 686 (959)
Q Consensus 612 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 686 (959)
.|...+.||+|+||.||+|.. .++..||+|++..........+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 477788999999999999976 467899999998776677778889999999999999999999998875 456899
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCEEEC-CCCcEEEeeccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQS--FIHRDLKSSNILLG-DDFRAKVSDFGL 763 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dik~~NiLl~-~~~~~ki~DfGl 763 (959)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+ |+||||||+||+++ .++.+||+|||+
T Consensus 107 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 99999999999998542 468999999999999999999999 67 99999999999997 789999999999
Q ss_pred cccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHH
Q 002149 764 VKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKL 843 (959)
Q Consensus 764 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (959)
++...... .....||+.|+|||++. +.++.++|||||||++|||++|+.||.......... ..+.
T Consensus 179 ~~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~--------- 243 (290)
T 1t4h_A 179 ATLKRASF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY--RRVT--------- 243 (290)
T ss_dssp GGGCCTTS---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH--HHHT---------
T ss_pred cccccccc---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHH--HHHh---------
Confidence 97554432 23457999999999876 468999999999999999999999998754433211 0000
Q ss_pred HHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 844 RAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
....+. .........+.+++.+||+.||++||++.++++
T Consensus 244 -~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 244 -SGVKPA----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -TTCCCG----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -ccCCcc----ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 000000 000111236889999999999999999999987
No 169
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.9e-38 Score=370.13 Aligned_cols=259 Identities=26% Similarity=0.391 Sum_probs=209.1
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEccccccc-HHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVIS-KKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|+..+.||+|+||.||+|... +|+.||||++.+.... ......+.+|+++++.++||||+++++++.+....++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 457899999999999999999764 7899999998754221 22356688999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++|+|.+++... ....+++..+..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+++..
T Consensus 263 mEy~~gg~L~~~l~~~---~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHM---GQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp ECCCCSCBHHHHHHSS---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceec
Confidence 9999999999988542 23459999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHHhhhcchHHHHHh
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEER-QYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 846 (959)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+...+..
T Consensus 337 ~~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~----------- 403 (576)
T 2acx_A 337 PEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----------- 403 (576)
T ss_dssp CTTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-----------
T ss_pred ccCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-----------
Confidence 5433 23445899999999999999999999999999999999999999987543211 111111100
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhHh
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRP-----DMGHAVNVLAPLVE 894 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~L~~~~~ 894 (959)
..... .......+.+++.+||+.||++|| ++.||++ +++++
T Consensus 404 ~~~~~-----p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~--HpfF~ 449 (576)
T 2acx_A 404 VPEEY-----SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE--HPLFK 449 (576)
T ss_dssp CCCCC-----CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT--SGGGT
T ss_pred ccccC-----CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh--Chhhc
Confidence 00001 111224678999999999999999 7888876 45544
No 170
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1e-38 Score=353.40 Aligned_cols=275 Identities=21% Similarity=0.280 Sum_probs=198.0
Q ss_pred HHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEE
Q 002149 608 NVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 686 (959)
...++|++.+.||+|+||.||+|.. .+++.||||++..........+.+.+|+++++.++||||+++++++.+....++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3456899999999999999999975 478999999997664444556678899999999999999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE-----CCCCcEEEeec
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL-----GDDFRAKVSDF 761 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl-----~~~~~~ki~Df 761 (959)
||||++ |+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+||
T Consensus 111 v~e~~~-~~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEECCS-EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEecCC-CCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 999996 6999988542 458999999999999999999999 899999999999999 45566999999
Q ss_pred cccccCCCCCcceeeccccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcch
Q 002149 762 GLVKLAPDSERSVVTRLAGTFGYLAPEYAVTG-KITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDK 840 (959)
Q Consensus 762 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 840 (959)
|+++....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+...............
T Consensus 182 g~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 260 (329)
T 3gbz_A 182 GLARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDT 260 (329)
T ss_dssp THHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTT
T ss_pred CCccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchh
Confidence 99986543222 23445789999999999874 48999999999999999999999998876544322111110000000
Q ss_pred H-----HHHHhcCCcccCCCCCHH------HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 841 E-----KLRAAIDPILEVNDDTFE------TFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 841 ~-----~~~~~~~~~~~~~~~~~~------~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
. .................. ....+.+++.+||+.||++|||+.|+++ +++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~f~ 323 (329)
T 3gbz_A 261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE--HPYFS 323 (329)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT--SGGGS
T ss_pred hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC--CcccC
Confidence 0 000000000000000111 1246789999999999999999999987 44443
No 171
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.8e-38 Score=343.42 Aligned_cols=252 Identities=24% Similarity=0.384 Sum_probs=202.3
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CC-------cEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DG-------TKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG 681 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 681 (959)
.++|...+.||+|+||.||+|... ++ ..||+|++... .....+.+.+|++++++++||||+++++++.++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 357889999999999999999654 33 47999998654 345567899999999999999999999999999
Q ss_pred ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCc------
Q 002149 682 YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFR------ 755 (959)
Q Consensus 682 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~------ 755 (959)
...++||||+++|+|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred CCCEEEEECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCccccccc
Confidence 9999999999999999999652 2458999999999999999999999 89999999999999998877
Q ss_pred --EEEeeccccccCCCCCcceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHH
Q 002149 756 --AKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGL-MALDESRPEERQYLAA 831 (959)
Q Consensus 756 --~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~-~p~~~~~~~~~~~~~~ 831 (959)
+||+|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||++|. .|+............
T Consensus 158 ~~~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~- 231 (289)
T 4fvq_A 158 PFIKLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY- 231 (289)
T ss_dssp CEEEECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-
T ss_pred ceeeeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh-
Confidence 999999998755332 23468899999999987 77899999999999999999965 455444332211100
Q ss_pred HHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 832 WFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
. . ....... ....+.+++.+||+.||++|||+.++++.|+.++..
T Consensus 232 --~----------~--~~~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 232 --E----------D--RHQLPAP-----KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp --H----------T--TCCCCCC-----SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred --h----------c--cCCCCCC-----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 0 0 0000000 012477999999999999999999999999988764
No 172
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.5e-38 Score=348.19 Aligned_cols=265 Identities=25% Similarity=0.391 Sum_probs=208.9
Q ss_pred hcCCcccCcccccCceEEEEEEE------cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCce
Q 002149 610 TKNFASENELGRGGFGVVYKGEL------DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE 683 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 683 (959)
.++|++.+.||+|+||.||+|.. .+++.||||++... .......++.+|+.+++.++||||+++++++.....
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 46799999999999999999973 35778999998754 345566789999999999999999999999999999
Q ss_pred EEEEEEecCCCchhhHHhhcccC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---CCcEEE
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSL--NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD---DFRAKV 758 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~---~~~~ki 758 (959)
.++||||+++|+|.+++...... ....+++..++.++.||+.||+|||+ .+|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999999764321 12458999999999999999999999 89999999999999984 456999
Q ss_pred eeccccccCCCCC-cceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhh
Q 002149 759 SDFGLVKLAPDSE-RSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNI 836 (959)
Q Consensus 759 ~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 836 (959)
+|||+++...... ........||+.|+|||++.+..++.++||||||+++|||++ |+.||......+.... +.
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~---~~-- 259 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF---VT-- 259 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH---HH--
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHH---Hh--
Confidence 9999997442221 122234568899999999999999999999999999999998 9999987654332111 10
Q ss_pred hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 837 KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
.... .. ........+.+++.+||+.||.+||++.++++.|+.+....
T Consensus 260 --------~~~~--~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 260 --------SGGR--MD---PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp --------TTCC--CC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred --------cCCC--CC---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 0000 00 11112346889999999999999999999999999887643
No 173
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=352.63 Aligned_cols=276 Identities=21% Similarity=0.304 Sum_probs=202.8
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
++|...+.||+|+||.||+|... +++.||||++.... .......+.+|+++++.++||||+++++++......++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccc-ccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 57899999999999999999765 78999999986542 11222245579999999999999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|++ |+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 81 YLD-KDLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp CCS-EEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred ccc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 995 6998888542 2568999999999999999999999 8999999999999999999999999999985543
Q ss_pred CCcceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc--------h
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD--------K 840 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--------~ 840 (959)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.............. .
T Consensus 153 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 153 PTK-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp -----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred Ccc-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcc
Confidence 222 2334578999999999876 56899999999999999999999999987765533222111110000 0
Q ss_pred HHHHHhcCCcccCCC---CCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 841 EKLRAAIDPILEVND---DTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 841 ~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
........+...... ........+.+++.+||+.||++|||+.|+++ ++++.....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~f~~~~~ 290 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK--HPFFLSLGE 290 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT--SGGGGGGCS
T ss_pred hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc--Chhhhhccc
Confidence 000000000000000 00011235789999999999999999999987 677766544
No 174
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2e-38 Score=351.89 Aligned_cols=261 Identities=23% Similarity=0.349 Sum_probs=205.9
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 686 (959)
+.++|+..+.||+|+||.||+|..+ +|+.||||++..... ...+|++++.++ +||||+++++++.++...++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 4567999999999999999999765 688999999876422 235688888888 79999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC----CcEEEeecc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDD----FRAKVSDFG 762 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~----~~~ki~DfG 762 (959)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||+..+ +.+||+|||
T Consensus 94 v~E~~~gg~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 94 VTELMKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EECCCCSCBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 9999999999998854 2568999999999999999999999 899999999999998543 359999999
Q ss_pred ccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..........+...+..
T Consensus 166 ~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~------- 237 (342)
T 2qr7_A 166 FAKQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS------- 237 (342)
T ss_dssp TCEECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHH-------
T ss_pred CcccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHcc-------
Confidence 9986544322 23446789999999999888899999999999999999999999986433222111111110
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
..+.. . ..........+.+++.+||..||++||++.++++ ++++..|..
T Consensus 238 --~~~~~--~-~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~--hp~~~~~~~ 286 (342)
T 2qr7_A 238 --GKFSL--S-GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR--HPWIVHWDQ 286 (342)
T ss_dssp --CCCCC--C-STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT--SHHHHTGGG
T ss_pred --CCccc--C-ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc--CCeecCccc
Confidence 00000 0 0011122346789999999999999999999987 677766644
No 175
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.6e-38 Score=342.03 Aligned_cols=255 Identities=25% Similarity=0.432 Sum_probs=209.8
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.+.|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT-CSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc-cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 35789999999999999999975 468999999987543 2344678899999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 100 e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 100 EYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp ECCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecC
Confidence 99999999998843 568999999999999999999999 899999999999999999999999999998654
Q ss_pred CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+..... .....
T Consensus 171 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-------------~~~~~ 236 (303)
T 3a7i_A 171 DTQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI-------------PKNNP 236 (303)
T ss_dssp TTBC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-------------HHSCC
T ss_pred cccc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHh-------------hcCCC
Confidence 4322 233457899999999999999999999999999999999999999876654321111 01011
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
+... ......+.+++.+||+.||++||++.++++ ++++..
T Consensus 237 ~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~--~~~~~~ 276 (303)
T 3a7i_A 237 PTLE-----GNYSKPLKEFVEACLNKEPSFRPTAKELLK--HKFILR 276 (303)
T ss_dssp CCCC-----SSCCHHHHHHHHHHCCSSGGGSCCHHHHTT--CHHHHH
T ss_pred CCCc-----cccCHHHHHHHHHHcCCChhhCcCHHHHhh--Chhhhc
Confidence 1111 112246889999999999999999999988 344443
No 176
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5.6e-38 Score=339.16 Aligned_cols=256 Identities=27% Similarity=0.434 Sum_probs=206.6
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccH-HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISK-KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|++.+.||+|+||.||+|... +++.||||++....... .....+.+|+++++.++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467999999999999999999765 57799999986542221 2256788999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 88 ~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9999999999998542 458999999999999999999999 89999999999999999999999999998654
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
.... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......+..... .. .
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-------------~~-~ 222 (279)
T 3fdn_A 160 PSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------------SR-V 222 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH-------------HH-T
T ss_pred Cccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHH-------------Hh-C
Confidence 3322 23457899999999999999999999999999999999999999876654321111 00 0
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
.... .. .....+.+++.+||+.||++||++.|+++ ++++....
T Consensus 223 ~~~~--~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~--h~~~~~~~ 265 (279)
T 3fdn_A 223 EFTF--PD---FVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITANS 265 (279)
T ss_dssp CCCC--CT---TSCHHHHHHHHHHCCSSGGGSCCHHHHHH--CHHHHHHC
T ss_pred CCCC--CC---cCCHHHHHHHHHHhccChhhCCCHHHHhh--CccccCCc
Confidence 0001 11 12236789999999999999999999988 56666543
No 177
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.6e-38 Score=354.47 Aligned_cols=247 Identities=27% Similarity=0.331 Sum_probs=193.6
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEccccccc-HHHHHHHHHHHHH-HHhcCCCCceeEEEEEEeCceEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVIS-KKAVDEFHSEIAV-LSKVRHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 686 (959)
.++|+..+.||+|+||.||+|+.+ +++.||||++.+.... ......+.+|..+ ++.++||||+++++++.+....++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357899999999999999999765 5889999999765432 2344556677776 567899999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 117 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred EEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 99999999999998642 468899999999999999999999 8999999999999999999999999999985
Q ss_pred CCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... .
T Consensus 189 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~----------------i 251 (373)
T 2r5t_A 189 NIEHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN----------------I 251 (373)
T ss_dssp GBCCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHH----------------H
T ss_pred cccCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH----------------H
Confidence 43222 223456899999999999999999999999999999999999999987654332110 1
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHH
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGH 884 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 884 (959)
+........ .....+.+++.+||+.||.+||++.+
T Consensus 252 ~~~~~~~~~---~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 252 LNKPLQLKP---NITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp HHSCCCCCS---SSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred HhcccCCCC---CCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 111111111 12236789999999999999999853
No 178
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.8e-40 Score=361.79 Aligned_cols=263 Identities=21% Similarity=0.359 Sum_probs=190.0
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHh--cCCCCceeEEEEEEeCc----e
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSK--VRHRHLVSLLGYSVAGY----E 683 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~ 683 (959)
.++|.+.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++.... .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 467999999999999999999875 899999998643 33557778888887 78999999999998776 7
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCCEEECCCCc
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLH--------SLAHQSFIHRDLKSSNILLGDDFR 755 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dik~~NiLl~~~~~ 755 (959)
.++||||+++|+|.+++.. ..+++..++.++.|++.||+||| + ++|+||||||+|||++.++.
T Consensus 76 ~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCC
T ss_pred eEEEEeccCCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCC
Confidence 8999999999999999954 35788889999999999999999 6 89999999999999999999
Q ss_pred EEEeeccccccCCCCCcc---eeeccccccccccccccccC------CCCccchHHHHHHHHHHHHhC----------CC
Q 002149 756 AKVSDFGLVKLAPDSERS---VVTRLAGTFGYLAPEYAVTG------KITTKVDVFSFGVVLMELLTG----------LM 816 (959)
Q Consensus 756 ~ki~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlG~ll~elltg----------~~ 816 (959)
+||+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++| ..
T Consensus 147 ~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~ 226 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp C-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCC
T ss_pred EEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeec
Confidence 999999999755433322 12334799999999999776 445789999999999999999 66
Q ss_pred CCCCCChHHH--HHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 817 ALDESRPEER--QYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 817 p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
||....+... ..... ........+..............+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus 227 p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 227 PYYDLVPSDPSVEEMRK---------VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTTTTCC-CCCCC-CHH---------HHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred cccccCCCCccHHHHHH---------HHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 6654322110 00000 000011111111111223566789999999999999999999999999988765
Q ss_pred hc
Q 002149 895 KW 896 (959)
Q Consensus 895 ~~ 896 (959)
+.
T Consensus 298 ~~ 299 (303)
T 3gxj_A 298 QE 299 (303)
T ss_dssp C-
T ss_pred hc
Confidence 43
No 179
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9e-38 Score=341.02 Aligned_cols=261 Identities=29% Similarity=0.390 Sum_probs=207.3
Q ss_pred CCcccCcccccCceEEEEEEEc-CC---cEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceE-EE
Q 002149 612 NFASENELGRGGFGVVYKGELD-DG---TKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYER-LL 686 (959)
Q Consensus 612 ~~~~~~~lG~G~fg~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~l 686 (959)
.|...+.||+|+||.||+|... ++ ..||+|++... ......+.+.+|+.+++.++||||+++++++.+.+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 4566789999999999999753 23 37999998753 3445667899999999999999999999999876655 89
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||||+.+|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 101 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRS----PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EECCCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEecccCCCHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 9999999999999854 23568999999999999999999999 8999999999999999999999999999985
Q ss_pred CCCCCc---ceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHHhhhcchHH
Q 002149 767 APDSER---SVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMA-LDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 767 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
...... .......+|+.|+|||.+.+..++.++||||||+++|||++|..| |......+.....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~------------ 241 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL------------ 241 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHH------------
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHh------------
Confidence 543221 122345678999999999999999999999999999999996555 4444332211110
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
..... .. ........+.+++.+|++.||.+|||+.++++.|+++++....
T Consensus 242 -~~~~~--~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 242 -AQGRR--LP---QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp -HTTCC--CC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred -hcCCC--CC---CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 00000 00 1111234688999999999999999999999999999887654
No 180
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.1e-37 Score=353.89 Aligned_cols=257 Identities=22% Similarity=0.272 Sum_probs=192.8
Q ss_pred hcCCccc-CcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHh-cCCCCceeEEEEEEe----Cc
Q 002149 610 TKNFASE-NELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSK-VRHRHLVSLLGYSVA----GY 682 (959)
Q Consensus 610 ~~~~~~~-~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~ 682 (959)
.++|... +.||+|+||.||+|... +|+.||||++... ..+.+|++++.+ .+||||+++++++.. ..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 3456665 68999999999999764 6899999998642 346688888755 489999999999876 56
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---CCcEEEe
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD---DFRAKVS 759 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~---~~~~ki~ 759 (959)
..++||||+++|+|.+++... ....+++.++..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEEEeCCCCcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEE
Confidence 789999999999999999642 23569999999999999999999999 89999999999999997 7899999
Q ss_pred eccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHHhhhc
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQ-YLAAWFWNIKS 838 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~-~~~~~~~~~~~ 838 (959)
|||+++...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+.
T Consensus 207 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~---- 280 (400)
T 1nxk_A 207 DFGFAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---- 280 (400)
T ss_dssp CCTTCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----
T ss_pred ecccccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----
Confidence 999998654322 234567899999999999999999999999999999999999999765432210 0000000
Q ss_pred chHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 839 DKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
..... .. ..........+.+++.+||+.||++|||+.++++ ++++..
T Consensus 281 -----~~~~~--~~-~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~--hp~~~~ 327 (400)
T 1nxk_A 281 -----MGQYE--FP-NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN--HPWIMQ 327 (400)
T ss_dssp -----HTCCC--CC-TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH--SHHHHT
T ss_pred -----cCccc--CC-CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc--CccccC
Confidence 00000 00 0000112346789999999999999999999988 455544
No 181
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.4e-37 Score=336.79 Aligned_cols=253 Identities=23% Similarity=0.340 Sum_probs=203.1
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccH----HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISK----KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYER 684 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 684 (959)
.++|+..+.||+|+||.||+|... +++.||+|++....... ...+.+.+|+.++++++||||+++++++.+....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357899999999999999999775 68999999987653322 1357789999999999999999999999999999
Q ss_pred EEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC----cEEEee
Q 002149 685 LLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF----RAKVSD 760 (959)
Q Consensus 685 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~----~~ki~D 760 (959)
++||||+++++|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++ .+||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~d 155 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLID 155 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred EEEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEe
Confidence 9999999999999998542 468999999999999999999999 8999999999999998877 899999
Q ss_pred ccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcch
Q 002149 761 FGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDK 840 (959)
Q Consensus 761 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 840 (959)
||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+..... ......
T Consensus 156 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~- 229 (283)
T 3bhy_A 156 FGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI---SAVNYD- 229 (283)
T ss_dssp CTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HTTCCC-
T ss_pred cccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHh---HhcccC-
Confidence 99998654432 223457899999999999999999999999999999999999999876643321110 000000
Q ss_pred HHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 841 EKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
...... ......+.+++.+|+..||++||++.++++
T Consensus 230 -~~~~~~----------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 230 -FDEEYF----------SNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp -CCHHHH----------TTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -Ccchhc----------ccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 000000 011236789999999999999999999987
No 182
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.6e-38 Score=366.95 Aligned_cols=256 Identities=26% Similarity=0.313 Sum_probs=198.9
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|+..+.||+|+||.||+|.. .+|+.||||++..... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999975 4789999999875422 334456778999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+. ++||||||||+|||++.++.+||+|||+|+..
T Consensus 227 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999988542 4689999999999999999999962 68999999999999999999999999999854
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+..... .
T Consensus 300 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i---~------------- 362 (446)
T 4ejn_A 300 IKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI---L------------- 362 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---H-------------
T ss_pred cCCC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH---H-------------
Confidence 3322 2234568999999999999999999999999999999999999999876553321111 0
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhHh
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRP-----DMGHAVNVLAPLVE 894 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~L~~~~~ 894 (959)
......+ ......+.+++.+||+.||++|| ++.|+++ ++++.
T Consensus 363 ~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~--hp~f~ 409 (446)
T 4ejn_A 363 MEEIRFP---RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ--HRFFA 409 (446)
T ss_dssp HCCCCCC---TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT--SGGGT
T ss_pred hCCCCCC---ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh--Ccccc
Confidence 0001101 11224678999999999999999 9999977 44443
No 183
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=7.6e-38 Score=365.50 Aligned_cols=262 Identities=25% Similarity=0.311 Sum_probs=210.5
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
+.++|++.+.||+|+||.||+|... +++.||||++............+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4567999999999999999999765 789999999875433334467789999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC---CCCcEEEeecccc
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLG---DDFRAKVSDFGLV 764 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~---~~~~~ki~DfGla 764 (959)
|||+++|+|.+.+... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++ .++.+||+|||++
T Consensus 100 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 9999999999888542 468999999999999999999999 8999999999999995 4567999999999
Q ss_pred ccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHH
Q 002149 765 KLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLR 844 (959)
Q Consensus 765 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (959)
+...... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||.+....+..... ..
T Consensus 172 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i---~~--------- 236 (486)
T 3mwu_A 172 TCFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV---ET--------- 236 (486)
T ss_dssp TTBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HH---------
T ss_pred eECCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hh---------
Confidence 8664432 2344679999999999875 5899999999999999999999999887654321111 00
Q ss_pred HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 845 AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
........ ........+.+++.+||+.||++|||+.++++ +++++.+..
T Consensus 237 ~~~~~~~~---~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~--hp~~~~~~~ 285 (486)
T 3mwu_A 237 GKYAFDLP---QWRTISDDAKDLIRKMLTFHPSLRITATQCLE--HPWIQKYSS 285 (486)
T ss_dssp TCCCSCSG---GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH--CHHHHHTCC
T ss_pred CCCCCCCc---ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc--CHhhccCcc
Confidence 00000000 00112236789999999999999999999988 677776654
No 184
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=340.26 Aligned_cols=251 Identities=25% Similarity=0.420 Sum_probs=184.2
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccH-HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISK-KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|++.+.||+|+||.||+|.. .+|+.||||++....... ...+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35799999999999999999976 578999999986532111 2246788999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++++|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN----RVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EECCTTEEHHHHHHT----CSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 999999999999854 22578999999999999999999999 89999999999999999999999999999865
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+. +....
T Consensus 163 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------------~~~~~ 225 (278)
T 3cok_A 163 KMPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----------------LNKVV 225 (278)
T ss_dssp C-----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------CC
T ss_pred cCCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------------HHHHh
Confidence 43222 12345789999999999998999999999999999999999999986543221 01111
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
......+ ......+.+++.+||+.||++||++.++++
T Consensus 226 ~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 226 LADYEMP---SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp SSCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccCCc---cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1111111 112246789999999999999999999976
No 185
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.2e-38 Score=344.44 Aligned_cols=272 Identities=21% Similarity=0.282 Sum_probs=198.1
Q ss_pred hcCCccc-CcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEE
Q 002149 610 TKNFASE-NELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 610 ~~~~~~~-~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 686 (959)
.++|++. +.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++.++ +||||+++++++.+....++
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ--PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC--SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC--cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 4567774 7899999999999975 47899999998754 233456788999999995 79999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCc---EEEeeccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFR---AKVSDFGL 763 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~---~ki~DfGl 763 (959)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++. +||+|||+
T Consensus 89 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 160 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDL 160 (316)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred EEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence 99999999999998652 468999999999999999999999 89999999999999988766 99999999
Q ss_pred cccCCCCCc------ceeecccccccccccccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 002149 764 VKLAPDSER------SVVTRLAGTFGYLAPEYAVT-----GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAW 832 (959)
Q Consensus 764 a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~ 832 (959)
++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~ 240 (316)
T 2ac3_A 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE 240 (316)
T ss_dssp CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----
T ss_pred ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccc
Confidence 875432211 11223569999999999875 5688999999999999999999999986543210000000
Q ss_pred HHhhhcchHHHHHhcCCcccCCCCC-HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 833 FWNIKSDKEKLRAAIDPILEVNDDT-FETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
.... .................... ......+.+++.+||+.||++||++.|+++ +++++
T Consensus 241 ~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~--hp~~~ 300 (316)
T 2ac3_A 241 ACPA-CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ--HPWVQ 300 (316)
T ss_dssp CCHH-HHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH--STTCC
T ss_pred cchh-HHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc--Chhhc
Confidence 0000 00000000000000000000 011236789999999999999999999987 44443
No 186
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=8.7e-38 Score=337.06 Aligned_cols=254 Identities=23% Similarity=0.353 Sum_probs=205.0
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
..++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++.++...++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG-CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc-chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 3467999999999999999999765 78999999987543 234457789999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 84 LEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 999999999998742 2568999999999999999999999 89999999999999999999999999999855
Q ss_pred CCCC-cceeeccccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHH
Q 002149 768 PDSE-RSVVTRLAGTFGYLAPEYAVTGKI-TTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRA 845 (959)
Q Consensus 768 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (959)
.... ........||+.|+|||.+.+..+ +.++||||||+++|||++|+.||......... ...+.... .
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~--------~ 226 (276)
T 2yex_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWKEKK--------T 226 (276)
T ss_dssp EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH-HHHHHTTC--------T
T ss_pred CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH-HHHhhhcc--------c
Confidence 3322 122344678999999999988765 77899999999999999999999876543211 11111000 0
Q ss_pred hcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 846 AIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
.... .......+.+++.+||+.||++|||+.++++
T Consensus 227 ~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 227 YLNP-------WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TSTT-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCc-------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 0000 0112236789999999999999999999976
No 187
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.1e-37 Score=338.49 Aligned_cols=249 Identities=22% Similarity=0.297 Sum_probs=202.4
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 686 (959)
..++|+..+.||+|+||.||+|... +++.||||++............+.+|+..+..+ +||||+++++++.+....++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4567999999999999999999765 789999999987655556677889999999999 89999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC--------------
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD-------------- 752 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~-------------- 752 (959)
||||+++|+|.+++..... ....+++.++..++.||+.||+|||+ ++|+||||||+||+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEECCTTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC---------------
T ss_pred EEEecCCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 9999999999999965332 12568999999999999999999999 89999999999999984
Q ss_pred -----CCcEEEeeccccccCCCCCcceeeccccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCChHHH
Q 002149 753 -----DFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTG-KITTKVDVFSFGVVLMELLTGLMALDESRPEER 826 (959)
Q Consensus 753 -----~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~ 826 (959)
...+||+|||+++...... ...||+.|+|||++.+. .++.++|||||||++|||++|..++.......
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~- 238 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH- 238 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH-
T ss_pred cccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH-
Confidence 4479999999998665432 23589999999999776 56689999999999999999987765432110
Q ss_pred HHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 827 QYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
.+.....+... ......+.+++.+||+.||++||++.++++
T Consensus 239 ---------------~~~~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 239 ---------------EIRQGRLPRIP-----QVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ---------------HHHTTCCCCCS-----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---------------HHHcCCCCCCC-----cccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 00000001111 112246789999999999999999999977
No 188
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.1e-37 Score=337.35 Aligned_cols=258 Identities=23% Similarity=0.325 Sum_probs=211.7
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|...+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467899999999999999999765 578999999876532 345567789999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++++|.+++... ..+++.++..++.|+++||+|||+ ++|+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 94 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 9999999999987542 468999999999999999999999 89999999999999999999999999999865
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+.... . .
T Consensus 166 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~------~----------~ 228 (294)
T 2rku_A 166 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR------I----------K 228 (294)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH------H----------H
T ss_pred ccCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------H----------h
Confidence 43222 23345789999999999998999999999999999999999999987664332110 0 0
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
....... ......+.+++.+|++.||++||++.++++ ++++....
T Consensus 229 ~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~--~~~~~~~~ 273 (294)
T 2rku_A 229 KNEYSIP---KHINPVAASLIQKMLQTDPTARPTINELLN--DEFFTSGY 273 (294)
T ss_dssp TTCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG--SHHHHTSC
T ss_pred hccCCCc---cccCHHHHHHHHHHcccChhhCcCHHHHhh--ChheecCC
Confidence 0011101 112236789999999999999999999987 55665443
No 189
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.7e-38 Score=353.03 Aligned_cols=272 Identities=22% Similarity=0.317 Sum_probs=210.8
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|+..+.||+|+||.||+|... +++.||+|++... ......+.+.+|+.+++.++||||+++++++..+...++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 357999999999999999999765 7899999998765 34556678999999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQ-SFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 111 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182 (360)
T ss_dssp CCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred ECCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence 999999999998652 458999999999999999999998 5 8999999999999999999999999998744
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhh-----------
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNI----------- 836 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~----------- 836 (959)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+...........
T Consensus 183 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3eqc_A 183 IDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT 259 (360)
T ss_dssp HHH---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------
T ss_pred ccc---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCccc
Confidence 221 223457899999999999999999999999999999999999999877654432211000000
Q ss_pred ---------------hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 837 ---------------KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 837 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
................ ..........+.+++.+||+.||++|||+.++++ +++++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~~~~~ 331 (360)
T 3eqc_A 260 PGRPLNKFGMDSRPPMAIFELLDYIVNEPPP-KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV--HAFIKRS 331 (360)
T ss_dssp --------------CCCHHHHHHHHHHSCCC-CCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT--SHHHHHH
T ss_pred CCCcccccccCCCCcccchhhhhHHhccCCC-CCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh--ChHhhcc
Confidence 0000000000000000 0001112336889999999999999999999987 5666553
No 190
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.1e-37 Score=346.94 Aligned_cols=281 Identities=23% Similarity=0.331 Sum_probs=212.0
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC-----c
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG-----Y 682 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 682 (959)
+.++|+..+.||+|+||.||+|... +|+.||||++... ........+.+|+++++.++||||+++++++... .
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 3568999999999999999999765 6899999998653 2445567788999999999999999999988754 6
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..++||||+. |+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecc
Confidence 7899999995 799888854 468999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcc---------eeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 002149 763 LVKLAPDSERS---------VVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAW 832 (959)
Q Consensus 763 la~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~ 832 (959)
+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.......
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 237 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred cccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence 99865432211 1223578999999998765 6789999999999999999999999988765443222111
Q ss_pred HHhhhc--------chHHHHHhcCCcccCCCCCH-----HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCC
Q 002149 833 FWNIKS--------DKEKLRAAIDPILEVNDDTF-----ETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPL 899 (959)
Q Consensus 833 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~ 899 (959)
...... ......+.+........... .....+.+++.+||+.||++|||+.++++ +++++.+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~~~~~~~~ 315 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE--HPYLQTYHDP 315 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGTTTCCT
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc--CccccccCCc
Confidence 100000 00111111111110011111 12346789999999999999999999988 7888776654
Q ss_pred CCC
Q 002149 900 DDE 902 (959)
Q Consensus 900 ~~~ 902 (959)
.++
T Consensus 316 ~~~ 318 (353)
T 2b9h_A 316 NDE 318 (353)
T ss_dssp TSS
T ss_pred ccc
Confidence 443
No 191
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=350.26 Aligned_cols=245 Identities=22% Similarity=0.325 Sum_probs=202.7
Q ss_pred HHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccH------HHHHHHHHHHHHHHhcCCCCceeEEEEEEe
Q 002149 608 NVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISK------KAVDEFHSEIAVLSKVRHRHLVSLLGYSVA 680 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 680 (959)
...++|+..+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|+++++.++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 3457899999999999999999975 578999999987653221 133457789999999999999999999999
Q ss_pred CceEEEEEEecCCC-chhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEe
Q 002149 681 GYERLLVYEYMPQG-ALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVS 759 (959)
Q Consensus 681 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~ 759 (959)
....++||||+.+| +|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~ 172 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLI 172 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEEC
T ss_pred CCEEEEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEe
Confidence 99999999999777 99988853 2468999999999999999999999 899999999999999999999999
Q ss_pred eccccccCCCCCcceeeccccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhc
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKI-TTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKS 838 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 838 (959)
|||+++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....
T Consensus 173 Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------- 235 (335)
T 3dls_A 173 DFGSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------- 235 (335)
T ss_dssp CCTTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------------
T ss_pred ecccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---------------
Confidence 9999986654332 234579999999999988877 7899999999999999999999975221
Q ss_pred chHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 839 DKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
.......... .....+.+++.+||+.||++||++.++++
T Consensus 236 -------~~~~~~~~~~---~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 236 -------TVEAAIHPPY---LVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp -------GTTTCCCCSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -------HHhhccCCCc---ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011111011 12236789999999999999999999987
No 192
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=350.49 Aligned_cols=273 Identities=26% Similarity=0.385 Sum_probs=210.7
Q ss_pred hcCCcccCcccccCceEEEEEEE-----cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc--
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-----DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY-- 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 682 (959)
.++|+..+.||+|+||.||+|.+ .+++.||||++... .....+.+.+|+++++.++||||+++++++....
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 35688999999999999999984 36889999998764 4456678999999999999999999999886543
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCT
T ss_pred ceEEEEECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCc
Confidence 679999999999999999652 2468999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcce--eeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc-
Q 002149 763 LVKLAPDSERSV--VTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD- 839 (959)
Q Consensus 763 la~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~- 839 (959)
+++......... .....++..|+|||.+.+..++.++||||||+++|||++|..|+......-. .........
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~----~~~~~~~~~~ 266 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM----RMIGNDKQGQ 266 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH----HHHCTTCCTH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH----Hhhccccchh
Confidence 998765433221 2234577889999999988899999999999999999999998764321110 000000000
Q ss_pred --hHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 840 --KEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 840 --~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
...+.+.+..... ..........+.+++.+||+.||++||++.++++.|+.+.++.
T Consensus 267 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 267 MIVFHLIELLKNNGR-LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp HHHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhhcCCC-CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 0011111111110 0111123357889999999999999999999999999987653
No 193
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=6.1e-38 Score=365.26 Aligned_cols=261 Identities=25% Similarity=0.361 Sum_probs=208.0
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccH-HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISK-KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
++|...+.||+|+||.||+|+.. +|+.||+|++.+..... ...+.+.+|+++++.++||||+++++++.+....++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 57888999999999999999875 68999999987543221 23567889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++..... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 265 E~~~gg~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp CCCTTCBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeccCCCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999865321 23579999999999999999999999 899999999999999999999999999998665
Q ss_pred CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHhhhcchHHHHHhc
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEE-RQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...+.. ...
T Consensus 341 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~-------------~i~ 406 (543)
T 3c4z_A 341 AGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ-------------RVL 406 (543)
T ss_dssp TTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHH-------------HHH
T ss_pred CCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHH-------------HHh
Confidence 4332 2334589999999999999999999999999999999999999998653211 111111 011
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCH-----HHHHHHHHHhHh
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDM-----GHAVNVLAPLVE 894 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~ev~~~L~~~~~ 894 (959)
......+ ......+.+++.+||+.||++||++ .++.+ +++++
T Consensus 407 ~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~--Hpff~ 453 (543)
T 3c4z_A 407 EQAVTYP---DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT--HPLFR 453 (543)
T ss_dssp HCCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT--SGGGT
T ss_pred hcccCCC---cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc--Ccccc
Confidence 1111111 1123467899999999999999975 56654 34443
No 194
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3e-38 Score=341.10 Aligned_cols=254 Identities=30% Similarity=0.424 Sum_probs=201.2
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC-ceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG-YERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ 688 (959)
.++|+..+.||+|+||.||+|... |+.||||++... ...+.+.+|+++++.++||||+++++++... ...++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 367899999999999999999875 889999998754 2456789999999999999999999987654 4689999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++.... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 95 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp CCCTTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred ecCCCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 9999999999986532 1348899999999999999999999 899999999999999999999999999998554
Q ss_pred CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.... +....
T Consensus 169 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~-------------~~~~~ 231 (278)
T 1byg_A 169 STQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-------------VEKGY 231 (278)
T ss_dssp -----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH-------------HTTTC
T ss_pred ccc----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-------------HhcCC
Confidence 322 22357889999999999999999999999999999998 9999987654332110 00000
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
.. .........+.+++.+||+.||++||++.++++.|+.+....
T Consensus 232 ~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 232 KM-----DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CC-----CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 00 111122346889999999999999999999999999887643
No 195
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.6e-38 Score=342.70 Aligned_cols=261 Identities=25% Similarity=0.313 Sum_probs=193.2
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|+..+.||+|+||.||+|.. .+|+.||||++..........+.+.++...++.++||||+++++++.+....++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46799999999999999999976 57899999999765444444455555666688889999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQ-SFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
||++ |+|.+++..... ....+++..+..++.|++.||+|||+ + +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp ECCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred ehhc-cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9995 688887755322 23679999999999999999999999 6 9999999999999999999999999999865
Q ss_pred CCCCcceeecccccccccccccc----ccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHH
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYA----VTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKL 843 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (959)
..... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||......... +....
T Consensus 161 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~---------- 227 (290)
T 3fme_A 161 VDDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ-LKQVV---------- 227 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH-HHHHH----------
T ss_pred ccccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHH-HHHHh----------
Confidence 44322 2334789999999996 5667899999999999999999999999864332211 11100
Q ss_pred HHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 844 RAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
....+... .......+.+++.+|++.||++|||+.|+++ ++++..
T Consensus 228 -~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~--hp~f~~ 272 (290)
T 3fme_A 228 -EEPSPQLP----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ--HPFFTL 272 (290)
T ss_dssp -HSCCCCCC----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT--SHHHHH
T ss_pred -ccCCCCcc----cccCCHHHHHHHHHHhhcChhhCcCHHHHHh--Cccccc
Confidence 00011111 1112346789999999999999999999987 555543
No 196
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.9e-37 Score=347.88 Aligned_cols=259 Identities=26% Similarity=0.364 Sum_probs=208.1
Q ss_pred HHHHHHHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc--c----HHHHHHHHHHHHHHHhc-CCCCceeE
Q 002149 603 VQVLRNVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI--S----KKAVDEFHSEIAVLSKV-RHRHLVSL 674 (959)
Q Consensus 603 ~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~----~~~~~~~~~E~~~l~~l-~h~niv~l 674 (959)
......+.++|.+.+.||+|+||.||+|... +|+.||||++..... . ....+.+.+|+.+++.+ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3445566788999999999999999999875 799999999865421 1 12245678999999999 79999999
Q ss_pred EEEEEeCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC
Q 002149 675 LGYSVAGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF 754 (959)
Q Consensus 675 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~ 754 (959)
++++......++||||+++++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~ 237 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNM 237 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTC
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCC
Confidence 99999999999999999999999998542 468999999999999999999999 8999999999999999999
Q ss_pred cEEEeeccccccCCCCCcceeecccccccccccccccc------CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 002149 755 RAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVT------GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQY 828 (959)
Q Consensus 755 ~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~ 828 (959)
.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 238 ~ikl~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 315 (365)
T 2y7j_A 238 QIRLSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLR 315 (365)
T ss_dssp CEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred CEEEEecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 99999999998665432 2344689999999999863 358889999999999999999999998765433211
Q ss_pred HHHHHHhhhcchHHHHHhcCCccc-CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 829 LAAWFWNIKSDKEKLRAAIDPILE-VNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
. +.... ...... .. .....+.+++.+||+.||++||++.++++
T Consensus 316 ~---i~~~~---------~~~~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 316 M---IMEGQ---------YQFSSPEWD----DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp H---HHHTC---------CCCCHHHHS----SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred H---HHhCC---------CCCCCcccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 10000 000000 00 01235789999999999999999999987
No 197
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.8e-38 Score=345.82 Aligned_cols=262 Identities=26% Similarity=0.350 Sum_probs=204.2
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe----CceE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA----GYER 684 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 684 (959)
.++|+..+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+++++.++||||+++++++.. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 46799999999999999999976 57899999998653 45667789999999999999999999999873 3477
Q ss_pred EEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccc
Q 002149 685 LLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLV 764 (959)
Q Consensus 685 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla 764 (959)
++||||+++|+|.+++..... ....+++.+++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEEeCCCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 899999999999999876432 23679999999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCCCcc--------eeeccccccccccccccccCC---CCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 002149 765 KLAPDSERS--------VVTRLAGTFGYLAPEYAVTGK---ITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWF 833 (959)
Q Consensus 765 ~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~ 833 (959)
+........ ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......... ..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~--- 257 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-VA--- 257 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC-HH---
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch-hh---
Confidence 754321110 012345799999999987554 688999999999999999999998532111000 00
Q ss_pred HhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhH
Q 002149 834 WNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLV 893 (959)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 893 (959)
..... ... ..........+.+++.+||+.||.+||++.++++.|+.+.
T Consensus 258 -------~~~~~----~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 258 -------LAVQN----QLS-IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp -------HHHHC----C---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred -------HHhhc----cCC-CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 00000 000 0011122346889999999999999999999999998764
No 198
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.6e-37 Score=339.31 Aligned_cols=273 Identities=23% Similarity=0.370 Sum_probs=205.6
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
++|+..+.||+|+||.||+|... +|+.||||++..........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57899999999999999999765 78999999987653333344678899999999999999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+. |+|.+++... ....+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++....
T Consensus 83 ~~~-~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 83 FLH-QDLKKFMDAS---ALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp CCS-EEHHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred ccc-CCHHHHHHhh---hccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 996 7999988642 22568999999999999999999999 8999999999999999999999999999986543
Q ss_pred CCcceeeccccccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHH---
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVTGK-ITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRA--- 845 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 845 (959)
... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||......+... ..+............
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 232 (299)
T 2r3i_A 156 PVR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF--RIFRTLGTPDEVVWPGVT 232 (299)
T ss_dssp CSB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCCCTTTSTTGG
T ss_pred Ccc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHH--HHHHHhCCCchhhhhHhh
Confidence 221 223357899999999998765 7899999999999999999999998876544321 111111100000000
Q ss_pred ---hcCCccc-CCCCCH-----HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 846 ---AIDPILE-VNDDTF-----ETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 846 ---~~~~~~~-~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
...+... ...... .....+.+++.+|++.||++|||+.++++ +++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~--hp~~~~ 289 (299)
T 2r3i_A 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA--HPFFQD 289 (299)
T ss_dssp GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT--SGGGTT
T ss_pred cCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc--Chhhhc
Confidence 0000000 000000 12246789999999999999999999987 555554
No 199
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.5e-37 Score=341.27 Aligned_cols=270 Identities=22% Similarity=0.309 Sum_probs=211.5
Q ss_pred hcCCcccCcccccCceEEEEEEE--cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCC------ceeEEEEEEeC
Q 002149 610 TKNFASENELGRGGFGVVYKGEL--DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRH------LVSLLGYSVAG 681 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~ 681 (959)
.++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+++++.++|++ ++++++++...
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 46899999999999999999976 36889999998743 445677889999999997654 99999999999
Q ss_pred ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---------
Q 002149 682 YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD--------- 752 (959)
Q Consensus 682 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~--------- 752 (959)
...++||||+ +++|.+++... ...++++..+..++.||+.||+|||+ ++|+||||||+|||++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKEN---GFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC-
T ss_pred CcEEEEEcCC-CCCHHHHHHhc---CCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCC
Confidence 9999999999 99999998652 22568999999999999999999999 89999999999999987
Q ss_pred ----------CCcEEEeeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 002149 753 ----------DFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESR 822 (959)
Q Consensus 753 ----------~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~ 822 (959)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred ccccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 668999999999865432 234578999999999999999999999999999999999999998876
Q ss_pred hHHHHHHHHHHHhhhcc-------------------------hHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCC
Q 002149 823 PEERQYLAAWFWNIKSD-------------------------KEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPS 877 (959)
Q Consensus 823 ~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 877 (959)
..+.............. .........+..............+.+++.+||+.||+
T Consensus 239 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 65433222211110000 00011111111111222334566789999999999999
Q ss_pred CCCCHHHHHHHHHHhHhh
Q 002149 878 QRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 878 ~RPt~~ev~~~L~~~~~~ 895 (959)
+|||+.|+++ +++++.
T Consensus 319 ~Rpt~~ell~--hp~f~~ 334 (339)
T 1z57_A 319 KRITLREALK--HPFFDL 334 (339)
T ss_dssp TSCCHHHHTT--SGGGGG
T ss_pred cccCHHHHhc--CHHHHH
Confidence 9999999987 455543
No 200
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.2e-37 Score=337.53 Aligned_cols=251 Identities=27% Similarity=0.419 Sum_probs=204.5
Q ss_pred HHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe------
Q 002149 608 NVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA------ 680 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 680 (959)
....+|+..+.||+|+||.||+|... +++.||+|++.... +.+.+|+++++.++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 34567999999999999999999875 78999999987542 246789999999999999999998864
Q ss_pred ----------CceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE
Q 002149 681 ----------GYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL 750 (959)
Q Consensus 681 ----------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl 750 (959)
....++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+ .+|+||||||+||++
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~ 155 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFL 155 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEE
Confidence 445789999999999999996532 2568999999999999999999999 899999999999999
Q ss_pred CCCCcEEEeeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 002149 751 GDDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLA 830 (959)
Q Consensus 751 ~~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~ 830 (959)
+.++.+||+|||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|..|+... ....
T Consensus 156 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~~~ 228 (284)
T 2a19_B 156 VDTKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----SKFF 228 (284)
T ss_dssp EETTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----HHHH
T ss_pred cCCCCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----HHHH
Confidence 9999999999999986654322 23457899999999999999999999999999999999998876321 0000
Q ss_pred HHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 831 AWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
. .+ ...... .. ....+.+++.+||+.||++||++.++++.|+.+.+.
T Consensus 229 ---~-------~~---~~~~~~-~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 229 ---T-------DL---RDGIIS-DI----FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp ---H-------HH---HTTCCC-TT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred ---H-------Hh---hccccc-cc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 0 00 011111 11 123577999999999999999999999999887654
No 201
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.7e-39 Score=362.52 Aligned_cols=246 Identities=15% Similarity=0.162 Sum_probs=192.7
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEccccc-ccHHHHHHHHHHHH---HHHhcCCCCceeEE-------EE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGV-ISKKAVDEFHSEIA---VLSKVRHRHLVSLL-------GY 677 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~---~l~~l~h~niv~l~-------~~ 677 (959)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|++ .++.++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999975 579999999987542 23345678899994 55555899999998 66
Q ss_pred EEeCc-----------------eEEEEEEecCCCchhhHHhhcccCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002149 678 SVAGY-----------------ERLLVYEYMPQGALSKHIFHWKSLN--LEPLSWKRRLNIALDVARGMEYLHSLAHQSF 738 (959)
Q Consensus 678 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 738 (959)
+.+.. ..++||||+ +|+|.+++....... ...+++..++.++.||+.||+|||+ ++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 66553 278999999 789999997543222 1345678899999999999999999 899
Q ss_pred EecCCCCCCEEECCCCcEEEeeccccccCCCCCcceeeccccccccccccccccC-----------CCCccchHHHHHHH
Q 002149 739 IHRDLKSSNILLGDDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTG-----------KITTKVDVFSFGVV 807 (959)
Q Consensus 739 vH~Dik~~NiLl~~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlG~l 807 (959)
+||||||+|||++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 2345577 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 808 LMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 808 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
+|||++|+.||......+. ........ . .....+.+++.+||+.||++||++.++++
T Consensus 303 l~elltg~~Pf~~~~~~~~----------------~~~~~~~~---~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG----------------SEWIFRSC---K----NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CC----------------SGGGGSSC---C----CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccc----------------hhhhhhhc---c----CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999975432110 01111110 1 11236789999999999999999999987
No 202
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-37 Score=364.63 Aligned_cols=254 Identities=24% Similarity=0.306 Sum_probs=200.9
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
+.++|+..+.||+|+||.||+|... +++.||||++............+.+|+.+++.++||||+++++++.+....++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3457999999999999999999765 788999999986644444567789999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---CCcEEEeecccc
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD---DFRAKVSDFGLV 764 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~---~~~~ki~DfGla 764 (959)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++. ++.+||+|||++
T Consensus 115 ~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 115 MECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 9999999999888542 468999999999999999999999 89999999999999976 455999999999
Q ss_pred ccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHH
Q 002149 765 KLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLR 844 (959)
Q Consensus 765 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (959)
+...... ......||+.|+|||++. ..++.++||||+||++|||++|..||.+....+..... ...
T Consensus 187 ~~~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i---~~~-------- 252 (494)
T 3lij_A 187 AVFENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV---EKG-------- 252 (494)
T ss_dssp EECBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HHT--------
T ss_pred eECCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhC--------
Confidence 8665432 234467999999999876 56999999999999999999999999887654422111 000
Q ss_pred HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 002149 845 AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNV 888 (959)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 888 (959)
...... .........+.+++.+||+.||.+|||+.+++++
T Consensus 253 -~~~~~~---~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 253 -KYTFDS---PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp -CCCCCS---GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -CCCCCc---hhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 000000 0000122367899999999999999999999873
No 203
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=353.83 Aligned_cols=278 Identities=23% Similarity=0.320 Sum_probs=189.8
Q ss_pred hcCCcc-cCcccccCceEEEEEEEc---CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe--Cce
Q 002149 610 TKNFAS-ENELGRGGFGVVYKGELD---DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA--GYE 683 (959)
Q Consensus 610 ~~~~~~-~~~lG~G~fg~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~ 683 (959)
.+.|++ .++||+|+||.||+|... +++.||||++...... ..+.+|+++++.++||||+++++++.. ...
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 345666 458999999999999865 5789999999754322 357799999999999999999999965 678
Q ss_pred EEEEEEecCCCchhhHHhhcccC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE----CCCCc
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSL----NLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL----GDDFR 755 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl----~~~~~ 755 (959)
.++||||+ .|+|.+++...... ....+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.
T Consensus 95 ~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCC-CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCc
Confidence 89999999 56888877543211 12359999999999999999999999 899999999999999 67889
Q ss_pred EEEeeccccccCCCCCc--ceeeccccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCChHH-------
Q 002149 756 AKVSDFGLVKLAPDSER--SVVTRLAGTFGYLAPEYAVTG-KITTKVDVFSFGVVLMELLTGLMALDESRPEE------- 825 (959)
Q Consensus 756 ~ki~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~------- 825 (959)
+||+|||+|+....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~ 250 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence 99999999986543221 223456899999999999874 58999999999999999999999997654321
Q ss_pred HHHHHHHHHhhhcch-------------HHHHHhcCCcccCCCCCH---------HHHHHHHHHHHhcccCCCCCCCCHH
Q 002149 826 RQYLAAWFWNIKSDK-------------EKLRAAIDPILEVNDDTF---------ETFWTIAELAGHCTSREPSQRPDMG 883 (959)
Q Consensus 826 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~---------~~~~~l~~l~~~cl~~dP~~RPt~~ 883 (959)
...+...+....... ......+..... ..... .....+.+|+.+||..||++|||+.
T Consensus 251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~ 329 (405)
T 3rgf_A 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTY-TNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE 329 (405)
T ss_dssp HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGG-TTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHH
T ss_pred HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCC-CcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 111111111110000 000000000000 00000 0023567999999999999999999
Q ss_pred HHHHHHHHhHhhcCC
Q 002149 884 HAVNVLAPLVEKWKP 898 (959)
Q Consensus 884 ev~~~L~~~~~~~~~ 898 (959)
|+++ ++++.....
T Consensus 330 e~L~--hp~f~~~~~ 342 (405)
T 3rgf_A 330 QAMQ--DPYFLEDPL 342 (405)
T ss_dssp HHHT--SGGGTSSSC
T ss_pred HHhc--ChhhccCCC
Confidence 9988 677765433
No 204
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2e-37 Score=343.99 Aligned_cols=257 Identities=23% Similarity=0.335 Sum_probs=211.2
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|...+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999765 578999999876432 345567789999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++++|.+++... ..+++.+++.++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp ECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 9999999999987542 468999999999999999999999 89999999999999999999999999999865
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+..... ...
T Consensus 192 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-------------~~~- 256 (335)
T 2owb_A 192 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------KKN- 256 (335)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH-------------HHT-
T ss_pred ccCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH-------------hcC-
Confidence 43222 234467999999999999999999999999999999999999999876543321110 000
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
..... . .....+.+++.+||+.||++||++.++++ ++++...
T Consensus 257 ~~~~~-~----~~~~~~~~li~~~l~~dp~~Rps~~ell~--~~~~~~~ 298 (335)
T 2owb_A 257 EYSIP-K----HINPVAASLIQKMLQTDPTARPTINELLN--DEFFTSG 298 (335)
T ss_dssp CCCCC-T----TSCHHHHHHHHHHTCSSGGGSCCGGGGGG--SHHHHTS
T ss_pred CCCCC-c----cCCHHHHHHHHHHccCChhHCcCHHHHhc--CccccCC
Confidence 00010 1 11236789999999999999999999987 5566543
No 205
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=9.6e-38 Score=356.82 Aligned_cols=255 Identities=24% Similarity=0.337 Sum_probs=191.8
Q ss_pred HHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEccccccc------HHHHHHHHHHHHHHHhcCCCCceeEEEEEEe
Q 002149 608 NVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVIS------KKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA 680 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 680 (959)
.+.++|...+.||+|+||.||+|.. .+++.||||++...... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 4568999999999999999999965 46899999998764321 1223357899999999999999999999754
Q ss_pred CceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC---CcEE
Q 002149 681 GYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDD---FRAK 757 (959)
Q Consensus 681 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~---~~~k 757 (959)
...++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ ++|+||||||+|||++.+ +.+|
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~k 282 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIK 282 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSS-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEE
T ss_pred -CceEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEE
Confidence 567999999999999988743 3568999999999999999999999 899999999999999754 4599
Q ss_pred EeeccccccCCCCCcceeecccccccccccccccc---CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHH
Q 002149 758 VSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVT---GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFW 834 (959)
Q Consensus 758 i~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~ 834 (959)
|+|||+|+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ +...+.
T Consensus 283 l~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~~i~ 358 (419)
T 3i6u_A 283 ITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQIT 358 (419)
T ss_dssp ECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HHHHHH
T ss_pred EeecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HHHHHh
Confidence 99999998764422 2345689999999999864 6788899999999999999999999976543211 000000
Q ss_pred hhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 835 NIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
.... ....... ......+.+++.+||+.||++||++.|+++
T Consensus 359 ~~~~--~~~~~~~----------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 359 SGKY--NFIPEVW----------AEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp TTCC--CCCHHHH----------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cCCC--CCCchhh----------cccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0000 0000000 011236789999999999999999999987
No 206
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.7e-37 Score=355.74 Aligned_cols=269 Identities=22% Similarity=0.284 Sum_probs=207.6
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhc------CCCCceeEEEEEEeC
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV------RHRHLVSLLGYSVAG 681 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~ 681 (959)
+..+|++.+.||+|+||.||+|... +++.||||++... ....+.+.+|+++++.+ +|+||+++++++...
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 3568999999999999999999654 6899999998753 44456778899988887 467999999999999
Q ss_pred ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCc--EEEe
Q 002149 682 YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFR--AKVS 759 (959)
Q Consensus 682 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~--~ki~ 759 (959)
...++||||+ +++|.+++... ....+++..+..++.||+.||+|||+ ++||||||||+|||++.++. +||+
T Consensus 172 ~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~ 244 (429)
T 3kvw_A 172 NHICMTFELL-SMNLYELIKKN---KFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVI 244 (429)
T ss_dssp TEEEEEECCC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEEC
T ss_pred CeEEEEEecc-CCCHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEe
Confidence 9999999999 57999988652 23568999999999999999999999 79999999999999999887 9999
Q ss_pred eccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD 839 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 839 (959)
|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+..... +......
T Consensus 245 DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i--~~~~~~p 318 (429)
T 3kvw_A 245 DFGSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACM--IELLGMP 318 (429)
T ss_dssp CCTTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHHHCCC
T ss_pred ecccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHHcCCC
Confidence 99999765432 23457899999999999999999999999999999999999999887655432221 1111111
Q ss_pred hHHH-------HHhcCCcc-----------------------------cCCCCCHHH------HHHHHHHHHhcccCCCC
Q 002149 840 KEKL-------RAAIDPIL-----------------------------EVNDDTFET------FWTIAELAGHCTSREPS 877 (959)
Q Consensus 840 ~~~~-------~~~~~~~~-----------------------------~~~~~~~~~------~~~l~~l~~~cl~~dP~ 877 (959)
...+ ...++..- ......+.. ...+.+|+.+||+.||+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~ 398 (429)
T 3kvw_A 319 SQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPA 398 (429)
T ss_dssp CHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTT
T ss_pred CHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChh
Confidence 1111 11111100 000001111 23578999999999999
Q ss_pred CCCCHHHHHHHHHHhHhh
Q 002149 878 QRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 878 ~RPt~~ev~~~L~~~~~~ 895 (959)
+|||+.|+++ ++++.+
T Consensus 399 ~Rpta~e~L~--Hpw~~~ 414 (429)
T 3kvw_A 399 VRMTPGQALR--HPWLRR 414 (429)
T ss_dssp TSCCHHHHHT--STTTC-
T ss_pred hCCCHHHHhC--Chhhcc
Confidence 9999999987 455443
No 207
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=9e-38 Score=347.39 Aligned_cols=260 Identities=22% Similarity=0.297 Sum_probs=191.1
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC-CCCceeEEEEEE--------
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR-HRHLVSLLGYSV-------- 679 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~-------- 679 (959)
..+|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 357899999999999999999764 7899999998654 4556678899999999996 999999999984
Q ss_pred eCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCEEECCCCcEE
Q 002149 680 AGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQS--FIHRDLKSSNILLGDDFRAK 757 (959)
Q Consensus 680 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dik~~NiLl~~~~~~k 757 (959)
.....++||||+ +|+|.+++.... ....+++.+++.++.||+.||+|||+ .+ |+||||||+|||++.++.+|
T Consensus 105 ~~~~~~lv~e~~-~g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 105 GQAEFLLLTELC-KGQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp SSEEEEEEEECC-SEEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEE
T ss_pred CCceEEEEEEec-CCCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEE
Confidence 334578999999 589999886532 23569999999999999999999999 67 99999999999999999999
Q ss_pred EeeccccccCCCCCcc-----------eeecccccccccccccc---ccCCCCccchHHHHHHHHHHHHhCCCCCCCCCh
Q 002149 758 VSDFGLVKLAPDSERS-----------VVTRLAGTFGYLAPEYA---VTGKITTKVDVFSFGVVLMELLTGLMALDESRP 823 (959)
Q Consensus 758 i~DfGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~ 823 (959)
|+|||+++........ ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 9999999865443221 11134689999999998 567789999999999999999999999975432
Q ss_pred HHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 824 EERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
... .......... . .....+.+++.+||+.||++||++.|+++.|+.+......
T Consensus 259 ~~~----------------~~~~~~~~~~-~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 259 LRI----------------VNGKYSIPPH-D----TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp -----------------------CCCCTT-C----CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred HHh----------------hcCcccCCcc-c----ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 110 0000000000 0 1112467899999999999999999999999999876543
No 208
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.5e-37 Score=360.50 Aligned_cols=262 Identities=24% Similarity=0.314 Sum_probs=207.5
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccH-----------HHHHHHHHHHHHHHhcCCCCceeEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISK-----------KAVDEFHSEIAVLSKVRHRHLVSLLG 676 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~l~~ 676 (959)
+.++|.+.++||+|+||.||+|... +++.||||++....... ...+.+.+|+.+++.++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4678999999999999999999765 67899999987643221 23567889999999999999999999
Q ss_pred EEEeCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC--
Q 002149 677 YSVAGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF-- 754 (959)
Q Consensus 677 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~-- 754 (959)
++.+....++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCC
Confidence 999999999999999999999988542 468999999999999999999999 8999999999999998775
Q ss_pred -cEEEeeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 002149 755 -RAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWF 833 (959)
Q Consensus 755 -~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~ 833 (959)
.+||+|||+++...... ......||+.|+|||++. +.++.++||||+||++|||++|..||.+....+....+
T Consensus 186 ~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i--- 259 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV--- 259 (504)
T ss_dssp SSEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---
T ss_pred ccEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---
Confidence 69999999998765432 234467999999999986 56999999999999999999999999987654422111
Q ss_pred HhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 834 WNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
.... ...... ........+.+++.+||+.||.+|||+.|+++ +++++++..
T Consensus 260 ~~~~---------~~~~~~---~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~--h~~~~~~~~ 310 (504)
T 3q5i_A 260 EKGK---------YYFDFN---DWKNISDEAKELIKLMLTYDYNKRCTAEEALN--SRWIKKYAN 310 (504)
T ss_dssp HHCC---------CCCCHH---HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SHHHHHTCC
T ss_pred HcCC---------CCCCcc---ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc--CHhhhhchh
Confidence 0000 000000 00011236789999999999999999999987 567766554
No 209
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8.7e-38 Score=339.85 Aligned_cols=260 Identities=28% Similarity=0.428 Sum_probs=198.8
Q ss_pred hcCCcccCcccccCceEEEEEEEc--CCc--EEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD--DGT--KIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYER 684 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 684 (959)
.++|++.+.||+|+||.||+|.+. +++ .||||++..... .....+.+.+|+++++.++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357899999999999999999753 333 689998875432 2345678999999999999999999999988765 7
Q ss_pred EEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccc
Q 002149 685 LLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLV 764 (959)
Q Consensus 685 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla 764 (959)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLM 168 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred eeeEecccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccccc
Confidence 89999999999999986532 468999999999999999999999 89999999999999999999999999999
Q ss_pred ccCCCCCcc--eeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchH
Q 002149 765 KLAPDSERS--VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKE 841 (959)
Q Consensus 765 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 841 (959)
+........ ......+|..|+|||++.+..++.++||||||+++|||++ |+.||......+.... + ..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~---~---~~--- 239 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK---I---DK--- 239 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH---H---HT---
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHH---H---Hc---
Confidence 876543322 1233567889999999998889999999999999999999 9999987765332110 0 00
Q ss_pred HHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 842 KLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
. .... .........+.+++.+|++.||++||++.++++.|..+..
T Consensus 240 ----~-~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 240 ----E-GERL---PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp ----S-CCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ----c-CCCC---CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 0 0000 1111223468899999999999999999999998887643
No 210
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.2e-37 Score=334.07 Aligned_cols=255 Identities=25% Similarity=0.385 Sum_probs=209.0
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccH-HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISK-KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
++|++.+.||+|+||.||+|... +++.||||++....... ...+.+.+|+++++.++||||+++++++.+....++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57999999999999999999765 67899999986532211 22467889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAP 768 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~ 768 (959)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++....
T Consensus 94 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 94 EFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 999999999998642 458999999999999999999999 899999999999999999999999999997554
Q ss_pred CCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcC
Q 002149 769 DSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAID 848 (959)
Q Consensus 769 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (959)
... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+.... ...
T Consensus 166 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----------------~~~ 226 (284)
T 2vgo_A 166 SLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR----------------IVN 226 (284)
T ss_dssp SSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----------------HHT
T ss_pred ccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHH----------------Hhc
Confidence 322 2345789999999999999999999999999999999999999987654332110 111
Q ss_pred CcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 849 PILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 849 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
...... ......+.+++.+|++.||.+||++.++++ ++++....
T Consensus 227 ~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~--h~~~~~~~ 270 (284)
T 2vgo_A 227 VDLKFP---PFLSDGSKDLISKLLRYHPPQRLPLKGVME--HPWVKANS 270 (284)
T ss_dssp TCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT--CHHHHHHC
T ss_pred cccCCC---CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh--CHHHHhhc
Confidence 111111 112246789999999999999999999987 56666543
No 211
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=340.50 Aligned_cols=277 Identities=21% Similarity=0.322 Sum_probs=202.5
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEE---------
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSV--------- 679 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--------- 679 (959)
.++|+..+.||+|+||.||+|... +++.||||++... .....+.+.+|+++++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 468999999999999999999765 5899999998754 4566778999999999999999999999873
Q ss_pred -----eCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC-CC
Q 002149 680 -----AGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLG-DD 753 (959)
Q Consensus 680 -----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~-~~ 753 (959)
+....++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+||+++ ++
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTED 157 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTT
T ss_pred cccccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCC
Confidence 3467899999996 799998843 568999999999999999999999 8999999999999997 56
Q ss_pred CcEEEeeccccccCCCCCc--ceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 002149 754 FRAKVSDFGLVKLAPDSER--SVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLA 830 (959)
Q Consensus 754 ~~~ki~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~ 830 (959)
+.+||+|||+++....... .......+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+.....
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 237 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 7999999999986543211 12234567999999998866 67899999999999999999999999887654432211
Q ss_pred HHHHhhhcc-hHHHHHhcCC-------cccCCCCC-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 831 AWFWNIKSD-KEKLRAAIDP-------ILEVNDDT-----FETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 831 ~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
....... .+...+.... ........ ......+.+++.+||+.||++||++.++++ ++++..+.
T Consensus 238 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~~~~~~ 313 (320)
T 2i6l_A 238 --LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS--HPYMSIYS 313 (320)
T ss_dssp --HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT--SHHHHTTC
T ss_pred --HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC--Cccccccc
Confidence 1111000 0000000000 00000000 012346889999999999999999999987 67777766
Q ss_pred CCCCC
Q 002149 898 PLDDE 902 (959)
Q Consensus 898 ~~~~~ 902 (959)
.+.++
T Consensus 314 ~p~~~ 318 (320)
T 2i6l_A 314 FPMDE 318 (320)
T ss_dssp C----
T ss_pred CccCC
Confidence 55444
No 212
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3e-37 Score=352.84 Aligned_cols=272 Identities=23% Similarity=0.333 Sum_probs=203.6
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC------ce
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG------YE 683 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 683 (959)
.+|+..+.||+|+||.||+|... +|+.||||++.... ....+|+++++.++||||+++++++... ..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 46888999999999999999875 68999999986532 1234799999999999999999988542 23
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC-CcEEEeecc
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDD-FRAKVSDFG 762 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~-~~~ki~DfG 762 (959)
.++||||++ +++.+.+..... ....+++..+..++.||++||+|||+ ++|+||||||+|||++.+ +.+||+|||
T Consensus 128 ~~lv~e~~~-~~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 128 LNLVLDYVP-ETVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEECCC-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEeehhccc-ccHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccch
Confidence 579999995 567666654322 23679999999999999999999999 899999999999999965 678999999
Q ss_pred ccccCCCCCcceeeccccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc-h
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAVTG-KITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD-K 840 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~ 840 (959)
+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+.. ...+...... .
T Consensus 203 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l--~~i~~~lg~p~~ 278 (420)
T 1j1b_A 203 SAKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL--VEIIKVLGTPTR 278 (420)
T ss_dssp TCEECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCSCCH
T ss_pred hhhhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhCCCCH
Confidence 9986544322 2346789999999999764 7899999999999999999999999987654432 2212111111 1
Q ss_pred HHHHHhcCCccc------CCCCCH------HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCC
Q 002149 841 EKLRAAIDPILE------VNDDTF------ETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLD 900 (959)
Q Consensus 841 ~~~~~~~~~~~~------~~~~~~------~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~ 900 (959)
+.+... .+... .....+ .....+.+|+.+||..||++||++.|+++ +++++......
T Consensus 279 ~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~--hp~f~~~~~~~ 347 (420)
T 1j1b_A 279 EQIREM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA--HSFFDELRDPN 347 (420)
T ss_dssp HHHHHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGGGGGCTT
T ss_pred HHHHhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC--CHhhccccccc
Confidence 112111 11100 001111 12346889999999999999999999987 67777665443
No 213
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.5e-38 Score=348.05 Aligned_cols=263 Identities=25% Similarity=0.334 Sum_probs=204.5
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHH-HHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAV-LSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|+..+.||+|+||.||+|.. .+|+.||||++....... ...++..|+.+ ++.++||||+++++++......++|
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH-HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH-HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 46789999999999999999976 578999999997654333 34455556655 7778999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQ-SFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
|||++ |+|.+++..... ....+++..+..++.||+.||+|||+ + +|+||||||+|||++.++.+||+|||+++.
T Consensus 129 ~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 129 MELMD-TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp ECCCS-EEHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred HHHhh-CcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 99996 599888865322 23679999999999999999999998 5 999999999999999999999999999986
Q ss_pred CCCCCcceeeccccccccccccccc----cCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAV----TGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
..... ......||+.|+|||++. ...++.++|||||||++|||++|+.||........ .+...+
T Consensus 204 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~-~~~~~~--------- 271 (340)
T 3an0_A 204 LVDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-QLKQVV--------- 271 (340)
T ss_dssp HSCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-HHHHHH---------
T ss_pred ccccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH-HHHHHh---------
Confidence 54321 123357999999999964 34789999999999999999999999986433221 111100
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
....+... .......+.+++.+||+.||++||++.++++ ++++.....
T Consensus 272 --~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~--hp~f~~~~~ 319 (340)
T 3an0_A 272 --EEPSPQLP----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ--HPFFTLHES 319 (340)
T ss_dssp --HSCCCCCC----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT--SHHHHHHTT
T ss_pred --cCCCCCCC----cccCCHHHHHHHHHHccCCcccCcCHHHHhc--CcCcccccc
Confidence 00001110 0112346889999999999999999999987 566665444
No 214
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7e-37 Score=355.18 Aligned_cols=364 Identities=21% Similarity=0.220 Sum_probs=271.0
Q ss_pred CCCCCCC-C--cceEecCC----------cEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC--CccCCCCc
Q 002149 64 DPCGPPC-W--KHVFCSNS----------RVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP--SFSGLSNL 128 (959)
Q Consensus 64 ~~C~~~~-w--~gv~C~~~----------~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L 128 (959)
+||+..| | ..|.|+.. +++.|+|+++.+++..|..+.++++|++|+|++|.+.+.++ .|.++++|
T Consensus 2 ~p~~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L 81 (455)
T 3v47_A 2 DPGTSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSL 81 (455)
T ss_dssp -----CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTC
T ss_pred CCccceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccC
Confidence 5677666 2 33888753 58999999999998889999999999999999999986543 59999999
Q ss_pred cEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCcc--ccCccccCeecccccccCCCCChh-hcCCCCCC
Q 002149 129 KYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKG--LQSSAQLTNLSCMSCNLAGQLPDF-LGNFASLQ 205 (959)
Q Consensus 129 ~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~--l~~l~~L~~L~l~~n~l~~~~p~~-l~~l~~L~ 205 (959)
++|+|++|+++.+++..|.++++|++|+|++|++++ .+|.. +..+++|++|++++|++.+..|.. +.++++|+
T Consensus 82 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~ 157 (455)
T 3v47_A 82 IILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDG----AVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFH 157 (455)
T ss_dssp CEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBT----HHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCC
T ss_pred CEEeCCCCccCccChhhccCcccCCEEeCCCCCCCc----cccCcccccCcccCCEEECCCCccCccCcccccCCCCccc
Confidence 999999999999999999999999999999999975 23443 889999999999999999988876 89999999
Q ss_pred EEEecCCcCCCCCCcccccC---CcccccccccCCCCccccc------ccccCCcCCcEEEccCccccccCchhhcCC--
Q 002149 206 NLKLSGNNLTGPIPESFKGL---NLVNLWLNDQKGGGFTGTI------DVLGNMDQLRTLWLHGNHFSGTIPESFGKL-- 274 (959)
Q Consensus 206 ~L~Ls~N~l~~~~p~~~~~l---~l~~L~~~~~~~~~l~~~~------~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-- 274 (959)
+|+|++|++++..+..+..+ ++..|.+..+....+.... ..+..+++|++|+|++|++++.+|..+..+
T Consensus 158 ~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~ 237 (455)
T 3v47_A 158 VLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIA 237 (455)
T ss_dssp EEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTT
T ss_pred EEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhcccc
Confidence 99999999999999888765 4555555555444433221 123456899999999999998888777554
Q ss_pred -CCCCEEeCCCCcCCCC----------Cccccccc---cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCch
Q 002149 275 -TSLKDLNLNSNQFVGL----------IPPSLASL---SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAP 340 (959)
Q Consensus 275 -~~L~~L~Ls~N~l~~~----------~p~~~~~~---~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (959)
++|+.|++++|.+.+. .+..+..+ +|+.|+|++|.+++.+|.....
T Consensus 238 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~-------------------- 297 (455)
T 3v47_A 238 GTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSH-------------------- 297 (455)
T ss_dssp TCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTT--------------------
T ss_pred ccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhccc--------------------
Confidence 5555555555543322 11111111 3555555555555444432110
Q ss_pred hhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCccccccccc
Q 002149 341 EVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQI 420 (959)
Q Consensus 341 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~ 420 (959)
++.+.......+.........++.+++|+.|+|++|++.+..|..|+++++|++|+|++|++++..
T Consensus 298 --------------l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 363 (455)
T 3v47_A 298 --------------FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALG 363 (455)
T ss_dssp --------------CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEEC
T ss_pred --------------CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccC
Confidence 001111111111111122233456789999999999999888999999999999999999999888
Q ss_pred CCCccCCCCCCeEeCCCCccCCCCCC----CCCcceecccCCCCCCCCC
Q 002149 421 PTNWTNLKSLTLLDLSQNNLSPPLPK----FSGAVKLSLDGNPLLNGKS 465 (959)
Q Consensus 421 p~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~~~~~l~~N~~~c~~~ 465 (959)
|..|.++++|++|+|++|++++.++. +..+..+.+.+|++.|..+
T Consensus 364 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 364 DQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999999999999999999986663 3567789999999998853
No 215
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.4e-37 Score=338.59 Aligned_cols=258 Identities=24% Similarity=0.351 Sum_probs=206.8
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
+.++|...+.||+|+||.||+|... +|+.||+|++... .....+.+.+|+++++.++||||+++++++.+....++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKS--PAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecc--cccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 4567999999999999999999765 7899999998754 223345688999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCcEEEeecccc
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL---GDDFRAKVSDFGLV 764 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl---~~~~~~ki~DfGla 764 (959)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++
T Consensus 85 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 85 MQLVSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp ECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEcCCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 9999999999988542 468999999999999999999999 899999999999999 78899999999999
Q ss_pred ccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHH
Q 002149 765 KLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLR 844 (959)
Q Consensus 765 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (959)
+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... +..
T Consensus 157 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---i~~--------- 221 (304)
T 2jam_A 157 KMEQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEK---IKE--------- 221 (304)
T ss_dssp CCCCCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH---HHH---------
T ss_pred eecCCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHH---HHc---------
Confidence 754332 12335689999999999999999999999999999999999999987654332110 000
Q ss_pred HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 845 AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
...... ..........+.+++.+|+..||++||++.++++ ++++...
T Consensus 222 ~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~--h~~~~~~ 268 (304)
T 2jam_A 222 GYYEFE---SPFWDDISESAKDFICHLLEKDPNERYTCEKALS--HPWIDGN 268 (304)
T ss_dssp CCCCCC---TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT--SHHHHSS
T ss_pred CCCCCC---ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc--CccccCC
Confidence 000000 0001122346889999999999999999999987 5566543
No 216
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4e-37 Score=331.88 Aligned_cols=255 Identities=27% Similarity=0.405 Sum_probs=199.7
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.+++.++||||+++++++......++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357999999999999999999875 789999999865421 122356788999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++++|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 9999999999998642 458999999999999999999999 89999999999999999999999999999866
Q ss_pred CCCCcceeeccccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKI-TTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
.... ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||......+.... +...
T Consensus 162 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~-------------~~~~ 226 (276)
T 2h6d_A 162 SDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK-------------IRGG 226 (276)
T ss_dssp CC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-------------HHHC
T ss_pred CCCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH-------------hhcC
Confidence 4432 2234578999999999988765 6899999999999999999999987654332110 0110
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
... . .. .....+.+++.+|++.||++||++.++++ ++++.+
T Consensus 227 ~~~-~--~~---~~~~~l~~li~~~l~~~p~~Rps~~~~l~--h~~~~~ 267 (276)
T 2h6d_A 227 VFY-I--PE---YLNRSVATLLMHMLQVDPLKRATIKDIRE--HEWFKQ 267 (276)
T ss_dssp CCC-C--CT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHH--SHHHHT
T ss_pred ccc-C--ch---hcCHHHHHHHHHHccCChhhCCCHHHHHh--Chhhcc
Confidence 000 0 11 11236789999999999999999999987 455554
No 217
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.8e-37 Score=350.20 Aligned_cols=273 Identities=22% Similarity=0.316 Sum_probs=203.1
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCc------e
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGY------E 683 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 683 (959)
..+|...+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++.... .
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 346899999999999999999987777799998865321 1237999999999999999999986543 3
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC-CCCcEEEeecc
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLG-DDFRAKVSDFG 762 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~-~~~~~ki~DfG 762 (959)
.++||||++++ +.+.+..... ....+++..+..++.||++||+|||+ ++|+||||||+|||++ .++.+||+|||
T Consensus 113 ~~lv~e~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 113 LNLVLEYVPET-VYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEECCSEE-HHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEeeccCcc-HHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 78999999654 4444432222 23679999999999999999999999 8999999999999999 79999999999
Q ss_pred ccccCCCCCcceeeccccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc-h
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAVTG-KITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD-K 840 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~ 840 (959)
+|+....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+..... +...... .
T Consensus 188 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i--~~~~g~p~~ 263 (394)
T 4e7w_A 188 SAKILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEI--IKVLGTPSR 263 (394)
T ss_dssp TCEECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHHHCCCCH
T ss_pred CcccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHHhCCCCH
Confidence 9986644332 2345789999999998765 5899999999999999999999999987654432221 1111110 1
Q ss_pred HHHHH----hcCCccc-CCCCCH------HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCC
Q 002149 841 EKLRA----AIDPILE-VNDDTF------ETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPL 899 (959)
Q Consensus 841 ~~~~~----~~~~~~~-~~~~~~------~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~ 899 (959)
+.+.. ....... ...... .....+.+++.+||..||++|||+.|+++ +++++.....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~f~~~~~~ 331 (394)
T 4e7w_A 264 EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC--HPFFDELRTG 331 (394)
T ss_dssp HHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT--SGGGSTTTSS
T ss_pred HHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc--Chhhhhhccc
Confidence 11111 0000000 001111 12246889999999999999999999987 7777765543
No 218
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=338.48 Aligned_cols=258 Identities=24% Similarity=0.383 Sum_probs=204.1
Q ss_pred HHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEE
Q 002149 608 NVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 686 (959)
...++|++.+.||+|+||.||+|... +|+.||||++.... ..+.+.+|+.+++.++||||+++++++......++
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 34578999999999999999999765 58999999987542 24568899999999999999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 102 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 174 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQ 174 (314)
T ss_dssp EEECCTTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EeecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence 99999999999998532 2568999999999999999999999 8999999999999999999999999999986
Q ss_pred CCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||............ ...
T Consensus 175 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-------------~~~ 240 (314)
T 3com_A 175 LTDTMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI-------------PTN 240 (314)
T ss_dssp CBTTBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-------------HHS
T ss_pred hhhhcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-------------hcC
Confidence 544322 233457899999999999999999999999999999999999999876543321110 000
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
..+... ........+.+++.+||+.||.+||++.++++ ++++..
T Consensus 241 ~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~--~~~~~~ 284 (314)
T 3com_A 241 PPPTFR---KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ--HPFVRS 284 (314)
T ss_dssp CCCCCS---SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT--SHHHHT
T ss_pred CCcccC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHh--CHHHhc
Confidence 011110 01112346789999999999999999999987 455543
No 219
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-37 Score=343.71 Aligned_cols=276 Identities=24% Similarity=0.276 Sum_probs=202.1
Q ss_pred HHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccH---HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCce
Q 002149 608 NVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISK---KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE 683 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 683 (959)
...++|+..+.||+|+||.||+|... +|+.||||++....... ...+.+.+|+++++.++||||+++++++.+...
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999764 68999999987542221 112467899999999999999999999999999
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccc
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGL 763 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGl 763 (959)
.++||||++ ++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (346)
T 1ua2_A 87 ISLVFDFME-TDLEVIIKD----NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGL 158 (346)
T ss_dssp CEEEEECCS-EEHHHHHTT----CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred eEEEEEcCC-CCHHHHHHh----cCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEeccc
Confidence 999999996 588888743 22568899999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcceeeccccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcch-H
Q 002149 764 VKLAPDSERSVVTRLAGTFGYLAPEYAVTG-KITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDK-E 841 (959)
Q Consensus 764 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 841 (959)
++....... ......||+.|+|||++.+. .++.++|||||||++|||++|..||.+....+... ..+....... .
T Consensus 159 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~--~i~~~~~~~~~~ 235 (346)
T 1ua2_A 159 AKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLT--RIFETLGTPTEE 235 (346)
T ss_dssp GSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCCCCTT
T ss_pred ceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHH--HHHHHcCCCChh
Confidence 986644322 23446789999999999764 58899999999999999999999998876543321 1111111000 0
Q ss_pred HHHHhcC--Cccc---CCCCC-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 842 KLRAAID--PILE---VNDDT-----FETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 842 ~~~~~~~--~~~~---~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
....... .... ..... ......+.+++.+||+.||++|||+.|+++ ++++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--h~~f~~~ 298 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK--MKYFSNR 298 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT--SGGGTSS
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc--ChhhhcC
Confidence 0000000 0000 00001 111246889999999999999999999987 5666543
No 220
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=350.32 Aligned_cols=265 Identities=21% Similarity=0.358 Sum_probs=203.0
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 689 (959)
.++|++.+.||+|+||.||+|.... .||+|++..........+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4689999999999999999998753 59999987654444445667889999999999999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCC
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~ 769 (959)
|+++++|.+++.. ....+++..+..++.||+.||+|||+ ++|+||||||+||+++ ++.+||+|||+++....
T Consensus 110 ~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 110 LCKGRTLYSVVRD----AKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp CCCSEEHHHHTTS----SCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred cccCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 9999999999853 22468999999999999999999999 8999999999999998 67999999999875432
Q ss_pred CC----cceeecccccccccccccccc---------CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhh
Q 002149 770 SE----RSVVTRLAGTFGYLAPEYAVT---------GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNI 836 (959)
Q Consensus 770 ~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~ 836 (959)
.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~------- 254 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ------- 254 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHH-------
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-------
Confidence 11 112233568999999999864 4578899999999999999999999987765432111
Q ss_pred hcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCCCC
Q 002149 837 KSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPLDD 901 (959)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~ 901 (959)
......+..... .....+.+++.+||..||++||++.++++.|+.+.++.....+
T Consensus 255 ------~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~ 309 (319)
T 2y4i_B 255 ------MGTGMKPNLSQI----GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309 (319)
T ss_dssp ------HHTTCCCCCCCS----SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---------
T ss_pred ------hccCCCCCCCcC----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCC
Confidence 011111111100 1123578999999999999999999999999998877655433
No 221
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=8.8e-38 Score=365.10 Aligned_cols=262 Identities=24% Similarity=0.311 Sum_probs=212.0
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEccccccc-HHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVIS-KKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 686 (959)
+.++|+..+.||+|+||.||+|... +|+.||||++...... ....+.+.+|++++++++||||+++++++.+....++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3467999999999999999999765 7899999998654322 3446778999999999999999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCcEEEeeccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL---GDDFRAKVSDFGL 763 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl---~~~~~~ki~DfGl 763 (959)
||||+.+|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||+
T Consensus 104 v~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 175 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGL 175 (484)
T ss_dssp EECCCCSCBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred EEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence 9999999999998853 2568999999999999999999999 899999999999999 5678999999999
Q ss_pred cccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHH
Q 002149 764 VKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKL 843 (959)
Q Consensus 764 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (959)
++...... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||.+....+....+ ...
T Consensus 176 a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i---~~~------- 242 (484)
T 3nyv_A 176 STHFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV---EKG------- 242 (484)
T ss_dssp HHHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HHC-------
T ss_pred eEEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---HcC-------
Confidence 98665433 2344579999999999865 6899999999999999999999999887654321111 000
Q ss_pred HHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 844 RAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
....... ........+.+++.+||+.||++|||+.++++ +++++.+..
T Consensus 243 --~~~~~~~---~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~--h~~~~~~~~ 290 (484)
T 3nyv_A 243 --KYTFELP---QWKKVSESAKDLIRKMLTYVPSMRISARDALD--HEWIQTYTK 290 (484)
T ss_dssp --CCCCCSG---GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT--SHHHHHHTC
T ss_pred --CCCCCCc---ccccCCHHHHHHHHHHCCCChhHCcCHHHHhh--Chhhccccc
Confidence 0000000 00112346789999999999999999999988 577766543
No 222
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6e-37 Score=335.66 Aligned_cols=263 Identities=21% Similarity=0.276 Sum_probs=204.5
Q ss_pred HhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEccccccc--HHHHHHHHHHHHHHHhcCCCCceeEEEEEE--eCce
Q 002149 609 VTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVIS--KKAVDEFHSEIAVLSKVRHRHLVSLLGYSV--AGYE 683 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 683 (959)
+.++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|+++++.++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 347899999999999999999976 46889999998754221 234577899999999999999999999984 4557
Q ss_pred EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccc
Q 002149 684 RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGL 763 (959)
Q Consensus 684 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGl 763 (959)
.++||||++++ +.+++... ....+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~ 155 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGV 155 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEehhccCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccc
Confidence 89999999766 76766442 23679999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCC-CcceeeccccccccccccccccCC--CCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcch
Q 002149 764 VKLAPDS-ERSVVTRLAGTFGYLAPEYAVTGK--ITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDK 840 (959)
Q Consensus 764 a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 840 (959)
++..... .........||+.|+|||++.+.. ++.++||||||+++|||++|+.||......+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----------- 224 (305)
T 2wtk_C 156 AEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFEN----------- 224 (305)
T ss_dssp CEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-----------
T ss_pred ccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH-----------
Confidence 9865432 222334567999999999987644 47799999999999999999999987654332110
Q ss_pred HHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCCC
Q 002149 841 EKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKPL 899 (959)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~ 899 (959)
+... ...... .....+.+++.+|++.||++||++.++++ ++++.+....
T Consensus 225 --i~~~---~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~--~~~~~~~~~~ 273 (305)
T 2wtk_C 225 --IGKG---SYAIPG---DCGPPLSDLLKGMLEYEPAKRFSIRQIRQ--HSWFRKKHPP 273 (305)
T ss_dssp --HHHC---CCCCCS---SSCHHHHHHHHHHTCSSTTTSCCHHHHHH--SHHHHSCCCC
T ss_pred --HhcC---CCCCCC---ccCHHHHHHHHHHccCChhhCCCHHHHhc--CcccccCCCC
Confidence 0000 001011 12236789999999999999999999987 5667665443
No 223
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.8e-37 Score=349.44 Aligned_cols=271 Identities=21% Similarity=0.318 Sum_probs=203.0
Q ss_pred HHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeC-----
Q 002149 608 NVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAG----- 681 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 681 (959)
...++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP------RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 4467899999999999999999975 578999999986542 1234799999999999999999998543
Q ss_pred ---------------------------------ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 002149 682 ---------------------------------YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGME 728 (959)
Q Consensus 682 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ 728 (959)
...++||||++ |+|.+.+..... ....+++..+..++.||++||+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHH
Confidence 34789999996 688888765332 2367999999999999999999
Q ss_pred HHHhcCCCCeEecCCCCCCEEEC-CCCcEEEeeccccccCCCCCcceeeccccccccccccccccC-CCCccchHHHHHH
Q 002149 729 YLHSLAHQSFIHRDLKSSNILLG-DDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTG-KITTKVDVFSFGV 806 (959)
Q Consensus 729 yLH~~~~~~ivH~Dik~~NiLl~-~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~ 806 (959)
|||+ .+|+||||||+|||++ .++.+||+|||+|+....... .....||+.|+|||++.+. .++.++||||+||
T Consensus 156 ~LH~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 156 FIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HHHT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HHHH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 9999 8999999999999997 688999999999986644332 2345789999999998775 4899999999999
Q ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc-hHHHHHhcCCcc------cCCCCCH------HHHHHHHHHHHhccc
Q 002149 807 VLMELLTGLMALDESRPEERQYLAAWFWNIKSD-KEKLRAAIDPIL------EVNDDTF------ETFWTIAELAGHCTS 873 (959)
Q Consensus 807 ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~------~~~~~l~~l~~~cl~ 873 (959)
++|||++|+.||.+....+..... +...... .+.+.. ..+.. ......+ .....+.+++.+||+
T Consensus 231 il~ell~g~~pf~~~~~~~~~~~i--~~~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 307 (383)
T 3eb0_A 231 VFGELILGKPLFSGETSIDQLVRI--IQIMGTPTKEQMIR-MNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307 (383)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHH--HHHHCCCCHHHHHH-HCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCC
T ss_pred HHHHHHhCCCCCCCCChHHHHHHH--HHHhCCCCHHHHHH-hCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHcc
Confidence 999999999999987655432221 1111110 111111 11100 0000011 123357899999999
Q ss_pred CCCCCCCCHHHHHHHHHHhHhhc
Q 002149 874 REPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 874 ~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
.||++|||+.|+++ +++++.+
T Consensus 308 ~dP~~R~t~~e~l~--hp~f~~~ 328 (383)
T 3eb0_A 308 YEPDLRINPYEAMA--HPFFDHL 328 (383)
T ss_dssp SSGGGSCCHHHHHT--SGGGHHH
T ss_pred CChhhCCCHHHHhc--CHHHHHH
Confidence 99999999999987 5665543
No 224
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1e-37 Score=341.23 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=199.1
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
..++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+++++.++||||+++++++......++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 3568999999999999999999875 5889999998754 334457789999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++++|.+++... ...+++..+..++.||+.||+|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 95 ~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EECCTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred EEeCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 9999999999988542 2568999999999999999999999 89999999999999999999999999997632
Q ss_pred CCCCcceeeccccccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAV-----TGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
.... .......||+.|+|||++. +..++.++||||||+++|||++|+.||......+... ...
T Consensus 168 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~--------- 235 (302)
T 2j7t_A 168 LKTL-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL--KIA--------- 235 (302)
T ss_dssp HHHH-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHH---------
T ss_pred cccc-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH--HHh---------
Confidence 1111 1123357899999999983 6678999999999999999999999998766533211 000
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
....+.. .........+.+++.+||+.||++||++.++++
T Consensus 236 --~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 236 --KSDPPTL---LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --HSCCCCC---SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --ccCCccc---CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000000 011112346789999999999999999999976
No 225
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5e-37 Score=344.81 Aligned_cols=283 Identities=21% Similarity=0.261 Sum_probs=200.9
Q ss_pred HHHHHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCce
Q 002149 605 VLRNVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE 683 (959)
Q Consensus 605 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 683 (959)
......++|++.+.||+|+||.||+|... +|+.||||++.... .....+.+|++.+..++||||+++++++.....
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 34566789999999999999999999764 68999999886532 222345678888899999999999999876433
Q ss_pred -------EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEecCCCCCCEEECC-C
Q 002149 684 -------RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLH--SLAHQSFIHRDLKSSNILLGD-D 753 (959)
Q Consensus 684 -------~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivH~Dik~~NiLl~~-~ 753 (959)
.++||||+++ +|.+.+.... .....+++..+..++.|++.||.||| + ++|+||||||+|||++. +
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCC
Confidence 7899999965 5554443321 23367899999999999999999999 7 89999999999999997 8
Q ss_pred CcEEEeeccccccCCCCCcceeeccccccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 002149 754 FRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGK-ITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAW 832 (959)
Q Consensus 754 ~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~ 832 (959)
+.+||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+.....
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~-- 244 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEI-- 244 (360)
T ss_dssp TEEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--
T ss_pred CcEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHH--
Confidence 9999999999986654332 23457899999999987654 899999999999999999999999987654432221
Q ss_pred HHhhhcchHHHHHhcCCccc---------------CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 833 FWNIKSDKEKLRAAIDPILE---------------VNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
+.............+.+... ...........+.+++.+||+.||.+|||+.|+++ +++++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~--hp~f~~~~ 322 (360)
T 3e3p_A 245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC--HPYFDELH 322 (360)
T ss_dssp HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT--SGGGGGGG
T ss_pred HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc--CccccccC
Confidence 11111111111111111100 00111123457889999999999999999999987 78887765
Q ss_pred CCCC
Q 002149 898 PLDD 901 (959)
Q Consensus 898 ~~~~ 901 (959)
.+..
T Consensus 323 ~~~~ 326 (360)
T 3e3p_A 323 DPAT 326 (360)
T ss_dssp CTTC
T ss_pred Cccc
Confidence 5443
No 226
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.5e-37 Score=340.99 Aligned_cols=275 Identities=22% Similarity=0.303 Sum_probs=206.9
Q ss_pred HhcCCcccCcccccCceEEEEEEE--cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhc---CCCCceeEEEEEE----
Q 002149 609 VTKNFASENELGRGGFGVVYKGEL--DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV---RHRHLVSLLGYSV---- 679 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 679 (959)
+.++|++.+.||+|+||.||+|.. .+|+.||||++............+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999987 4688999999875433332233566788777776 8999999999987
Q ss_pred -eCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEE
Q 002149 680 -AGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKV 758 (959)
Q Consensus 680 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki 758 (959)
.....++||||+. |+|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHS---CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEE
Confidence 4567899999996 7999998652 23458999999999999999999999 89999999999999999999999
Q ss_pred eeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhc
Q 002149 759 SDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKS 838 (959)
Q Consensus 759 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 838 (959)
+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+..... +.....
T Consensus 162 ~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i--~~~~~~ 237 (326)
T 1blx_A 162 ADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI--LDVIGL 237 (326)
T ss_dssp CSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHHHCC
T ss_pred ecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH--HHHcCC
Confidence 9999998654322 234467899999999999999999999999999999999999999887654322111 111000
Q ss_pred -chHHHHHh-------cCCcc--cCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhc
Q 002149 839 -DKEKLRAA-------IDPIL--EVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 839 -~~~~~~~~-------~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 896 (959)
........ +.... ............+.+++.+||+.||++||++.++++ ++++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~--hp~~~~~ 303 (326)
T 1blx_A 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS--HPYFQDL 303 (326)
T ss_dssp CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT--SGGGTTC
T ss_pred CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc--Ccccccc
Confidence 00000000 00000 000001122346789999999999999999999976 5565543
No 227
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.8e-37 Score=369.82 Aligned_cols=259 Identities=23% Similarity=0.342 Sum_probs=207.5
Q ss_pred hcCCcccCcccccCceEEEEEEEc----CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD----DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 685 (959)
.++|+..+.||+|+||.||+|.+. .+..||||++... ......+.+.+|+.+++.++||||+++++++. ....+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 467889999999999999999764 2457999998754 24455678999999999999999999999985 45689
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 467 lv~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp EEEECCTTCBHHHHHHHT----TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred EEEEcCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCe
Confidence 999999999999998642 2468999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhcchHHHH
Q 002149 766 LAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKSDKEKLR 844 (959)
Q Consensus 766 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (959)
..............+|+.|+|||++.+..++.++|||||||++|||++ |..||.+....+.... + .
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~---i----------~ 606 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---I----------E 606 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH---H----------H
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH---H----------H
Confidence 765543333344567889999999999999999999999999999997 9999987765432111 1 0
Q ss_pred HhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 845 AAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
... ... ........+.+++.+||+.||++||++.++++.|..+++.
T Consensus 607 ~~~--~~~---~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 607 NGE--RLP---MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp HTC--CCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCC--CCC---CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 000 000 1112234688999999999999999999999999998764
No 228
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=9.5e-38 Score=351.81 Aligned_cols=255 Identities=13% Similarity=0.101 Sum_probs=184.2
Q ss_pred cCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhc--CCCCceeEE-------EEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKV--RHRHLVSLL-------GYSV 679 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~~ 679 (959)
.+|...+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888999999999999999764 789999999987543 334566778886655555 599988755 4444
Q ss_pred eC-----------------ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCC
Q 002149 680 AG-----------------YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRR------LNIALDVARGMEYLHSLAHQ 736 (959)
Q Consensus 680 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~ 736 (959)
.. ...++||||++ |+|.+++.... ..+.+..+ ..++.||+.||+|||+ +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~ 213 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQS---K 213 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHHH---C
Confidence 32 34799999997 99999997632 23455555 7888999999999999 8
Q ss_pred CeEecCCCCCCEEECCCCcEEEeeccccccCCCCCcceeecccccccccccccccc--CCCCccchHHHHHHHHHHHHhC
Q 002149 737 SFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVT--GKITTKVDVFSFGVVLMELLTG 814 (959)
Q Consensus 737 ~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~ll~elltg 814 (959)
+|+||||||+|||++.++.+||+|||+|+..... .....+|+.|+|||++.+ ..++.++|||||||++|||++|
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999866432 224567799999999987 6799999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 815 LMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 815 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
+.||....+..... . . .............. .........+.+++.+||+.||++||++.++++
T Consensus 290 ~~Pf~~~~~~~~~~-------~-~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 290 FLPFGLVTPGIKGS-------W-K-RPSLRVPGTDSLAF-GSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SCSTTBCCTTCTTC-------C-C-BCCTTSCCCCSCCC-TTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCcCcccccc-------h-h-hhhhhhccccccch-hhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99998764321100 0 0 00000000000110 001122347889999999999999999999976
No 229
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.5e-37 Score=333.47 Aligned_cols=265 Identities=24% Similarity=0.305 Sum_probs=211.8
Q ss_pred HHHHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceE
Q 002149 606 LRNVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYER 684 (959)
Q Consensus 606 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 684 (959)
.....++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|++++++++||||+++++++......
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 3455678999999999999999999765 789999999876544445567889999999999999999999999999999
Q ss_pred EEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC---CcEEEeec
Q 002149 685 LLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDD---FRAKVSDF 761 (959)
Q Consensus 685 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~---~~~ki~Df 761 (959)
++||||+++++|.+++... ..+++.+++.++.||+.||+|||+ ++|+||||||+||+++.+ +.+||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Df 168 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDF 168 (287)
T ss_dssp EEEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECST
T ss_pred EEEEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEecc
Confidence 9999999999999888542 468999999999999999999999 899999999999999754 47999999
Q ss_pred cccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchH
Q 002149 762 GLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKE 841 (959)
Q Consensus 762 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 841 (959)
|+++....... .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||......+.... +..
T Consensus 169 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~---~~~------ 236 (287)
T 2wei_A 169 GLSTCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR---VET------ 236 (287)
T ss_dssp TGGGTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHH------
T ss_pred CcceeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH---HHc------
Confidence 99986544322 233468999999998865 489999999999999999999999987654332111 100
Q ss_pred HHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 842 KLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
........ ........+.+++.+|++.||++||++.++++ +++++++..
T Consensus 237 ---~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~--hp~~~~~~~ 285 (287)
T 2wei_A 237 ---GKYAFDLP---QWRTISDDAKDLIRKMLTFHPSLRITATQCLE--HPWIQKYSS 285 (287)
T ss_dssp ---CCCCCCSG---GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH--SHHHHHHCC
T ss_pred ---CCCCCCch---hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc--CHHHhcccc
Confidence 00000000 00112246789999999999999999999987 566666543
No 230
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.9e-37 Score=338.78 Aligned_cols=261 Identities=16% Similarity=0.257 Sum_probs=201.9
Q ss_pred cCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC-CCCceeEEEEEEe--CceEEE
Q 002149 611 KNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR-HRHLVSLLGYSVA--GYERLL 686 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~l 686 (959)
++|++.+.||+|+||.||+|.. .+++.||||++... ..+.+.+|+++++.++ ||||+++++++.+ ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 5799999999999999999965 57899999998643 2356889999999997 9999999999987 667899
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC-cEEEeeccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF-RAKVSDFGLVK 765 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~-~~ki~DfGla~ 765 (959)
||||+++++|.+++ ..+++.++..++.||+.||+|||+ ++|+||||||+|||++.++ .+||+|||+++
T Consensus 111 v~e~~~~~~l~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 111 VFEHVNNTDFKQLY--------QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEECCCCCCHHHHG--------GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeccCchhHHHHH--------HhCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 99999999999887 348899999999999999999999 8999999999999999776 89999999998
Q ss_pred cCCCCCcceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHH
Q 002149 766 LAPDSERSVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLR 844 (959)
Q Consensus 766 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (959)
....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... +....... . .....
T Consensus 180 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~-l~~~~~~~-~-~~~~~ 254 (330)
T 3nsz_A 180 FYHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ-LVRIAKVL-G-TEDLY 254 (330)
T ss_dssp ECCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHH-HHHHHHHH-C-HHHHH
T ss_pred EcCCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHH-HHHHHHhc-C-Cchhh
Confidence 6644332 234578999999999977 67899999999999999999999999654432211 11111100 0 01111
Q ss_pred Hhc---------------CCccc-------CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 845 AAI---------------DPILE-------VNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 845 ~~~---------------~~~~~-------~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
+.+ ..... ...........+.+++.+||+.||++|||++|+++ ++++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~--hp~f~ 324 (330)
T 3nsz_A 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME--HPYFY 324 (330)
T ss_dssp HHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT--SGGGT
T ss_pred hHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc--CccHh
Confidence 110 00000 00001112357889999999999999999999987 45544
No 231
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.8e-37 Score=372.11 Aligned_cols=255 Identities=24% Similarity=0.303 Sum_probs=208.1
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 686 (959)
.++|+..+.||+|+||.||+|... +++.||||++++... .....+.+..|..++..+ +||+|+++++++.+.+..|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 467999999999999999999765 688999999875422 223456678899999988 79999999999999999999
Q ss_pred EEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 687 VYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 687 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.
T Consensus 420 V~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99999999999998652 468999999999999999999999 8999999999999999999999999999986
Q ss_pred CCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHh
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAA 846 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (959)
...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+... .+
T Consensus 492 ~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~----------------~i 554 (674)
T 3pfq_A 492 NIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ----------------SI 554 (674)
T ss_dssp CCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----------------HH
T ss_pred cccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHH----------------HH
Confidence 433222 2445789999999999999999999999999999999999999998865533211 11
Q ss_pred cCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCH-----HHHHHHHHHhHh
Q 002149 847 IDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDM-----GHAVNVLAPLVE 894 (959)
Q Consensus 847 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~ev~~~L~~~~~ 894 (959)
+......+. .....+.+|+.+||+.||++||++ +||.+ +++++
T Consensus 555 ~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~--h~ff~ 602 (674)
T 3pfq_A 555 MEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE--HAFFR 602 (674)
T ss_dssp HSSCCCCCT---TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS--SGGGS
T ss_pred HhCCCCCCc---cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc--Ccccc
Confidence 111111111 123467899999999999999997 66654 34443
No 232
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.1e-37 Score=338.32 Aligned_cols=258 Identities=23% Similarity=0.344 Sum_probs=202.1
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC--CCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR--HRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv 687 (959)
.++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|++++++++ |+||+++++++......++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 4679999999999999999998888999999999766556667788999999999997 59999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|| +.+++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++ +.+||+|||+++..
T Consensus 107 ~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EC-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred Ee-cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 99 5589999998642 468999999999999999999999 89999999999999965 89999999999865
Q ss_pred CCCCcc-eeecccccccccccccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHh
Q 002149 768 PDSERS-VVTRLAGTFGYLAPEYAVT-----------GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWN 835 (959)
Q Consensus 768 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~ 835 (959)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-------- 248 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-------- 248 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH--------
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH--------
Confidence 443221 2234578999999999875 46888999999999999999999999765432211
Q ss_pred hhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 836 IKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
+...++..... .........+.+++.+||+.||++||++.++++ +++++.
T Consensus 249 -------~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~--h~~~~~ 298 (313)
T 3cek_A 249 -------LHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA--HPYVQI 298 (313)
T ss_dssp -------HHHHHCTTSCC-CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SHHHHC
T ss_pred -------HHHHHhccccc-CCcccchHHHHHHHHHHccCCcccCcCHHHHhc--CccccC
Confidence 11111111110 000111246789999999999999999999987 455543
No 233
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=9.3e-37 Score=332.43 Aligned_cols=257 Identities=22% Similarity=0.358 Sum_probs=199.9
Q ss_pred CCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEEEe
Q 002149 612 NFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVYEY 690 (959)
Q Consensus 612 ~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 690 (959)
+|.....||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+++.++||||+++++++......++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 345556899999999999975 46889999998764 334457789999999999999999999999999999999999
Q ss_pred cCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC-CCcEEEeeccccccCCC
Q 002149 691 MPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD-DFRAKVSDFGLVKLAPD 769 (959)
Q Consensus 691 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~-~~~~ki~DfGla~~~~~ 769 (959)
+++++|.+++... .....+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++....
T Consensus 101 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 101 VPGGSLSALLRSK--WGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp CSEEEHHHHHHHT--TCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred CCCCCHHHHHHhh--ccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999998652 122457799999999999999999999 89999999999999987 89999999999986644
Q ss_pred CCcceeeccccccccccccccccCC--CCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 770 SERSVVTRLAGTFGYLAPEYAVTGK--ITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 770 ~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||............. .. ...
T Consensus 176 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~----------~~-~~~ 243 (295)
T 2clq_A 176 INP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV----------GM-FKV 243 (295)
T ss_dssp ------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH----------HH-HCC
T ss_pred CCC-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh----------cc-ccc
Confidence 222 223457899999999997653 7899999999999999999999997543322111000 00 001
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
.+.. .......+.+++.+||+.||++||++.++++ ++++.
T Consensus 244 ~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~--~~~~~ 283 (295)
T 2clq_A 244 HPEI-----PESMSAEAKAFILKCFEPDPDKRACANDLLV--DEFLK 283 (295)
T ss_dssp CCCC-----CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT--SGGGC
T ss_pred cccc-----cccCCHHHHHHHHHHccCChhhCCCHHHHhc--Chhhh
Confidence 1111 1112346789999999999999999999976 34443
No 234
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.1e-37 Score=352.81 Aligned_cols=264 Identities=23% Similarity=0.258 Sum_probs=202.8
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC--------CCCceeEEEEEE-
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR--------HRHLVSLLGYSV- 679 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~- 679 (959)
.++|++.++||+|+||.||+|.. .+++.||||++... ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 46899999999999999999965 46889999998743 445677889999999996 788999999987
Q ss_pred ---eCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCCEEECCCC-
Q 002149 680 ---AGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQ-SFIHRDLKSSNILLGDDF- 754 (959)
Q Consensus 680 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dik~~NiLl~~~~- 754 (959)
.+...++||||+ ++++.+.+... ....+++..+..++.||+.||+|||+ + +|+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~ 185 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKS---NYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQ 185 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccch
Confidence 556889999999 66776666442 23569999999999999999999999 7 999999999999999775
Q ss_pred ------------------------------------------------cEEEeeccccccCCCCCcceeecccccccccc
Q 002149 755 ------------------------------------------------RAKVSDFGLVKLAPDSERSVVTRLAGTFGYLA 786 (959)
Q Consensus 755 ------------------------------------------------~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~a 786 (959)
.+||+|||+++..... .....||+.|+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~a 261 (397)
T 1wak_A 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRS 261 (397)
T ss_dssp HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCC
T ss_pred hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccC
Confidence 7999999999865432 234578999999
Q ss_pred ccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHHhhhcchHHH-------HHhcCCcc----
Q 002149 787 PEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEE----RQYLAAWFWNIKSDKEKL-------RAAIDPIL---- 851 (959)
Q Consensus 787 PE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~-------~~~~~~~~---- 851 (959)
||++.+..++.++|||||||++|||++|+.||......+ ...+.............. ...+....
T Consensus 262 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1wak_A 262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH 341 (397)
T ss_dssp HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSS
T ss_pred ChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccc
Confidence 999999999999999999999999999999998654321 111111111100000000 00000000
Q ss_pred --------------cCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 852 --------------EVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 852 --------------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
............+.+|+.+||+.||++|||+.|+++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 001123455667889999999999999999999987
No 235
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2e-36 Score=342.34 Aligned_cols=271 Identities=20% Similarity=0.244 Sum_probs=208.5
Q ss_pred HhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC-CC-----CceeEEEEEEeC
Q 002149 609 VTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR-HR-----HLVSLLGYSVAG 681 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~ 681 (959)
+.++|++.+.||+|+||.||+|... +++.||||++... .....++.+|+.+++.++ |+ +|+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 4578999999999999999999765 6889999998743 344567888999999885 55 499999999999
Q ss_pred ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC--CCCcEEEe
Q 002149 682 YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLG--DDFRAKVS 759 (959)
Q Consensus 682 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~--~~~~~ki~ 759 (959)
...++||||+ +|+|.+++... ....+++..+..++.|++.||+|||+. +.+||||||||+|||++ .++.+||+
T Consensus 129 ~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 129 NHLCLVFEML-SYNLYDLLRNT---NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred CceEEEEecC-CCCHHHHHhhc---CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 9999999999 56999998652 235689999999999999999999951 27999999999999995 47889999
Q ss_pred eccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD 839 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 839 (959)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+....+. ......
T Consensus 204 DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~--~~~~~~ 277 (382)
T 2vx3_A 204 DFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV--EVLGIP 277 (382)
T ss_dssp CCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HHHCSC
T ss_pred eccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--HHhCCC
Confidence 99999876432 234678999999999999999999999999999999999999999876554322211 111100
Q ss_pred hHH-------HHHhcCCccc----------------------------------------CCCCCHHHHHHHHHHHHhcc
Q 002149 840 KEK-------LRAAIDPILE----------------------------------------VNDDTFETFWTIAELAGHCT 872 (959)
Q Consensus 840 ~~~-------~~~~~~~~~~----------------------------------------~~~~~~~~~~~l~~l~~~cl 872 (959)
... .+..++.... ...........+.+|+.+||
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL 357 (382)
T 2vx3_A 278 PAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRML 357 (382)
T ss_dssp CHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHT
T ss_pred CHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhc
Confidence 000 1111111000 00111233457889999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhHhh
Q 002149 873 SREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 873 ~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
+.||++|||+.|+++ ++++.+
T Consensus 358 ~~dP~~Rpta~e~L~--hp~f~~ 378 (382)
T 2vx3_A 358 DYDPKTRIQPYYALQ--HSFFKK 378 (382)
T ss_dssp CSCTTTSCCHHHHTT--SGGGCC
T ss_pred CCChhhCCCHHHHhc--Cccccc
Confidence 999999999999987 455543
No 236
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.1e-38 Score=343.80 Aligned_cols=265 Identities=26% Similarity=0.393 Sum_probs=187.9
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh-cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 56899999999999999999964 468999999886542 2344567889999999999999999999999999999999
Q ss_pred EecCCCchhhHHhhccc---CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 689 EYMPQGALSKHIFHWKS---LNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
||+++|+|.+++..... .....+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999864221 123568999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCc----ceeecccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcch
Q 002149 766 LAPDSER----SVVTRLAGTFGYLAPEYAVT-GKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDK 840 (959)
Q Consensus 766 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 840 (959)
....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ .. ...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~~---~~~ 244 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT--LQ---NDP 244 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH--HT---SSC
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH--hc---cCC
Confidence 6543221 12234578999999999876 56899999999999999999999999877654321110 00 000
Q ss_pred HHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 841 EKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
...... .............+.+++.+||+.||++||++.++++
T Consensus 245 ~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 245 PSLETG----VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCTTC---------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cccccc----cccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 000000 0000000112236789999999999999999999987
No 237
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.5e-36 Score=331.31 Aligned_cols=261 Identities=25% Similarity=0.302 Sum_probs=208.0
Q ss_pred HHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccc---c----HHHHHHHHHHHHHHHhcC-CCCceeEEEEE
Q 002149 608 NVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI---S----KKAVDEFHSEIAVLSKVR-HRHLVSLLGYS 678 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~---~----~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 678 (959)
...++|+..+.||+|+||.||+|... +|+.||||++..... . ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999765 689999999865421 1 233567889999999995 99999999999
Q ss_pred EeCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEE
Q 002149 679 VAGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKV 758 (959)
Q Consensus 679 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki 758 (959)
......++||||+++++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl 165 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKL 165 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEE
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEE
Confidence 9999999999999999999998542 468999999999999999999999 89999999999999999999999
Q ss_pred eeccccccCCCCCcceeeccccccccccccccc------cCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 002149 759 SDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAV------TGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAW 832 (959)
Q Consensus 759 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~ 832 (959)
+|||+++...... ......||+.|+|||++. ...++.++||||||+++|||++|+.||......+.....
T Consensus 166 ~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-- 241 (298)
T 1phk_A 166 TDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI-- 241 (298)
T ss_dssp CCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--
T ss_pred ecccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHH--
Confidence 9999998654432 233457899999999985 456889999999999999999999999876543321110
Q ss_pred HHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 833 FWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
.. ..... . ..........+.+++.+||+.||++||++.++++ ++++++
T Consensus 242 -~~---------~~~~~--~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~--h~~~~~ 289 (298)
T 1phk_A 242 -MS---------GNYQF--G-SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA--HPFFQQ 289 (298)
T ss_dssp -HH---------TCCCC--C-TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT--SGGGCT
T ss_pred -hc---------CCccc--C-cccccccCHHHHHHHHHHccCCcccCCCHHHHHh--ChHhhh
Confidence 00 00000 0 0001122346889999999999999999999976 455543
No 238
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=335.87 Aligned_cols=258 Identities=26% Similarity=0.398 Sum_probs=200.3
Q ss_pred HHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEe-----
Q 002149 608 NVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVA----- 680 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----- 680 (959)
...++|++.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 4467899999999999999999976 478999999986542 2345788999999999 79999999999987
Q ss_pred -CceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEe
Q 002149 681 -GYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVS 759 (959)
Q Consensus 681 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~ 759 (959)
....++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEEC
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEe
Confidence 467899999999999999986532 2568999999999999999999999 899999999999999999999999
Q ss_pred eccccccCCCCCcceeeccccccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHH
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAV-----TGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFW 834 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~ 834 (959)
|||++........ ......||+.|+|||++. +..++.++|||||||++|||++|+.||............
T Consensus 172 Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---- 246 (326)
T 2x7f_A 172 DFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---- 246 (326)
T ss_dssp CCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----
T ss_pred eCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh----
Confidence 9999986543221 223457899999999987 567899999999999999999999999876653321110
Q ss_pred hhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHh
Q 002149 835 NIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVE 894 (959)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 894 (959)
.....+..... .....+.+++.+||..||++||++.++++ ++++.
T Consensus 247 ---------~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~--hp~~~ 291 (326)
T 2x7f_A 247 ---------PRNPAPRLKSK----KWSKKFQSFIESCLVKNHSQRPATEQLMK--HPFIR 291 (326)
T ss_dssp ---------HHSCCCCCSCS----CSCHHHHHHHHHHCCSSGGGSCCHHHHHT--SHHHH
T ss_pred ---------hcCccccCCcc----ccCHHHHHHHHHHhccChhhCCCHHHHhh--ChHHh
Confidence 01011111101 11246889999999999999999999987 45554
No 239
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=5.6e-37 Score=338.64 Aligned_cols=255 Identities=25% Similarity=0.335 Sum_probs=196.4
Q ss_pred HHhcCCcccCcccccCceEEEEEEEc-CCcEEEEEEccccccc------HHHHHHHHHHHHHHHhcCCCCceeEEEEEEe
Q 002149 608 NVTKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVIS------KKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA 680 (959)
Q Consensus 608 ~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 680 (959)
.+.++|.+.+.||+|+||.||+|... +++.||||++...... ......+.+|+++++.++||||+++++++..
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 34568999999999999999999764 6889999998754221 1223458899999999999999999999876
Q ss_pred CceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCc---EE
Q 002149 681 GYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFR---AK 757 (959)
Q Consensus 681 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~---~k 757 (959)
.. .++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.++. +|
T Consensus 87 ~~-~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~k 157 (322)
T 2ycf_A 87 ED-YYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIK 157 (322)
T ss_dssp SS-EEEEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEE
T ss_pred Cc-eEEEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEE
Confidence 65 8999999999999998843 2568999999999999999999999 89999999999999987654 99
Q ss_pred EeeccccccCCCCCcceeeccccccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHH
Q 002149 758 VSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAV---TGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFW 834 (959)
Q Consensus 758 i~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~ 834 (959)
|+|||+++...... ......||+.|+|||++. ...++.++|||||||++|||++|..||........ +...+.
T Consensus 158 l~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~ 233 (322)
T 2ycf_A 158 ITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQIT 233 (322)
T ss_dssp ECCCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHHHHH
T ss_pred EccCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHHHHH
Confidence 99999998764422 223457899999999974 46788999999999999999999999976543211 111010
Q ss_pred hhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 835 NIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
..... ...... ......+.+++.+||+.||++||++.++++
T Consensus 234 ~~~~~--~~~~~~----------~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 SGKYN--FIPEVW----------AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HTCCC--CCHHHH----------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hCccc--cCchhh----------hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00000 000000 011236789999999999999999999976
No 240
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.6e-36 Score=337.04 Aligned_cols=270 Identities=20% Similarity=0.293 Sum_probs=208.3
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CC-cEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCC------ceeEEEEEEeC
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DG-TKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRH------LVSLLGYSVAG 681 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~ 681 (959)
.++|++.+.||+|+||.||+|... ++ +.||||++... ....+.+.+|+++++.++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 468999999999999999999764 34 68999998743 345667889999999997765 89999999999
Q ss_pred ceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE-----------
Q 002149 682 YERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILL----------- 750 (959)
Q Consensus 682 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl----------- 750 (959)
...++||||+ ++++.+++.. .....+++.++..++.||+.||+|||+ ++|+||||||+|||+
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKE---NNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECC
T ss_pred CeEEEEEecc-CCChHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccc
Confidence 9999999999 7777777754 223568999999999999999999999 899999999999999
Q ss_pred --------CCCCcEEEeeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 002149 751 --------GDDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESR 822 (959)
Q Consensus 751 --------~~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~ 822 (959)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 56789999999999865432 234579999999999999999999999999999999999999999876
Q ss_pred hHHHHHHHHHHHhhhcc-------------------------hHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCC
Q 002149 823 PEERQYLAAWFWNIKSD-------------------------KEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPS 877 (959)
Q Consensus 823 ~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 877 (959)
..+.............. .........+..............+.+++.+||+.||+
T Consensus 244 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 244 NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 55433222111110000 00011111111111122233455788999999999999
Q ss_pred CCCCHHHHHHHHHHhHhh
Q 002149 878 QRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 878 ~RPt~~ev~~~L~~~~~~ 895 (959)
+|||+.|+++ ++++..
T Consensus 324 ~Rpt~~e~l~--hp~f~~ 339 (355)
T 2eu9_A 324 QRITLAEALL--HPFFAG 339 (355)
T ss_dssp TSCCHHHHTT--SGGGGG
T ss_pred hCcCHHHHhc--ChhhcC
Confidence 9999999976 455554
No 241
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2e-36 Score=331.07 Aligned_cols=252 Identities=23% Similarity=0.353 Sum_probs=192.6
Q ss_pred HhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe-------
Q 002149 609 VTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA------- 680 (959)
Q Consensus 609 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 680 (959)
..++|+..+.||+|+||.||+|.. .+++.||||++.. .....+.+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 356799999999999999999976 4789999999864 34556788999999999999999999998865
Q ss_pred ------CceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC
Q 002149 681 ------GYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDF 754 (959)
Q Consensus 681 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~ 754 (959)
....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTS
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCC
Confidence 45678999999999999999642 2467889999999999999999999 8999999999999999999
Q ss_pred cEEEeeccccccCCCCC-------------cceeeccccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCC
Q 002149 755 RAKVSDFGLVKLAPDSE-------------RSVVTRLAGTFGYLAPEYAVTG-KITTKVDVFSFGVVLMELLTGLMALDE 820 (959)
Q Consensus 755 ~~ki~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~ll~elltg~~p~~~ 820 (959)
.+||+|||+++...... ........||+.|+|||++.+. .++.++|||||||++|||++ ||..
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 99999999998654321 1122345789999999999764 78999999999999999998 4432
Q ss_pred CChHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 821 SRPEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
. .+.......+ .. ...... ..........+.+++.+||+.||++|||+.++++
T Consensus 231 ~--~~~~~~~~~~----------~~-~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 231 G--MERVNILKKL----------RS-VSIEFP-PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp H--HHHHHHHHHH----------HS-TTCCCC-TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred c--hhHHHHHHhc----------cc-cccccC-ccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1 1111111111 00 000111 1112223346789999999999999999999987
No 242
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.6e-37 Score=342.68 Aligned_cols=267 Identities=20% Similarity=0.300 Sum_probs=204.7
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHH---------------HHHHHHHHHHHHHhcCCCCceeE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKK---------------AVDEFHSEIAVLSKVRHRHLVSL 674 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~E~~~l~~l~h~niv~l 674 (959)
.++|++.+.||+|+||.||+|.. +|+.||||++........ ..+.+.+|+++++.++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999988 899999999875422111 12778999999999999999999
Q ss_pred EEEEEeCceEEEEEEecCCCchhhHHhhc---ccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC
Q 002149 675 LGYSVAGYERLLVYEYMPQGALSKHIFHW---KSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLG 751 (959)
Q Consensus 675 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~ 751 (959)
++++.+.+..++||||+++|+|.+++... .......+++..+..++.|++.||+|||+. ++|+||||||+||+++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMD 186 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT--SCEECCCCCGGGEEEC
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhcc--CCEeecCCChHhEEEc
Confidence 99999999999999999999999983211 112246799999999999999999999972 6999999999999999
Q ss_pred CCCcEEEeeccccccCCCCCcceeeccccccccccccccccC-CCCc-cchHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 002149 752 DDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTG-KITT-KVDVFSFGVVLMELLTGLMALDESRPEERQYL 829 (959)
Q Consensus 752 ~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~ 829 (959)
.++.+||+|||+++..... ......||+.|+|||++.+. .++. ++|||||||++|||++|+.||........ .
T Consensus 187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~ 261 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE--L 261 (348)
T ss_dssp TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH--H
T ss_pred CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH--H
Confidence 9999999999999865433 33456799999999999887 6666 99999999999999999999987654211 1
Q ss_pred HHHHHhhhcchHHHHH----hcCCcccC--CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 830 AAWFWNIKSDKEKLRA----AIDPILEV--NDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
...+. ........ ...+.... ..........+.+++.+||+.||++||++.++++
T Consensus 262 ~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 FNNIR---TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHT---SCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHh---ccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11110 00000000 00000000 0000122346789999999999999999999987
No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.3e-36 Score=349.04 Aligned_cols=254 Identities=24% Similarity=0.304 Sum_probs=189.3
Q ss_pred cCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 689 (959)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++.+ +||||+++++++.+....++|||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 456667889999999998877778999999988643 234578899999987 89999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC-------------C
Q 002149 690 YMPQGALSKHIFHWKSLNL--EPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDD-------------F 754 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~-------------~ 754 (959)
|+ +|+|.+++........ ...++..++.++.||+.||+|||+ .+|+||||||+|||++.+ +
T Consensus 90 ~~-~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 90 LC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CC-SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred cC-CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCce
Confidence 99 5799999965322111 112344567899999999999999 899999999999999654 4
Q ss_pred cEEEeeccccccCCCCCcc---eeecccccccccccccccc-------CCCCccchHHHHHHHHHHHHh-CCCCCCCCCh
Q 002149 755 RAKVSDFGLVKLAPDSERS---VVTRLAGTFGYLAPEYAVT-------GKITTKVDVFSFGVVLMELLT-GLMALDESRP 823 (959)
Q Consensus 755 ~~ki~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~ 823 (959)
.+||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.....
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~ 245 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence 8999999999876543321 1234579999999999965 678999999999999999999 9999976544
Q ss_pred HHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 824 EERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
.+.. + . ....................+.+++.+||+.||++||++.++++
T Consensus 246 ~~~~-i---~----------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 246 RESN-I---I----------RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHH-H---H----------HTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hHHH-H---h----------cCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 3211 0 0 11111100011123345568899999999999999999999986
No 244
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=7.6e-37 Score=338.40 Aligned_cols=262 Identities=25% Similarity=0.335 Sum_probs=184.0
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHH-HHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIA-VLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|...+.||+|+||.||+|... +|+.||||++.... ......++.+|+. +++.++||||+++++++......++|
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 367889999999999999999764 78999999997653 3344455666666 66777999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQ-SFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
|||++ |+|.+++..........+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 100 MELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp ECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 99996 588877754333334679999999999999999999999 7 999999999999999999999999999986
Q ss_pred CCCCCcceeecccccccccccccc----ccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 767 APDSERSVVTRLAGTFGYLAPEYA----VTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 767 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
...... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||........ .
T Consensus 176 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---------------~ 238 (327)
T 3aln_A 176 LVDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD---------------Q 238 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------------------
T ss_pred cccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH---------------H
Confidence 544322 2334789999999998 456789999999999999999999999986432110 0
Q ss_pred HHHhcCCccc-C-CCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 843 LRAAIDPILE-V-NDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 843 ~~~~~~~~~~-~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
+...+..... . ..........+.+++.+||+.||++||++.++++ ++++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~--hp~~~~ 291 (327)
T 3aln_A 239 LTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK--HPFILM 291 (327)
T ss_dssp -CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT--SHHHHH
T ss_pred HHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh--ChHHHH
Confidence 1111111100 0 0011122346889999999999999999999987 455543
No 245
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=5.3e-36 Score=338.20 Aligned_cols=270 Identities=20% Similarity=0.287 Sum_probs=204.1
Q ss_pred cCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC-----------CCCceeEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR-----------HRHLVSLLGYS 678 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~ 678 (959)
++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++++++ |+||+++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 5799999999999999999975 57899999998743 344567889999999886 89999999998
Q ss_pred EeCc----eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCCEEEC--
Q 002149 679 VAGY----ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQ-SFIHRDLKSSNILLG-- 751 (959)
Q Consensus 679 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dik~~NiLl~-- 751 (959)
.... ..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+ + +|+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEE
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEecc
Confidence 7654 789999999 999999986532 3568999999999999999999999 7 999999999999994
Q ss_pred ----CCCcEEEeeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHH--
Q 002149 752 ----DDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEE-- 825 (959)
Q Consensus 752 ----~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~-- 825 (959)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 244 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT 244 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred CCCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccC
Confidence 4458999999999866432 234578999999999999999999999999999999999999998654221
Q ss_pred --HHHHHHHHHhhhcchHH-------HHHhcCCc------------------ccCCCCCHHHHHHHHHHHHhcccCCCCC
Q 002149 826 --RQYLAAWFWNIKSDKEK-------LRAAIDPI------------------LEVNDDTFETFWTIAELAGHCTSREPSQ 878 (959)
Q Consensus 826 --~~~~~~~~~~~~~~~~~-------~~~~~~~~------------------~~~~~~~~~~~~~l~~l~~~cl~~dP~~ 878 (959)
...+...+......... ....+... .............+.+++.+||+.||++
T Consensus 245 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 324 (373)
T 1q8y_A 245 KDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRK 324 (373)
T ss_dssp CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTT
T ss_pred ChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccc
Confidence 11111111111100000 00011000 0001223456678899999999999999
Q ss_pred CCCHHHHHHHHHHhHhhc
Q 002149 879 RPDMGHAVNVLAPLVEKW 896 (959)
Q Consensus 879 RPt~~ev~~~L~~~~~~~ 896 (959)
|||+.|+++ ++++...
T Consensus 325 Rpt~~ell~--hp~f~~~ 340 (373)
T 1q8y_A 325 RADAGGLVN--HPWLKDT 340 (373)
T ss_dssp CBCHHHHHT--CGGGTTC
T ss_pred cCCHHHHhh--Chhhhcc
Confidence 999999987 5666553
No 246
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=8.4e-37 Score=336.63 Aligned_cols=262 Identities=23% Similarity=0.361 Sum_probs=187.1
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 688 (959)
.++|+..+.||+|+||.||+|... +|+.||||++..........+.+.++..+++.++||||+++++++......++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 357889999999999999999775 7899999999765433444444555666788889999999999999999999999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQ-SFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
||+ ++.+..+.... ...+++..+..++.|++.||+|||+ + +|+||||||+||+++.++.+||+|||+++..
T Consensus 104 e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp CCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred ecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 999 55555554321 2568999999999999999999998 5 9999999999999999999999999999765
Q ss_pred CCCCcceeeccccccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAV-----TGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||........ .+....
T Consensus 176 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~--------- 243 (318)
T 2dyl_A 176 VDDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE-VLTKVL--------- 243 (318)
T ss_dssp -------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-HHHHHH---------
T ss_pred cCCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH-HHHHHh---------
Confidence 4432 223457899999999984 45788999999999999999999999986443221 111000
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcCC
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWKP 898 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 898 (959)
....+... ........+.+++.+||+.||.+||++.++++ +++++.+..
T Consensus 244 --~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~--h~~~~~~~~ 292 (318)
T 2dyl_A 244 --QEEPPLLP---GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE--HSFIKRYET 292 (318)
T ss_dssp --HSCCCCCC---SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT--SHHHHHHHH
T ss_pred --ccCCCCCC---ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh--CHHHHhccc
Confidence 00011111 01112346789999999999999999999987 466655433
No 247
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.2e-36 Score=335.54 Aligned_cols=261 Identities=23% Similarity=0.272 Sum_probs=176.7
Q ss_pred HhcCCcccC-cccccCceEEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe----Cc
Q 002149 609 VTKNFASEN-ELGRGGFGVVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA----GY 682 (959)
Q Consensus 609 ~~~~~~~~~-~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~ 682 (959)
+.++|.+.+ .||+|+||.||+|... +|+.||||++... .... .+....++.++||||+++++++.. ..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PKAR---QEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HHHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HHHH---HHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 456888854 6999999999999765 7899999998643 2221 222334566799999999999876 45
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---CCcEEEe
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD---DFRAKVS 759 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~---~~~~ki~ 759 (959)
..++||||+++|+|.+++... ....+++.+++.++.||+.||+|||+ ++|+||||||+||+++. ++.+||+
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQER---GDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred eEEEEEeccCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEe
Confidence 579999999999999999642 23579999999999999999999999 89999999999999976 4559999
Q ss_pred eccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD 839 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 839 (959)
|||+++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||............ ....
T Consensus 174 Dfg~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~~~~--- 245 (336)
T 3fhr_A 174 DFGFAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM--KRRI--- 245 (336)
T ss_dssp CCTTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------
T ss_pred ccccceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH--HHhh---
Confidence 999998654322 23457899999999998889999999999999999999999999765432210000 0000
Q ss_pred hHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 840 KEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
..... ... ..........+.+++.+||+.||++|||+.++++ ++++....
T Consensus 246 --~~~~~---~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~~~~~~ 295 (336)
T 3fhr_A 246 --RLGQY---GFP-NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN--HPWINQSM 295 (336)
T ss_dssp ----------CCC-TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH--SHHHHTGG
T ss_pred --hcccc---ccC-chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc--Cccccccc
Confidence 00000 000 0001122346789999999999999999999988 56666543
No 248
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=366.80 Aligned_cols=389 Identities=20% Similarity=0.195 Sum_probs=260.7
Q ss_pred cceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCC-C-CccCCCCccEEecCCCCCCCCChhhhcCC
Q 002149 72 KHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGEL-P-SFSGLSNLKYAYLDGNNFDTIPADFFDGL 149 (959)
Q Consensus 72 ~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~-~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 149 (959)
..|-+-..+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ | .|.++++|++|+|++|+|+.+++..|.++
T Consensus 17 ~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l 96 (844)
T 3j0a_A 17 TQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGL 96 (844)
T ss_dssp SCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSC
T ss_pred CCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCC
Confidence 333332357889999999999888899999999999999999665544 4 68999999999999999999988889999
Q ss_pred CCCcEEEccCcccCCCCCCCCCcc--ccCccccCeecccccccCCCCC-hhhcCCCCCCEEEecCCcCCCCCCcccccC-
Q 002149 150 ENLQVLALDSNNFNASKGWSFPKG--LQSSAQLTNLSCMSCNLAGQLP-DFLGNFASLQNLKLSGNNLTGPIPESFKGL- 225 (959)
Q Consensus 150 ~~L~~L~Ls~N~l~~~~~~~lp~~--l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l- 225 (959)
++|++|+|++|.+++ .+|.. +.++++|+.|++++|++.+..+ ..|+++++|++|+|++|.+++..+..+..+
T Consensus 97 ~~L~~L~Ls~n~l~~----~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 97 FHLFELRLYFCGLSD----AVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp SSCCCEECTTCCCSS----CCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred cccCEeeCcCCCCCc----ccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 999999999999875 34444 7889999999999999987655 578899999999999998887766554322
Q ss_pred --C------------------------------cccccccccCC------------------------------------
Q 002149 226 --N------------------------------LVNLWLNDQKG------------------------------------ 237 (959)
Q Consensus 226 --~------------------------------l~~L~~~~~~~------------------------------------ 237 (959)
+ +..|.+.++..
T Consensus 173 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l 252 (844)
T 3j0a_A 173 GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNI 252 (844)
T ss_dssp HCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSS
T ss_pred CCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccccc
Confidence 1 23333332210
Q ss_pred -----------------------CCcccc-cccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCcc
Q 002149 238 -----------------------GGFTGT-IDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPP 293 (959)
Q Consensus 238 -----------------------~~l~~~-~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 293 (959)
+.+.+. ...+.++++|+.|+|++|++++..|..|..+++|++|+|++|++++..|.
T Consensus 253 ~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 332 (844)
T 3j0a_A 253 KDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSS 332 (844)
T ss_dssp TTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSC
T ss_pred CCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHH
Confidence 011111 12355667777777777777776777777777777777777777777677
Q ss_pred ccccc-cCCeEeCCCCcCCCCCCccc-----ccccccccCcccCCCC---------------CCCCchhhH---------
Q 002149 294 SLASL-SLDHLDLNNNMFMGPVPKSK-----AYKYSYSSNAFCQPTE---------------GVPCAPEVM--------- 343 (959)
Q Consensus 294 ~~~~~-~L~~L~L~~N~l~~~ip~~~-----~~~~~~~~~~~~~~~~---------------~~~~~~~~~--------- 343 (959)
.+..+ +|+.|+|++|.+++..+..+ ...+.+++|.+..... .++......
T Consensus 333 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~ 412 (844)
T 3j0a_A 333 NFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENR 412 (844)
T ss_dssp SCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCC
T ss_pred HhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCc
Confidence 77666 47777777777765544322 1223344444433211 000000000
Q ss_pred ----HHHhhccCCCC----------------------CcccccccCCCCCCC-----cccccccCCCCcccEEECCCCcc
Q 002149 344 ----ALIDFLGGLNY----------------------PPRLVTSWSGNDPCK-----SWLGLSCGTNSKLTVLNLPNFNL 392 (959)
Q Consensus 344 ----~~~~~~~~~~~----------------------~~~l~~~~~~~~~~~-----~~~~~~~~~~~~L~~L~Ls~N~l 392 (959)
.....+..+.. .+.+.......+... ......+..+++|+.|+|++|+|
T Consensus 413 l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 492 (844)
T 3j0a_A 413 LENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492 (844)
T ss_dssp CCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHH
T ss_pred cccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcc
Confidence 00000000000 011111111111111 11112355678888888888888
Q ss_pred cccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCCC-CCCcceecccCCCCCCCCCC
Q 002149 393 SGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLPK-FSGAVKLSLDGNPLLNGKSP 466 (959)
Q Consensus 393 ~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~~~l~~N~~~c~~~~ 466 (959)
++..|..|.++++|++|+|++|+|++..|..+. ++|+.|||++|+|++.+|. +.++..+.+.+|||.|....
T Consensus 493 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 493 NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp TTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred cccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 888888888888899999999988876666665 7888999999999888876 55778899999999997643
No 249
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.5e-36 Score=342.71 Aligned_cols=248 Identities=24% Similarity=0.325 Sum_probs=187.2
Q ss_pred cCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLLVYE 689 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 689 (959)
.+|...+.||+|+||+||.....+++.||||++..... ..+.+|+++++.+ +|||||++++++.+....++|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 46888899999999997666666799999999865422 2356899999999 79999999999999999999999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC-----CCcEEEeecccc
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD-----DFRAKVSDFGLV 764 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~-----~~~~ki~DfGla 764 (959)
|+ +|+|.+++.... ....+..++.++.||+.||+|||+ .+|+||||||+|||++. ...+||+|||+|
T Consensus 99 ~~-~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 99 LC-AATLQEYVEQKD----FAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp CC-SEEHHHHHHSSS----CCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred CC-CCCHHHHHHhcC----CCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 99 579999986422 234445667899999999999999 89999999999999953 346889999999
Q ss_pred ccCCCCCc--ceeeccccccccccccccc---cCCCCccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHhhhc
Q 002149 765 KLAPDSER--SVVTRLAGTFGYLAPEYAV---TGKITTKVDVFSFGVVLMELLT-GLMALDESRPEERQYLAAWFWNIKS 838 (959)
Q Consensus 765 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~ll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 838 (959)
+....... .......||+.|+|||++. ...++.++|||||||++|||++ |..||...........
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~--------- 241 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL--------- 241 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH---------
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH---------
Confidence 86643321 2234467999999999997 4567889999999999999999 9999965543221100
Q ss_pred chHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 839 DKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
... ...............+.+++.+||+.||++||++.+|++
T Consensus 242 -----~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 242 -----LGA--CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -----TTC--CCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----hcc--CCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 000 001111112233445779999999999999999999985
No 250
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.6e-36 Score=330.76 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=199.7
Q ss_pred HHHHHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccH----HHHHHHHHHHHHHHhcC--CCCceeEEEE
Q 002149 605 VLRNVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISK----KAVDEFHSEIAVLSKVR--HRHLVSLLGY 677 (959)
Q Consensus 605 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~--h~niv~l~~~ 677 (959)
+.....++|++.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|+.+++.++ |+||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 3445678899999999999999999975 578999999987653222 12245678999999996 5999999999
Q ss_pred EEeCceEEEEEEecCC-CchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC-CCCc
Q 002149 678 SVAGYERLLVYEYMPQ-GALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLG-DDFR 755 (959)
Q Consensus 678 ~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~-~~~~ 755 (959)
+......++|||++.+ ++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~ 188 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGE 188 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTE
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCC
Confidence 9999999999999976 8999998542 468999999999999999999999 8999999999999999 7899
Q ss_pred EEEeeccccccCCCCCcceeeccccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHH
Q 002149 756 AKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKI-TTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFW 834 (959)
Q Consensus 756 ~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~ 834 (959)
+||+|||+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... .
T Consensus 189 ~kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~----- 255 (320)
T 3a99_A 189 LKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----I----- 255 (320)
T ss_dssp EEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----H-----
T ss_pred EEEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----h-----
Confidence 9999999998665432 234579999999999987766 6789999999999999999999975311 0
Q ss_pred hhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 835 NIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
...... .. . .....+.+++.+||+.||++||++.++++
T Consensus 256 --------~~~~~~--~~-~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 256 --------IRGQVF--FR-Q----RVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp --------HHCCCC--CS-S----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --------hccccc--cc-c----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000 00 1 11236789999999999999999999976
No 251
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-35 Score=341.70 Aligned_cols=297 Identities=25% Similarity=0.300 Sum_probs=181.8
Q ss_pred EEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccC
Q 002149 81 VTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDS 159 (959)
Q Consensus 81 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 159 (959)
++.|+|++|++++..+..|.++++|++|+|++|.|++..| .|.++++|++|+|++|+|+.+++..|.++++|++|+|++
T Consensus 34 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 113 (477)
T 2id5_A 34 TRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 113 (477)
T ss_dssp CSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTT
T ss_pred CcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCC
Confidence 4455555555554444555555555555555555555444 355555555555555555555555555555555555555
Q ss_pred cccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCC
Q 002149 160 NNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGG 239 (959)
Q Consensus 160 N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~ 239 (959)
|++.. ..|..+..+++|+.|++++|++.+..+..|.++++|+.|+|++|++++..+..
T Consensus 114 n~i~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~------------------ 171 (477)
T 2id5_A 114 NKIVI----LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA------------------ 171 (477)
T ss_dssp SCCCE----ECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH------------------
T ss_pred Ccccc----CChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH------------------
Confidence 55543 22334455555555555555555554555555555555555555555333322
Q ss_pred cccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccc-cccccCCeEeCCCCcCCCCCCccc
Q 002149 240 FTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPS-LASLSLDHLDLNNNMFMGPVPKSK 318 (959)
Q Consensus 240 l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~L~~L~L~~N~l~~~ip~~~ 318 (959)
+.++++|+.|+|++|.+++..+..|..+++|++|+|++|.+.+.+|.. +...+|+.|+|++|.+++ +|.
T Consensus 172 -------l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~-- 241 (477)
T 2id5_A 172 -------LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA-VPY-- 241 (477)
T ss_dssp -------HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCS-CCH--
T ss_pred -------hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccc-cCH--
Confidence 455666777777777776666666666677777777766655544433 223356777777766653 221
Q ss_pred ccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCc
Q 002149 319 AYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSP 398 (959)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~ 398 (959)
..+..+++|+.|+|++|++.+..+.
T Consensus 242 -------------------------------------------------------~~~~~l~~L~~L~Ls~n~l~~~~~~ 266 (477)
T 2id5_A 242 -------------------------------------------------------LAVRHLVYLRFLNLSYNPISTIEGS 266 (477)
T ss_dssp -------------------------------------------------------HHHTTCTTCCEEECCSSCCCEECTT
T ss_pred -------------------------------------------------------HHhcCccccCeeECCCCcCCccChh
Confidence 1123457788888888888877777
Q ss_pred cccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCCC----CCCcceecccCCCCCCCC
Q 002149 399 SVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLPK----FSGAVKLSLDGNPLLNGK 464 (959)
Q Consensus 399 ~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~~~~~l~~N~~~c~~ 464 (959)
.|.++++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+. +.++..+.+.+|||.|..
T Consensus 267 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 267 MLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp SCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred hccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 888888888888888888887788888888888888888888876553 245667788888888764
No 252
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=326.59 Aligned_cols=245 Identities=26% Similarity=0.373 Sum_probs=190.8
Q ss_pred HHHhcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccH----HHHHHHHHHHHHHHhc----CCCCceeEEEE
Q 002149 607 RNVTKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISK----KAVDEFHSEIAVLSKV----RHRHLVSLLGY 677 (959)
Q Consensus 607 ~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l----~h~niv~l~~~ 677 (959)
....++|+..+.||+|+||.||+|.. .+++.||||++....... .....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 45567899999999999999999975 468899999987543222 1233456799999999 89999999999
Q ss_pred EEeCceEEEEEEe-cCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC-CCCc
Q 002149 678 SVAGYERLLVYEY-MPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLG-DDFR 755 (959)
Q Consensus 678 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~-~~~~ 755 (959)
+...+..++|||| +.+++|.+++... ..+++..++.++.||+.||+|||+ .+|+||||||+||+++ .++.
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCe
Confidence 9999999999999 7899999998652 458999999999999999999999 8999999999999999 8899
Q ss_pred EEEeeccccccCCCCCcceeeccccccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHH
Q 002149 756 AKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKIT-TKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFW 834 (959)
Q Consensus 756 ~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~ 834 (959)
+||+|||+++...... .....||+.|+|||++.+..+. .++|||||||++|||++|+.||..... .
T Consensus 179 ~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~----- 245 (312)
T 2iwi_A 179 AKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-----I----- 245 (312)
T ss_dssp EEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----H-----
T ss_pred EEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-----H-----
Confidence 9999999998665432 2345789999999999877664 589999999999999999999975211 0
Q ss_pred hhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 835 NIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
... ..... ......+.+++.+||+.||++||++.++++
T Consensus 246 --------~~~----~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 246 --------LEA----ELHFP---AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp --------HHT----CCCCC---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred --------hhh----ccCCc---ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 00000 112236789999999999999999999987
No 253
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=6.4e-36 Score=351.69 Aligned_cols=272 Identities=26% Similarity=0.373 Sum_probs=204.6
Q ss_pred hcCCcccCcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe------Cc
Q 002149 610 TKNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA------GY 682 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 682 (959)
.++|++.+.||+|+||.||+|.. .+|+.||||++... ......+.+.+|+++++.++||||+++++++.. +.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 36899999999999999999975 46899999998764 355667789999999999999999999998755 66
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCc---EEEe
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFR---AKVS 759 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~---~ki~ 759 (959)
..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~--~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFE--NCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSS--CTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred eEEEEEEeCCCCCHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEc
Confidence 7799999999999999986532 22468999999999999999999999 89999999999999987665 9999
Q ss_pred eccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD 839 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 839 (959)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|..||........ |.......
T Consensus 167 DFG~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~-----~~~~i~~~ 239 (676)
T 3qa8_A 167 DLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ-----WHGKVREK 239 (676)
T ss_dssp SCCCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHH-----SSTTCC--
T ss_pred cccccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhh-----hhhhhhcc
Confidence 999998665432 23446799999999999999999999999999999999999999976532211 10000000
Q ss_pred hHH---HHHhcC------Cccc-CCCCCHHHHHHHHHHHHhcccCCCCCCCCHHH-----HHHHHHHhHh
Q 002149 840 KEK---LRAAID------PILE-VNDDTFETFWTIAELAGHCTSREPSQRPDMGH-----AVNVLAPLVE 894 (959)
Q Consensus 840 ~~~---~~~~~~------~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e-----v~~~L~~~~~ 894 (959)
... ...... .... ...........+.+++.+||..||++|||+.+ ..+.+..++.
T Consensus 240 ~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 240 SNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp ----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred cchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 000 000000 0101 11223345668899999999999999999988 4455555554
No 254
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.5e-34 Score=348.24 Aligned_cols=367 Identities=20% Similarity=0.183 Sum_probs=284.4
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.|+|+++.+++..+..|.++++|++|+|++|.+++..| .|.++++|++|+|++|+|+.+++..|.++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 468999999999998888899999999999999999999877 6999999999999999999998889999999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCC-CCChhhcCCCCCCEEEecCCcCCCCCCcccccC-----------
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAG-QLPDFLGNFASLQNLKLSGNNLTGPIPESFKGL----------- 225 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l----------- 225 (959)
++|+++.. .+..+..+++|++|++++|++.+ .+|..|+++++|++|+|++|++++..+..|..+
T Consensus 112 ~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~ 187 (606)
T 3vq2_A 112 VETKLASL----ESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLD 187 (606)
T ss_dssp TTSCCCCS----SSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEE
T ss_pred cCCccccc----cccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceee
Confidence 99999852 33568899999999999999986 679999999999999999999987766544322
Q ss_pred -----------------CcccccccccCC---------------------------------------------------
Q 002149 226 -----------------NLVNLWLNDQKG--------------------------------------------------- 237 (959)
Q Consensus 226 -----------------~l~~L~~~~~~~--------------------------------------------------- 237 (959)
++..|.+..+..
T Consensus 188 l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~ 267 (606)
T 3vq2_A 188 MSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFR 267 (606)
T ss_dssp CTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEE
T ss_pred ccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhhee
Confidence 111222211110
Q ss_pred ----------------------------------------------------CCccc---------------c--ccccc
Q 002149 238 ----------------------------------------------------GGFTG---------------T--IDVLG 248 (959)
Q Consensus 238 ----------------------------------------------------~~l~~---------------~--~~~l~ 248 (959)
..++. . ...+.
T Consensus 268 l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~ 347 (606)
T 3vq2_A 268 LTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKV 347 (606)
T ss_dssp ECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCC
T ss_pred ccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhc
Confidence 00000 0 01244
Q ss_pred CCcCCcEEEccCcccccc--CchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCc-cc-----c
Q 002149 249 NMDQLRTLWLHGNHFSGT--IPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPK-SK-----A 319 (959)
Q Consensus 249 ~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~-~~-----~ 319 (959)
.+++|++|+|++|++++. +|..+..+++|++|+|++|.+++. |..+..+ +|+.|++++|.+++..|. .. .
T Consensus 348 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 426 (606)
T 3vq2_A 348 ALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIM-SANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL 426 (606)
T ss_dssp CCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEE-CCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTC
T ss_pred cCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccc-hhhccCCCCCCeeECCCCccCCccChhhhhccccC
Confidence 677888999999999865 488999999999999999999864 4666666 699999999999987762 21 2
Q ss_pred cccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCc-ccccccCCCCcccEEECCCCcccccCCc
Q 002149 320 YKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKS-WLGLSCGTNSKLTVLNLPNFNLSGTLSP 398 (959)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~L~~L~Ls~N~l~~~~p~ 398 (959)
..+.+++|.+....+.. +..++.+......++.... ..+..++.+++|+.|+|++|++++..|.
T Consensus 427 ~~L~l~~n~l~~~~~~~---------------~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 491 (606)
T 3vq2_A 427 LYLDISYTNTKIDFDGI---------------FLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWG 491 (606)
T ss_dssp CEEECTTSCCEECCTTT---------------TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred CEEECcCCCCCccchhh---------------hcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChh
Confidence 23456666665432221 1112233333333333332 2455677889999999999999999999
Q ss_pred cccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCCC---CC-CcceecccCCCCCCCCC
Q 002149 399 SVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLPK---FS-GAVKLSLDGNPLLNGKS 465 (959)
Q Consensus 399 ~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~---~~-~~~~~~l~~N~~~c~~~ 465 (959)
.++++++|++|+|++|++++.+|..|.++++|+.|||++|+++..++. +. .+..+.+.+|||.|...
T Consensus 492 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 492 VFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp TTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred hhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 999999999999999999999999999999999999999999965443 23 47789999999999864
No 255
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-34 Score=351.83 Aligned_cols=242 Identities=23% Similarity=0.342 Sum_probs=194.9
Q ss_pred hcCCcccCcccccCceEEEEEEEc--CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCce----
Q 002149 610 TKNFASENELGRGGFGVVYKGELD--DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYE---- 683 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 683 (959)
.++|++.+.||+|+||.||+|... +|+.||||++... ........+.+|++++++++||||+++++++.....
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 468999999999999999999875 6899999998754 244556778999999999999999999999987655
Q ss_pred -EEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 684 -RLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 684 -~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
.|+||||+++++|.+++. ..+++.+++.++.||+.||+|||+ ++||||||||+|||++.+ .+||+|||
T Consensus 158 ~~~lv~E~~~g~~L~~~~~-------~~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKG-------QKLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp EEEEEEECCCCEECC-----------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCT
T ss_pred eeEEEEEeCCCCcHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecc
Confidence 699999999999987652 268999999999999999999999 899999999999999986 99999999
Q ss_pred ccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHH
Q 002149 763 LVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEK 842 (959)
Q Consensus 763 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (959)
+++..... ....||+.|+|||++.+.. +.++|||||||++|||++|..||.+.....
T Consensus 227 ~a~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------------- 283 (681)
T 2pzi_A 227 AVSRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG----------------- 283 (681)
T ss_dssp TCEETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS-----------------
T ss_pred cchhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc-----------------
Confidence 99866443 3457999999999987654 889999999999999999988876421100
Q ss_pred HHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCC-HHHHHHHHHHhHh
Q 002149 843 LRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPD-MGHAVNVLAPLVE 894 (959)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~ev~~~L~~~~~ 894 (959)
+............+.+++.+||+.||++||+ ++++.+.+..++.
T Consensus 284 --------~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 284 --------LPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp --------CCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred --------ccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 0000001112246789999999999999995 5566666665543
No 256
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.3e-33 Score=335.83 Aligned_cols=356 Identities=18% Similarity=0.208 Sum_probs=255.9
Q ss_pred cEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEcc
Q 002149 80 RVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALD 158 (959)
Q Consensus 80 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 158 (959)
+++.|+|++|++++..|..+.++++|++|+|++|++++.++ .|.++++|++|+|++|+++.+++..|.++++|++|+|+
T Consensus 27 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 106 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLM 106 (549)
T ss_dssp TCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECT
T ss_pred CccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECC
Confidence 79999999999998889999999999999999999999887 69999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCccccCccccCeecccccccCCCCC-hhhcCCCCCCEEEecCCcCCCCCCcccccC------------
Q 002149 159 SNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLP-DFLGNFASLQNLKLSGNNLTGPIPESFKGL------------ 225 (959)
Q Consensus 159 ~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l------------ 225 (959)
+|+++.. .+|..+..+++|++|++++|++.+.+| ..|.++++|++|++++|++++..|..+..+
T Consensus 107 ~n~l~~~---~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 183 (549)
T 2z81_A 107 GNPYQTL---GVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSE 183 (549)
T ss_dssp TCCCSSS---CSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSB
T ss_pred CCccccc---chhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCc
Confidence 9999853 346678889999999999998554554 678888899999999998888777766543
Q ss_pred -------------CcccccccccCCCCccccc------------------------------------------------
Q 002149 226 -------------NLVNLWLNDQKGGGFTGTI------------------------------------------------ 244 (959)
Q Consensus 226 -------------~l~~L~~~~~~~~~l~~~~------------------------------------------------ 244 (959)
+++.|.+.++....+....
T Consensus 184 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~ 263 (549)
T 2z81_A 184 SAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTL 263 (549)
T ss_dssp STTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEE
T ss_pred ccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccc
Confidence 1222333322222110000
Q ss_pred --------------cc--------------------------ccCCcCCcEEEccCccccccCchhh-cCCCCCCEEeCC
Q 002149 245 --------------DV--------------------------LGNMDQLRTLWLHGNHFSGTIPESF-GKLTSLKDLNLN 283 (959)
Q Consensus 245 --------------~~--------------------------l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls 283 (959)
.. +..+++|+.|++++|+++ .+|..+ ..+++|++|+|+
T Consensus 264 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls 342 (549)
T 2z81_A 264 NGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLS 342 (549)
T ss_dssp ECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECC
T ss_pred cccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEcc
Confidence 00 001234566666666665 455555 468888888888
Q ss_pred CCcCCCCCcc---ccccc-cCCeEeCCCCcCCCCCC--c----c-cccccccccCcccCCCCCCCCchhhHHHHhhccCC
Q 002149 284 SNQFVGLIPP---SLASL-SLDHLDLNNNMFMGPVP--K----S-KAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGL 352 (959)
Q Consensus 284 ~N~l~~~~p~---~~~~~-~L~~L~L~~N~l~~~ip--~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (959)
+|++++.+|. .+..+ +|+.|+|++|++++..+ . . ....+.+++|.+...+....
T Consensus 343 ~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~--------------- 407 (549)
T 2z81_A 343 ENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQ--------------- 407 (549)
T ss_dssp SSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCC---------------
T ss_pred CCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhc---------------
Confidence 8888876543 24444 58888888888865321 0 0 12234566666654332211
Q ss_pred CCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCe
Q 002149 353 NYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTL 432 (959)
Q Consensus 353 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~ 432 (959)
.++.+......++......+ ...++|+.|+|++|+|++.+ ..+++|++|+|++|+|+ .+|. ...+++|++
T Consensus 408 -~~~~L~~L~Ls~N~l~~l~~---~~~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~ 477 (549)
T 2z81_A 408 -WPEKMRFLNLSSTGIRVVKT---CIPQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLV 477 (549)
T ss_dssp -CCTTCCEEECTTSCCSCCCT---TSCTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCE
T ss_pred -ccccccEEECCCCCcccccc---hhcCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCE
Confidence 11222222222222221111 11368999999999999753 57899999999999999 7886 578999999
Q ss_pred EeCCCCccCCCCCC----CCCcceecccCCCCCCCC
Q 002149 433 LDLSQNNLSPPLPK----FSGAVKLSLDGNPLLNGK 464 (959)
Q Consensus 433 L~Ls~N~l~~~~p~----~~~~~~~~l~~N~~~c~~ 464 (959)
|||++|+|++.+|. +..+..+++.+|+|.|..
T Consensus 478 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 478 MKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp EECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred EecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 99999999998885 356778999999999874
No 257
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.5e-34 Score=312.47 Aligned_cols=235 Identities=12% Similarity=0.053 Sum_probs=185.1
Q ss_pred hcCCcccCcccccCceEEEEEEEc-CCcEEEEEEccccccc-HHHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 610 TKNFASENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVIS-KKAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
.++|++.+.||+|+||.||+|... +++.||||++...... ....+.+.+|+.++..++||||+++++++.+.+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 357999999999999999999765 5899999999765433 45567899999999999999999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++++|.+++.. . ....++.+++.|++.||+|||+ ++|+||||||+|||++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~------~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~----- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADT------S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA----- 174 (286)
T ss_dssp EECCCEEEHHHHHTT------C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred EEecCCCCHHHHHhc------C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc-----
Confidence 999999999999832 1 3556788999999999999999 899999999999999999999997443
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhc
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAI 847 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (959)
|++ .++.++|||||||++|||++|+.||.+....+... ..........
T Consensus 175 ----------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~---------~~~~~~~~~~ 222 (286)
T 3uqc_A 175 ----------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA---------PAERDTAGQP 222 (286)
T ss_dssp ----------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE---------ECCBCTTSCB
T ss_pred ----------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH---------HHHHHhccCC
Confidence 333 36889999999999999999999998765322100 0000000000
Q ss_pred CCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhh
Q 002149 848 DPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEK 895 (959)
Q Consensus 848 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 895 (959)
... ..........+.+++.+||+.||++| |+.|+++.|+.+...
T Consensus 223 ~~~---~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 223 IEP---ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp CCH---HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred CCh---hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 000 00001122468899999999999999 999999999887654
No 258
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.6e-33 Score=335.35 Aligned_cols=372 Identities=19% Similarity=0.164 Sum_probs=224.6
Q ss_pred CcceEecC-----------CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCC
Q 002149 71 WKHVFCSN-----------SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNF 138 (959)
Q Consensus 71 w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l 138 (959)
+..+.|.. ..++.|+|++|.+++..|..|.++++|++|+|++|.+.+..| .|.++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 34578864 368899999999998888899999999999999999998877 699999999999999999
Q ss_pred CCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCC
Q 002149 139 DTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPI 218 (959)
Q Consensus 139 ~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 218 (959)
+.+++..|.++++|++|+|++|+++.. .|..+..+++|++|++++|++.+..+..+..+++|++|+|++|++++..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 169 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSI----DFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLS 169 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCG----GGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEEC
T ss_pred cccChhhhcccccccEeeccccCcccC----CcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccC
Confidence 999888899999999999999998853 2455677778888888888877644334444777777777777777666
Q ss_pred CcccccC-Ccc--cccccccCCCCccccc-----------------------------------------------cccc
Q 002149 219 PESFKGL-NLV--NLWLNDQKGGGFTGTI-----------------------------------------------DVLG 248 (959)
Q Consensus 219 p~~~~~l-~l~--~L~~~~~~~~~l~~~~-----------------------------------------------~~l~ 248 (959)
|..|..+ ++. .|.+.++....+.... ..+.
T Consensus 170 ~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~ 249 (606)
T 3t6q_A 170 KEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFE 249 (606)
T ss_dssp HHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGG
T ss_pred hhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhc
Confidence 6555444 222 3333333222111100 0000
Q ss_pred CCc--CCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCcccc-----c
Q 002149 249 NMD--QLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKA-----Y 320 (959)
Q Consensus 249 ~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~-----~ 320 (959)
.+. +|+.|++++|.+++..+..|..+++|++|+|++|+++ .+|..+..+ +|+.|++++|.+++..|.... .
T Consensus 250 ~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 328 (606)
T 3t6q_A 250 GLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLT 328 (606)
T ss_dssp GGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCS
T ss_pred hhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCC
Confidence 010 4455555555555444444555555555555555555 333344443 355555555555543332211 1
Q ss_pred ccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCccc--ccccCCCCcccEEECCCCcccccCCc
Q 002149 321 KYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWL--GLSCGTNSKLTVLNLPNFNLSGTLSP 398 (959)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~L~~L~Ls~N~l~~~~p~ 398 (959)
.+.+++|.+.+..+. +.+..++.+.......+...... ...++.+++|+.|+|++|++.+..|.
T Consensus 329 ~L~l~~n~~~~~~~~--------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 394 (606)
T 3t6q_A 329 HLSIKGNTKRLELGT--------------GCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTE 394 (606)
T ss_dssp EEECCSCSSCCBCCS--------------STTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTT
T ss_pred EEECCCCCcccccch--------------hhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHH
Confidence 112222222110000 00011112222222222222221 23455667777777777777777677
Q ss_pred cccCcCcCCEEeCcccccccccCCC-ccCCCCCCeEeCCCCccCCCCCC----CCCcceecccCCCCC
Q 002149 399 SVGNLDSLTQIKLQSNNISGQIPTN-WTNLKSLTLLDLSQNNLSPPLPK----FSGAVKLSLDGNPLL 461 (959)
Q Consensus 399 ~~~~l~~L~~L~L~~N~l~g~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~----~~~~~~~~l~~N~~~ 461 (959)
.+.++++|++|+|++|++++..|.. +.++++|+.|++++|.+++.+|. +.++..+.+.+|++.
T Consensus 395 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 462 (606)
T 3t6q_A 395 AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFP 462 (606)
T ss_dssp TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCG
T ss_pred HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCC
Confidence 7777777777777777777655543 66777777777777777666553 344566677776553
No 259
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.5e-33 Score=307.51 Aligned_cols=235 Identities=21% Similarity=0.272 Sum_probs=181.4
Q ss_pred hcCCccc-CcccccCceEEEEEEE-cCCcEEEEEEcccccccHHHHHHHHHHHHHH-HhcCCCCceeEEEEEEe----Cc
Q 002149 610 TKNFASE-NELGRGGFGVVYKGEL-DDGTKIAVKRMEAGVISKKAVDEFHSEIAVL-SKVRHRHLVSLLGYSVA----GY 682 (959)
Q Consensus 610 ~~~~~~~-~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~ 682 (959)
.++|.+. +.||+|+||.||+|.. .+++.||||++... ..+.+|++++ +..+||||+++++++.. ..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 4567776 7899999999999976 57899999998642 3466888888 55589999999999887 67
Q ss_pred eEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---CCcEEEe
Q 002149 683 ERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD---DFRAKVS 759 (959)
Q Consensus 683 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~---~~~~ki~ 759 (959)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred eEEEEEeecCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEe
Confidence 789999999999999999652 23569999999999999999999999 89999999999999998 7889999
Q ss_pred eccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHhhhcc
Q 002149 760 DFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDESRPEERQYLAAWFWNIKSD 839 (959)
Q Consensus 760 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 839 (959)
|||+++... +..++.++|||||||++|||++|+.||.........
T Consensus 163 Dfg~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~------------ 207 (299)
T 3m2w_A 163 DFGFAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------------ 207 (299)
T ss_dssp CCTTCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------------
T ss_pred ccccccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh------------
Confidence 999986432 234678999999999999999999999765432110
Q ss_pred hHHHHHhcCCcccCCCCC----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhHhhcC
Q 002149 840 KEKLRAAIDPILEVNDDT----FETFWTIAELAGHCTSREPSQRPDMGHAVNVLAPLVEKWK 897 (959)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 897 (959)
......+.. ...... ......+.+++.+||+.||++||++.|+++ ++++....
T Consensus 208 -~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~--hp~~~~~~ 264 (299)
T 3m2w_A 208 -PGMKTRIRM--GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN--HPWIMQST 264 (299)
T ss_dssp -CCSCCSSCT--TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SHHHHTGG
T ss_pred -HHHHHHHhh--ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc--Chhhcccc
Confidence 000000000 000001 012346889999999999999999999987 56665443
No 260
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-34 Score=327.39 Aligned_cols=245 Identities=16% Similarity=0.150 Sum_probs=182.0
Q ss_pred cCCcccCcccccCceEEEEEEE-cCCcEEEEEEccccc-ccHHHHHHHHHHHHHHHhcCC-CCce---------e-----
Q 002149 611 KNFASENELGRGGFGVVYKGEL-DDGTKIAVKRMEAGV-ISKKAVDEFHSEIAVLSKVRH-RHLV---------S----- 673 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h-~niv---------~----- 673 (959)
.+|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++| +|.. .
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4577788999999999999974 579999999987332 122335778999999999977 2211 1
Q ss_pred -------EEEEEEe-----CceEEEEEEecCCCchhhHHhhcc--cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 002149 674 -------LLGYSVA-----GYERLLVYEYMPQGALSKHIFHWK--SLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFI 739 (959)
Q Consensus 674 -------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 739 (959)
+..++.. ....+++|+++ +++|.+++.... ......+++..++.++.||++||+|||+ ++||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcc
Confidence 1111111 12356777776 899998885321 1223568899999999999999999999 8999
Q ss_pred ecCCCCCCEEECCCCcEEEeeccccccCCCCCcceeecccccccccccccc----------ccCCCCccchHHHHHHHHH
Q 002149 740 HRDLKSSNILLGDDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYA----------VTGKITTKVDVFSFGVVLM 809 (959)
Q Consensus 740 H~Dik~~NiLl~~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwSlG~ll~ 809 (959)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999865432 344577 999999999 5566888999999999999
Q ss_pred HHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCCcccCCCCCHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 002149 810 ELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDPILEVNDDTFETFWTIAELAGHCTSREPSQRPDMGHAVN 887 (959)
Q Consensus 810 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 887 (959)
||++|+.||......+. ....+.... .....+.+++.+||+.||++||++.++++
T Consensus 309 elltg~~Pf~~~~~~~~----------------~~~~~~~~~-------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGG----------------SEWIFRSCK-------NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHSSCCCCTTGGGSC----------------SGGGGSSCC-------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHCCCCCCCcchhhh----------------HHHHHhhcc-------cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999999976543211 111111111 11246889999999999999999888765
No 261
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8.3e-33 Score=335.14 Aligned_cols=366 Identities=21% Similarity=0.194 Sum_probs=258.3
Q ss_pred cEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEcc
Q 002149 80 RVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALD 158 (959)
Q Consensus 80 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 158 (959)
.++.|+|++|+|++..+..|.++++|++|+|++|+|+++++ .|.++++|++|+|++|+|+.+++.+|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 68999999999997777889999999999999999999888 69999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCccccCccccCeecccccccCC-CCChhhcCCCCCCEEEecCCcCCCCCCcccccCC-----------
Q 002149 159 SNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAG-QLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLN----------- 226 (959)
Q Consensus 159 ~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~----------- 226 (959)
+|+|+++ .+..++++++|++|++++|++.+ .+|..++.+++|++|+|++|++++..+..|..+.
T Consensus 133 ~N~l~~l----~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~l 208 (635)
T 4g8a_A 133 ETNLASL----ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 208 (635)
T ss_dssp TSCCCCS----TTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred CCcCCCC----ChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhc
Confidence 9999853 23458999999999999999986 4688999999999999999999877666553320
Q ss_pred -----------------cccccccccCC------------------------------------CCc-------------
Q 002149 227 -----------------LVNLWLNDQKG------------------------------------GGF------------- 240 (959)
Q Consensus 227 -----------------l~~L~~~~~~~------------------------------------~~l------------- 240 (959)
+..+.+..+.. ..+
T Consensus 209 s~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~ 288 (635)
T 4g8a_A 209 SLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 288 (635)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEE
T ss_pred ccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhh
Confidence 00000000000 000
Q ss_pred -------cc----------------------ccccccCCcCCcEEEccCccccccCch-------------------hhc
Q 002149 241 -------TG----------------------TIDVLGNMDQLRTLWLHGNHFSGTIPE-------------------SFG 272 (959)
Q Consensus 241 -------~~----------------------~~~~l~~l~~L~~L~L~~N~l~~~~p~-------------------~~~ 272 (959)
.+ ....+....+|+.|++.+|.+.+..+. ...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~ 368 (635)
T 4g8a_A 289 AYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV 368 (635)
T ss_dssp ECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCC
T ss_pred hhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccc
Confidence 00 001122334566777777666533221 223
Q ss_pred CCCCCCEEeCCCCcCCCC--Ccccccc-ccCCeEeCCCCcCCCC-----------------------CCccc------cc
Q 002149 273 KLTSLKDLNLNSNQFVGL--IPPSLAS-LSLDHLDLNNNMFMGP-----------------------VPKSK------AY 320 (959)
Q Consensus 273 ~l~~L~~L~Ls~N~l~~~--~p~~~~~-~~L~~L~L~~N~l~~~-----------------------ip~~~------~~ 320 (959)
.+++|+.|++++|.+... .+..+.. .+|+.|+++.|.+.+. .+... ..
T Consensus 369 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~ 448 (635)
T 4g8a_A 369 DLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 448 (635)
T ss_dssp BCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCC
T ss_pred cccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccc
Confidence 567788888888887533 2222222 2466666665554432 21110 00
Q ss_pred ccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCC-CCCCCcccccccCCCCcccEEECCCCcccccCCcc
Q 002149 321 KYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSG-NDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPS 399 (959)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~ 399 (959)
.+.++.|.+....... ....+.+...... +.....+.+..++.+++|+.|+|++|+|++..|..
T Consensus 449 ~l~ls~n~l~~~~~~~---------------~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~ 513 (635)
T 4g8a_A 449 YLDISHTHTRVAFNGI---------------FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 513 (635)
T ss_dssp EEECTTSCCEECCTTT---------------TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred cccccccccccccccc---------------cccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHH
Confidence 0112222222211111 1111222222222 22223345556788899999999999999999999
Q ss_pred ccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCCCC-----CCcceecccCCCCCCCC
Q 002149 400 VGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLPKF-----SGAVKLSLDGNPLLNGK 464 (959)
Q Consensus 400 ~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-----~~~~~~~l~~N~~~c~~ 464 (959)
|+++++|++|+|++|+|++..|..|.++++|++|||++|+|++.+|.. ..+..+.+.+|||.|.+
T Consensus 514 f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 514 FNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp TTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred HcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 999999999999999999888889999999999999999999988852 35678999999999985
No 262
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.7e-33 Score=328.84 Aligned_cols=341 Identities=20% Similarity=0.171 Sum_probs=222.1
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.|+|++|.+++..|..|.++++|++|+|++|+|++..| .|.++++|++|+|++|+|+.+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC---PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC---CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc---ccccCCEEEC
Confidence 467788888888887777788888888888888888888766 588888888888888888887765 7888888888
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCC--CEEEecCCcC--CCCCCcccccCCccccccc
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASL--QNLKLSGNNL--TGPIPESFKGLNLVNLWLN 233 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~l~~L~~~ 233 (959)
++|+++.. .+|..+.++++|++|++++|++.+. .+..+++| +.|+|++|++ ++..|..+..+....+.+
T Consensus 129 s~N~l~~l---~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l- 201 (562)
T 3a79_B 129 SFNDFDVL---PVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHL- 201 (562)
T ss_dssp CSSCCSBC---CCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEE-
T ss_pred CCCCcccc---CchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEE-
Confidence 88888743 2456788888888888888888763 34444444 8888888888 777777766543111111
Q ss_pred ccCCCCccccc------------------------------ccc---------------------------cCCcCCcEE
Q 002149 234 DQKGGGFTGTI------------------------------DVL---------------------------GNMDQLRTL 256 (959)
Q Consensus 234 ~~~~~~l~~~~------------------------------~~l---------------------------~~l~~L~~L 256 (959)
+...+.+.+.. +.+ ...++|++|
T Consensus 202 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L 281 (562)
T 3a79_B 202 VFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYL 281 (562)
T ss_dssp EECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEE
T ss_pred EecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEE
Confidence 00000000000 000 011266677
Q ss_pred EccCccccccCchhh-----------------------------------------------------cCCCCCCEEeCC
Q 002149 257 WLHGNHFSGTIPESF-----------------------------------------------------GKLTSLKDLNLN 283 (959)
Q Consensus 257 ~L~~N~l~~~~p~~~-----------------------------------------------------~~l~~L~~L~Ls 283 (959)
++++|+++|.+|..+ ..+++|++|+|+
T Consensus 282 ~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~ 361 (562)
T 3a79_B 282 NIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFT 361 (562)
T ss_dssp EEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECC
T ss_pred EEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECC
Confidence 777777776666554 334445555555
Q ss_pred CCcCCCCCccccccc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCccccccc
Q 002149 284 SNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSW 362 (959)
Q Consensus 284 ~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 362 (959)
+|++++.+|..+..+ +|+.|+|++|++++..+ +...+ ..++.+....
T Consensus 362 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-----------------------------~~~~~---~~l~~L~~L~ 409 (562)
T 3a79_B 362 QNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFK-----------------------------VALMT---KNMSSLETLD 409 (562)
T ss_dssp SSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTH-----------------------------HHHTT---TTCTTCCEEE
T ss_pred CCccccchhhhhcccCCCCEEECCCCCcCCccc-----------------------------chhhh---cCCCCCCEEE
Confidence 555554444444444 35555555554443100 00000 1111222222
Q ss_pred CCCCCCCc-ccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccC
Q 002149 363 SGNDPCKS-WLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLS 441 (959)
Q Consensus 363 ~~~~~~~~-~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~ 441 (959)
...+.... .....+..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|+
T Consensus 410 l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 486 (562)
T 3a79_B 410 VSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK 486 (562)
T ss_dssp CTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC
T ss_pred CCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC
Confidence 22222222 2222355678999999999999988887665 79999999999999 78988889999999999999999
Q ss_pred CCCCC----CCCcceecccCCCCCCCC
Q 002149 442 PPLPK----FSGAVKLSLDGNPLLNGK 464 (959)
Q Consensus 442 ~~~p~----~~~~~~~~l~~N~~~c~~ 464 (959)
..++. +.++..+.+.+|||.|..
T Consensus 487 ~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 487 SVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp CCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred CCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 65543 345678899999999974
No 263
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.9e-33 Score=333.82 Aligned_cols=296 Identities=22% Similarity=0.238 Sum_probs=215.6
Q ss_pred CccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCE
Q 002149 127 NLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQN 206 (959)
Q Consensus 127 ~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~ 206 (959)
+|++|+|++|+++.+++..|.++++|++|+|++|+++ .+|..+..+++|++|++++|++.+..|..+..+++|++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-----~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 329 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-----ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTH 329 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-----CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSE
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-----CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCE
Confidence 4666666777777777777777778888888887776 56777777778888888888877777777777788888
Q ss_pred EEecCCcCCCCCCcc-cccC-CcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCC
Q 002149 207 LKLSGNNLTGPIPES-FKGL-NLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNS 284 (959)
Q Consensus 207 L~Ls~N~l~~~~p~~-~~~l-~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 284 (959)
|++++|.+.+.+|.. +..+ +++.|.+.++...........+.++++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 330 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 409 (606)
T 3t6q_A 330 LSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAF 409 (606)
T ss_dssp EECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTT
T ss_pred EECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCC
Confidence 888888777655543 5544 45566665555444432234567777777788877777777777777777778888877
Q ss_pred CcCCCCCccc-cccc-cCCeEeCCCCcCCCCCCcccc-----cccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcc
Q 002149 285 NQFVGLIPPS-LASL-SLDHLDLNNNMFMGPVPKSKA-----YKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPR 357 (959)
Q Consensus 285 N~l~~~~p~~-~~~~-~L~~L~L~~N~l~~~ip~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (959)
|++++..+.. +..+ +|+.|+|++|.+++..|.... ..+.+++|.+.+..
T Consensus 410 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~------------------------ 465 (606)
T 3t6q_A 410 TRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGN------------------------ 465 (606)
T ss_dssp CCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGE------------------------
T ss_pred CcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccc------------------------
Confidence 7777665433 5555 477777777777766554321 11122232221100
Q ss_pred cccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCC
Q 002149 358 LVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQ 437 (959)
Q Consensus 358 l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~ 437 (959)
......++.+++|+.|+|++|++++..|..|+++++|++|+|++|++++.+|..+.+++.| .|+|++
T Consensus 466 ------------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~ 532 (606)
T 3t6q_A 466 ------------IQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLAS 532 (606)
T ss_dssp ------------ECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCS
T ss_pred ------------cccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcC
Confidence 0011235567999999999999999999999999999999999999999999999999999 999999
Q ss_pred CccCCCCCC----CCCcceecccCCCCCCCC
Q 002149 438 NNLSPPLPK----FSGAVKLSLDGNPLLNGK 464 (959)
Q Consensus 438 N~l~~~~p~----~~~~~~~~l~~N~~~c~~ 464 (959)
|++++.+|. +..+..+.+.+|||.|..
T Consensus 533 N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 533 NHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp SCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred CcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 999998875 356788999999999974
No 264
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=329.31 Aligned_cols=366 Identities=19% Similarity=0.205 Sum_probs=250.2
Q ss_pred cEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEcc
Q 002149 80 RVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALD 158 (959)
Q Consensus 80 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 158 (959)
+++.|+++++++++..+..|.++++|++|+|++|++++.++ .|.++++|++|+|++|+++.+++..|.++++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 68888999999887777788899999999999998888777 58888999999999999988888888889999999999
Q ss_pred CcccCCCCCCCCCccccCccccCeecccccccCC-CCChhhcCCCCCCEEEecCCcCCCCCCcccccC-Cc----ccccc
Q 002149 159 SNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAG-QLPDFLGNFASLQNLKLSGNNLTGPIPESFKGL-NL----VNLWL 232 (959)
Q Consensus 159 ~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l----~~L~~ 232 (959)
+|+++... +..+..+++|++|++++|++.+ .+|..|+++++|++|++++|++++..+..+..+ ++ ..+.+
T Consensus 109 ~n~l~~l~----~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l 184 (570)
T 2z63_A 109 ETNLASLE----NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184 (570)
T ss_dssp TSCCCCST----TCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred ccccccCC----CccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhccc
Confidence 99887532 1247788888888888888886 468888888888888888888876655544332 11 11111
Q ss_pred cccCCCC-------------------------------------------------------------------------
Q 002149 233 NDQKGGG------------------------------------------------------------------------- 239 (959)
Q Consensus 233 ~~~~~~~------------------------------------------------------------------------- 239 (959)
..+....
T Consensus 185 ~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 185 SLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred CCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 1111000
Q ss_pred -----ccc-ccccccCCcCCcEEEccCccccccCchhh------------------------------------------
Q 002149 240 -----FTG-TIDVLGNMDQLRTLWLHGNHFSGTIPESF------------------------------------------ 271 (959)
Q Consensus 240 -----l~~-~~~~l~~l~~L~~L~L~~N~l~~~~p~~~------------------------------------------ 271 (959)
+.+ ..+.+..+++|++|++++|.++ .+|..+
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~ 343 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE 343 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccc
Confidence 000 0012333444444444444443 222221
Q ss_pred cCCCCCCEEeCCCCcCCCCC--ccccccc-cCCeEeCCCCcCCCCCCcc----cccccccccCcccCCCCCCCCchhhHH
Q 002149 272 GKLTSLKDLNLNSNQFVGLI--PPSLASL-SLDHLDLNNNMFMGPVPKS----KAYKYSYSSNAFCQPTEGVPCAPEVMA 344 (959)
Q Consensus 272 ~~l~~L~~L~Ls~N~l~~~~--p~~~~~~-~L~~L~L~~N~l~~~ip~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (959)
..+++|++|+|++|++++.. +..+..+ +|+.|+|++|.+++..+.. ....+.+++|.+.......
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-------- 415 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFS-------- 415 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSC--------
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchh--------
Confidence 35667777777777777553 4445554 5777777777776533220 1122334444443321100
Q ss_pred HHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCccc-ccCCccccCcCcCCEEeCcccccccccCCC
Q 002149 345 LIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLS-GTLSPSVGNLDSLTQIKLQSNNISGQIPTN 423 (959)
Q Consensus 345 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 423 (959)
.+..++.+.......+.........++.+++|+.|+|++|++. +.+|..+..+++|++|+|++|++++..|..
T Consensus 416 ------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~ 489 (570)
T 2z63_A 416 ------VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489 (570)
T ss_dssp ------TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred ------hhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhh
Confidence 0111222333233333333334445677899999999999998 679999999999999999999999988999
Q ss_pred ccCCCCCCeEeCCCCccCCCCCC----CCCcceecccCCCCCCCC
Q 002149 424 WTNLKSLTLLDLSQNNLSPPLPK----FSGAVKLSLDGNPLLNGK 464 (959)
Q Consensus 424 l~~l~~L~~L~Ls~N~l~~~~p~----~~~~~~~~l~~N~~~c~~ 464 (959)
|.++++|+.|+|++|++++.+|. +..+..+.+.+|++.|..
T Consensus 490 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 490 FNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred hhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 99999999999999999988774 355678999999999874
No 265
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=325.35 Aligned_cols=359 Identities=20% Similarity=0.196 Sum_probs=250.4
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.|+|++|.+++..|..|.++++|++|+|++|+|++..| .|.++++|++|+|++|+|+.+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH---PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC---CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc---ccCCccEEec
Confidence 578899999999998878889999999999999999998876 689999999999999999988876 7899999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCC--CEEEecCCcC--CCCCCcccccCCc------
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASL--QNLKLSGNNL--TGPIPESFKGLNL------ 227 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~l------ 227 (959)
++|++++. .+|..++.+++|++|++++|++.+ ..+..+++| +.|+|++|++ .+..|..+..+..
T Consensus 98 ~~N~l~~~---~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~ 171 (520)
T 2z7x_B 98 SFNAFDAL---PICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIV 171 (520)
T ss_dssp CSSCCSSC---CCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEE
T ss_pred cCCccccc---cchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEE
Confidence 99998753 367888999999999999999886 456777777 9999999999 7777877766431
Q ss_pred ------------------ccccccccCCCC-------cccccccccC---------------------------CcCCcE
Q 002149 228 ------------------VNLWLNDQKGGG-------FTGTIDVLGN---------------------------MDQLRT 255 (959)
Q Consensus 228 ------------------~~L~~~~~~~~~-------l~~~~~~l~~---------------------------l~~L~~ 255 (959)
..|...+...+. +.+.++.+.. +++|++
T Consensus 172 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~ 251 (520)
T 2z7x_B 172 FPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWY 251 (520)
T ss_dssp CCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSE
T ss_pred eccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccE
Confidence 111111111110 1111111111 236777
Q ss_pred EEccCccccccCchhh-----cCCCCCCEEeCCCCcCCCCCc-cc-------------------------cccc-cCCeE
Q 002149 256 LWLHGNHFSGTIPESF-----GKLTSLKDLNLNSNQFVGLIP-PS-------------------------LASL-SLDHL 303 (959)
Q Consensus 256 L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~-------------------------~~~~-~L~~L 303 (959)
|+|++|+++|.+|..+ ..+++|+.+++++|.+ .+| .. +..+ +|+.|
T Consensus 252 L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L 329 (520)
T 2z7x_B 252 FSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHL 329 (520)
T ss_dssp EEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEE
T ss_pred EEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEE
Confidence 7777777777777766 5555555555544444 111 00 0233 47778
Q ss_pred eCCCCcCCCCCCcccc-----cccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCc-ccccccC
Q 002149 304 DLNNNMFMGPVPKSKA-----YKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKS-WLGLSCG 377 (959)
Q Consensus 304 ~L~~N~l~~~ip~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~ 377 (959)
+|++|++++.+|.... ..+.+++|.+... ..+...++.+ +.+.......+.... .....+.
T Consensus 330 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l----------~~~~~~~~~l---~~L~~L~Ls~N~l~~~l~~~~~~ 396 (520)
T 2z7x_B 330 DFSNNLLTDTVFENCGHLTELETLILQMNQLKEL----------SKIAEMTTQM---KSLQQLDISQNSVSYDEKKGDCS 396 (520)
T ss_dssp ECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBH----------HHHHHHHTTC---TTCCEEECCSSCCBCCGGGCSCC
T ss_pred EeECCccChhhhhhhccCCCCCEEEccCCccCcc----------ccchHHHhhC---CCCCEEECCCCcCCcccccchhc
Confidence 8888887776665432 2234445544321 1111122222 233333333344333 3333466
Q ss_pred CCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCCC----CCCccee
Q 002149 378 TNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLPK----FSGAVKL 453 (959)
Q Consensus 378 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~~~~ 453 (959)
.+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+..++. +.++..+
T Consensus 397 ~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 473 (520)
T 2z7x_B 397 WTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKI 473 (520)
T ss_dssp CCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEE
Confidence 789999999999999988887765 79999999999999 8999888999999999999999965443 3457789
Q ss_pred cccCCCCCCCC
Q 002149 454 SLDGNPLLNGK 464 (959)
Q Consensus 454 ~l~~N~~~c~~ 464 (959)
.+.+|++.|..
T Consensus 474 ~l~~N~~~c~c 484 (520)
T 2z7x_B 474 WLHTNPWDCSC 484 (520)
T ss_dssp ECCSSCBCCCH
T ss_pred ECcCCCCcccC
Confidence 99999999874
No 266
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.4e-34 Score=319.52 Aligned_cols=244 Identities=16% Similarity=0.159 Sum_probs=185.0
Q ss_pred hcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccc------cHHHHHHHHHHHHHHHhcC---------CCCceeE
Q 002149 610 TKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVI------SKKAVDEFHSEIAVLSKVR---------HRHLVSL 674 (959)
Q Consensus 610 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~---------h~niv~l 674 (959)
.++|++.+.||+|+||.||+|+. +|+.||||++..... .....+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35788999999999999999987 689999999976532 2233467889999999986 8888888
Q ss_pred EEEEE------------------------------eCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHH
Q 002149 675 LGYSV------------------------------AGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVA 724 (959)
Q Consensus 675 ~~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia 724 (959)
.+++. .....++||||+++|++.+.+.. ..+++..+..++.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHH
Confidence 87653 26789999999999987666632 5689999999999999
Q ss_pred HHHHHHH-hcCCCCeEecCCCCCCEEECCCC--------------------cEEEeeccccccCCCCCcceeeccccccc
Q 002149 725 RGMEYLH-SLAHQSFIHRDLKSSNILLGDDF--------------------RAKVSDFGLVKLAPDSERSVVTRLAGTFG 783 (959)
Q Consensus 725 ~gL~yLH-~~~~~~ivH~Dik~~NiLl~~~~--------------------~~ki~DfGla~~~~~~~~~~~~~~~gt~~ 783 (959)
.||+||| + ++||||||||+|||++.++ .+||+|||+|+..... ...||+.
T Consensus 172 ~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 8 7999999999999999887 8999999999865432 2479999
Q ss_pred cccccccccCCCCccchHHHHHHH-HHHHHhCCCCCCCCChHHHHHHHHHHHhhhcchHHHHHhcCCc-ccCCCCCHHHH
Q 002149 784 YLAPEYAVTGKITTKVDVFSFGVV-LMELLTGLMALDESRPEERQYLAAWFWNIKSDKEKLRAAIDPI-LEVNDDTFETF 861 (959)
Q Consensus 784 y~aPE~~~~~~~~~~~DvwSlG~l-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 861 (959)
|+|||++.+.. +.++||||+|++ .+++++|..||..... ..... ..+....... ...........
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~--~~~~~----------~~~~~~~~~~~~~~~~~~~~~s 309 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW--LHYLT----------DKMLKQMTFKTKCNTPAMKQIK 309 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH--HHHHH----------HHHHHTCCCSSCCCSHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh--hhHHH----------HhhhhhhccCcccchhhhhhcC
Confidence 99999998766 889999998777 7788889888742100 00010 1111111100 00011122345
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHH-H
Q 002149 862 WTIAELAGHCTSREPSQRPDMGHAV-N 887 (959)
Q Consensus 862 ~~l~~l~~~cl~~dP~~RPt~~ev~-~ 887 (959)
..+.+|+.+||+.| |+.|++ +
T Consensus 310 ~~~~dli~~~L~~d-----sa~e~l~~ 331 (336)
T 2vuw_A 310 RKIQEFHRTMLNFS-----SATDLLCQ 331 (336)
T ss_dssp HHHHHHHHHGGGSS-----SHHHHHHH
T ss_pred HHHHHHHHHHhccC-----CHHHHHhc
Confidence 67899999999977 888887 5
No 267
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.2e-33 Score=304.21 Aligned_cols=250 Identities=29% Similarity=0.471 Sum_probs=204.3
Q ss_pred ccEEecCCCCCCC--CChhhhcCCCCCcEEEccC-cccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCC
Q 002149 128 LKYAYLDGNNFDT--IPADFFDGLENLQVLALDS-NNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASL 204 (959)
Q Consensus 128 L~~L~L~~N~l~~--i~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L 204 (959)
++.|+|++|++++ ..+..|.++++|++|+|++ |.+.+ .+|..+..+++|++|++++|++++.+|..|..+++|
T Consensus 52 l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~----~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 127 (313)
T 1ogq_A 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG----PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEES----CCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTC
T ss_pred EEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccc----cCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCC
Confidence 4444444444443 2223355555555555552 55544 355555666666666666666667788899999999
Q ss_pred CEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCC-CCCEEeCC
Q 002149 205 QNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLT-SLKDLNLN 283 (959)
Q Consensus 205 ~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls 283 (959)
++|+|++|++++.+|.. +.++++|++|+|++|++++.+|..+..++ +|++|+|+
T Consensus 128 ~~L~Ls~N~l~~~~p~~-------------------------~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~ 182 (313)
T 1ogq_A 128 VTLDFSYNALSGTLPPS-------------------------ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS 182 (313)
T ss_dssp CEEECCSSEEESCCCGG-------------------------GGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECC
T ss_pred CEEeCCCCccCCcCChH-------------------------HhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECc
Confidence 99999999999988877 45679999999999999999999999998 99999999
Q ss_pred CCcCCCCCccccccccCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccC
Q 002149 284 SNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWS 363 (959)
Q Consensus 284 ~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 363 (959)
+|++++.+|..+..++|+.|+|++|.+++.+|.
T Consensus 183 ~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~----------------------------------------------- 215 (313)
T 1ogq_A 183 RNRLTGKIPPTFANLNLAFVDLSRNMLEGDASV----------------------------------------------- 215 (313)
T ss_dssp SSEEEEECCGGGGGCCCSEEECCSSEEEECCGG-----------------------------------------------
T ss_pred CCeeeccCChHHhCCcccEEECcCCcccCcCCH-----------------------------------------------
Confidence 999999999999999999999999999876553
Q ss_pred CCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCC
Q 002149 364 GNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPP 443 (959)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~ 443 (959)
.++.+++|+.|+|++|++++.+|. +..+++|++|+|++|+|++.+|..|..+++|+.|+|++|+++|.
T Consensus 216 -----------~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 283 (313)
T 1ogq_A 216 -----------LFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283 (313)
T ss_dssp -----------GCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred -----------HHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccccc
Confidence 234568999999999999988776 88999999999999999999999999999999999999999999
Q ss_pred CCCC---CCcceecccCCCCCCCCC
Q 002149 444 LPKF---SGAVKLSLDGNPLLNGKS 465 (959)
Q Consensus 444 ~p~~---~~~~~~~l~~N~~~c~~~ 465 (959)
+|.. ..+..+.+.+|+++||.+
T Consensus 284 ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 284 IPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp CCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred CCCCccccccChHHhcCCCCccCCC
Confidence 9975 445678999999999964
No 268
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.6e-32 Score=324.82 Aligned_cols=307 Identities=20% Similarity=0.209 Sum_probs=253.0
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.+++.++.+++..+..+..+++|++|+|++|.|++.++ .|.++++|++|+|++|.|+.+++..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 356788999999986656668999999999999999999888 7999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCcc-ccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccC
Q 002149 158 DSNNFNASKGWSFPKG-LQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQK 236 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~-l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~ 236 (959)
++|.|+. +|.. +..+++|+.|+|++|++++..|..|..+++|+.|+|++|.+++.....+. ++..|.+..+.
T Consensus 131 ~~n~l~~-----l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~--~L~~L~l~~n~ 203 (597)
T 3oja_B 131 ERNDLSS-----LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIP--SLFHANVSYNL 203 (597)
T ss_dssp CSSCCCC-----CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCT--TCSEEECCSSC
T ss_pred eCCCCCC-----CCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhh--hhhhhhcccCc
Confidence 9999984 5555 58999999999999999999999999999999999999999976555443 34444444433
Q ss_pred CCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCC
Q 002149 237 GGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVP 315 (959)
Q Consensus 237 ~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip 315 (959)
.. + +...++|+.|++++|.++. +|..+ .++|+.|+|++|.+++. ..+..+ +|+.|+|++|.+++.+|
T Consensus 204 l~---~----l~~~~~L~~L~ls~n~l~~-~~~~~--~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~ 271 (597)
T 3oja_B 204 LS---T----LAIPIAVEELDASHNSINV-VRGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMY 271 (597)
T ss_dssp CS---E----EECCTTCSEEECCSSCCCE-EECSC--CSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEES
T ss_pred cc---c----ccCCchhheeeccCCcccc-ccccc--CCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCH
Confidence 22 2 3445789999999999884 44333 36899999999999874 455555 69999999999887655
Q ss_pred cccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCccccc
Q 002149 316 KSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGT 395 (959)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 395 (959)
. .++.+++|+.|+|++|++++
T Consensus 272 ~----------------------------------------------------------~~~~l~~L~~L~Ls~N~l~~- 292 (597)
T 3oja_B 272 H----------------------------------------------------------PFVKMQRLERLYISNNRLVA- 292 (597)
T ss_dssp G----------------------------------------------------------GGTTCSSCCEEECTTSCCCE-
T ss_pred H----------------------------------------------------------HhcCccCCCEEECCCCCCCC-
Confidence 3 23456889999999999986
Q ss_pred CCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCC-CCCCcceecccCCCCCCCC
Q 002149 396 LSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLP-KFSGAVKLSLDGNPLLNGK 464 (959)
Q Consensus 396 ~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~~~l~~N~~~c~~ 464 (959)
+|..+..+++|+.|+|++|.|+ .+|..+..+++|+.|+|++|+|++..+ .+..+..+.+.+|+|.|..
T Consensus 293 l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 293 LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHH
T ss_pred CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCCChh
Confidence 5777788999999999999999 688888999999999999999987543 3667888999999998864
No 269
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.6e-31 Score=326.34 Aligned_cols=377 Identities=19% Similarity=0.172 Sum_probs=218.0
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.|+|+++++++..+..|.++++|++|+|++|.+++..| .|.++++|++|+|++|+|+.+++..|.++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 368889999999987777788899999999999999988877 4788899999999999999888888888999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccC---Ccccccccc
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGL---NLVNLWLND 234 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~l~~L~~~~ 234 (959)
++|++++ ..|..+..+++|++|++++|++++..|..+.++++|++|+|++|++++..+..+..+ +++.|.+..
T Consensus 105 ~~n~l~~----~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~ 180 (680)
T 1ziw_A 105 MSNSIQK----IKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSS 180 (680)
T ss_dssp CSSCCCC----CCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTT
T ss_pred CCCccCc----cChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCC
Confidence 9998874 234567888888888888888888888888888888888888888887666554332 344454444
Q ss_pred cCCCCcccc------------------------------------------------c-ccccCCc--CCcEEEccCccc
Q 002149 235 QKGGGFTGT------------------------------------------------I-DVLGNMD--QLRTLWLHGNHF 263 (959)
Q Consensus 235 ~~~~~l~~~------------------------------------------------~-~~l~~l~--~L~~L~L~~N~l 263 (959)
+....+... . ..+.+++ +|++|+|++|++
T Consensus 181 n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l 260 (680)
T 1ziw_A 181 NQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNL 260 (680)
T ss_dssp CCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCC
T ss_pred CcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCc
Confidence 433222110 0 1222232 255566666655
Q ss_pred cccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCC-----CCc----c-----cccccccccCc
Q 002149 264 SGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGP-----VPK----S-----KAYKYSYSSNA 328 (959)
Q Consensus 264 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~-----ip~----~-----~~~~~~~~~~~ 328 (959)
++..|..|..+++|++|+|++|++++.+|..+..+ +|+.|++++|...+. +|. . ....+.+++|.
T Consensus 261 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~ 340 (680)
T 1ziw_A 261 NVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDND 340 (680)
T ss_dssp CEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCC
T ss_pred CccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCc
Confidence 55555555555666666666665555555444443 244444444433321 111 0 01112333444
Q ss_pred ccCCCCCCCCc-hhhHHHHhhccC---CCC----------CcccccccCCCCCCCcccccccCCCCcccEEECCCCcccc
Q 002149 329 FCQPTEGVPCA-PEVMALIDFLGG---LNY----------PPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSG 394 (959)
Q Consensus 329 ~~~~~~~~~~~-~~~~~~~~~~~~---~~~----------~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~ 394 (959)
+.+........ ..+.. ++.-.. ... .+.+......++.........++.+++|+.|+|++|++.+
T Consensus 341 l~~~~~~~~~~l~~L~~-L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 419 (680)
T 1ziw_A 341 IPGIKSNMFTGLINLKY-LSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQ 419 (680)
T ss_dssp BCCCCTTTTTTCTTCCE-EECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEE
T ss_pred cCCCChhHhccccCCcE-EECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCcc
Confidence 43322211000 00000 000000 000 0011111122222223333445556667777777777666
Q ss_pred cCC-ccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccC--CCCCC----CCCcceecccCCCC
Q 002149 395 TLS-PSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLS--PPLPK----FSGAVKLSLDGNPL 460 (959)
Q Consensus 395 ~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~----~~~~~~~~l~~N~~ 460 (959)
.+| ..+.++++|++|+|++|++++..+..|..+++|+.|++++|.++ +.+|. +.++..+++.+|.+
T Consensus 420 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l 492 (680)
T 1ziw_A 420 ELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNI 492 (680)
T ss_dssp ECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCC
T ss_pred ccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCC
Confidence 554 45666666666666666666555555555555555555555443 22232 23344555555543
No 270
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.6e-32 Score=307.72 Aligned_cols=307 Identities=21% Similarity=0.208 Sum_probs=250.4
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.+++.++.++...+..+..+++|++|+|++|.+++.++ .|.++++|++|+|++|+++.+++..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 467889999999885544557999999999999999998887 7999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCcc-ccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccC
Q 002149 158 DSNNFNASKGWSFPKG-LQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQK 236 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~-l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~ 236 (959)
++|+++ .+|.. +..+++|++|++++|++.+..+..|..+++|++|++++|++++.....+. ++..|.+..+.
T Consensus 125 ~~n~l~-----~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~L~~L~l~~n~ 197 (390)
T 3o6n_A 125 ERNDLS-----SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIP--SLFHANVSYNL 197 (390)
T ss_dssp CSSCCC-----CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCT--TCSEEECCSSC
T ss_pred CCCccC-----cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcccccccc--ccceeeccccc
Confidence 999998 46665 58899999999999999998888999999999999999999976444433 34444444443
Q ss_pred CCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCC
Q 002149 237 GGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVP 315 (959)
Q Consensus 237 ~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip 315 (959)
... +...++|++|++++|.++. +|.. ..++|+.|+|++|++++. ..+..+ +|+.|+|++|.+++..|
T Consensus 198 l~~-------~~~~~~L~~L~l~~n~l~~-~~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~ 265 (390)
T 3o6n_A 198 LST-------LAIPIAVEELDASHNSINV-VRGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMY 265 (390)
T ss_dssp CSE-------EECCSSCSEEECCSSCCCE-EECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEES
T ss_pred ccc-------cCCCCcceEEECCCCeeee-cccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcCh
Confidence 322 3345689999999999884 4443 257899999999999864 355555 69999999999886544
Q ss_pred cccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCccccc
Q 002149 316 KSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGT 395 (959)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 395 (959)
. .++.+++|+.|+|++|++++
T Consensus 266 ~----------------------------------------------------------~~~~l~~L~~L~L~~n~l~~- 286 (390)
T 3o6n_A 266 H----------------------------------------------------------PFVKMQRLERLYISNNRLVA- 286 (390)
T ss_dssp G----------------------------------------------------------GGTTCSSCCEEECCSSCCCE-
T ss_pred h----------------------------------------------------------HccccccCCEEECCCCcCcc-
Confidence 3 23456889999999999985
Q ss_pred CCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCC-CCCCcceecccCCCCCCCC
Q 002149 396 LSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLP-KFSGAVKLSLDGNPLLNGK 464 (959)
Q Consensus 396 ~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~~~l~~N~~~c~~ 464 (959)
+|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++.... .+..+..+.+.+|+|.|..
T Consensus 287 ~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 287 LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHH
T ss_pred cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCccchh
Confidence 5667788999999999999998 678888899999999999999986533 4667888999999999864
No 271
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.98 E-value=3.8e-32 Score=327.37 Aligned_cols=336 Identities=20% Similarity=0.291 Sum_probs=270.9
Q ss_pred CCcEEEEEecCCccccc-----------------Cccccc--CCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCC
Q 002149 78 NSRVTQIQVSSVGLKGT-----------------LPQNLN--QLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNN 137 (959)
Q Consensus 78 ~~~v~~l~l~~~~l~g~-----------------~~~~l~--~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~ 137 (959)
..+++.|+|++|.++|. +|+.++ ++++|++|+|++|.+.+.+| .|.++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 46899999999999986 999999 99999999999999999888 69999999999999998
Q ss_pred -CCC-CChhhhcCC------CCCcEEEccCcccCCCCCCCCCc--cccCccccCeecccccccCCCCChhhcCCCCCCEE
Q 002149 138 -FDT-IPADFFDGL------ENLQVLALDSNNFNASKGWSFPK--GLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNL 207 (959)
Q Consensus 138 -l~~-i~~~~~~~l------~~L~~L~Ls~N~l~~~~~~~lp~--~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L 207 (959)
+++ ..+..+..+ ++|++|+|++|+++ .+|. .+..+++|+.|++++|+++|.+| .|..+++|+.|
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-----~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L 358 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-----TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASL 358 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-----SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEE
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-----ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEE
Confidence 886 334446665 99999999999998 5788 89999999999999999999999 89999999999
Q ss_pred EecCCcCCCCCCcccccC-C-cccccccccCCCCcccccccccCC--cCCcEEEccCccccccCchhhc-------CCCC
Q 002149 208 KLSGNNLTGPIPESFKGL-N-LVNLWLNDQKGGGFTGTIDVLGNM--DQLRTLWLHGNHFSGTIPESFG-------KLTS 276 (959)
Q Consensus 208 ~Ls~N~l~~~~p~~~~~l-~-l~~L~~~~~~~~~l~~~~~~l~~l--~~L~~L~L~~N~l~~~~p~~~~-------~l~~ 276 (959)
+|++|+++ .+|..+..+ + ++.|.+.++....++ +.+..+ ++|++|+|++|++++.+|..|. .+++
T Consensus 359 ~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~ 434 (636)
T 4eco_A 359 NLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIP---NIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGIN 434 (636)
T ss_dssp ECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCC---SCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCC
T ss_pred ECCCCccc-cccHhhhhhcccCcEEEccCCcCcccc---hhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCC
Confidence 99999999 778777776 4 777777777655443 344544 4899999999999999998888 7889
Q ss_pred CCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCccc-------------ccccccccCcccCCCCCCCCchhh
Q 002149 277 LKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSK-------------AYKYSYSSNAFCQPTEGVPCAPEV 342 (959)
Q Consensus 277 L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 342 (959)
|++|+|++|+|+..++..+..+ +|+.|+|++|+++ .+|... ...+.+++|.+...+....
T Consensus 435 L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~----- 508 (636)
T 4eco_A 435 VSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFR----- 508 (636)
T ss_dssp EEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCCBCCGGGS-----
T ss_pred CCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCCccChhhh-----
Confidence 9999999999996655556655 6999999999998 677542 2234567777764332211
Q ss_pred HHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEEC------CCCcccccCCccccCcCcCCEEeCccccc
Q 002149 343 MALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNL------PNFNLSGTLSPSVGNLDSLTQIKLQSNNI 416 (959)
Q Consensus 343 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~L~~N~l 416 (959)
...++.+.......+.... ++..++.+++|+.|+| ++|++.+.+|..++++++|++|+|++|+|
T Consensus 509 ---------~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 509 ---------ATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI 578 (636)
T ss_dssp ---------TTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred ---------hccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC
Confidence 0012233333344444444 4455677899999999 56889999999999999999999999999
Q ss_pred ccccCCCccCCCCCCeEeCCCCccCC
Q 002149 417 SGQIPTNWTNLKSLTLLDLSQNNLSP 442 (959)
Q Consensus 417 ~g~~p~~l~~l~~L~~L~Ls~N~l~~ 442 (959)
+.+|..+. ++|+.|||++|++..
T Consensus 579 -~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 579 -RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp -CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred -CccCHhHh--CcCCEEECcCCCCcc
Confidence 58998877 899999999998864
No 272
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.98 E-value=5.9e-32 Score=313.71 Aligned_cols=308 Identities=21% Similarity=0.219 Sum_probs=241.5
Q ss_pred CCcEEEEEecCCcccccCc-ccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCC--hhhhcCCCCCc
Q 002149 78 NSRVTQIQVSSVGLKGTLP-QNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIP--ADFFDGLENLQ 153 (959)
Q Consensus 78 ~~~v~~l~l~~~~l~g~~~-~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~--~~~~~~l~~L~ 153 (959)
..+++.|+++++.+.+.++ ..|..+++|++|+|++|.+++..| .|.++++|++|+|++|++++.. ...|..+++|+
T Consensus 53 l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~ 132 (455)
T 3v47_A 53 LQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLE 132 (455)
T ss_dssp CTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCC
T ss_pred CccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCC
Confidence 3579999999999987664 568999999999999999998877 6999999999999999998733 34589999999
Q ss_pred EEEccCcccCCCCCCCCCcc-ccCccccCeecccccccCCCCChhhcCC--CCCCEEEecCCcCCCCCCcccc-------
Q 002149 154 VLALDSNNFNASKGWSFPKG-LQSSAQLTNLSCMSCNLAGQLPDFLGNF--ASLQNLKLSGNNLTGPIPESFK------- 223 (959)
Q Consensus 154 ~L~Ls~N~l~~~~~~~lp~~-l~~l~~L~~L~l~~n~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~------- 223 (959)
+|+|++|++++ ..|.. +..+++|++|++++|++.+..+..+..+ .+|+.|++++|.+.+..+..+.
T Consensus 133 ~L~L~~n~l~~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~ 208 (455)
T 3v47_A 133 MLVLRDNNIKK----IQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNP 208 (455)
T ss_dssp EEECCSSBCCS----CCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCT
T ss_pred EEECCCCccCc----cCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccc
Confidence 99999999986 33554 7889999999999999998888877765 4555555555555543332211
Q ss_pred --cCCcccccccccCCCC----------------------------------ccccc-cccc--CCcCCcEEEccCcccc
Q 002149 224 --GLNLVNLWLNDQKGGG----------------------------------FTGTI-DVLG--NMDQLRTLWLHGNHFS 264 (959)
Q Consensus 224 --~l~l~~L~~~~~~~~~----------------------------------l~~~~-~~l~--~l~~L~~L~L~~N~l~ 264 (959)
..++..|.+.++.... +.... ..+. ..++|++|+|++|+++
T Consensus 209 ~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 288 (455)
T 3v47_A 209 FKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF 288 (455)
T ss_dssp TTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCC
T ss_pred cccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCcccc
Confidence 0122333332222110 00000 0111 2368999999999999
Q ss_pred ccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhH
Q 002149 265 GTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVM 343 (959)
Q Consensus 265 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (959)
+.+|..|..+++|++|+|++|++++..|..+..+ +|+.|+|++|.+++..|.
T Consensus 289 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--------------------------- 341 (455)
T 3v47_A 289 ALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSR--------------------------- 341 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGG---------------------------
T ss_pred ccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChh---------------------------
Confidence 8889999999999999999999999888888887 699999999998754442
Q ss_pred HHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCC
Q 002149 344 ALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTN 423 (959)
Q Consensus 344 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 423 (959)
.++.+++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..
T Consensus 342 -------------------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 390 (455)
T 3v47_A 342 -------------------------------MFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGI 390 (455)
T ss_dssp -------------------------------GGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred -------------------------------HhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhH
Confidence 2345689999999999999999999999999999999999999766677
Q ss_pred ccCCCCCCeEeCCCCccCCCCCCC
Q 002149 424 WTNLKSLTLLDLSQNNLSPPLPKF 447 (959)
Q Consensus 424 l~~l~~L~~L~Ls~N~l~~~~p~~ 447 (959)
+..+++|+.|+|++|++++..|..
T Consensus 391 ~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 391 FDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp TTTCTTCCEEECCSSCBCCCTTTT
T ss_pred hccCCcccEEEccCCCcccCCCcc
Confidence 899999999999999999999854
No 273
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.97 E-value=8.9e-31 Score=319.79 Aligned_cols=370 Identities=22% Similarity=0.210 Sum_probs=265.5
Q ss_pred CcEEEEEecCCcccccCcccccCCCC--CcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEE
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSK--LENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVL 155 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~--L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 155 (959)
..++.|+++++.+++..|..+..++. |++|+|++|.+++.++ .|.++++|++|+|++|+++++++..|.++++|++|
T Consensus 222 ~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (680)
T 1ziw_A 222 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL 301 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEE
T ss_pred ccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEE
Confidence 46788888899898888888888765 9999999999988877 58889999999999999999888889999999999
Q ss_pred EccCcccCCCCC-CCCCc----cccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCC--CCcccccC---
Q 002149 156 ALDSNNFNASKG-WSFPK----GLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGP--IPESFKGL--- 225 (959)
Q Consensus 156 ~Ls~N~l~~~~~-~~lp~----~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~p~~~~~l--- 225 (959)
+|++|...+... ..+|. .+..+++|+.|++++|++.+..+..|.++++|++|+|++|.+... ....|..+
T Consensus 302 ~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~ 381 (680)
T 1ziw_A 302 NLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHS 381 (680)
T ss_dssp ECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTS
T ss_pred eccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccC
Confidence 998876542110 12333 677888999999999999988888889999999999998875432 22233332
Q ss_pred CcccccccccCCCCcccccccccCCcCCcEEEccCccccccCc-hhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeE
Q 002149 226 NLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIP-ESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHL 303 (959)
Q Consensus 226 ~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L 303 (959)
++..|.+.++....+. ...+..+++|++|+|++|++++.+| ..|..+++|++|+|++|++++..+..+..+ +|+.|
T Consensus 382 ~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L 459 (680)
T 1ziw_A 382 PLHILNLTKNKISKIE--SDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRL 459 (680)
T ss_dssp CCCEEECTTSCCCEEC--TTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEE
T ss_pred cCceEECCCCCCCeEC--hhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccc
Confidence 3444444444333221 2456777888888888888876655 677778888888888888777777666665 47777
Q ss_pred eCCCCcCC--CCCCccc-----ccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcc-----
Q 002149 304 DLNNNMFM--GPVPKSK-----AYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSW----- 371 (959)
Q Consensus 304 ~L~~N~l~--~~ip~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----- 371 (959)
++++|.++ +.+|..+ ...+.+++|.+...+.... ..++.+.......+.....
T Consensus 460 ~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~---------------~~l~~L~~L~Ls~N~l~~~~~~~~ 524 (680)
T 1ziw_A 460 MLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDML---------------EGLEKLEILDLQHNNLARLWKHAN 524 (680)
T ss_dssp ECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTT---------------TTCTTCCEEECCSSCCGGGGSTTS
T ss_pred hhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhh---------------ccccccCEEeCCCCCccccchhhc
Confidence 77777765 3444432 2223455565554333211 0111122222222221111
Q ss_pred ---cccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCCC--
Q 002149 372 ---LGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLPK-- 446 (959)
Q Consensus 372 ---~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-- 446 (959)
....++.+++|+.|+|++|+++...+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.+|.
T Consensus 525 ~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 604 (680)
T 1ziw_A 525 PGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVF 604 (680)
T ss_dssp TTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHH
T ss_pred cCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHh
Confidence 111256789999999999999955556799999999999999999976667789999999999999999988773
Q ss_pred ---CCCcceecccCCCCCCCCC
Q 002149 447 ---FSGAVKLSLDGNPLLNGKS 465 (959)
Q Consensus 447 ---~~~~~~~~l~~N~~~c~~~ 465 (959)
+.++..+.+.+|||.|+..
T Consensus 605 ~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 605 GPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp HHHHTTCSEEECTTCCCCBCCC
T ss_pred cccccccCEEEccCCCcccCCc
Confidence 4678899999999999864
No 274
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=1.5e-31 Score=327.25 Aligned_cols=318 Identities=19% Similarity=0.265 Sum_probs=244.6
Q ss_pred cCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCc-CCC-CCC-CccCC-------CCccEEecCCCCCCCCCh-hh
Q 002149 77 SNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQ-FRG-ELP-SFSGL-------SNLKYAYLDGNNFDTIPA-DF 145 (959)
Q Consensus 77 ~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~-l~~-~~~-~~~~l-------~~L~~L~L~~N~l~~i~~-~~ 145 (959)
...+++.|+|++|++.|.+|..+.+|++|++|+|++|+ +++ .+| .|.++ ++|++|+|++|+|+.+|. ..
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~ 568 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASAS 568 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHH
T ss_pred cCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhh
Confidence 34578899999999999999999999999999999998 887 455 45444 499999999999998876 46
Q ss_pred hcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCC-CCEEEecCCcCCCCCCccccc
Q 002149 146 FDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFAS-LQNLKLSGNNLTGPIPESFKG 224 (959)
Q Consensus 146 ~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~ 224 (959)
|.++++|++|+|++|+++ .+| .+..+++|+.|++++|++. .+|..+..+++ |+.|+|++|+++ .+|..+..
T Consensus 569 l~~L~~L~~L~Ls~N~l~-----~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~ 640 (876)
T 4ecn_A 569 LQKMVKLGLLDCVHNKVR-----HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNA 640 (876)
T ss_dssp HTTCTTCCEEECTTSCCC-----BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCT
T ss_pred hhcCCCCCEEECCCCCcc-----cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhc
Confidence 889999999999999987 467 7888999999999999998 78888888988 999999999998 77877766
Q ss_pred CC---cccccccccCCCCccc-cccccc--CCcCCcEEEccCccccccCchhh-cCCCCCCEEeCCCCcCCCCCcccccc
Q 002149 225 LN---LVNLWLNDQKGGGFTG-TIDVLG--NMDQLRTLWLHGNHFSGTIPESF-GKLTSLKDLNLNSNQFVGLIPPSLAS 297 (959)
Q Consensus 225 l~---l~~L~~~~~~~~~l~~-~~~~l~--~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~ 297 (959)
+. +..|.+.++...+... ....+. .+++|+.|+|++|+++ .+|..+ ..+++|+.|+|++|+|+..++..+..
T Consensus 641 ~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~ 719 (876)
T 4ecn_A 641 KSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKP 719 (876)
T ss_dssp TCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSC
T ss_pred cccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhcc
Confidence 64 4555555444332211 111122 3458888999999888 455544 47888999999999888554444443
Q ss_pred c--------cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCC
Q 002149 298 L--------SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCK 369 (959)
Q Consensus 298 ~--------~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 369 (959)
. +|+.|+|++|+++ .+|....
T Consensus 720 ~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~-------------------------------------------------- 748 (876)
T 4ecn_A 720 KDGNYKNTYLLTTIDLRFNKLT-SLSDDFR-------------------------------------------------- 748 (876)
T ss_dssp TTSCCTTGGGCCEEECCSSCCC-CCCGGGS--------------------------------------------------
T ss_pred ccccccccCCccEEECCCCCCc-cchHHhh--------------------------------------------------
Confidence 3 6888899888887 4553210
Q ss_pred cccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcc------cccccccCCCccCCCCCCeEeCCCCccCCC
Q 002149 370 SWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQS------NNISGQIPTNWTNLKSLTLLDLSQNNLSPP 443 (959)
Q Consensus 370 ~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~------N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~ 443 (959)
...+++|+.|+|++|+|++ +|..+.++++|+.|+|++ |++.+.+|..|.++++|+.|+|++|+| +.
T Consensus 749 ------~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~ 820 (876)
T 4ecn_A 749 ------ATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RK 820 (876)
T ss_dssp ------TTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CB
T ss_pred ------hccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-Cc
Confidence 0145788999999999987 788888899999998876 778888898899999999999999998 66
Q ss_pred CCC--CCCcceecccCCCCCC
Q 002149 444 LPK--FSGAVKLSLDGNPLLN 462 (959)
Q Consensus 444 ~p~--~~~~~~~~l~~N~~~c 462 (959)
+|. +..+..+++.+|++..
T Consensus 821 Ip~~l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 821 VDEKLTPQLYILDIADNPNIS 841 (876)
T ss_dssp CCSCCCSSSCEEECCSCTTCE
T ss_pred cCHhhcCCCCEEECCCCCCCc
Confidence 665 3456778888888764
No 275
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=2.2e-31 Score=310.79 Aligned_cols=301 Identities=18% Similarity=0.192 Sum_probs=263.0
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.|+|++|.+++..|..|.++++|++|+|++|.++..++ .|.++++|++|+|++|+++.+++..|.++++|++|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 479999999999999889999999999999999999998887 5899999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCC
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKG 237 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~ 237 (959)
++|.+.. ..+..+..+++|+.|++++|++++..+..|..+++|+.|+|++|++.+..+..
T Consensus 136 ~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~---------------- 195 (477)
T 2id5_A 136 GDNDLVY----ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS---------------- 195 (477)
T ss_dssp CCTTCCE----ECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTC----------------
T ss_pred CCCccce----eChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhh----------------
Confidence 9999986 34667889999999999999999888888999999999999999999766655
Q ss_pred CCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCc
Q 002149 238 GGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPK 316 (959)
Q Consensus 238 ~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~ 316 (959)
+..+++|++|+|++|.+.+.+|..+....+|++|+|++|++++.++..+..+ +|+.|+|++|.+++..+.
T Consensus 196 ---------~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 266 (477)
T 2id5_A 196 ---------FKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGS 266 (477)
T ss_dssp ---------SCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTT
T ss_pred ---------cccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChh
Confidence 5677999999999999988888888888899999999999998777778877 699999999999854332
Q ss_pred ccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccC
Q 002149 317 SKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTL 396 (959)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 396 (959)
.+..+++|+.|+|++|++.+..
T Consensus 267 ----------------------------------------------------------~~~~l~~L~~L~L~~n~l~~~~ 288 (477)
T 2id5_A 267 ----------------------------------------------------------MLHELLRLQEIQLVGGQLAVVE 288 (477)
T ss_dssp ----------------------------------------------------------SCTTCTTCCEEECCSSCCSEEC
T ss_pred ----------------------------------------------------------hccccccCCEEECCCCccceEC
Confidence 2345689999999999999999
Q ss_pred CccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCCC--C-CCcceecccCCCCCCCCCC
Q 002149 397 SPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLPK--F-SGAVKLSLDGNPLLNGKSP 466 (959)
Q Consensus 397 p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~--~-~~~~~~~l~~N~~~c~~~~ 466 (959)
|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++....+. + .......+.++...|..+.
T Consensus 289 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 289 PYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp TTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred HHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 99999999999999999999977777889999999999999999865432 1 1223356677888887543
No 276
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=8.1e-31 Score=312.23 Aligned_cols=314 Identities=20% Similarity=0.233 Sum_probs=245.4
Q ss_pred CCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCC-hhhhcCCCCCcEEE
Q 002149 78 NSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIP-ADFFDGLENLQVLA 156 (959)
Q Consensus 78 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~-~~~~~~l~~L~~L~ 156 (959)
..+++.|+|++|.+++..|..|.++++|++|+|++|+|+..++. .+++|++|+|++|+|+.++ +..|.++++|++|+
T Consensus 75 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~ 152 (562)
T 3a79_B 75 LSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLG 152 (562)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEE
T ss_pred CCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEe
Confidence 35899999999999988899999999999999999999966555 8999999999999999987 47899999999999
Q ss_pred ccCcccCCCCCCCCCccccCcccc--Ceeccccccc--CCCCChhhcCCC------------------------------
Q 002149 157 LDSNNFNASKGWSFPKGLQSSAQL--TNLSCMSCNL--AGQLPDFLGNFA------------------------------ 202 (959)
Q Consensus 157 Ls~N~l~~~~~~~lp~~l~~l~~L--~~L~l~~n~l--~~~~p~~l~~l~------------------------------ 202 (959)
|++|+++. ..+..+++| +.|++++|++ ++..|..+..+.
T Consensus 153 L~~n~l~~-------~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~ 225 (562)
T 3a79_B 153 LSAAKFRQ-------LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQL 225 (562)
T ss_dssp EECSBCCT-------TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEE
T ss_pred cCCCcccc-------CchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEE
Confidence 99999975 234455555 9999999999 777777666544
Q ss_pred ---------------------------------------------------CCCEEEecCCcCCCCCCccccc---CCcc
Q 002149 203 ---------------------------------------------------SLQNLKLSGNNLTGPIPESFKG---LNLV 228 (959)
Q Consensus 203 ---------------------------------------------------~L~~L~Ls~N~l~~~~p~~~~~---l~l~ 228 (959)
+|++|++++|++++.+|..+.. -++.
T Consensus 226 L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~ 305 (562)
T 3a79_B 226 SNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALK 305 (562)
T ss_dssp EEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCC
T ss_pred ecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccch
Confidence 7788888888888888876511 0122
Q ss_pred cccccccCCCCc--------------------------ccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeC
Q 002149 229 NLWLNDQKGGGF--------------------------TGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNL 282 (959)
Q Consensus 229 ~L~~~~~~~~~l--------------------------~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 282 (959)
.|.+.++..+.+ ... .....+++|++|+|++|++++.+|..+..+++|++|+|
T Consensus 306 ~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 384 (562)
T 3a79_B 306 SLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHM-VCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLIL 384 (562)
T ss_dssp EEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCC-CCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEEC
T ss_pred heehhhcccceeecChhhhhhhhccCcceEEEccCCCcccc-cCccCCCCceEEECCCCccccchhhhhcccCCCCEEEC
Confidence 222222221111 110 11267899999999999999989999999999999999
Q ss_pred CCCcCCCCC--ccccccc-cCCeEeCCCCcCCCCCCcccc------cccccccCcccCCCCCCCCchhhHHHHhhccCCC
Q 002149 283 NSNQFVGLI--PPSLASL-SLDHLDLNNNMFMGPVPKSKA------YKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLN 353 (959)
Q Consensus 283 s~N~l~~~~--p~~~~~~-~L~~L~L~~N~l~~~ip~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (959)
++|++++.. |..+..+ +|+.|+|++|++++.+|.... ..+.+++|.+.
T Consensus 385 ~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~----------------------- 441 (562)
T 3a79_B 385 QRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLT----------------------- 441 (562)
T ss_dssp CSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCC-----------------------
T ss_pred CCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCC-----------------------
Confidence 999999753 4667776 699999999999987775311 11222333221
Q ss_pred CCcccccccCCCCCCCcccccccCCC-CcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCC-ccCCCCCC
Q 002149 354 YPPRLVTSWSGNDPCKSWLGLSCGTN-SKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTN-WTNLKSLT 431 (959)
Q Consensus 354 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-l~~l~~L~ 431 (959)
. ..+..+ ++|+.|+|++|+|+ .+|..+.++++|++|+|++|+|+ .+|.. +..+++|+
T Consensus 442 ----------------~---~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~ 500 (562)
T 3a79_B 442 ----------------G---SVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQ 500 (562)
T ss_dssp ----------------G---GGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCC
T ss_pred ----------------c---chhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCC
Confidence 1 111122 68999999999999 78888889999999999999999 67766 99999999
Q ss_pred eEeCCCCccCCCCC
Q 002149 432 LLDLSQNNLSPPLP 445 (959)
Q Consensus 432 ~L~Ls~N~l~~~~p 445 (959)
.|+|++|++++..|
T Consensus 501 ~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 501 YIWLHDNPWDCTCP 514 (562)
T ss_dssp CEECCSCCBCCCHH
T ss_pred EEEecCCCcCCCcc
Confidence 99999999998765
No 277
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=6.9e-32 Score=297.68 Aligned_cols=274 Identities=18% Similarity=0.252 Sum_probs=164.3
Q ss_pred CCChhhHHHHHHHHHhcC-CC--CCCCC----CCCCCCCCCCCCcceEecC----------CcEEEEEecCCcccccCcc
Q 002149 35 ATDPGDIDILNQFRKNLE-NP--ELLQW----PKSGDPCGPPCWKHVFCSN----------SRVTQIQVSSVGLKGTLPQ 97 (959)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~-~~--~~~~w----~~~~~~C~~~~w~gv~C~~----------~~v~~l~l~~~~l~g~~~~ 97 (959)
++-.+|+.||++||+++. ++ +..+| ....+.|. |.|+.|+. .+|+.|+|++++++ .+|+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~---~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~ 98 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIET---RTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD 98 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCC---SHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccc---cCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh
Confidence 345678999999999883 43 25678 34555664 99999952 45555555555555 4555
Q ss_pred cccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCc
Q 002149 98 NLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSS 177 (959)
Q Consensus 98 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l 177 (959)
.+.++++|++|+|++|.|+..+..|.++++|++|+|++|+|+.+|.. |.++++|++|+|++|++
T Consensus 99 ~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp~~-l~~l~~L~~L~L~~n~~--------------- 162 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALPAS-IASLNRLRELSIRACPE--------------- 162 (328)
T ss_dssp CGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCCGG-GGGCTTCCEEEEEEETT---------------
T ss_pred hhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCcHH-HhcCcCCCEEECCCCCC---------------
Confidence 55555555555555555553322455555555555555555444332 44444444444444433
Q ss_pred cccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEE
Q 002149 178 AQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLW 257 (959)
Q Consensus 178 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~ 257 (959)
.+.+|..+.... ....+.++++|++|+
T Consensus 163 -------------------------------------~~~~p~~~~~~~----------------~~~~~~~l~~L~~L~ 189 (328)
T 4fcg_A 163 -------------------------------------LTELPEPLASTD----------------ASGEHQGLVNLQSLR 189 (328)
T ss_dssp -------------------------------------CCCCCSCSEEEC-----------------CCCEEESTTCCEEE
T ss_pred -------------------------------------ccccChhHhhcc----------------chhhhccCCCCCEEE
Confidence 333332221100 000133445555555
Q ss_pred ccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCC
Q 002149 258 LHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGV 336 (959)
Q Consensus 258 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~ 336 (959)
|++|+++ .+|..+..+++|++|+|++|++++.+ ..+..+ +|+.|+|++|.+.+.+|..
T Consensus 190 L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~-~~l~~l~~L~~L~Ls~n~~~~~~p~~------------------- 248 (328)
T 4fcg_A 190 LEWTGIR-SLPASIANLQNLKSLKIRNSPLSALG-PAIHHLPKLEELDLRGCTALRNYPPI------------------- 248 (328)
T ss_dssp EEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCC-GGGGGCTTCCEEECTTCTTCCBCCCC-------------------
T ss_pred CcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCc-hhhccCCCCCEEECcCCcchhhhHHH-------------------
Confidence 5555555 45555555555555555555555432 234443 3555555555555544431
Q ss_pred CCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCccccc
Q 002149 337 PCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNI 416 (959)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 416 (959)
++.+++|+.|+|++|++.+.+|..++++++|++|+|++|.+
T Consensus 249 ---------------------------------------~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 289 (328)
T 4fcg_A 249 ---------------------------------------FGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVN 289 (328)
T ss_dssp ---------------------------------------TTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTT
T ss_pred ---------------------------------------hcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCc
Confidence 22447788888888888888888888899999999999999
Q ss_pred ccccCCCccCCCCCCeEeCCCCccC
Q 002149 417 SGQIPTNWTNLKSLTLLDLSQNNLS 441 (959)
Q Consensus 417 ~g~~p~~l~~l~~L~~L~Ls~N~l~ 441 (959)
.+.+|..+.++++|+.+++..|.+.
T Consensus 290 ~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 290 LSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hhhccHHHhhccCceEEeCCHHHHH
Confidence 8899999999999999998877665
No 278
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=5.1e-31 Score=311.26 Aligned_cols=316 Identities=21% Similarity=0.237 Sum_probs=238.8
Q ss_pred cCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCC-hhhhcCCCCCcEE
Q 002149 77 SNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIP-ADFFDGLENLQVL 155 (959)
Q Consensus 77 ~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~-~~~~~~l~~L~~L 155 (959)
...+++.|+|++|.+++..|..|.++++|++|+|++|+|+.+++. .+++|++|+|++|+|+.++ +..|+++++|++|
T Consensus 43 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L 120 (520)
T 2z7x_B 43 SLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFL 120 (520)
T ss_dssp TCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEE
T ss_pred ccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccCCccEEeccCCccccccchhhhccCCcceEE
Confidence 346899999999999988899999999999999999999965555 8999999999999999864 5679999999999
Q ss_pred EccCcccCCCCCCCCCccccCcccc--Ceeccccccc--CCCCChhhcCCC-----------------------------
Q 002149 156 ALDSNNFNASKGWSFPKGLQSSAQL--TNLSCMSCNL--AGQLPDFLGNFA----------------------------- 202 (959)
Q Consensus 156 ~Ls~N~l~~~~~~~lp~~l~~l~~L--~~L~l~~n~l--~~~~p~~l~~l~----------------------------- 202 (959)
+|++|++++ ..+..+++| +.|++++|++ .+..|..+..+.
T Consensus 121 ~L~~n~l~~-------~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~ 193 (520)
T 2z7x_B 121 GLSTTHLEK-------SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLE 193 (520)
T ss_dssp EEEESSCCG-------GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEE
T ss_pred EecCcccch-------hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhccccee
Confidence 999999874 234555666 7777777777 555555555432
Q ss_pred ------------------------------------------------------CCCEEEecCCcCCCCCCccc-----c
Q 002149 203 ------------------------------------------------------SLQNLKLSGNNLTGPIPESF-----K 223 (959)
Q Consensus 203 ------------------------------------------------------~L~~L~Ls~N~l~~~~p~~~-----~ 223 (959)
+|++|++++|++++.+|..+ .
T Consensus 194 ~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~ 273 (520)
T 2z7x_B 194 LSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGT 273 (520)
T ss_dssp ECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSC
T ss_pred eccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccc
Confidence 67777777777777777766 3
Q ss_pred cC-CcccccccccCC-----------------------CCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCE
Q 002149 224 GL-NLVNLWLNDQKG-----------------------GGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKD 279 (959)
Q Consensus 224 ~l-~l~~L~~~~~~~-----------------------~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 279 (959)
.+ ++..+.+..+.. +.+... .....+++|++|+|++|++++.+|..+..+++|++
T Consensus 274 ~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 352 (520)
T 2z7x_B 274 SLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHM-LCPSKISPFLHLDFSNNLLTDTVFENCGHLTELET 352 (520)
T ss_dssp CCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCC-CCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCE
T ss_pred cCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccc-cchhhCCcccEEEeECCccChhhhhhhccCCCCCE
Confidence 33 222222222221 111111 11267889999999999999888999999999999
Q ss_pred EeCCCCcCCC--CCccccccc-cCCeEeCCCCcCCCCCCccc------ccccccccCcccCCCCCCCCchhhHHHHhhcc
Q 002149 280 LNLNSNQFVG--LIPPSLASL-SLDHLDLNNNMFMGPVPKSK------AYKYSYSSNAFCQPTEGVPCAPEVMALIDFLG 350 (959)
Q Consensus 280 L~Ls~N~l~~--~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (959)
|+|++|++++ .+|..+..+ +|+.|+|++|.+++.+|... ...+.+++|.+.
T Consensus 353 L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~-------------------- 412 (520)
T 2z7x_B 353 LILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILT-------------------- 412 (520)
T ss_dssp EECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCC--------------------
T ss_pred EEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCC--------------------
Confidence 9999999997 455667776 59999999999988666431 111222232221
Q ss_pred CCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCC-ccCCCC
Q 002149 351 GLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTN-WTNLKS 429 (959)
Q Consensus 351 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-l~~l~~ 429 (959)
......+ .++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|.. |..+++
T Consensus 413 -------------------~~~~~~l--~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~ 469 (520)
T 2z7x_B 413 -------------------DTIFRCL--PPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTS 469 (520)
T ss_dssp -------------------GGGGGSC--CTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTT
T ss_pred -------------------cchhhhh--cccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCc
Confidence 1111111 168999999999999 88888889999999999999999 57766 999999
Q ss_pred CCeEeCCCCccCCCCC
Q 002149 430 LTLLDLSQNNLSPPLP 445 (959)
Q Consensus 430 L~~L~Ls~N~l~~~~p 445 (959)
|+.|+|++|++++..+
T Consensus 470 L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 470 LQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CCEEECCSSCBCCCHH
T ss_pred ccEEECcCCCCcccCC
Confidence 9999999999998654
No 279
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=2.3e-30 Score=311.68 Aligned_cols=356 Identities=22% Similarity=0.200 Sum_probs=268.5
Q ss_pred EEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcc
Q 002149 83 QIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNN 161 (959)
Q Consensus 83 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 161 (959)
.+++++++++ .+|..+. ++|++|+|++|.+++.++ .|.++++|++|+|++|+|+.+++.+|.++++|++|+|++|+
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 4677777777 6777665 799999999999999888 79999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCC-CCCcccccC-CcccccccccCCCC
Q 002149 162 FNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTG-PIPESFKGL-NLVNLWLNDQKGGG 239 (959)
Q Consensus 162 l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l-~l~~L~~~~~~~~~ 239 (959)
++. ..|..+.++++|++|++++|++.+..+..++++++|++|+|++|++++ .+|..|..+ +++.|.+.++....
T Consensus 92 l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~ 167 (606)
T 3vq2_A 92 IQS----FSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167 (606)
T ss_dssp CCC----CCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCE
T ss_pred ccc----cChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCccee
Confidence 986 347889999999999999999998888899999999999999999987 568888877 56666666554332
Q ss_pred cccc-------------------------cc-------------------------------------------------
Q 002149 240 FTGT-------------------------ID------------------------------------------------- 245 (959)
Q Consensus 240 l~~~-------------------------~~------------------------------------------------- 245 (959)
+... .+
T Consensus 168 ~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l 247 (606)
T 3vq2_A 168 ITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNL 247 (606)
T ss_dssp ECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCC
T ss_pred cChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcc
Confidence 2110 00
Q ss_pred ------------------------------------------------------cccCCcCCcEEEccCccccccCch--
Q 002149 246 ------------------------------------------------------VLGNMDQLRTLWLHGNHFSGTIPE-- 269 (959)
Q Consensus 246 ------------------------------------------------------~l~~l~~L~~L~L~~N~l~~~~p~-- 269 (959)
.+..+++|++|++++|++ +.+|.
T Consensus 248 ~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~ 326 (606)
T 3vq2_A 248 EIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLD 326 (606)
T ss_dssp SCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCC
T ss_pred cccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCC
Confidence 012223444455555544 23331
Q ss_pred ------------------hhcCCCCCCEEeCCCCcCCCC--Cccccccc-cCCeEeCCCCcCCCCCCccc-----ccccc
Q 002149 270 ------------------SFGKLTSLKDLNLNSNQFVGL--IPPSLASL-SLDHLDLNNNMFMGPVPKSK-----AYKYS 323 (959)
Q Consensus 270 ------------------~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~~-~L~~L~L~~N~l~~~ip~~~-----~~~~~ 323 (959)
.+..+++|++|+|++|++++. .|..+..+ +|+.|+|++|.+++ +|... ...+.
T Consensus 327 l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~ 405 (606)
T 3vq2_A 327 LPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLD 405 (606)
T ss_dssp CSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEE
T ss_pred CCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeE
Confidence 345678999999999999976 36667766 69999999999886 33221 22345
Q ss_pred cccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccc-cCCccccC
Q 002149 324 YSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSG-TLSPSVGN 402 (959)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~-~~p~~~~~ 402 (959)
+++|.+....... .+..++.+.......+......+..++.+++|+.|+|++|++.+ .+|..++.
T Consensus 406 l~~n~l~~~~~~~--------------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 471 (606)
T 3vq2_A 406 FQHSTLKRVTEFS--------------AFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFAN 471 (606)
T ss_dssp CTTSEEESTTTTT--------------TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred CCCCccCCccChh--------------hhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhcc
Confidence 5666665432210 11122333333334444444445557778899999999999988 47888999
Q ss_pred cCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCCC----CCCcceecccCCCCC
Q 002149 403 LDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLPK----FSGAVKLSLDGNPLL 461 (959)
Q Consensus 403 l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~~~~~l~~N~~~ 461 (959)
+++|++|+|++|++++..|..|.++++|+.|+|++|++++.+|. +.++..+++.+|.+.
T Consensus 472 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 472 TTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 99999999999999988888899999999999999999887664 345778889988765
No 280
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=3.4e-30 Score=285.43 Aligned_cols=285 Identities=23% Similarity=0.315 Sum_probs=198.0
Q ss_pred EEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccC
Q 002149 81 VTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDS 159 (959)
Q Consensus 81 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 159 (959)
++.+++++++++ .+|..+. ++|++|+|++|.+++.++ .|.++++|++|+|++|+|+.+++..|.++++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 556788888887 6777664 689999999999999887 699999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCC--CCCcccccCCcccccccccCC
Q 002149 160 NNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTG--PIPESFKGLNLVNLWLNDQKG 237 (959)
Q Consensus 160 N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~l~~L~~~~~~~ 237 (959)
|+++ .+|..+. ++|++|++++|++.+..+..|..+++|+.|++++|.++. ..+..+..+++..|.+.++..
T Consensus 112 n~l~-----~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l 184 (332)
T 2ft3_A 112 NHLV-----EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKL 184 (332)
T ss_dssp SCCC-----SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBC
T ss_pred CcCC-----ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCC
Confidence 9998 4666655 799999999999998888889999999999999999963 667776655555555554444
Q ss_pred CCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCc
Q 002149 238 GGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPK 316 (959)
Q Consensus 238 ~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~ 316 (959)
..++.. + .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+ +|+.|+|++|+++ .+|.
T Consensus 185 ~~l~~~---~--~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 185 TGIPKD---L--PETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp SSCCSS---S--CSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred CccCcc---c--cCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 333321 1 1456666666666665555566666666666666666666555555554 4666666666655 3332
Q ss_pred ccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccC
Q 002149 317 SKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTL 396 (959)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 396 (959)
. ++.+++|+.|+|++|+|++..
T Consensus 259 ~----------------------------------------------------------l~~l~~L~~L~l~~N~l~~~~ 280 (332)
T 2ft3_A 259 G----------------------------------------------------------LPDLKLLQVVYLHTNNITKVG 280 (332)
T ss_dssp T----------------------------------------------------------GGGCTTCCEEECCSSCCCBCC
T ss_pred h----------------------------------------------------------hhcCccCCEEECCCCCCCccC
Confidence 1 112355666666666666555
Q ss_pred CccccCc------CcCCEEeCcccccc--cccCCCccCCCCCCeEeCCCCc
Q 002149 397 SPSVGNL------DSLTQIKLQSNNIS--GQIPTNWTNLKSLTLLDLSQNN 439 (959)
Q Consensus 397 p~~~~~l------~~L~~L~L~~N~l~--g~~p~~l~~l~~L~~L~Ls~N~ 439 (959)
+..|..+ .+|+.|+|++|.+. +..|..|..+++|+.|+|++|+
T Consensus 281 ~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 281 VNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp TTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred hhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 5444432 44566666666655 4445556666666666666553
No 281
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=311.97 Aligned_cols=350 Identities=21% Similarity=0.183 Sum_probs=264.2
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++.++ .|.++++|++|+|++|+++.+++..|+++++|++|+|
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 131 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEEC
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEec
Confidence 578999999999998778889999999999999999998887 6999999999999999999999878999999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCC----CEEEecCCcCCCCCCcccccC--------
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASL----QNLKLSGNNLTGPIPESFKGL-------- 225 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L----~~L~Ls~N~l~~~~p~~~~~l-------- 225 (959)
++|.++.+ .+|..+.++++|+.|++++|++.+..+..++.+++| +.|++++|.+++..|..|...
T Consensus 132 ~~n~l~~~---~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~ 208 (570)
T 2z63_A 132 AHNLIQSF---KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLR 208 (570)
T ss_dssp CSSCCCCC---CCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEE
T ss_pred CCCcccee---cChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEecc
Confidence 99998753 468889999999999999999887777766666666 667777766665444333221
Q ss_pred --------------------------------------------------------------------------------
Q 002149 226 -------------------------------------------------------------------------------- 225 (959)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (959)
T Consensus 209 ~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~ 288 (570)
T 2z63_A 209 NNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFS 288 (570)
T ss_dssp SCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEE
T ss_pred cccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEE
Confidence
Q ss_pred ----------------CcccccccccCCCCccccc-----------------ccccCCcCCcEEEccCccccccC--chh
Q 002149 226 ----------------NLVNLWLNDQKGGGFTGTI-----------------DVLGNMDQLRTLWLHGNHFSGTI--PES 270 (959)
Q Consensus 226 ----------------~l~~L~~~~~~~~~l~~~~-----------------~~l~~l~~L~~L~L~~N~l~~~~--p~~ 270 (959)
++..|.+.++....++... .....+++|++|+|++|++++.. |..
T Consensus 289 l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 368 (570)
T 2z63_A 289 LVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQS 368 (570)
T ss_dssp EESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHH
T ss_pred ecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCcccccccc
Confidence 1222222222211111100 00156789999999999998654 788
Q ss_pred hcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCcc------cccccccccCcccCCCCCCCCchhhH
Q 002149 271 FGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKS------KAYKYSYSSNAFCQPTEGVPCAPEVM 343 (959)
Q Consensus 271 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (959)
+..+++|++|+|++|.+++..+. +..+ +|+.|++++|.+++..|.. ....+.+++|.+....+..
T Consensus 369 ~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~------- 440 (570)
T 2z63_A 369 DFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI------- 440 (570)
T ss_dssp HHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTT-------
T ss_pred ccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhh-------
Confidence 99999999999999999976665 6666 6999999999998876632 1223455666554432211
Q ss_pred HHHhhccCCCCCcccccccCCCCCCC-cccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCC
Q 002149 344 ALIDFLGGLNYPPRLVTSWSGNDPCK-SWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPT 422 (959)
Q Consensus 344 ~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 422 (959)
+..++.+......++... ...+..++.+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|.
T Consensus 441 --------~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 512 (570)
T 2z63_A 441 --------FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDG 512 (570)
T ss_dssp --------TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred --------hhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHH
Confidence 111223333333333322 23445677889999999999999999999999999999999999999988888
Q ss_pred CccCCCCCCeEeCCCCccCCCCCCC
Q 002149 423 NWTNLKSLTLLDLSQNNLSPPLPKF 447 (959)
Q Consensus 423 ~l~~l~~L~~L~Ls~N~l~~~~p~~ 447 (959)
.|.++++|+.|++++|++++..|..
T Consensus 513 ~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 513 IFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp TTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred HhhcccCCcEEEecCCcccCCCcch
Confidence 8999999999999999999998863
No 282
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=8.7e-30 Score=281.93 Aligned_cols=292 Identities=22% Similarity=0.319 Sum_probs=216.8
Q ss_pred CCCCCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCC
Q 002149 63 GDPCGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTI 141 (959)
Q Consensus 63 ~~~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i 141 (959)
+..|+..| .| +++.+++.+++++ .+|..+. ++|++|+|++|.|++.++ .|.++++|++|+|++|+++.+
T Consensus 22 ~~~cp~~c----~c---~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 91 (330)
T 1xku_A 22 GPVCPFRC----QC---HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 91 (330)
T ss_dssp CCCCCTTC----EE---ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCB
T ss_pred cCCCCCCC----cC---CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCee
Confidence 35576444 45 3456777888877 5676554 689999999999999888 699999999999999999999
Q ss_pred ChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCC--CCC
Q 002149 142 PADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTG--PIP 219 (959)
Q Consensus 142 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p 219 (959)
.+..|.++++|++|+|++|+++ .+|..+. ++|++|++++|++.+..+..|.++++|+.|++++|.++. ..+
T Consensus 92 ~~~~~~~l~~L~~L~Ls~n~l~-----~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 164 (330)
T 1xku_A 92 SPGAFAPLVKLERLYLSKNQLK-----ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIEN 164 (330)
T ss_dssp CTTTTTTCTTCCEEECCSSCCS-----BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCT
T ss_pred CHHHhcCCCCCCEEECCCCcCC-----ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcCh
Confidence 8888999999999999999998 4565554 789999999999998888899999999999999999964 444
Q ss_pred cccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-
Q 002149 220 ESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL- 298 (959)
Q Consensus 220 ~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~- 298 (959)
.. +.++++|++|++++|+++ .+|..+. ++|++|+|++|++++..|..+..+
T Consensus 165 ~~-------------------------~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~ 216 (330)
T 1xku_A 165 GA-------------------------FQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLN 216 (330)
T ss_dssp TG-------------------------GGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCT
T ss_pred hh-------------------------ccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCC
Confidence 44 456677888888888877 4555443 678888888888877777777766
Q ss_pred cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCC
Q 002149 299 SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGT 378 (959)
Q Consensus 299 ~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 378 (959)
+|+.|+|++|.+++..+. .+..
T Consensus 217 ~L~~L~Ls~n~l~~~~~~----------------------------------------------------------~~~~ 238 (330)
T 1xku_A 217 NLAKLGLSFNSISAVDNG----------------------------------------------------------SLAN 238 (330)
T ss_dssp TCCEEECCSSCCCEECTT----------------------------------------------------------TGGG
T ss_pred CCCEEECCCCcCceeChh----------------------------------------------------------hccC
Confidence 588888888877654332 1123
Q ss_pred CCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccC------CCCCCeEeCCCCccCC--CCC-C---
Q 002149 379 NSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTN------LKSLTLLDLSQNNLSP--PLP-K--- 446 (959)
Q Consensus 379 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~------l~~L~~L~Ls~N~l~~--~~p-~--- 446 (959)
+++|+.|+|++|++. .+|..+..+++|++|+|++|+|++..+..|.. ...|+.|++++|++.. ..| .
T Consensus 239 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccccc
Confidence 467788888888877 67777777888888888888887655555543 3667778888887752 112 1
Q ss_pred CCCcceecccCC
Q 002149 447 FSGAVKLSLDGN 458 (959)
Q Consensus 447 ~~~~~~~~l~~N 458 (959)
...+..+.+.+|
T Consensus 318 ~~~l~~l~L~~N 329 (330)
T 1xku_A 318 VYVRAAVQLGNY 329 (330)
T ss_dssp CCCGGGEEC---
T ss_pred ccceeEEEeccc
Confidence 234455666665
No 283
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=2.2e-30 Score=310.17 Aligned_cols=306 Identities=18% Similarity=0.215 Sum_probs=258.0
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.|+|+++.+++..|..|..+++|++|+|++|.|++.+| .|+++++|++|+|++|.|+.+|+..|.++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 478999999999998888899999999999999999999988 5899999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCC
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKG 237 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~ 237 (959)
++|.|++ ..|..+..+++|+.|++++|++++.. +..+++|+.|++++|.+++.... .++..|.+.++..
T Consensus 155 s~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~----~~L~~L~ls~n~l 223 (597)
T 3oja_B 155 SNNNLER----IEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIP----IAVEELDASHNSI 223 (597)
T ss_dssp CSSCCCB----CCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECC----TTCSEEECCSSCC
T ss_pred eCCcCCC----CChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCC----chhheeeccCCcc
Confidence 9999986 45667899999999999999999753 56789999999999999863221 1456666666665
Q ss_pred CCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCc
Q 002149 238 GGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPK 316 (959)
Q Consensus 238 ~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~ 316 (959)
..+.+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.|++.+|..+..+ +|+.|+|++|.+++. |.
T Consensus 224 ~~~~~~~-----~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~ 295 (597)
T 3oja_B 224 NVVRGPV-----NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NL 295 (597)
T ss_dssp CEEECSC-----CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEE-EC
T ss_pred ccccccc-----CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCC-Cc
Confidence 5554422 3789999999999996 4789999999999999999999999999888 599999999999852 21
Q ss_pred ccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccC
Q 002149 317 SKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTL 396 (959)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 396 (959)
.++.+++|+.|+|++|.+. .+
T Consensus 296 ----------------------------------------------------------~~~~l~~L~~L~Ls~N~l~-~i 316 (597)
T 3oja_B 296 ----------------------------------------------------------YGQPIPTLKVLDLSHNHLL-HV 316 (597)
T ss_dssp ----------------------------------------------------------SSSCCTTCCEEECCSSCCC-CC
T ss_pred ----------------------------------------------------------ccccCCCCcEEECCCCCCC-cc
Confidence 1234589999999999999 68
Q ss_pred CccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCC--CCCCcceecccCCCCCCCCC
Q 002149 397 SPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLP--KFSGAVKLSLDGNPLLNGKS 465 (959)
Q Consensus 397 p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~~~~~l~~N~~~c~~~ 465 (959)
|..++.+++|+.|+|++|.|++. | +..+++|+.|+|++|++++... .+.......+.+|+..|+.+
T Consensus 317 ~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 317 ERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp GGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCTT
T ss_pred CcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCcc
Confidence 88899999999999999999854 3 7788999999999999986432 13344455677888888753
No 284
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=1.9e-29 Score=281.50 Aligned_cols=298 Identities=23% Similarity=0.342 Sum_probs=235.8
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEcc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALD 158 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 158 (959)
.+++.|++.++.+.. ++ .+..+++|++|+|++|.+++.++ |.++++|++|+|++|+++.++ .|.++++|++|+|+
T Consensus 44 ~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~~~~--~~~~l~~L~~L~l~ 118 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKITDIS--ALQNLTNLRELYLN 118 (347)
T ss_dssp TTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG--GGTTCTTCSEEECT
T ss_pred ccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh-hhcCCcCCEEEccCCcccCch--HHcCCCcCCEEECc
Confidence 578899999998874 44 48889999999999999987766 899999999999999999875 48999999999999
Q ss_pred CcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccC-CcccccccccCC
Q 002149 159 SNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGL-NLVNLWLNDQKG 237 (959)
Q Consensus 159 ~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~L~~~~~~~ 237 (959)
+|.+.. ++. +..+++|+.|++++|.....++. +..+++|++|++++|.+.+..+ +..+ ++..|.+.++..
T Consensus 119 ~n~i~~-----~~~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 119 EDNISD-----ISP-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp TSCCCC-----CGG-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred CCcccC-----chh-hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 999884 444 78899999999999977655544 8899999999999999986544 4443 466666666554
Q ss_pred CCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCc
Q 002149 238 GGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPK 316 (959)
Q Consensus 238 ~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~ 316 (959)
..+.. +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++..+ +..+ +|+.|++++|.+++. +
T Consensus 190 ~~~~~----~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~- 259 (347)
T 4fmz_A 190 EDISP----LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-N- 259 (347)
T ss_dssp CCCGG----GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G-
T ss_pred ccccc----ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-h-
Confidence 44433 6777888888888888885444 7788888888888888886544 5555 588888888887641 1
Q ss_pred ccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccC
Q 002149 317 SKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTL 396 (959)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 396 (959)
.+..+++|+.|+|++|++++.
T Consensus 260 ----------------------------------------------------------~~~~l~~L~~L~l~~n~l~~~- 280 (347)
T 4fmz_A 260 ----------------------------------------------------------AVKDLTKLKMLNVGSNQISDI- 280 (347)
T ss_dssp ----------------------------------------------------------GGTTCTTCCEEECCSSCCCCC-
T ss_pred ----------------------------------------------------------hHhcCCCcCEEEccCCccCCC-
Confidence 123457899999999999864
Q ss_pred CccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCC--CCCCcceecccCCCC
Q 002149 397 SPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLP--KFSGAVKLSLDGNPL 460 (959)
Q Consensus 397 p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~~~~~l~~N~~ 460 (959)
+.+..+++|++|+|++|++++..|..+..+++|+.|+|++|++++.+| .+.++..+++.+|++
T Consensus 281 -~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 281 -SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVI 345 (347)
T ss_dssp -GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC--
T ss_pred -hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhcc
Confidence 458888999999999999998888889999999999999999988766 356677888888875
No 285
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=7e-30 Score=289.69 Aligned_cols=305 Identities=19% Similarity=0.214 Sum_probs=254.1
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.|+++++.+++..+..+..+++|++|+|++|.+++.++ .|.++++|++|+|++|+|+.+++..|.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 579999999999998777899999999999999999999988 5899999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCC
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKG 237 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~ 237 (959)
++|+++. ..|..+..+++|+.|++++|++++. .+..+++|+.|++++|.+++.... .++..|.+.++..
T Consensus 149 ~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~~~~----~~L~~L~l~~n~l 217 (390)
T 3o6n_A 149 SNNNLER----IEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTLAIP----IAVEELDASHNSI 217 (390)
T ss_dssp CSSCCCB----CCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEEECC----SSCSEEECCSSCC
T ss_pred CCCccCc----cChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccccCCC----CcceEEECCCCee
Confidence 9999986 3456688999999999999999975 356789999999999999853211 1456666666665
Q ss_pred CCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCc
Q 002149 238 GGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPK 316 (959)
Q Consensus 238 ~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~ 316 (959)
..++. ...++|+.|+|++|++++. ..+..+++|++|+|++|.+++..|..+..+ +|+.|+|++|++++. |.
T Consensus 218 ~~~~~-----~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~ 289 (390)
T 3o6n_A 218 NVVRG-----PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NL 289 (390)
T ss_dssp CEEEC-----CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEE-EC
T ss_pred eeccc-----cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCccc-Cc
Confidence 55543 2357999999999999964 588999999999999999999989888887 699999999999752 21
Q ss_pred ccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccC
Q 002149 317 SKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTL 396 (959)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 396 (959)
..+.+++|+.|+|++|++. .+
T Consensus 290 ----------------------------------------------------------~~~~l~~L~~L~L~~n~l~-~~ 310 (390)
T 3o6n_A 290 ----------------------------------------------------------YGQPIPTLKVLDLSHNHLL-HV 310 (390)
T ss_dssp ----------------------------------------------------------SSSCCTTCCEEECCSSCCC-CC
T ss_pred ----------------------------------------------------------ccCCCCCCCEEECCCCcce-ec
Confidence 1234589999999999999 67
Q ss_pred CccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCC--CCCCcceecccCCCCCCCC
Q 002149 397 SPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLP--KFSGAVKLSLDGNPLLNGK 464 (959)
Q Consensus 397 p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~~~~~l~~N~~~c~~ 464 (959)
|..+..+++|++|+|++|+|++ +| +..+++|+.|++++|+++..-. .+.......+.+++..|..
T Consensus 311 ~~~~~~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 311 ERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp GGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCCT
T ss_pred CccccccCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceecc
Confidence 7789999999999999999984 44 7889999999999999975322 1333344456677777764
No 286
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=2.3e-29 Score=313.47 Aligned_cols=343 Identities=20% Similarity=0.201 Sum_probs=251.3
Q ss_pred EEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCC-CCCCChhhhcCCCCCcEEEccCc
Q 002149 83 QIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNN-FDTIPADFFDGLENLQVLALDSN 160 (959)
Q Consensus 83 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~-l~~i~~~~~~~l~~L~~L~Ls~N 160 (959)
.++.++++++ .+|. -.++|++|||++|.|++..+ .|.++++|++|+|++|. +..+++..|.++++|++|+|++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 4666777777 5565 45799999999999999877 79999999999999995 55788889999999999999999
Q ss_pred ccCCCCCCCCCccccCccccCeecccccccCCCCChh--hcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCC
Q 002149 161 NFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDF--LGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGG 238 (959)
Q Consensus 161 ~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~ 238 (959)
.|.+ ..|..+.++++|++|+|++|++++.+|.. |.++++|++|+|++|.+++..+...
T Consensus 84 ~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~---------------- 143 (844)
T 3j0a_A 84 KIYF----LHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPS---------------- 143 (844)
T ss_dssp CCCE----ECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGG----------------
T ss_pred cCcc----cCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchh----------------
Confidence 9986 45888999999999999999999877765 9999999999999999997665321
Q ss_pred CcccccccccCCcCCcEEEccCccccccCchhhcCC--CCCCEEeCCCCcCCCCCcccccc-------ccCCeEeCCCCc
Q 002149 239 GFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKL--TSLKDLNLNSNQFVGLIPPSLAS-------LSLDHLDLNNNM 309 (959)
Q Consensus 239 ~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~-------~~L~~L~L~~N~ 309 (959)
++++++|++|+|++|.+++..|..+..+ ++|+.|+|++|.+.+..|..+.. .+|+.|+|++|.
T Consensus 144 --------~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~ 215 (844)
T 3j0a_A 144 --------FGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNG 215 (844)
T ss_dssp --------GGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCC
T ss_pred --------HhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCc
Confidence 5677899999999999988888888877 88999999999998877765443 248899999998
Q ss_pred CCCCCCccccccc--------ccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCc
Q 002149 310 FMGPVPKSKAYKY--------SYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSK 381 (959)
Q Consensus 310 l~~~ip~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 381 (959)
+++.+|....... .+..+........... ... ....+..+ ..+.+.......+.........++.+++
T Consensus 216 l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l-~~~--~~~~f~~l-~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 291 (844)
T 3j0a_A 216 WTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNI-KDP--DQNTFAGL-ARSSVRHLDLSHGFVFSLNSRVFETLKD 291 (844)
T ss_dssp SSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSS-TTG--GGTTTTTT-TTSCCCEEECTTCCCCEECSCCSSSCCC
T ss_pred CchhHHHHHHhhcCcccccceeccccccccccccccc-CCC--Chhhhhcc-ccCCccEEECCCCcccccChhhhhcCCC
Confidence 8887775433211 1111111000000000 000 00000010 0122233333333344444455667788
Q ss_pred ccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCCC----CCCcceecccC
Q 002149 382 LTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLPK----FSGAVKLSLDG 457 (959)
Q Consensus 382 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~~~~~l~~ 457 (959)
|+.|+|++|++.+..|..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++..+. +.++..+.+.+
T Consensus 292 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~ 371 (844)
T 3j0a_A 292 LKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRD 371 (844)
T ss_dssp CCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEET
T ss_pred CCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCC
Confidence 88888888888888888888888888888888888877788888888888888888888766553 34566777777
Q ss_pred CCCC
Q 002149 458 NPLL 461 (959)
Q Consensus 458 N~~~ 461 (959)
|.+.
T Consensus 372 N~l~ 375 (844)
T 3j0a_A 372 NALT 375 (844)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 7654
No 287
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=3.3e-29 Score=291.01 Aligned_cols=315 Identities=28% Similarity=0.370 Sum_probs=231.7
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEcc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALD 158 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 158 (959)
.+++.|+|+++.+++. ++ +.++++|++|+|++|.+.+.++ |.++++|++|+|++|+++.+++ |.++++|++|+|+
T Consensus 68 ~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~ 142 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELS 142 (466)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEE
T ss_pred cCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh-hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECC
Confidence 5788899999998855 44 8899999999999999988776 8889999999999999998875 8899999999999
Q ss_pred CcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccC-CcccccccccCC
Q 002149 159 SNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGL-NLVNLWLNDQKG 237 (959)
Q Consensus 159 ~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~L~~~~~~~ 237 (959)
+|.+.. ++ .+..+++|+.|++. |++.+.. .+.++++|+.|++++|++++. + .+..+ +++.|.+.++..
T Consensus 143 ~n~l~~-----~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l 211 (466)
T 1o6v_A 143 SNTISD-----IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI-S-VLAKLTNLESLIATNNQI 211 (466)
T ss_dssp EEEECC-----CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCC
T ss_pred CCccCC-----Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC-h-hhccCCCCCEEEecCCcc
Confidence 998874 33 46777778888775 4444332 377888888888888888754 2 24443 566666665554
Q ss_pred CCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCc
Q 002149 238 GGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPK 316 (959)
Q Consensus 238 ~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~ 316 (959)
..+.. ++.+++|++|+|++|++++ + ..+..+++|++|+|++|++++..+ +..+ +|+.|++++|.+++..|-
T Consensus 212 ~~~~~----~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~ 283 (466)
T 1o6v_A 212 SDITP----LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 283 (466)
T ss_dssp CCCGG----GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGG
T ss_pred ccccc----ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccc
Confidence 44332 6677888888888888874 3 357778888888888888887654 5555 588888888888764321
Q ss_pred cc---ccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCccc
Q 002149 317 SK---AYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLS 393 (959)
Q Consensus 317 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~ 393 (959)
.. ...+.+++|.+ ..... ++.+++|+.|+|++|++.
T Consensus 284 ~~l~~L~~L~L~~n~l---------------------------------------~~~~~--~~~l~~L~~L~L~~n~l~ 322 (466)
T 1o6v_A 284 AGLTALTNLELNENQL---------------------------------------EDISP--ISNLKNLTYLTLYFNNIS 322 (466)
T ss_dssp TTCTTCSEEECCSSCC---------------------------------------SCCGG--GGGCTTCSEEECCSSCCS
T ss_pred cCCCccCeEEcCCCcc---------------------------------------cCchh--hcCCCCCCEEECcCCcCC
Confidence 00 00111222221 11111 345688999999999999
Q ss_pred ccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCC--CCCCcceecccCCCCCC
Q 002149 394 GTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLP--KFSGAVKLSLDGNPLLN 462 (959)
Q Consensus 394 ~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~~~~~l~~N~~~c 462 (959)
+..| +..+++|++|+|++|++++. ..+.++++|+.|++++|++++.+| .+..+..+.+.+|++..
T Consensus 323 ~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 323 DISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred Cchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 7766 78899999999999999864 478899999999999999998777 24556788899988765
No 288
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.96 E-value=2.5e-29 Score=299.02 Aligned_cols=204 Identities=21% Similarity=0.292 Sum_probs=160.8
Q ss_pred CCCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCCh
Q 002149 65 PCGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPA 143 (959)
Q Consensus 65 ~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~ 143 (959)
.|+ |.|+ |+ +.+++++ .+|+.+. ++|++|+|++|++++.+| .|.++++|++|+|++|+|+.+++
T Consensus 3 ~C~---~~~~-c~--------~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 67 (549)
T 2z81_A 3 SCD---ASGV-CD--------GRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEG 67 (549)
T ss_dssp EEC---TTSE-EE--------CTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECT
T ss_pred cCC---CCce-EE--------CCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccCh
Confidence 466 7776 74 3456666 6777665 799999999999999887 69999999999999999999999
Q ss_pred hhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCC-CCChhhcCCCCCCEEEecCCcCCCCCC-cc
Q 002149 144 DFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAG-QLPDFLGNFASLQNLKLSGNNLTGPIP-ES 221 (959)
Q Consensus 144 ~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~ 221 (959)
..|.++++|++|+|++|++++ ..|..+..+++|++|++++|++++ ..|..++++++|++|++++|++.+.+| ..
T Consensus 68 ~~~~~l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~ 143 (549)
T 2z81_A 68 DAFYSLGSLEHLDLSDNHLSS----LSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRID 143 (549)
T ss_dssp TTTTTCTTCCEEECTTSCCCS----CCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred hhccccccCCEEECCCCccCc----cCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhh
Confidence 999999999999999999985 334458999999999999999997 467889999999999999999554444 57
Q ss_pred cccC-CcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchh-hcCCCCCCEEeCCCCcCCCC
Q 002149 222 FKGL-NLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPES-FGKLTSLKDLNLNSNQFVGL 290 (959)
Q Consensus 222 ~~~l-~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~ 290 (959)
|..+ +++.|.+.++..... .+..+.++++|++|++++|.+. .+|.. +..+++|++|+|++|++++.
T Consensus 144 ~~~l~~L~~L~L~~n~l~~~--~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 211 (549)
T 2z81_A 144 FAGLTSLNELEIKALSLRNY--QSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARF 211 (549)
T ss_dssp TTTCCEEEEEEEEETTCCEE--CTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTC
T ss_pred hhcccccCeeeccCCccccc--ChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccc
Confidence 7766 567777766654432 2245677777778888777776 44443 34577777777777777764
No 289
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.2e-29 Score=275.59 Aligned_cols=247 Identities=23% Similarity=0.303 Sum_probs=167.5
Q ss_pred EEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCC-ccCCCCccEEecCCCCCCCCC--hhhhcCCCCCcEEEccC
Q 002149 83 QIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPS-FSGLSNLKYAYLDGNNFDTIP--ADFFDGLENLQVLALDS 159 (959)
Q Consensus 83 ~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~i~--~~~~~~l~~L~~L~Ls~ 159 (959)
.|++.+++++ .+|..+. ++|++|+|++|+++..++. |.++++|++|+|++|+++.+. +..+..+++|++|+|++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 3445555555 4565443 6899999999999977764 789999999999999998653 44566789999999999
Q ss_pred cccCCCCCCCCCccccCccccCeecccccccCCCCC-hhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCC
Q 002149 160 NNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLP-DFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGG 238 (959)
Q Consensus 160 N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~ 238 (959)
|.+. .+|..+..+++|++|++++|++.+..+ ..+..+++|++|++++|++++..+..
T Consensus 88 n~i~-----~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~----------------- 145 (306)
T 2z66_A 88 NGVI-----TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI----------------- 145 (306)
T ss_dssp CSEE-----EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTT-----------------
T ss_pred Cccc-----cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhh-----------------
Confidence 9887 355666666677777777766665544 45666666666666666666554444
Q ss_pred CcccccccccCCcCCcEEEccCccccc-cCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCcc
Q 002149 239 GFTGTIDVLGNMDQLRTLWLHGNHFSG-TIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKS 317 (959)
Q Consensus 239 ~l~~~~~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~ 317 (959)
+.++++|++|+|++|.+++ .+|..+..+++|++|+|++|++++..|..+..
T Consensus 146 --------~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-------------------- 197 (306)
T 2z66_A 146 --------FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS-------------------- 197 (306)
T ss_dssp --------TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT--------------------
T ss_pred --------cccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcC--------------------
Confidence 3445666666666666664 45666666666666666666666554444433
Q ss_pred cccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCC
Q 002149 318 KAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLS 397 (959)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p 397 (959)
+++|+.|+|++|++++..+
T Consensus 198 -------------------------------------------------------------l~~L~~L~L~~N~l~~~~~ 216 (306)
T 2z66_A 198 -------------------------------------------------------------LSSLQVLNMSHNNFFSLDT 216 (306)
T ss_dssp -------------------------------------------------------------CTTCCEEECTTSCCSBCCS
T ss_pred -------------------------------------------------------------CCCCCEEECCCCccCccCh
Confidence 3556666666666665555
Q ss_pred ccccCcCcCCEEeCcccccccccCCCccCCC-CCCeEeCCCCccCCC
Q 002149 398 PSVGNLDSLTQIKLQSNNISGQIPTNWTNLK-SLTLLDLSQNNLSPP 443 (959)
Q Consensus 398 ~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~-~L~~L~Ls~N~l~~~ 443 (959)
..+..+++|++|+|++|++++..|..+..++ +|+.|+|++|++++.
T Consensus 217 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 217 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp GGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred hhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 5666777777777777777777777777763 777777777777654
No 290
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=5.3e-29 Score=286.99 Aligned_cols=258 Identities=24% Similarity=0.338 Sum_probs=165.6
Q ss_pred CCCCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCC
Q 002149 64 DPCGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIP 142 (959)
Q Consensus 64 ~~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~ 142 (959)
..||..| .|.. ....++..+.+++ .+|..+. ++|+.|+|++|+|++..+ .|.++++|++|+|++|+|+.++
T Consensus 33 ~~Cp~~C----~C~~-~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~ 104 (440)
T 3zyj_A 33 QTCPSVC----SCSN-QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIE 104 (440)
T ss_dssp CCCCSSS----EECT-TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEEC
T ss_pred ccCCCCC----EeCC-CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccC
Confidence 4576544 4542 2235667777777 6777665 689999999999998887 6999999999999999999999
Q ss_pred hhhhcCCCCCcEEEccCcccCCCCCCCCCc-cccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcc
Q 002149 143 ADFFDGLENLQVLALDSNNFNASKGWSFPK-GLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPES 221 (959)
Q Consensus 143 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~-~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 221 (959)
+..|.++++|++|+|++|+|+. +|. .+..+++|+.|++++|++....+..|..+++|+.|+|++|+..+.++..
T Consensus 105 ~~~~~~l~~L~~L~L~~n~l~~-----~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~ 179 (440)
T 3zyj_A 105 IGAFNGLANLNTLELFDNRLTT-----IPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 179 (440)
T ss_dssp GGGGTTCSSCCEEECCSSCCSS-----CCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTT
T ss_pred hhhccCCccCCEEECCCCcCCe-----eCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcc
Confidence 9999999999999999998874 222 3445555555555555555444444455555555555543222222211
Q ss_pred cccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccccCC
Q 002149 222 FKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLD 301 (959)
Q Consensus 222 ~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~ 301 (959)
.|.++++|++|+|++|+++ .+| .+..+++|++|+|++|+|++..|..|
T Consensus 180 ------------------------~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~------ 227 (440)
T 3zyj_A 180 ------------------------AFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSF------ 227 (440)
T ss_dssp ------------------------TTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTT------
T ss_pred ------------------------hhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhh------
Confidence 0233444444444444444 233 23344444444444444443333222
Q ss_pred eEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCc
Q 002149 302 HLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSK 381 (959)
Q Consensus 302 ~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 381 (959)
..+++
T Consensus 228 ---------------------------------------------------------------------------~~l~~ 232 (440)
T 3zyj_A 228 ---------------------------------------------------------------------------QGLMH 232 (440)
T ss_dssp ---------------------------------------------------------------------------TTCTT
T ss_pred ---------------------------------------------------------------------------ccCcc
Confidence 23466
Q ss_pred ccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccC
Q 002149 382 LTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLS 441 (959)
Q Consensus 382 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~ 441 (959)
|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++.
T Consensus 233 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 233 LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 777777777777777777777888888888888887666666777788888888777764
No 291
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=5.8e-30 Score=286.13 Aligned_cols=287 Identities=18% Similarity=0.280 Sum_probs=229.9
Q ss_pred CCCCCCCCCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCC
Q 002149 59 WPKSGDPCGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNN 137 (959)
Q Consensus 59 w~~~~~~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~ 137 (959)
|.....+|+ |.++ | ++++++++ .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|+
T Consensus 23 ~~~~~~~C~---~~~~-c--------~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 23 SNQASLSCD---RNGI-C--------KGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp ----CCEEC---TTSE-E--------ECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCccCCCCC---CCeE-e--------eCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 444456666 6554 4 34566666 5676665 489999999999998887 69999999999999999
Q ss_pred CCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCcc-ccCccccCeecccccccCCCCC-hhhcCCCCCCEEEecCCc-C
Q 002149 138 FDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKG-LQSSAQLTNLSCMSCNLAGQLP-DFLGNFASLQNLKLSGNN-L 214 (959)
Q Consensus 138 l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~-l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~-l 214 (959)
|+.+++..|.++++|++|+|++|+++. +|.. +..+++|++|++++|++.+..+ ..+..+++|++|++++|+ +
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~-----~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~ 162 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSN-----LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTF 162 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSS-----CCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSC
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCc-----CCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccc
Confidence 999999889999999999999999984 5554 7889999999999999996544 578999999999999994 6
Q ss_pred CCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccc
Q 002149 215 TGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPS 294 (959)
Q Consensus 215 ~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 294 (959)
+...+.. +.++++|++|+|++|++++..|..|..+++|++|+|++|+++...+..
T Consensus 163 ~~~~~~~-------------------------~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 217 (353)
T 2z80_A 163 TKIQRKD-------------------------FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIF 217 (353)
T ss_dssp CEECTTT-------------------------TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHH
T ss_pred cccCHHH-------------------------ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhh
Confidence 6544444 566789999999999999888999999999999999999997655444
Q ss_pred cccc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccc
Q 002149 295 LASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLG 373 (959)
Q Consensus 295 ~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 373 (959)
+..+ +|+.|+|++|.+++..+....
T Consensus 218 ~~~~~~L~~L~L~~n~l~~~~~~~l~------------------------------------------------------ 243 (353)
T 2z80_A 218 VDVTSSVECLELRDTDLDTFHFSELS------------------------------------------------------ 243 (353)
T ss_dssp HHHTTTEEEEEEESCBCTTCCCC---------------------------------------------------------
T ss_pred hhhcccccEEECCCCccccccccccc------------------------------------------------------
Confidence 4444 699999999999864432100
Q ss_pred cccCCCCcccEEECCCCcccc----cCCccccCcCcCCEEeCcccccccccCCC-ccCCCCCCeEeCCCCccCCCCCC
Q 002149 374 LSCGTNSKLTVLNLPNFNLSG----TLSPSVGNLDSLTQIKLQSNNISGQIPTN-WTNLKSLTLLDLSQNNLSPPLPK 446 (959)
Q Consensus 374 ~~~~~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~ 446 (959)
.......++.++|++|.+++ .+|..+.++++|++|+|++|+|+ .+|.. |.++++|+.|+|++|++++..|.
T Consensus 244 -~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 244 -TGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp ----CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred -cccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 00123568888888888876 47888999999999999999999 67766 58999999999999999988773
No 292
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=3.4e-28 Score=280.27 Aligned_cols=314 Identities=15% Similarity=0.149 Sum_probs=228.3
Q ss_pred CCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 78 NSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 78 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
..+++.|+++++++++. | .+..+++|++|+|++|+|++.+ ++++++|++|+|++|+|++++ |.++++|++|+|
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~~--~~~l~~L~~L~Ls~N~l~~~~---~~~l~~L~~L~L 113 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTLD--LSQNTNLTYLACDSNKLTNLD---VTPLTKLTYLNC 113 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEEC
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeEc--cccCCCCCEEECcCCCCceee---cCCCCcCCEEEC
Confidence 35789999999999964 4 7899999999999999999863 889999999999999999985 889999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccC-CcccccccccC
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGL-NLVNLWLNDQK 236 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~L~~~~~~ 236 (959)
++|++++ +| +..+++|++|++++|++++. + ++.+++|++|++++|+..+.++ +..+ ++..|.+.++.
T Consensus 114 ~~N~l~~-----l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ls~n~ 181 (457)
T 3bz5_A 114 DTNKLTK-----LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNK 181 (457)
T ss_dssp CSSCCSC-----CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC--CTTCTTCCEEECCSSC
T ss_pred CCCcCCe-----ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccc--cccCCcCCEEECCCCc
Confidence 9999985 33 78899999999999999974 3 7889999999999996555552 4433 45666666655
Q ss_pred CCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCC
Q 002149 237 GGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVP 315 (959)
Q Consensus 237 ~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip 315 (959)
...++ +..+++|+.|++++|++++. .+..+++|++|+|++|++++. | +..+ +|+.|++++|++++..+
T Consensus 182 l~~l~-----l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~~~~~ 250 (457)
T 3bz5_A 182 ITELD-----VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLTELDV 250 (457)
T ss_dssp CCCCC-----CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCCC
T ss_pred cceec-----cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCCCcCH
Confidence 44432 77888999999999999864 388889999999999999984 4 5555 59999999999987533
Q ss_pred cccc--cccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCccc
Q 002149 316 KSKA--YKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLS 393 (959)
Q Consensus 316 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~ 393 (959)
.... ..+.++.|.+. .....++. ......++.+++|+.|+|++|.+.
T Consensus 251 ~~l~~L~~L~l~~n~L~-----------------------------~L~l~~n~--~~~~~~~~~l~~L~~L~Ls~n~~l 299 (457)
T 3bz5_A 251 STLSKLTTLHCIQTDLL-----------------------------EIDLTHNT--QLIYFQAEGCRKIKELDVTHNTQL 299 (457)
T ss_dssp TTCTTCCEEECTTCCCS-----------------------------CCCCTTCT--TCCEEECTTCTTCCCCCCTTCTTC
T ss_pred HHCCCCCEEeccCCCCC-----------------------------EEECCCCc--cCCcccccccccCCEEECCCCccc
Confidence 2211 00111111111 11111111 111123456678888888888877
Q ss_pred ccCCc--------cccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCCCCCCcceecccCCC
Q 002149 394 GTLSP--------SVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLPKFSGAVKLSLDGNP 459 (959)
Q Consensus 394 ~~~p~--------~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~l~~N~ 459 (959)
+.+|. .++++++|++|+|++|+|++ ++ +.++++|+.|++++|+|++ +| .+..+.+..|.
T Consensus 300 ~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~-l~---~L~~L~l~~n~ 366 (457)
T 3bz5_A 300 YLLDCQAAGITELDLSQNPKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD-FS---SVGKIPALNNN 366 (457)
T ss_dssp CEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB-CT---TGGGSSGGGTS
T ss_pred ceeccCCCcceEechhhcccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC-cc---ccccccccCCc
Confidence 66654 25566788888888888887 33 8888888888888888887 33 33344444443
No 293
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=3.1e-28 Score=271.57 Aligned_cols=280 Identities=22% Similarity=0.316 Sum_probs=235.0
Q ss_pred CCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 78 NSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 78 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
..+++.|+++++.+++ +++ +..+++|++|+|++|.++.. +.|.++++|++|+|++|+++.+++ +..+++|++|++
T Consensus 65 ~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~~-~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l 139 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITDI-SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNL 139 (347)
T ss_dssp CTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEEC
T ss_pred cCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccCc-hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEEC
Confidence 4589999999999985 454 99999999999999999874 579999999999999999999887 899999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccC-CcccccccccC
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGL-NLVNLWLNDQK 236 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~L~~~~~~ 236 (959)
++|.... .+..+..+++|+.|++++|.+.+..+ +..+++|+.|++++|++++..+ +..+ ++..|.+.++.
T Consensus 140 ~~n~~~~-----~~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~ 210 (347)
T 4fmz_A 140 GANHNLS-----DLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQ 210 (347)
T ss_dssp TTCTTCC-----CCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred CCCCCcc-----cccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCC
Confidence 9996553 34458999999999999999986544 8899999999999999986544 4444 56666666655
Q ss_pred CCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCC
Q 002149 237 GGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVP 315 (959)
Q Consensus 237 ~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip 315 (959)
...+.. +..+++|++|+|++|++++..+ +..+++|++|+|++|.+++. ..+..+ +|+.|++++|.+++. |
T Consensus 211 l~~~~~----~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~ 281 (347)
T 4fmz_A 211 ITDITP----VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-S 281 (347)
T ss_dssp CCCCGG----GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-G
T ss_pred CCCCch----hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-h
Confidence 444433 7889999999999999995444 89999999999999999975 345555 699999999999752 1
Q ss_pred cccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCccccc
Q 002149 316 KSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGT 395 (959)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 395 (959)
. +..+++|+.|+|++|++.+.
T Consensus 282 ~-----------------------------------------------------------~~~l~~L~~L~L~~n~l~~~ 302 (347)
T 4fmz_A 282 V-----------------------------------------------------------LNNLSQLNSLFLNNNQLGNE 302 (347)
T ss_dssp G-----------------------------------------------------------GGGCTTCSEEECCSSCCCGG
T ss_pred h-----------------------------------------------------------hcCCCCCCEEECcCCcCCCc
Confidence 1 22458899999999999999
Q ss_pred CCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccC
Q 002149 396 LSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLS 441 (959)
Q Consensus 396 ~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~ 441 (959)
.|..++++++|++|+|++|.+++..| +..+++|+.|++++|+++
T Consensus 303 ~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 303 DMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999999999999999999997666 899999999999999986
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=4.7e-28 Score=268.19 Aligned_cols=265 Identities=22% Similarity=0.300 Sum_probs=223.4
Q ss_pred CCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCe
Q 002149 103 SKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTN 182 (959)
Q Consensus 103 ~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~ 182 (959)
.+|+.+++++|.++..+..+. ++|++|+|++|+|+.+++..|.++++|++|+|++|+++. ..|..+..+++|++
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~ 106 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK----IHEKAFSPLRKLQK 106 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE----ECGGGSTTCTTCCE
T ss_pred ccCCEEECCCCCccccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCc----cCHhHhhCcCCCCE
Confidence 368999999999997766664 689999999999999999899999999999999999985 34778899999999
Q ss_pred ecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcc
Q 002149 183 LSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNH 262 (959)
Q Consensus 183 L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~ 262 (959)
|++++|++. .+|..+. ++|++|++++|++++..+.. +.++++|++|+|++|.
T Consensus 107 L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~-------------------------~~~l~~L~~L~l~~n~ 158 (332)
T 2ft3_A 107 LYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGV-------------------------FSGLRNMNCIEMGGNP 158 (332)
T ss_dssp EECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGG-------------------------GSSCSSCCEEECCSCC
T ss_pred EECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhH-------------------------hCCCccCCEEECCCCc
Confidence 999999998 4555544 89999999999999665554 5677999999999999
Q ss_pred cc--ccCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCch
Q 002149 263 FS--GTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAP 340 (959)
Q Consensus 263 l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (959)
++ +..|..+..+ +|++|++++|++++. |..+. .+|+.|+|++|.+++..|.
T Consensus 159 l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l-~~~~~-~~L~~L~l~~n~i~~~~~~------------------------ 211 (332)
T 2ft3_A 159 LENSGFEPGAFDGL-KLNYLRISEAKLTGI-PKDLP-ETLNELHLDHNKIQAIELE------------------------ 211 (332)
T ss_dssp CBGGGSCTTSSCSC-CCSCCBCCSSBCSSC-CSSSC-SSCSCCBCCSSCCCCCCTT------------------------
T ss_pred cccCCCCcccccCC-ccCEEECcCCCCCcc-Ccccc-CCCCEEECCCCcCCccCHH------------------------
Confidence 96 4778888888 999999999999974 44333 4799999999999865442
Q ss_pred hhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCccccccccc
Q 002149 341 EVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQI 420 (959)
Q Consensus 341 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~ 420 (959)
.+..+++|+.|+|++|++.+..+..+..+++|++|+|++|+|+ .+
T Consensus 212 ----------------------------------~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 256 (332)
T 2ft3_A 212 ----------------------------------DLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RV 256 (332)
T ss_dssp ----------------------------------SSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BC
T ss_pred ----------------------------------HhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ec
Confidence 1335588999999999999888889999999999999999999 89
Q ss_pred CCCccCCCCCCeEeCCCCccCCCCCC----------CCCcceecccCCCCCCC
Q 002149 421 PTNWTNLKSLTLLDLSQNNLSPPLPK----------FSGAVKLSLDGNPLLNG 463 (959)
Q Consensus 421 p~~l~~l~~L~~L~Ls~N~l~~~~p~----------~~~~~~~~l~~N~~~c~ 463 (959)
|..+..+++|+.|+|++|++++..+. +..+..+.+.+||+.+.
T Consensus 257 p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~ 309 (332)
T 2ft3_A 257 PAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYW 309 (332)
T ss_dssp CTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGG
T ss_pred ChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccc
Confidence 99999999999999999999876543 23356788999998754
No 295
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=1.1e-27 Score=278.01 Aligned_cols=317 Identities=28% Similarity=0.370 Sum_probs=243.9
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEcc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALD 158 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 158 (959)
.+++.|++.+++++. +| .+..+++|++|+|++|.+++.++ |.++++|++|+|++|+++.+++ |.++++|++|+|+
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~ 120 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLF 120 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECC
Confidence 478999999999884 55 48899999999999999998877 9999999999999999999987 9999999999999
Q ss_pred CcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccC-CcccccccccCC
Q 002149 159 SNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGL-NLVNLWLNDQKG 237 (959)
Q Consensus 159 ~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~L~~~~~~~ 237 (959)
+|.++. ++. +..+++|++|++++|++.+. + .+..+++|+.|+++ |.+.+..+ +..+ +++.|.+.++..
T Consensus 121 ~n~l~~-----~~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 121 NNQITD-----IDP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKV 189 (466)
T ss_dssp SSCCCC-----CGG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred CCCCCC-----ChH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcC
Confidence 999985 343 88999999999999999864 3 58999999999997 56654433 5554 566777766655
Q ss_pred CCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCc
Q 002149 238 GGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPK 316 (959)
Q Consensus 238 ~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~ 316 (959)
..+. .+..+++|++|++++|.+++..| ++.+++|++|+|++|++++. + .+..+ +|+.|++++|.+++..|-
T Consensus 190 ~~~~----~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~~ 261 (466)
T 1o6v_A 190 SDIS----VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-G-TLASLTNLTDLDLANNQISNLAPL 261 (466)
T ss_dssp CCCG----GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCCCGGG
T ss_pred CCCh----hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc-h-hhhcCCCCCEEECCCCccccchhh
Confidence 4443 37888999999999999997665 77899999999999999864 3 45555 699999999999875431
Q ss_pred ccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccC
Q 002149 317 SKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTL 396 (959)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 396 (959)
.. ++.+.......+....... +..+++|+.|+|++|++.+..
T Consensus 262 ~~------------------------------------l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 303 (466)
T 1o6v_A 262 SG------------------------------------LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS 303 (466)
T ss_dssp TT------------------------------------CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCG
T ss_pred hc------------------------------------CCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCch
Confidence 10 0111111111111111111 456688999999999988654
Q ss_pred CccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCC--CCCCCcceecccCCCCC
Q 002149 397 SPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPL--PKFSGAVKLSLDGNPLL 461 (959)
Q Consensus 397 p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~--p~~~~~~~~~l~~N~~~ 461 (959)
+ ++.+++|+.|+|++|++++..| +..+++|+.|++++|++++.. ..+.++..+.+.+|++.
T Consensus 304 ~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~ 366 (466)
T 1o6v_A 304 P--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQIS 366 (466)
T ss_dssp G--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred h--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccC
Confidence 4 7888899999999999887665 788889999999999888752 23456677888888664
No 296
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=9.6e-28 Score=276.47 Aligned_cols=280 Identities=20% Similarity=0.194 Sum_probs=220.2
Q ss_pred cCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEE
Q 002149 77 SNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLA 156 (959)
Q Consensus 77 ~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 156 (959)
...+++.|++++|.+++. | ++.+++|++|+|++|.|++. .|.++++|++|+|++|+++.++ +..+++|++|+
T Consensus 62 ~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~--~~~~l~~L~~L~L~~N~l~~l~---~~~l~~L~~L~ 133 (457)
T 3bz5_A 62 KLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL--DVTPLTKLTYLNCDTNKLTKLD---VSQNPLLTYLN 133 (457)
T ss_dssp GCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC--CCTTCTTCCEEECCSSCCSCCC---CTTCTTCCEEE
T ss_pred ccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee--ecCCCCcCCEEECCCCcCCeec---CCCCCcCCEEE
Confidence 346899999999999974 4 99999999999999999986 3899999999999999999985 88999999999
Q ss_pred ccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccC-Cccccccccc
Q 002149 157 LDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGL-NLVNLWLNDQ 235 (959)
Q Consensus 157 Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~L~~~~~ 235 (959)
|++|++++ ++ +..+++|+.|++++|+..+.+ .+..+++|+.|++++|++++. | +..+ ++..|.+..+
T Consensus 134 l~~N~l~~-----l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N 201 (457)
T 3bz5_A 134 CARNTLTE-----ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTN 201 (457)
T ss_dssp CTTSCCSC-----CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSS
T ss_pred CCCCccce-----ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCC
Confidence 99999986 32 788999999999999777666 478899999999999999974 4 4444 5667777666
Q ss_pred CCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc--------cCCeEeCCC
Q 002149 236 KGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL--------SLDHLDLNN 307 (959)
Q Consensus 236 ~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--------~L~~L~L~~ 307 (959)
....+ .++.+++|++|+|++|++++ +| +..+++|++|+|++|++++.++..+..+ +|+.|++++
T Consensus 202 ~l~~~-----~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~ 273 (457)
T 3bz5_A 202 NITKL-----DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTH 273 (457)
T ss_dssp CCSCC-----CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTT
T ss_pred cCCee-----ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCC
Confidence 65554 27889999999999999997 66 8899999999999999999876665543 366777777
Q ss_pred CcCCCCCCccc---ccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccE
Q 002149 308 NMFMGPVPKSK---AYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTV 384 (959)
Q Consensus 308 N~l~~~ip~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~ 384 (959)
|.+.|.+|... ...+.+++|.+.+. +++ .......+.++.+++|+.
T Consensus 274 n~~~~~~~~~~l~~L~~L~Ls~n~~l~~---l~~----------------------------~~~~L~~L~l~~~~~L~~ 322 (457)
T 3bz5_A 274 NTQLIYFQAEGCRKIKELDVTHNTQLYL---LDC----------------------------QAAGITELDLSQNPKLVY 322 (457)
T ss_dssp CTTCCEEECTTCTTCCCCCCTTCTTCCE---EEC----------------------------TTCCCSCCCCTTCTTCCE
T ss_pred CccCCcccccccccCCEEECCCCcccce---ecc----------------------------CCCcceEechhhcccCCE
Confidence 77776665321 11122333322110 110 001122234566789999
Q ss_pred EECCCCcccccCCccccCcCcCCEEeCccccccc
Q 002149 385 LNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISG 418 (959)
Q Consensus 385 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g 418 (959)
|+|++|++++. + ++++++|+.|+|++|+|++
T Consensus 323 L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 323 LYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp EECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB
T ss_pred EECCCCccccc-c--cccCCcCcEEECCCCCCCC
Confidence 99999999984 3 9999999999999999996
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=1.1e-27 Score=265.13 Aligned_cols=266 Identities=21% Similarity=0.273 Sum_probs=227.4
Q ss_pred CCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCe
Q 002149 103 SKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTN 182 (959)
Q Consensus 103 ~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~ 182 (959)
.+|+.++++++.++..+..+. ++|++|+|++|+|+.+++..|.++++|++|+|++|+++. ..|..+..+++|++
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~ 104 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK----ISPGAFAPLVKLER 104 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCC----BCTTTTTTCTTCCE
T ss_pred CCCeEEEecCCCccccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCe----eCHHHhcCCCCCCE
Confidence 478999999999997766554 689999999999999999999999999999999999985 34778899999999
Q ss_pred ecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcc
Q 002149 183 LSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNH 262 (959)
Q Consensus 183 L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~ 262 (959)
|++++|+++ .+|..+. ++|++|++++|++++..+.. +.++++|++|+|++|.
T Consensus 105 L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~-------------------------~~~l~~L~~L~l~~n~ 156 (330)
T 1xku_A 105 LYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSV-------------------------FNGLNQMIVVELGTNP 156 (330)
T ss_dssp EECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHH-------------------------HTTCTTCCEEECCSSC
T ss_pred EECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhH-------------------------hcCCccccEEECCCCc
Confidence 999999998 4555544 79999999999998665554 5677999999999999
Q ss_pred cc--ccCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCch
Q 002149 263 FS--GTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAP 340 (959)
Q Consensus 263 l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (959)
++ +..+..|..+++|++|++++|+++.. |..+. .+|+.|+|++|.+++..|.
T Consensus 157 l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l-~~~~~-~~L~~L~l~~n~l~~~~~~------------------------ 210 (330)
T 1xku_A 157 LKSSGIENGAFQGMKKLSYIRIADTNITTI-PQGLP-PSLTELHLDGNKITKVDAA------------------------ 210 (330)
T ss_dssp CCGGGBCTTGGGGCTTCCEEECCSSCCCSC-CSSCC-TTCSEEECTTSCCCEECTG------------------------
T ss_pred CCccCcChhhccCCCCcCEEECCCCccccC-Ccccc-ccCCEEECCCCcCCccCHH------------------------
Confidence 96 37788999999999999999999965 43333 4799999999999865442
Q ss_pred hhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCccccccccc
Q 002149 341 EVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQI 420 (959)
Q Consensus 341 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~ 420 (959)
.++.+++|+.|+|++|++++..+..+..+++|++|+|++|+|+ .+
T Consensus 211 ----------------------------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 255 (330)
T 1xku_A 211 ----------------------------------SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KV 255 (330)
T ss_dssp ----------------------------------GGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SC
T ss_pred ----------------------------------HhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cC
Confidence 2345689999999999999988889999999999999999999 89
Q ss_pred CCCccCCCCCCeEeCCCCccCCCCCC-C---------CCcceecccCCCCCCC
Q 002149 421 PTNWTNLKSLTLLDLSQNNLSPPLPK-F---------SGAVKLSLDGNPLLNG 463 (959)
Q Consensus 421 p~~l~~l~~L~~L~Ls~N~l~~~~p~-~---------~~~~~~~l~~N~~~c~ 463 (959)
|..+..+++|++|+|++|++++..+. | ..+..+++.+||+.+.
T Consensus 256 p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~ 308 (330)
T 1xku_A 256 PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYW 308 (330)
T ss_dssp CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGG
T ss_pred ChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccccc
Confidence 99999999999999999999976553 2 3455788999998764
No 298
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=5.1e-28 Score=279.82 Aligned_cols=260 Identities=24% Similarity=0.302 Sum_probs=165.8
Q ss_pred CCCCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCC
Q 002149 64 DPCGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIP 142 (959)
Q Consensus 64 ~~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~ 142 (959)
..|+..| .|.. ....++..+.+++ .+|..+. ++|++|+|++|+|++..+ .|.++++|++|+|++|+|+.++
T Consensus 44 ~~Cp~~C----~C~~-~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~ 115 (452)
T 3zyi_A 44 QNCPSVC----SCSN-QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIE 115 (452)
T ss_dssp CCCCTTS----EECS-SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCCCCC----EECC-CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcC
Confidence 4566544 3432 2234566666666 5666554 689999999999998877 6999999999999999999999
Q ss_pred hhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCccc
Q 002149 143 ADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESF 222 (959)
Q Consensus 143 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 222 (959)
+..|.++++|++|+|++|+|+.+ .+..+..+++|++|+|++|++....+..|.++++|+.|+|++|+..+.++..
T Consensus 116 ~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~- 190 (452)
T 3zyi_A 116 VGAFNGLASLNTLELFDNWLTVI----PSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEG- 190 (452)
T ss_dssp TTTTTTCTTCCEEECCSSCCSBC----CTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTT-
T ss_pred hhhccCcccCCEEECCCCcCCcc----ChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChh-
Confidence 99999999999999999988742 1222444555555555555555444444555555555555543222222211
Q ss_pred ccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCe
Q 002149 223 KGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDH 302 (959)
Q Consensus 223 ~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~ 302 (959)
.+.++++|++|+|++|++++ +| .+..+++|++|+|++|+|++..|..|
T Consensus 191 -----------------------~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~------- 238 (452)
T 3zyi_A 191 -----------------------AFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSF------- 238 (452)
T ss_dssp -----------------------TTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGG-------
T ss_pred -----------------------hccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccc-------
Confidence 03334445555555555442 22 23444444444444444444333332
Q ss_pred EeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcc
Q 002149 303 LDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKL 382 (959)
Q Consensus 303 L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L 382 (959)
..+++|
T Consensus 239 --------------------------------------------------------------------------~~l~~L 244 (452)
T 3zyi_A 239 --------------------------------------------------------------------------HGLSSL 244 (452)
T ss_dssp --------------------------------------------------------------------------TTCTTC
T ss_pred --------------------------------------------------------------------------cCccCC
Confidence 234667
Q ss_pred cEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCC
Q 002149 383 TVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSP 442 (959)
Q Consensus 383 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~ 442 (959)
+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++.-
T Consensus 245 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 245 KKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 777777777777777777888888888888888886666667778888888888887653
No 299
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4.5e-28 Score=262.18 Aligned_cols=209 Identities=27% Similarity=0.372 Sum_probs=166.2
Q ss_pred cceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCC
Q 002149 72 KHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLE 150 (959)
Q Consensus 72 ~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 150 (959)
.++.|.....+.+++.+++++ .+|..+ .++|++|+|++|.|++.++ .|.++++|++|+|++|+|+.+++..|.+++
T Consensus 4 ~~C~C~~~~~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 80 (285)
T 1ozn_A 4 GACVCYNEPKVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA 80 (285)
T ss_dssp TTCEEECSSSCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CCceECCCCCeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCcc
Confidence 355677666577889998888 566654 4689999999999999887 589999999999999999999888899999
Q ss_pred CCcEEEccCcc-cCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCccc
Q 002149 151 NLQVLALDSNN-FNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVN 229 (959)
Q Consensus 151 ~L~~L~Ls~N~-l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~ 229 (959)
+|++|+|++|+ +.. ..|..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+..
T Consensus 81 ~L~~L~l~~n~~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-------- 148 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRS----VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT-------- 148 (285)
T ss_dssp TCCEEECCSCTTCCC----CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT--------
T ss_pred CCCEEeCCCCCCccc----cCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhH--------
Confidence 99999999997 764 23566777888888888888888777778888888888888888887655544
Q ss_pred ccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCC
Q 002149 230 LWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNN 308 (959)
Q Consensus 230 L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N 308 (959)
+.++++|++|+|++|++++..+..|..+++|++|+|++|++++..|..+..+ +|+.|+|++|
T Consensus 149 -----------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 149 -----------------FRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp -----------------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred -----------------hccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 4556788888888888886666677888888888888888887777777665 4777777777
Q ss_pred cCCC
Q 002149 309 MFMG 312 (959)
Q Consensus 309 ~l~~ 312 (959)
.+++
T Consensus 212 ~l~~ 215 (285)
T 1ozn_A 212 NLSA 215 (285)
T ss_dssp CCSC
T ss_pred cCCc
Confidence 7664
No 300
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=5.5e-27 Score=269.91 Aligned_cols=218 Identities=22% Similarity=0.347 Sum_probs=141.8
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEcc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALD 158 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 158 (959)
.+++.|++++|.+++ +|.. +++|++|++++|++++.+. + .++|++|+|++|+++++| .|.++++|++|+++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~-~--~~~L~~L~L~~n~l~~lp--~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSD-L--PPLLEYLGVSNNQLEKLP--ELQNSSFLKIIDVD 161 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCS-C--CTTCCEEECCSSCCSSCC--CCTTCTTCCEEECC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccC-C--CCCCCEEECcCCCCCCCc--ccCCCCCCCEEECC
Confidence 357777777777775 5543 3677777777777775432 1 157888888888888776 37788888888888
Q ss_pred CcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCC
Q 002149 159 SNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGG 238 (959)
Q Consensus 159 ~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~ 238 (959)
+|++++ +|..+ .+|++|++++|++.+ +| .++++++|+.|++++|++++ +|.... +++.|.+.++...
T Consensus 162 ~N~l~~-----lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~~--~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 162 NNSLKK-----LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLPL--SLESIVAGNNILE 228 (454)
T ss_dssp SSCCSC-----CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCCT--TCCEEECCSSCCS
T ss_pred CCcCcc-----cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCcC--cccEEECcCCcCC
Confidence 887774 34332 477888888888776 45 57778888888888888875 343322 4555555555444
Q ss_pred CcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCC--CCCc
Q 002149 239 GFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMG--PVPK 316 (959)
Q Consensus 239 ~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~--~ip~ 316 (959)
.++ .++.+++|++|++++|++++ +|.. +++|++|++++|++++ +|..+ .+|+.|++++|++++ .+|.
T Consensus 229 ~lp----~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~~--~~L~~L~ls~N~l~~l~~~~~ 297 (454)
T 1jl5_A 229 ELP----ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPELP--QSLTFLDVSENIFSGLSELPP 297 (454)
T ss_dssp SCC----CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCSEESCCCT
T ss_pred ccc----ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCccc--CcCCEEECcCCccCcccCcCC
Confidence 333 26677778888888888774 4542 3677888888887776 33332 357778888887776 3432
Q ss_pred ccccccccccCccc
Q 002149 317 SKAYKYSYSSNAFC 330 (959)
Q Consensus 317 ~~~~~~~~~~~~~~ 330 (959)
....+.+++|.+.
T Consensus 298 -~L~~L~l~~N~l~ 310 (454)
T 1jl5_A 298 -NLYYLNASSNEIR 310 (454)
T ss_dssp -TCCEEECCSSCCS
T ss_pred -cCCEEECcCCcCC
Confidence 1223344555443
No 301
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.95 E-value=1.5e-27 Score=288.97 Aligned_cols=346 Identities=19% Similarity=0.125 Sum_probs=226.7
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.|+|++|+|++..+.+|.+|++|++|+|++|+|++.++ .|.++++|++|+|++|+|+.+++..|+++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 479999999999998777889999999999999999999887 5999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCC----CEEEecCCcCC------------------
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASL----QNLKLSGNNLT------------------ 215 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L----~~L~Ls~N~l~------------------ 215 (959)
++|+++.. .+|..+..+++|++|++++|++++..+..|..+.++ ..++++.|.++
T Consensus 156 s~N~l~~~---~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~ 232 (635)
T 4g8a_A 156 AHNLIQSF---KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLR 232 (635)
T ss_dssp CSSCCCCC---CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEE
T ss_pred ccCccccC---CCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhh
Confidence 99999754 467888999999999999999987766655433222 13333333332
Q ss_pred --------------------------------------------------------------------------------
Q 002149 216 -------------------------------------------------------------------------------- 215 (959)
Q Consensus 216 -------------------------------------------------------------------------------- 215 (959)
T Consensus 233 ~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~ 312 (635)
T 4g8a_A 233 NNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFS 312 (635)
T ss_dssp SCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEE
T ss_pred cccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccc
Confidence
Q ss_pred -----------------------------CCCCcccccC--------------------CcccccccccCCCCccccccc
Q 002149 216 -----------------------------GPIPESFKGL--------------------NLVNLWLNDQKGGGFTGTIDV 246 (959)
Q Consensus 216 -----------------------------~~~p~~~~~l--------------------~l~~L~~~~~~~~~l~~~~~~ 246 (959)
...+..+..+ +++.|.+..+...........
T Consensus 313 ~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~ 392 (635)
T 4g8a_A 313 LVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQS 392 (635)
T ss_dssp EESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHH
T ss_pred ccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccc
Confidence 1111100000 011111111111111111112
Q ss_pred ccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCc-cccccc-cCCeEeCCCCcCCCCCCcccc-----
Q 002149 247 LGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIP-PSLASL-SLDHLDLNNNMFMGPVPKSKA----- 319 (959)
Q Consensus 247 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~~-~L~~L~L~~N~l~~~ip~~~~----- 319 (959)
+..+.+|+.|+++.|.+. .++..+..+++|+.++++.|++....+ ..+..+ +++.++++.|.+.+..|....
T Consensus 393 ~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L 471 (635)
T 4g8a_A 393 DFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 471 (635)
T ss_dssp HHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC
T ss_pred hhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhh
Confidence 334455566666555554 233444555555555555554443332 223333 355555555555544433211
Q ss_pred cccccccCcccC-CCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCc
Q 002149 320 YKYSYSSNAFCQ-PTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSP 398 (959)
Q Consensus 320 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~ 398 (959)
..+.+++|.+.. ..+ ..+..++.+......++......+..++.+++|+.|+|++|+|++..|.
T Consensus 472 ~~L~Ls~N~~~~~~~~---------------~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~ 536 (635)
T 4g8a_A 472 EVLKMAGNSFQENFLP---------------DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF 536 (635)
T ss_dssp CEEECTTCEEGGGEEC---------------SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCG
T ss_pred hhhhhhhcccccccCc---------------hhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChh
Confidence 111222222211 000 0111222333333344444445555677889999999999999999999
Q ss_pred cccCcCcCCEEeCcccccccccCCCccCC-CCCCeEeCCCCccCCC
Q 002149 399 SVGNLDSLTQIKLQSNNISGQIPTNWTNL-KSLTLLDLSQNNLSPP 443 (959)
Q Consensus 399 ~~~~l~~L~~L~L~~N~l~g~~p~~l~~l-~~L~~L~Ls~N~l~~~ 443 (959)
.|.++++|++|+|++|+|++..|..|..+ ++|+.|+|++|+++..
T Consensus 537 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 537 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp GGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred HHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 99999999999999999999999999998 6899999999999753
No 302
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=1.9e-27 Score=273.72 Aligned_cols=327 Identities=18% Similarity=0.188 Sum_probs=169.9
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCc-------------cEEecCCCCCCCCChh
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNL-------------KYAYLDGNNFDTIPAD 144 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L-------------~~L~L~~N~l~~i~~~ 144 (959)
.++++++++++++ |.+|+++++|++|++|+|++|.+.+..| .++++++| ++|++++|+++++|..
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~ 89 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPEL 89 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCC
Confidence 3555666666666 5666666666666666666666655444 35544432 4555555555444431
Q ss_pred h----------------hcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEE
Q 002149 145 F----------------FDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLK 208 (959)
Q Consensus 145 ~----------------~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 208 (959)
. -..+++|++|+|++|+++++ |.. .++|++|++++|++++ +| .|+++++|++|+
T Consensus 90 ~~~L~~L~l~~n~l~~lp~~~~~L~~L~l~~n~l~~l-----~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 90 PPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKAL-----SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp CTTCSEEECCSSCCSSCCCCCTTCCEEECCSSCCSCC-----CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCccccccCCCcEEECCCCccCcc-----cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 0 00124555555555555432 111 1577778888777775 56 477778888888
Q ss_pred ecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCC
Q 002149 209 LSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFV 288 (959)
Q Consensus 209 Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 288 (959)
+++|++++ +|..+. +++.|.+.++....++ .++++++|++|++++|++++ +|... ++|++|++++|+++
T Consensus 160 l~~N~l~~-lp~~~~--~L~~L~L~~n~l~~l~----~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 160 VDNNSLKK-LPDLPP--SLEFIAAGNNQLEELP----ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE 228 (454)
T ss_dssp CCSSCCSC-CCCCCT--TCCEEECCSSCCSSCC----CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS
T ss_pred CCCCcCcc-cCCCcc--cccEEECcCCcCCcCc----cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC
Confidence 88888775 454433 4555555555444432 36777778888888887774 44332 47777777777777
Q ss_pred CCCccccccc-cCCeEeCCCCcCCCCCCcc--cccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCC
Q 002149 289 GLIPPSLASL-SLDHLDLNNNMFMGPVPKS--KAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGN 365 (959)
Q Consensus 289 ~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 365 (959)
.+|. +..+ +|+.|++++|++++ +|.. ....+.+++|.+.+.+... +.+.......
T Consensus 229 -~lp~-~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~l~~~~-------------------~~L~~L~ls~ 286 (454)
T 1jl5_A 229 -ELPE-LQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTDLPELP-------------------QSLTFLDVSE 286 (454)
T ss_dssp -SCCC-CTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSCCCCCC-------------------TTCCEEECCS
T ss_pred -cccc-cCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccccCccc-------------------CcCCEEECcC
Confidence 4453 5555 57778888777775 3332 1223345555554432211 1111111111
Q ss_pred CCCCcccccccCCCCcccEEECCCCcccccCCccccCc-CcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCC
Q 002149 366 DPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNL-DSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPL 444 (959)
Q Consensus 366 ~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~ 444 (959)
+...... ...++|+.|+|++|++.+. + .+ ++|++|+|++|++++ +|.. +++|+.|++++|++++.+
T Consensus 287 N~l~~l~----~~~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~lp 353 (454)
T 1jl5_A 287 NIFSGLS----ELPPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAEVP 353 (454)
T ss_dssp SCCSEES----CCCTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCC
T ss_pred CccCccc----CcCCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccccc
Confidence 1111110 0124677777777776642 2 22 467777777777774 5544 467777777777777533
Q ss_pred CCCCCcceecccCCCCCC
Q 002149 445 PKFSGAVKLSLDGNPLLN 462 (959)
Q Consensus 445 p~~~~~~~~~l~~N~~~c 462 (959)
+.+.++..+++.+|++.+
T Consensus 354 ~~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 354 ELPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CCCTTCCEEECCSSCCSS
T ss_pred chhhhccEEECCCCCCCc
Confidence 334456677777776654
No 303
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.6e-27 Score=280.70 Aligned_cols=285 Identities=22% Similarity=0.311 Sum_probs=221.1
Q ss_pred CCCCCCCCCCCC-----CCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEE
Q 002149 57 LQWPKSGDPCGP-----PCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYA 131 (959)
Q Consensus 57 ~~w~~~~~~C~~-----~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L 131 (959)
..|....++|.. .|+....|...+++.|++++++++ .+|..+. ++|++|+|++|+|+.+++ .+++|++|
T Consensus 13 ~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~---~l~~L~~L 86 (622)
T 3g06_A 13 SAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA---LPPELRTL 86 (622)
T ss_dssp HHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC---CCTTCCEE
T ss_pred HHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC---cCCCCCEE
Confidence 346544555540 122335566667999999999999 8888776 899999999999997665 67899999
Q ss_pred ecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecC
Q 002149 132 YLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSG 211 (959)
Q Consensus 132 ~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~ 211 (959)
+|++|+|+.+|. .+++|++|+|++|+|+. +|. .+++|+.|++++|++++ +|.. +++|++|+|++
T Consensus 87 ~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~-----l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~ 150 (622)
T 3g06_A 87 EVSGNQLTSLPV----LPPGLLELSIFSNPLTH-----LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSD 150 (622)
T ss_dssp EECSCCCSCCCC----CCTTCCEEEECSCCCCC-----CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCS
T ss_pred EcCCCcCCcCCC----CCCCCCEEECcCCcCCC-----CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcC
Confidence 999999999987 68999999999999985 555 56889999999999986 5543 48999999999
Q ss_pred CcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCC
Q 002149 212 NNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLI 291 (959)
Q Consensus 212 N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 291 (959)
|++++ +|..+. ++..|.+.++....++ ..+++|+.|+|++|+|++ +|.. +++|+.|++++|.|+..
T Consensus 151 N~l~~-l~~~~~--~L~~L~L~~N~l~~l~------~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l- 216 (622)
T 3g06_A 151 NQLAS-LPALPS--ELCKLWAYNNQLTSLP------MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL- 216 (622)
T ss_dssp SCCSC-CCCCCT--TCCEEECCSSCCSCCC------CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-
T ss_pred CcCCC-cCCccC--CCCEEECCCCCCCCCc------ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc-
Confidence 99995 444332 3455555555554443 345778888888888874 5543 46788888888888853
Q ss_pred ccccccccCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcc
Q 002149 292 PPSLASLSLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSW 371 (959)
Q Consensus 292 p~~~~~~~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 371 (959)
|..+ .+|+.|+|++|.+++ +|.
T Consensus 217 ~~~~--~~L~~L~Ls~N~L~~-lp~------------------------------------------------------- 238 (622)
T 3g06_A 217 PALP--SGLKELIVSGNRLTS-LPV------------------------------------------------------- 238 (622)
T ss_dssp CCCC--TTCCEEECCSSCCSC-CCC-------------------------------------------------------
T ss_pred CCCC--CCCCEEEccCCccCc-CCC-------------------------------------------------------
Confidence 3322 358888888888875 331
Q ss_pred cccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCCC
Q 002149 372 LGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLPK 446 (959)
Q Consensus 372 ~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 446 (959)
.+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|++|++++.+|.
T Consensus 239 ------~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 239 ------LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp ------CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred ------CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 2378999999999999 5665 6789999999999999 8899999999999999999999987764
No 304
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=8.7e-27 Score=256.83 Aligned_cols=65 Identities=23% Similarity=0.328 Sum_probs=57.3
Q ss_pred CCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCCh
Q 002149 78 NSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPA 143 (959)
Q Consensus 78 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~ 143 (959)
..+++.|+|++|.++ .+|..++++++|++|+|++|.|+..++.|.++++|++|+|++|++.+..+
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p 167 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELP 167 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCC
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccC
Confidence 458999999999999 89999999999999999999999665589999999999999977665433
No 305
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1e-28 Score=270.70 Aligned_cols=249 Identities=22% Similarity=0.248 Sum_probs=189.7
Q ss_pred ccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCC--CChhhhc-------CCCCCcEEEccCcccCCCCCCC
Q 002149 99 LNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDT--IPADFFD-------GLENLQVLALDSNNFNASKGWS 169 (959)
Q Consensus 99 l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~--i~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~ 169 (959)
++.+++|++|++++|.+ ..+..+... |++|+|++|+++. ++.. +. ++++|++|+|++|++++ .
T Consensus 39 ~~~~~~L~~l~l~~n~l-~~p~~~~~~--L~~L~L~~n~l~~~~~~~~-~~~~~~~~~~l~~L~~L~L~~n~l~~----~ 110 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE-ADLGQFTDI--IKSLSLKRLTVRAARIPSR-ILFGALRVLGISGLQELTLENLEVTG----T 110 (312)
T ss_dssp EEEEEECTTHHHHCCTT-CCCHHHHHH--HHHCCCCEEEEEEEECBHH-HHHHHHHHHTTSCCCEEEEEEEBCBS----C
T ss_pred EccCCCceeEeeccccc-ccHHHHHHH--HhhcccccccccCCCcCHH-HHHHHHHhcCcCCccEEEccCCcccc----h
Confidence 45667788888888888 333344433 8888888888854 3332 22 68888888888888876 4
Q ss_pred CCccc--cCccccCeecccccccCCCCChhhcCC-----CCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCccc
Q 002149 170 FPKGL--QSSAQLTNLSCMSCNLAGQLPDFLGNF-----ASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTG 242 (959)
Q Consensus 170 lp~~l--~~l~~L~~L~l~~n~l~~~~p~~l~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~ 242 (959)
+|..+ ..+++|++|++++|++++. |..+..+ ++|++|+|++|++++..|..
T Consensus 111 ~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~--------------------- 168 (312)
T 1wwl_A 111 APPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQ--------------------- 168 (312)
T ss_dssp CCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTT---------------------
T ss_pred hHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHH---------------------
Confidence 56665 7888888888888888877 7777776 89999999999998777666
Q ss_pred ccccccCCcCCcEEEccCcccccc--Cchhh--cCCCCCCEEeCCCCcCCCCC--c-cccccc-cCCeEeCCCCcCCCCC
Q 002149 243 TIDVLGNMDQLRTLWLHGNHFSGT--IPESF--GKLTSLKDLNLNSNQFVGLI--P-PSLASL-SLDHLDLNNNMFMGPV 314 (959)
Q Consensus 243 ~~~~l~~l~~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~~~~--p-~~~~~~-~L~~L~L~~N~l~~~i 314 (959)
++++++|++|+|++|++.+. +|..+ ..+++|++|+|++|+|++.. + ..+..+ +|+.|+|++|++++.+
T Consensus 169 ----~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 169 ----VRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp ----CCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred ----hccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 45678899999999998765 34444 78899999999999998431 2 233344 6999999999998765
Q ss_pred CcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccc
Q 002149 315 PKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSG 394 (959)
Q Consensus 315 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~ 394 (959)
|.. .+..+++|+.|+|++|+|+
T Consensus 245 ~~~---------------------------------------------------------~~~~l~~L~~L~Ls~N~l~- 266 (312)
T 1wwl_A 245 GAP---------------------------------------------------------SCDWPSQLNSLNLSFTGLK- 266 (312)
T ss_dssp CCS---------------------------------------------------------CCCCCTTCCEEECTTSCCS-
T ss_pred chh---------------------------------------------------------hhhhcCCCCEEECCCCccC-
Confidence 421 1123478999999999998
Q ss_pred cCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCC
Q 002149 395 TLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPP 443 (959)
Q Consensus 395 ~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~ 443 (959)
.+|..+. ++|++|+|++|+|++. |. +..+++|+.|+|++|++++.
T Consensus 267 ~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 267 QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 7787776 8999999999999965 66 89999999999999999863
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=2.9e-26 Score=264.16 Aligned_cols=247 Identities=22% Similarity=0.293 Sum_probs=179.9
Q ss_pred CCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCee
Q 002149 104 KLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNL 183 (959)
Q Consensus 104 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L 183 (959)
....++.+++.++.++..+. +++++|+|++|+|+.+++..|.++++|++|+|++|.|+.
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~------------------- 102 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT------------------- 102 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCE-------------------
T ss_pred CCCEEEeCCCCcCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCc-------------------
Confidence 35678888888887776554 678899999999999888888889999999998888764
Q ss_pred cccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccc
Q 002149 184 SCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHF 263 (959)
Q Consensus 184 ~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l 263 (959)
..+..|.++++|++|+|++|+|+...+.. +.++++|++|+|++|++
T Consensus 103 ---------i~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------------------------~~~l~~L~~L~L~~N~i 148 (440)
T 3zyj_A 103 ---------IEIGAFNGLANLNTLELFDNRLTTIPNGA-------------------------FVYLSKLKELWLRNNPI 148 (440)
T ss_dssp ---------ECGGGGTTCSSCCEEECCSSCCSSCCTTT-------------------------SCSCSSCCEEECCSCCC
T ss_pred ---------cChhhccCCccCCEEECCCCcCCeeCHhH-------------------------hhccccCceeeCCCCcc
Confidence 22344555555666666666555433333 33445566666666666
Q ss_pred cccCchhhcCCCCCCEEeCCCC-cCCCCCccccccc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchh
Q 002149 264 SGTIPESFGKLTSLKDLNLNSN-QFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPE 341 (959)
Q Consensus 264 ~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (959)
++..+..|..+++|++|+|++| .+....+..|..+ +|+.|+|++|.++. +|.
T Consensus 149 ~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~------------------------- 202 (440)
T 3zyj_A 149 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPN------------------------- 202 (440)
T ss_dssp CEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCC-------------------------
T ss_pred cccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccc-------------------------
Confidence 5444455556666666666653 3333333345544 46666666666552 221
Q ss_pred hHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccC
Q 002149 342 VMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIP 421 (959)
Q Consensus 342 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p 421 (959)
+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|
T Consensus 203 ----------------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 248 (440)
T 3zyj_A 203 ----------------------------------LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIER 248 (440)
T ss_dssp ----------------------------------CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECT
T ss_pred ----------------------------------cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEECh
Confidence 1245789999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCeEeCCCCccCCCCCC----CCCcceecccCCCCCCCCC
Q 002149 422 TNWTNLKSLTLLDLSQNNLSPPLPK----FSGAVKLSLDGNPLLNGKS 465 (959)
Q Consensus 422 ~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~~~~~l~~N~~~c~~~ 465 (959)
..|.++++|+.|+|++|+|++.++. +.++..+.+.+|||.|...
T Consensus 249 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 249 NAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred hhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 9999999999999999999987764 3567789999999999863
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=1e-26 Score=251.59 Aligned_cols=219 Identities=24% Similarity=0.336 Sum_probs=194.4
Q ss_pred CCCCCCCc------ceEecC-----------CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCC
Q 002149 65 PCGPPCWK------HVFCSN-----------SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLS 126 (959)
Q Consensus 65 ~C~~~~w~------gv~C~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~ 126 (959)
+||..|-| .+.|+. ..++.|+++++++++..+..+..+++|++|+|++|.+++..+ .|.+++
T Consensus 1 ~CP~~C~C~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 80 (285)
T 1ozn_A 1 PCPGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA 80 (285)
T ss_dssp CCCTTCEEECSSSCEEECCSSCCSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CcCCCceECCCCCeEEEcCcCCcccCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCcc
Confidence 46665533 377864 368899999999998777889999999999999999999877 699999
Q ss_pred CccEEecCCCC-CCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCC
Q 002149 127 NLKYAYLDGNN-FDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQ 205 (959)
Q Consensus 127 ~L~~L~L~~N~-l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~ 205 (959)
+|++|+|++|. ++.+++..|..+++|++|+|++|+++. ..|..+..+++|++|++++|++.+..+..|..+++|+
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 156 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE----LGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLT 156 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCC----CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCE----ECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCcc
Confidence 99999999997 999999999999999999999999986 3467788999999999999999988888899999999
Q ss_pred EEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCC
Q 002149 206 NLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSN 285 (959)
Q Consensus 206 ~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 285 (959)
.|+|++|++++..+.. +..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 157 ~L~l~~n~l~~~~~~~-------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 157 HLFLHGNRISSVPERA-------------------------FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp EEECCSSCCCEECTTT-------------------------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCcccccCHHH-------------------------hcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 9999999999655554 566799999999999999888999999999999999999
Q ss_pred cCCCCCccccccc-cCCeEeCCCCcCCC
Q 002149 286 QFVGLIPPSLASL-SLDHLDLNNNMFMG 312 (959)
Q Consensus 286 ~l~~~~p~~~~~~-~L~~L~L~~N~l~~ 312 (959)
++++.++..+..+ +|+.|+|++|++..
T Consensus 212 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 212 NLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp CCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred cCCcCCHHHcccCcccCEEeccCCCccC
Confidence 9999888878877 59999999998875
No 308
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=6.3e-27 Score=256.04 Aligned_cols=247 Identities=20% Similarity=0.241 Sum_probs=172.1
Q ss_pred cEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecc
Q 002149 106 ENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSC 185 (959)
Q Consensus 106 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l 185 (959)
+.++++++.++..+..+. ++|++|+|++|+|+.++...|.++++|++|+|++|+++... ..+..+..+++|++|++
T Consensus 10 ~~l~c~~~~l~~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG--CCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSCCSSCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEE--EEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCCcccCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCccc--CcccccccccccCEEEC
Confidence 468899999987776553 68999999999999999999999999999999999886321 11333344445555555
Q ss_pred cccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccc
Q 002149 186 MSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSG 265 (959)
Q Consensus 186 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~ 265 (959)
++|++.. +|..+..+++|++|+++ +|++++
T Consensus 86 s~n~i~~-l~~~~~~l~~L~~L~l~-------------------------------------------------~n~l~~ 115 (306)
T 2z66_A 86 SFNGVIT-MSSNFLGLEQLEHLDFQ-------------------------------------------------HSNLKQ 115 (306)
T ss_dssp CSCSEEE-EEEEEETCTTCCEEECT-------------------------------------------------TSEEES
T ss_pred CCCcccc-ChhhcCCCCCCCEEECC-------------------------------------------------CCcccc
Confidence 5554442 33334444444444444 444443
Q ss_pred cCc-hhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCC-CCCcccccccccccCcccCCCCCCCCchhh
Q 002149 266 TIP-ESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMG-PVPKSKAYKYSYSSNAFCQPTEGVPCAPEV 342 (959)
Q Consensus 266 ~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~-~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (959)
..+ ..+..+++|++|+|++|++++..+..+..+ +|+.|+|++|.+++ .+|.
T Consensus 116 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-------------------------- 169 (306)
T 2z66_A 116 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPD-------------------------- 169 (306)
T ss_dssp STTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECS--------------------------
T ss_pred cccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchh--------------------------
Confidence 322 344444555555555555544444444443 35555555555443 1221
Q ss_pred HHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCC
Q 002149 343 MALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPT 422 (959)
Q Consensus 343 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 422 (959)
.++.+++|+.|+|++|++++..|..+.++++|++|+|++|++++..+.
T Consensus 170 --------------------------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 217 (306)
T 2z66_A 170 --------------------------------IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF 217 (306)
T ss_dssp --------------------------------CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSG
T ss_pred --------------------------------HHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChh
Confidence 123457899999999999988899999999999999999999987777
Q ss_pred CccCCCCCCeEeCCCCccCCCCCC----C-CCcceecccCCCCCCCC
Q 002149 423 NWTNLKSLTLLDLSQNNLSPPLPK----F-SGAVKLSLDGNPLLNGK 464 (959)
Q Consensus 423 ~l~~l~~L~~L~Ls~N~l~~~~p~----~-~~~~~~~l~~N~~~c~~ 464 (959)
.+..+++|+.|+|++|++++.+|. + .++..+++.+|++.|..
T Consensus 218 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 218 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp GGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred hccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 899999999999999999988774 2 36778999999999874
No 309
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=4.5e-28 Score=285.54 Aligned_cols=185 Identities=20% Similarity=0.154 Sum_probs=131.0
Q ss_pred cccccCceEEEEE-EEcCCcEEEEEEcccccc--------cHHHHHHHHHHHHHHHhc-CCCCceeEEEEEEeCceEEEE
Q 002149 618 ELGRGGFGVVYKG-ELDDGTKIAVKRMEAGVI--------SKKAVDEFHSEIAVLSKV-RHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 618 ~lG~G~fg~V~~~-~~~~~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 687 (959)
..+.|++|.+..+ +...|+.+|||.+.+... .....++|.+|+++|+++ .|+||++++++++++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3566777766665 344689999999875421 123456799999999999 699999999999999999999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||++|++|.+++... .+++.. +|+.||+.||+|+|+ +|||||||||+|||++.++++||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999542 456654 589999999999999 89999999999999999999999999999866
Q ss_pred CCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCC
Q 002149 768 PDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGL 815 (959)
Q Consensus 768 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~ 815 (959)
..... .....+||+.|||||++.+ .+..++|+||+|++++++.++.
T Consensus 390 ~~~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 390 PQDCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp C---C-CSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred CCCCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 54332 2345689999999999865 4677899999999988876653
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=3e-26 Score=265.02 Aligned_cols=247 Identities=25% Similarity=0.291 Sum_probs=174.6
Q ss_pred CCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCee
Q 002149 104 KLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNL 183 (959)
Q Consensus 104 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L 183 (959)
....++.+++.++..+..+. ++|++|+|++|+|+.+++..|.++++|++|+|++|+|+.
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~------------------- 113 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ------------------- 113 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE-------------------
T ss_pred CCcEEEECCCCcCccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCC-------------------
Confidence 35678888888887665554 578888888888888888888888888888888887764
Q ss_pred cccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccc
Q 002149 184 SCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHF 263 (959)
Q Consensus 184 ~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l 263 (959)
..+..|.++++|++|+|++|+|++..+.. +.++++|++|+|++|++
T Consensus 114 ---------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------------------------~~~l~~L~~L~L~~N~l 159 (452)
T 3zyi_A 114 ---------IEVGAFNGLASLNTLELFDNWLTVIPSGA-------------------------FEYLSKLRELWLRNNPI 159 (452)
T ss_dssp ---------ECTTTTTTCTTCCEEECCSSCCSBCCTTT-------------------------SSSCTTCCEEECCSCCC
T ss_pred ---------cChhhccCcccCCEEECCCCcCCccChhh-------------------------hcccCCCCEEECCCCCc
Confidence 22344445555555555555555333333 23345555555555555
Q ss_pred cccCchhhcCCCCCCEEeCCC-CcCCCCCccccccc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchh
Q 002149 264 SGTIPESFGKLTSLKDLNLNS-NQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPE 341 (959)
Q Consensus 264 ~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (959)
++..+..|..+++|++|+|++ |.+....+..|..+ +|+.|+|++|.+++. |.
T Consensus 160 ~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~------------------------- 213 (452)
T 3zyi_A 160 ESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PN------------------------- 213 (452)
T ss_dssp CEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CC-------------------------
T ss_pred ceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-cc-------------------------
Confidence 544444555555555555555 33333333344444 355666666655431 21
Q ss_pred hHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccC
Q 002149 342 VMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIP 421 (959)
Q Consensus 342 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p 421 (959)
+..+++|+.|+|++|+|.+..|..|.++++|+.|+|++|++++..|
T Consensus 214 ----------------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 259 (452)
T 3zyi_A 214 ----------------------------------LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIER 259 (452)
T ss_dssp ----------------------------------CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECT
T ss_pred ----------------------------------ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECH
Confidence 1234789999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCeEeCCCCccCCCCCC----CCCcceecccCCCCCCCCC
Q 002149 422 TNWTNLKSLTLLDLSQNNLSPPLPK----FSGAVKLSLDGNPLLNGKS 465 (959)
Q Consensus 422 ~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~~~~~l~~N~~~c~~~ 465 (959)
..|.++++|+.|+|++|+|++.++. +.++..+.+.+|||.|...
T Consensus 260 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 260 NAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred HHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 9999999999999999999987664 3567789999999999864
No 311
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.3e-26 Score=259.00 Aligned_cols=258 Identities=18% Similarity=0.221 Sum_probs=214.6
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.|+++++++++..+..+.++++|++|+|++|.+++..+ .|.++++|++|+|++|+|+.+++..|.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 479999999999997766789999999999999999999887 6999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCc--cccCccccCeecccccc-cCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccc
Q 002149 158 DSNNFNASKGWSFPK--GLQSSAQLTNLSCMSCN-LAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLND 234 (959)
Q Consensus 158 s~N~l~~~~~~~lp~--~l~~l~~L~~L~l~~n~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~ 234 (959)
++|+++. +|. .+..+++|++|++++|+ +....+..|.++++|++|++++|++++..|..
T Consensus 132 ~~n~l~~-----l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~------------- 193 (353)
T 2z80_A 132 LGNPYKT-----LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKS------------- 193 (353)
T ss_dssp TTCCCSS-----SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT-------------
T ss_pred CCCCCcc-----cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHH-------------
Confidence 9999984 555 68899999999999994 77677789999999999999999999877776
Q ss_pred cCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc----cCCeEeCCCCcC
Q 002149 235 QKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL----SLDHLDLNNNMF 310 (959)
Q Consensus 235 ~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~----~L~~L~L~~N~l 310 (959)
+.++++|++|+|++|+++...+..+..+++|++|+|++|++++..+..+... .++.++|++|.+
T Consensus 194 ------------l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l 261 (353)
T 2z80_A 194 ------------LKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKI 261 (353)
T ss_dssp ------------TTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBC
T ss_pred ------------HhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccc
Confidence 4667899999999999984444455568999999999999998776655432 488888888887
Q ss_pred CCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCC
Q 002149 311 MGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNF 390 (959)
Q Consensus 311 ~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N 390 (959)
++. .+..+.. .++.+++|+.|+|++|
T Consensus 262 ~~~---------------------------~l~~l~~---------------------------~l~~l~~L~~L~Ls~N 287 (353)
T 2z80_A 262 TDE---------------------------SLFQVMK---------------------------LLNQISGLLELEFSRN 287 (353)
T ss_dssp CHH---------------------------HHHHHHH---------------------------HHHTCTTCCEEECCSS
T ss_pred cCc---------------------------chhhhHH---------------------------HHhcccCCCEEECCCC
Confidence 641 0111111 1234589999999999
Q ss_pred cccccCCcc-ccCcCcCCEEeCcccccccccC
Q 002149 391 NLSGTLSPS-VGNLDSLTQIKLQSNNISGQIP 421 (959)
Q Consensus 391 ~l~~~~p~~-~~~l~~L~~L~L~~N~l~g~~p 421 (959)
+++ .+|.. |.++++|++|+|++|.+++..|
T Consensus 288 ~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 288 QLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 999 55555 6999999999999999986443
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=6.5e-28 Score=264.98 Aligned_cols=195 Identities=18% Similarity=0.179 Sum_probs=111.4
Q ss_pred cCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEE
Q 002149 77 SNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVL 155 (959)
Q Consensus 77 ~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 155 (959)
+..++...+++.+++...+...+..+++|++|+|++|.|++.++ .|.++++|++|+|++|+++.+++ |..+++|++|
T Consensus 8 ~g~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L 85 (317)
T 3o53_A 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTL 85 (317)
T ss_dssp ETTEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEE
T ss_pred CcCceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEE
Confidence 33455566666666665555555666777777777777777665 57777777777777777776654 7777777777
Q ss_pred EccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCccccccccc
Q 002149 156 ALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQ 235 (959)
Q Consensus 156 ~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~ 235 (959)
+|++|+++++ + ..++|+.|++++|++++..+.. +++|++|++++|++++..+..
T Consensus 86 ~Ls~n~l~~l-----~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~-------------- 139 (317)
T 3o53_A 86 DLNNNYVQEL-----L----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLD-------------- 139 (317)
T ss_dssp ECCSSEEEEE-----E----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBC--------------
T ss_pred ECcCCccccc-----c----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchh--------------
Confidence 7777777632 1 2245555555555555443322 345555555555555433333
Q ss_pred CCCCcccccccccCCcCCcEEEccCccccccCchhhc-CCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCC
Q 002149 236 KGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFG-KLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFM 311 (959)
Q Consensus 236 ~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~ 311 (959)
+..+++|++|+|++|++++..+..+. .+++|++|+|++|+|++. +......+|+.|+|++|.++
T Consensus 140 -----------~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~ 204 (317)
T 3o53_A 140 -----------EGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLA 204 (317)
T ss_dssp -----------TGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCC
T ss_pred -----------hhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCC
Confidence 23345555555555555554444442 455555555555555543 21111113444444444444
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=1.8e-27 Score=260.85 Aligned_cols=251 Identities=18% Similarity=0.213 Sum_probs=206.6
Q ss_pred ceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCC-CCCC-Ccc-------CCCCccEEecCCCCCCC-CC
Q 002149 73 HVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFR-GELP-SFS-------GLSNLKYAYLDGNNFDT-IP 142 (959)
Q Consensus 73 gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~-~~~~-~~~-------~l~~L~~L~L~~N~l~~-i~ 142 (959)
.+.|...+++.+++.++.+ .+|..+... |+.|+|++|.+. ...+ .+. ++++|++|+|++|+|++ +|
T Consensus 37 ~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 112 (312)
T 1wwl_A 37 ELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAP 112 (312)
T ss_dssp EEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCC
T ss_pred EEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhH
Confidence 3567777888999999999 788877665 999999999994 3444 343 79999999999999996 55
Q ss_pred hhhh-cCCCCCcEEEccCcccCCCCCCCCCccccCc-----cccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCC
Q 002149 143 ADFF-DGLENLQVLALDSNNFNASKGWSFPKGLQSS-----AQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTG 216 (959)
Q Consensus 143 ~~~~-~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l-----~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 216 (959)
...| ..+++|++|+|++|++++ +|..+..+ ++|++|++++|++.+..|..|+.+++|++|+|++|++.+
T Consensus 113 ~~~~~~~l~~L~~L~Ls~N~l~~-----~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 187 (312)
T 1wwl_A 113 PPLLEATGPDLNILNLRNVSWAT-----RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELG 187 (312)
T ss_dssp CCSSSCCSCCCSEEEEESCBCSS-----SSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCH
T ss_pred HHHHHhcCCCccEEEccCCCCcc-----hhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCc
Confidence 4433 899999999999999985 46667776 899999999999999988999999999999999999875
Q ss_pred CC--CcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccc--cCc-hhhcCCCCCCEEeCCCCcCCCCC
Q 002149 217 PI--PESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSG--TIP-ESFGKLTSLKDLNLNSNQFVGLI 291 (959)
Q Consensus 217 ~~--p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~ 291 (959)
.+ +..+. +.++++|++|+|++|++++ .++ ..+..+++|++|+|++|+|++.+
T Consensus 188 ~~~~~~~~~-----------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 188 ERGLISALC-----------------------PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp HHHHHHHSC-----------------------TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred chHHHHHHH-----------------------hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 42 22211 3678999999999999983 223 45568899999999999999987
Q ss_pred c-cccccc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCC
Q 002149 292 P-PSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCK 369 (959)
Q Consensus 292 p-~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 369 (959)
| ..+..+ +|+.|+|++|.++ .+|..
T Consensus 245 ~~~~~~~l~~L~~L~Ls~N~l~-~ip~~---------------------------------------------------- 271 (312)
T 1wwl_A 245 GAPSCDWPSQLNSLNLSFTGLK-QVPKG---------------------------------------------------- 271 (312)
T ss_dssp CCSCCCCCTTCCEEECTTSCCS-SCCSS----------------------------------------------------
T ss_pred chhhhhhcCCCCEEECCCCccC-hhhhh----------------------------------------------------
Confidence 5 444444 6999999999998 56641
Q ss_pred cccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCccccccc
Q 002149 370 SWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISG 418 (959)
Q Consensus 370 ~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g 418 (959)
+. ++|+.|+|++|+|++. |. +..+++|++|+|++|.+++
T Consensus 272 ------~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 272 ------LP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp ------CC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred ------cc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 01 6899999999999977 65 9999999999999999985
No 314
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.2e-26 Score=269.77 Aligned_cols=237 Identities=19% Similarity=0.191 Sum_probs=151.3
Q ss_pred CCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccC
Q 002149 103 SKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLT 181 (959)
Q Consensus 103 ~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~ 181 (959)
++|++|+|++|.|++.+| .|.++++|++|+|++|.|+++++ |..+++|++|+|++|.|++ +|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-----l~---------- 96 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-----LL---------- 96 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-----EE----------
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-----CC----------
Confidence 366777777777766655 46666667777777766665554 6666666666666666653 11
Q ss_pred eecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCc
Q 002149 182 NLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGN 261 (959)
Q Consensus 182 ~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N 261 (959)
..++|+.|+|++|.+++..+.. +++|++|+|++|
T Consensus 97 ------------------~~~~L~~L~L~~N~l~~~~~~~----------------------------l~~L~~L~L~~N 130 (487)
T 3oja_A 97 ------------------VGPSIETLHAANNNISRVSCSR----------------------------GQGKKNIYLANN 130 (487)
T ss_dssp ------------------ECTTCCEEECCSSCCCCEEECC----------------------------CSSCEEEECCSS
T ss_pred ------------------CCCCcCEEECcCCcCCCCCccc----------------------------cCCCCEEECCCC
Confidence 1255666666666665433221 245666666666
Q ss_pred cccccCchhhcCCCCCCEEeCCCCcCCCCCccccc-cc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCc
Q 002149 262 HFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLA-SL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCA 339 (959)
Q Consensus 262 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~ 339 (959)
.+++..|..|+.+++|++|+|++|.|++.+|..+. .+ +|+.|+|++|.+++..+
T Consensus 131 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~------------------------ 186 (487)
T 3oja_A 131 KITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG------------------------ 186 (487)
T ss_dssp CCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC------------------------
T ss_pred CCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc------------------------
Confidence 66666666666666666666666666665555554 33 46666666666654211
Q ss_pred hhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccc
Q 002149 340 PEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQ 419 (959)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ 419 (959)
...+++|+.|+|++|+|++..| .+..+++|+.|+|++|.|++
T Consensus 187 ------------------------------------~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~- 228 (487)
T 3oja_A 187 ------------------------------------QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL- 228 (487)
T ss_dssp ------------------------------------CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-
T ss_pred ------------------------------------cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-
Confidence 0124678888888888886444 48888888888888888884
Q ss_pred cCCCccCCCCCCeEeCCCCccC-CCCCCC----CCcceeccc-------CCCCCCCC
Q 002149 420 IPTNWTNLKSLTLLDLSQNNLS-PPLPKF----SGAVKLSLD-------GNPLLNGK 464 (959)
Q Consensus 420 ~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~----~~~~~~~l~-------~N~~~c~~ 464 (959)
+|..+..+++|+.|+|++|++. +.+|.+ ..+..+.+. +|++.|..
T Consensus 229 lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~c~~ 285 (487)
T 3oja_A 229 IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTV 285 (487)
T ss_dssp ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHHHHHHTSSSSCCCSS
T ss_pred cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccccccccCCCcccccC
Confidence 7778888888888888888887 444432 222333443 67777764
No 315
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=8.3e-25 Score=234.32 Aligned_cols=216 Identities=26% Similarity=0.372 Sum_probs=190.9
Q ss_pred CCCCCCCCCcceEecC-CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCC
Q 002149 63 GDPCGPPCWKHVFCSN-SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDT 140 (959)
Q Consensus 63 ~~~C~~~~w~gv~C~~-~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~ 140 (959)
++.|. |.|+.|.. ..++.|++++++++ .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|+|+.
T Consensus 2 ~~~C~---~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 75 (270)
T 2o6q_A 2 EALCK---KDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT 75 (270)
T ss_dssp CCCBG---GGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSC
T ss_pred CccCC---CCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCe
Confidence 46676 99888764 35778999999999 5777665 689999999999999887 69999999999999999999
Q ss_pred CChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCc
Q 002149 141 IPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPE 220 (959)
Q Consensus 141 i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 220 (959)
+++..|.++++|++|+|++|+++.+ .+..+..+++|++|++++|++++..+..|..+++|++|+|++|++++..+.
T Consensus 76 i~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 151 (270)
T 2o6q_A 76 LPAGIFKELKNLETLWVTDNKLQAL----PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKG 151 (270)
T ss_dssp CCTTTTSSCTTCCEEECCSSCCCCC----CTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred eChhhhcCCCCCCEEECCCCcCCcC----CHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHh
Confidence 9999999999999999999999852 234568899999999999999998888999999999999999999966555
Q ss_pred ccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-c
Q 002149 221 SFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-S 299 (959)
Q Consensus 221 ~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~ 299 (959)
. +..+++|++|+|++|++++..+..|..+++|++|+|++|+|++.++..+..+ +
T Consensus 152 ~-------------------------~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 206 (270)
T 2o6q_A 152 V-------------------------FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEK 206 (270)
T ss_dssp T-------------------------TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred H-------------------------ccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccC
Confidence 4 4667999999999999998777889999999999999999998888888877 6
Q ss_pred CCeEeCCCCcCCCC
Q 002149 300 LDHLDLNNNMFMGP 313 (959)
Q Consensus 300 L~~L~L~~N~l~~~ 313 (959)
|+.|+|++|++...
T Consensus 207 L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 207 LKMLQLQENPWDCT 220 (270)
T ss_dssp CCEEECCSSCBCCS
T ss_pred CCEEEecCCCeeCC
Confidence 99999999999754
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=8.4e-26 Score=248.13 Aligned_cols=254 Identities=21% Similarity=0.204 Sum_probs=209.2
Q ss_pred CCcEEeccCCcCCCCCCC-ccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCe
Q 002149 104 KLENIGLQKNQFRGELPS-FSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTN 182 (959)
Q Consensus 104 ~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~ 182 (959)
+++.++++.+.+...+.. +..+++|++|+|++|+|+.+++..|.++++|++|+|++|++++ +++ +..+++|++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-----~~~-~~~l~~L~~ 84 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE-----TLD-LESLSTLRT 84 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEE-----EEE-ETTCTTCCE
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCc-----chh-hhhcCCCCE
Confidence 345667888887655553 5678899999999999999999999999999999999999985 233 889999999
Q ss_pred ecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcc
Q 002149 183 LSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNH 262 (959)
Q Consensus 183 L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~ 262 (959)
|++++|++++.. ..++|++|++++|++++..+.. +++|++|+|++|+
T Consensus 85 L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~----------------------------~~~L~~L~l~~N~ 131 (317)
T 3o53_A 85 LDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR----------------------------GQGKKNIYLANNK 131 (317)
T ss_dssp EECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC----------------------------CSSCEEEECCSSC
T ss_pred EECcCCcccccc-----CCCCcCEEECCCCccCCcCccc----------------------------cCCCCEEECCCCC
Confidence 999999998543 3489999999999998654332 4789999999999
Q ss_pred ccccCchhhcCCCCCCEEeCCCCcCCCCCccccc-cc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCch
Q 002149 263 FSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLA-SL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAP 340 (959)
Q Consensus 263 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (959)
+++..+..+..+++|++|+|++|++++..+..+. .+ +|+.|+|++|.+++. |.
T Consensus 132 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~------------------------ 186 (317)
T 3o53_A 132 ITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG------------------------ 186 (317)
T ss_dssp CCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC------------------------
T ss_pred CCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc------------------------
Confidence 9988888999999999999999999988777764 44 699999999999753 11
Q ss_pred hhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCccccccccc
Q 002149 341 EVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQI 420 (959)
Q Consensus 341 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~ 420 (959)
...+++|+.|+|++|++++. |..+..+++|++|+|++|+|+ .+
T Consensus 187 -----------------------------------~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l 229 (317)
T 3o53_A 187 -----------------------------------QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LI 229 (317)
T ss_dssp -----------------------------------CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EE
T ss_pred -----------------------------------ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-ch
Confidence 01247899999999999965 555999999999999999999 68
Q ss_pred CCCccCCCCCCeEeCCCCccC-CCCCC----CCCcceecccCC
Q 002149 421 PTNWTNLKSLTLLDLSQNNLS-PPLPK----FSGAVKLSLDGN 458 (959)
Q Consensus 421 p~~l~~l~~L~~L~Ls~N~l~-~~~p~----~~~~~~~~l~~N 458 (959)
|..+..+++|+.|+|++|+++ +.+|. +..+..+.+.+|
T Consensus 230 ~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 230 EKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp CTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCc
Confidence 999999999999999999998 55553 233444555544
No 317
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.2e-25 Score=261.23 Aligned_cols=219 Identities=21% Similarity=0.206 Sum_probs=179.7
Q ss_pred CCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCC
Q 002149 124 GLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFAS 203 (959)
Q Consensus 124 ~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~ 203 (959)
.+++|++|+|++|+|+.+++..|..+++|++|+|++|.+++ ..| |..+++
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~----------------------------~~~--l~~l~~ 81 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE----------------------------TLD--LESLST 81 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEE----------------------------EEE--CTTCTT
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCC----------------------------Ccc--cccCCC
Confidence 34588999999999988888888888888888888887763 222 677899
Q ss_pred CCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCC
Q 002149 204 LQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLN 283 (959)
Q Consensus 204 L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 283 (959)
|++|+|++|.|++.. ..++|++|+|++|.|++..+. .+++|+.|+|+
T Consensus 82 L~~L~Ls~N~l~~l~------------------------------~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~ 128 (487)
T 3oja_A 82 LRTLDLNNNYVQELL------------------------------VGPSIETLHAANNNISRVSCS---RGQGKKNIYLA 128 (487)
T ss_dssp CCEEECCSSEEEEEE------------------------------ECTTCCEEECCSSCCCCEEEC---CCSSCEEEECC
T ss_pred CCEEEecCCcCCCCC------------------------------CCCCcCEEECcCCcCCCCCcc---ccCCCCEEECC
Confidence 999999999988422 127899999999999977664 46889999999
Q ss_pred CCcCCCCCccccccc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCccccccc
Q 002149 284 SNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSW 362 (959)
Q Consensus 284 ~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 362 (959)
+|.|++.+|..+..+ +|+.|+|++|.+++.+|...
T Consensus 129 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l-------------------------------------------- 164 (487)
T 3oja_A 129 NNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL-------------------------------------------- 164 (487)
T ss_dssp SSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGG--------------------------------------------
T ss_pred CCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHH--------------------------------------------
Confidence 999999989888877 69999999999997655321
Q ss_pred CCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCC
Q 002149 363 SGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSP 442 (959)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~ 442 (959)
.+.+++|+.|+|++|.|++..+ +..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|.|++
T Consensus 165 -------------~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 165 -------------AASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL 228 (487)
T ss_dssp -------------GGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE
T ss_pred -------------hhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc
Confidence 1134789999999999997733 4469999999999999996 55569999999999999999997
Q ss_pred CCCCC---CCcceecccCCCCCCCCC
Q 002149 443 PLPKF---SGAVKLSLDGNPLLNGKS 465 (959)
Q Consensus 443 ~~p~~---~~~~~~~l~~N~~~c~~~ 465 (959)
.++.+ ..+..+++.+|++.|+..
T Consensus 229 lp~~l~~l~~L~~L~l~~N~l~c~~~ 254 (487)
T 3oja_A 229 IEKALRFSQNLEHFDLRGNGFHCGTL 254 (487)
T ss_dssp ECTTCCCCTTCCEEECTTCCBCHHHH
T ss_pred cchhhccCCCCCEEEcCCCCCcCcch
Confidence 54443 467789999999998754
No 318
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=9.1e-26 Score=264.43 Aligned_cols=186 Identities=17% Similarity=0.161 Sum_probs=146.7
Q ss_pred cccCcccccCceEEEEEEEcCCcEEEEEEcccccccH------HHHHHHHHHHHHHHhcCCCCceeEEEEEEeCceEEEE
Q 002149 614 ASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISK------KAVDEFHSEIAVLSKVRHRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 614 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 687 (959)
...+.||+|+||.||+|.. .++.+|+|+........ ...+.+.+|++++++++||||+++..++......++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 47889999865432221 1245689999999999999999777777777888999
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
|||+++|+|.+++.. +..++.|+++||+|||+ ++|+||||||+|||++. .+||+|||+|+..
T Consensus 418 mE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 418 MSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 999999999998843 45799999999999999 89999999999999999 9999999999977
Q ss_pred CCCCcce------eecccccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCC
Q 002149 768 PDSERSV------VTRLAGTFGYLAPEYAVT--GKITTKVDVFSFGVVLMELLTGLMAL 818 (959)
Q Consensus 768 ~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~ll~elltg~~p~ 818 (959)
....... .....||+.|||||++.. ..|+.+.|+||..+-..+-+.++.++
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 5532211 235689999999999977 66888899999999888888776655
No 319
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=2.8e-24 Score=231.14 Aligned_cols=158 Identities=26% Similarity=0.347 Sum_probs=121.1
Q ss_pred EecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccC
Q 002149 85 QVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFN 163 (959)
Q Consensus 85 ~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~ 163 (959)
+..+.+++ .+|..+. ++|++|+|++|.+++.++ .|.++++|++|+|++|+++.+++..|.++++|++|+|++|+++
T Consensus 13 ~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 33444444 4565553 478899999999988877 6888889999999999988888888888888888888888776
Q ss_pred CCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccc
Q 002149 164 ASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGT 243 (959)
Q Consensus 164 ~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~ 243 (959)
. ..+..|.++++|++|++++|++++..+..
T Consensus 90 ~----------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---------------------- 119 (276)
T 2z62_A 90 S----------------------------LALGAFSGLSSLQKLVAVETNLASLENFP---------------------- 119 (276)
T ss_dssp E----------------------------ECTTTTTTCTTCCEEECTTSCCCCSTTCC----------------------
T ss_pred c----------------------------cChhhhcCCccccEEECCCCCccccCchh----------------------
Confidence 3 33456677788888888888887655544
Q ss_pred cccccCCcCCcEEEccCcccccc-CchhhcCCCCCCEEeCCCCcCCCCCccccccc
Q 002149 244 IDVLGNMDQLRTLWLHGNHFSGT-IPESFGKLTSLKDLNLNSNQFVGLIPPSLASL 298 (959)
Q Consensus 244 ~~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 298 (959)
+.++++|++|+|++|++++. +|..|..+++|++|+|++|++++..+..+..+
T Consensus 120 ---~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 172 (276)
T 2z62_A 120 ---IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 172 (276)
T ss_dssp ---CTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHH
T ss_pred ---cccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhh
Confidence 45668888888888888763 68888889999999999998887766665544
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=6.1e-24 Score=228.52 Aligned_cols=230 Identities=19% Similarity=0.208 Sum_probs=180.0
Q ss_pred EEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeeccc
Q 002149 107 NIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCM 186 (959)
Q Consensus 107 ~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~ 186 (959)
.++.++..+...+..+. ++|++|+|++|+|+.+++..|.++++|++|+|++|+++.
T Consensus 11 ~~~c~~~~l~~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---------------------- 66 (276)
T 2z62_A 11 TYQCMELNFYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT---------------------- 66 (276)
T ss_dssp EEECTTSCCSSCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCE----------------------
T ss_pred eEEecCCCccccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCc----------------------
Confidence 45566666665555443 468888888888888777777777778888777776653
Q ss_pred ccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcccccc
Q 002149 187 SCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGT 266 (959)
Q Consensus 187 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~ 266 (959)
..+..|..+++|++|+|++|++++..+.. +.++++|++|++++|++++.
T Consensus 67 ------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------------------------~~~l~~L~~L~l~~n~l~~~ 115 (276)
T 2z62_A 67 ------IEDGAYQSLSHLSTLILTGNPIQSLALGA-------------------------FSGLSSLQKLVAVETNLASL 115 (276)
T ss_dssp ------ECTTTTTTCTTCCEEECTTCCCCEECTTT-------------------------TTTCTTCCEEECTTSCCCCS
T ss_pred ------cCHHHccCCcCCCEEECCCCccCccChhh-------------------------hcCCccccEEECCCCCcccc
Confidence 34556788999999999999999776665 56779999999999999987
Q ss_pred CchhhcCCCCCCEEeCCCCcCCCC-Cccccccc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHH
Q 002149 267 IPESFGKLTSLKDLNLNSNQFVGL-IPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMA 344 (959)
Q Consensus 267 ~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (959)
.+..+..+++|++|+|++|++++. +|..+..+ +|+.|+|++|++++..+.... .
T Consensus 116 ~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~------------------------~ 171 (276)
T 2z62_A 116 ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR------------------------V 171 (276)
T ss_dssp TTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH------------------------H
T ss_pred CchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhh------------------------h
Confidence 777899999999999999999975 58888887 699999999999864332100 0
Q ss_pred HHhhccCCCCCcccccccCCCCCCCcccccccCCCCccc-EEECCCCcccccCCccccCcCcCCEEeCcccccccccCCC
Q 002149 345 LIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLT-VLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTN 423 (959)
Q Consensus 345 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 423 (959)
+..++.|. .|+|++|++.+..+..+.. .+|++|+|++|+|++..+..
T Consensus 172 -------------------------------l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~ 219 (276)
T 2z62_A 172 -------------------------------LHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGI 219 (276)
T ss_dssp -------------------------------HHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTT
T ss_pred -------------------------------hhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhH
Confidence 01123333 8999999999766665544 58999999999999766667
Q ss_pred ccCCCCCCeEeCCCCccCCCCCCC
Q 002149 424 WTNLKSLTLLDLSQNNLSPPLPKF 447 (959)
Q Consensus 424 l~~l~~L~~L~Ls~N~l~~~~p~~ 447 (959)
|..+++|+.|+|++|++++..|..
T Consensus 220 ~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 220 FDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp TTTCCSCCEEECCSSCBCCCTTTT
T ss_pred hcccccccEEEccCCcccccCCch
Confidence 899999999999999999877653
No 321
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=5.1e-23 Score=243.86 Aligned_cols=255 Identities=24% Similarity=0.335 Sum_probs=189.3
Q ss_pred CCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCe
Q 002149 103 SKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTN 182 (959)
Q Consensus 103 ~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~ 182 (959)
.+++.|++++|.|+.++..+. ++|++|+|++|+|+.+|. .+++|++|+|++|+|+. +|. .+++|++
T Consensus 40 ~~l~~L~ls~n~L~~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~-----lp~---~l~~L~~ 105 (622)
T 3g06_A 40 NGNAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTS-----LPV---LPPGLLE 105 (622)
T ss_dssp HCCCEEECCSSCCSCCCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCSC-----CCC---CCTTCCE
T ss_pred CCCcEEEecCCCcCccChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCCc-----CCC---CCCCCCE
Confidence 468999999999997666665 899999999999999987 57999999999999984 555 6789999
Q ss_pred ecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcc
Q 002149 183 LSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNH 262 (959)
Q Consensus 183 L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~ 262 (959)
|++++|++++. |. .+++|+.|+|++|+|++ +|..+ .++..|.+.++....++. .+++|+.|+|++|+
T Consensus 106 L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~l--~~L~~L~Ls~N~l~~l~~------~~~~L~~L~L~~N~ 172 (622)
T 3g06_A 106 LSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVLP--PGLQELSVSDNQLASLPA------LPSELCKLWAYNNQ 172 (622)
T ss_dssp EEECSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCSCCCC------CCTTCCEEECCSSC
T ss_pred EECcCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCCC--CCCCEEECcCCcCCCcCC------ccCCCCEEECCCCC
Confidence 99999999964 44 57899999999999995 55443 234445544444333322 23556666666666
Q ss_pred ccccCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhh
Q 002149 263 FSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEV 342 (959)
Q Consensus 263 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (959)
|++ +| ..+++|+.|+|++|+|++. |..+ .+|+.|++++|.++. +|.
T Consensus 173 l~~-l~---~~~~~L~~L~Ls~N~l~~l-~~~~--~~L~~L~L~~N~l~~-l~~-------------------------- 218 (622)
T 3g06_A 173 LTS-LP---MLPSGLQELSVSDNQLASL-PTLP--SELYKLWAYNNRLTS-LPA-------------------------- 218 (622)
T ss_dssp CSC-CC---CCCTTCCEEECCSSCCSCC-CCCC--TTCCEEECCSSCCSS-CCC--------------------------
T ss_pred CCC-Cc---ccCCCCcEEECCCCCCCCC-CCcc--chhhEEECcCCcccc-cCC--------------------------
Confidence 663 44 3456666666666666643 2221 246666666666652 221
Q ss_pred HHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCC
Q 002149 343 MALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPT 422 (959)
Q Consensus 343 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 422 (959)
.+++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|.
T Consensus 219 -----------------------------------~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~ 258 (622)
T 3g06_A 219 -----------------------------------LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM 258 (622)
T ss_dssp -----------------------------------CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC
T ss_pred -----------------------------------CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc
Confidence 13689999999999996 55 55689999999999999 6776
Q ss_pred CccCCCCCCeEeCCCCccCCCCCC----CCCcceecccCCCCCC
Q 002149 423 NWTNLKSLTLLDLSQNNLSPPLPK----FSGAVKLSLDGNPLLN 462 (959)
Q Consensus 423 ~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~~~~~l~~N~~~c 462 (959)
.+++|+.|+|++|+|+ .+|. +.++..+++.+|++..
T Consensus 259 ---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 259 ---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSE 298 (622)
T ss_dssp ---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCH
T ss_pred ---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCC
Confidence 6789999999999999 4553 4567789999998763
No 322
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=7.7e-27 Score=271.12 Aligned_cols=347 Identities=18% Similarity=0.154 Sum_probs=198.3
Q ss_pred CcEEEEEecCCcccc----cCcccccCCCCCcEEeccCCcCCCCCC-Cc-cCCC----CccEEecCCCCCCCC----Chh
Q 002149 79 SRVTQIQVSSVGLKG----TLPQNLNQLSKLENIGLQKNQFRGELP-SF-SGLS----NLKYAYLDGNNFDTI----PAD 144 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g----~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~-~~l~----~L~~L~L~~N~l~~i----~~~ 144 (959)
.+++.|++++++++. .++..+..+++|++|+|++|.++...+ .+ ..++ +|++|+|++|+|+.. .+.
T Consensus 28 ~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 107 (461)
T 1z7x_W 28 QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSS 107 (461)
T ss_dssp TTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHH
Confidence 356677777777663 345666777777777777777765332 22 2333 577777777777642 255
Q ss_pred hhcCCCCCcEEEccCcccCCCCCCCCCccc-cCccccCeecccccccCCCC----ChhhcCCCCCCEEEecCCcCCCCCC
Q 002149 145 FFDGLENLQVLALDSNNFNASKGWSFPKGL-QSSAQLTNLSCMSCNLAGQL----PDFLGNFASLQNLKLSGNNLTGPIP 219 (959)
Q Consensus 145 ~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l-~~l~~L~~L~l~~n~l~~~~----p~~l~~l~~L~~L~Ls~N~l~~~~p 219 (959)
.|..+++|++|+|++|.++......+...+ ...++|++|++++|++++.. +..+..+++|++|+|++|.++...+
T Consensus 108 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 187 (461)
T 1z7x_W 108 TLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGV 187 (461)
T ss_dssp HTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHH
T ss_pred HHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHH
Confidence 567777777777777776532111122221 22456777777777776532 4555566777777777777664333
Q ss_pred ccccc------CCcccccccccCCCCcc--cccccccCCcCCcEEEccCccccccC-----chhhcCCCCCCEEeCCCCc
Q 002149 220 ESFKG------LNLVNLWLNDQKGGGFT--GTIDVLGNMDQLRTLWLHGNHFSGTI-----PESFGKLTSLKDLNLNSNQ 286 (959)
Q Consensus 220 ~~~~~------l~l~~L~~~~~~~~~l~--~~~~~l~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~ 286 (959)
..+.. -+++.|.+.++...... .....+..+++|++|+|++|++++.. +..+..+++|++|+|++|+
T Consensus 188 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~ 267 (461)
T 1z7x_W 188 RVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECG 267 (461)
T ss_dssp HHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCC
Confidence 32211 14444554444332211 11234556677777777777776432 2223346777777777777
Q ss_pred CCCC----Cccccccc-cCCeEeCCCCcCCCCCCcc----------cccccccccCcccCCCCCCCCchhhHHHHhhccC
Q 002149 287 FVGL----IPPSLASL-SLDHLDLNNNMFMGPVPKS----------KAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGG 351 (959)
Q Consensus 287 l~~~----~p~~~~~~-~L~~L~L~~N~l~~~ip~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (959)
++.. ++..+..+ +|+.|+|++|.+++..+.. ....+.+++|.+... ....
T Consensus 268 l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~--------~~~~------- 332 (461)
T 1z7x_W 268 ITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA--------CCSH------- 332 (461)
T ss_dssp CCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGG--------GHHH-------
T ss_pred CCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchH--------HHHH-------
Confidence 7654 34444444 4777777777765321110 001111111111100 0000
Q ss_pred CCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccC-----cCcCCEEeCccccccc----ccCC
Q 002149 352 LNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGN-----LDSLTQIKLQSNNISG----QIPT 422 (959)
Q Consensus 352 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~g----~~p~ 422 (959)
+...+..+++|+.|+|++|++.+..+..+.. .++|++|+|++|++++ .+|.
T Consensus 333 --------------------l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 392 (461)
T 1z7x_W 333 --------------------FSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 392 (461)
T ss_dssp --------------------HHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred --------------------HHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHH
Confidence 0111223478888888888887765554443 5688888888888886 6787
Q ss_pred CccCCCCCCeEeCCCCccCCC--------CCC-CCCcceecccCCCC
Q 002149 423 NWTNLKSLTLLDLSQNNLSPP--------LPK-FSGAVKLSLDGNPL 460 (959)
Q Consensus 423 ~l~~l~~L~~L~Ls~N~l~~~--------~p~-~~~~~~~~l~~N~~ 460 (959)
.+..+++|+.|+|++|++++. +|. ...+..+.+.++.+
T Consensus 393 ~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~ 439 (461)
T 1z7x_W 393 TLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYW 439 (461)
T ss_dssp HHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCC
T ss_pred HHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeeccccc
Confidence 888888888888888888743 332 23455566655544
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=9.3e-23 Score=218.34 Aligned_cols=204 Identities=21% Similarity=0.300 Sum_probs=132.5
Q ss_pred CCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCee
Q 002149 104 KLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNL 183 (959)
Q Consensus 104 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L 183 (959)
+++.+++++|.++.++..+. ++|++|+|++|+|+.+++..|.++++|++|+|++|+++.
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~------------------- 75 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT------------------- 75 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSC-------------------
T ss_pred CCCEEEccCCCCCccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCe-------------------
Confidence 45667777777776544443 466777777777777766666666677777666666542
Q ss_pred cccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccc
Q 002149 184 SCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHF 263 (959)
Q Consensus 184 ~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l 263 (959)
..+..|..+++|++|+|++|++++..+.. +.++++|++|+|++|++
T Consensus 76 ---------i~~~~~~~l~~L~~L~l~~n~l~~~~~~~-------------------------~~~l~~L~~L~l~~n~l 121 (270)
T 2o6q_A 76 ---------LPAGIFKELKNLETLWVTDNKLQALPIGV-------------------------FDQLVNLAELRLDRNQL 121 (270)
T ss_dssp ---------CCTTTTSSCTTCCEEECCSSCCCCCCTTT-------------------------TTTCSSCCEEECCSSCC
T ss_pred ---------eChhhhcCCCCCCEEECCCCcCCcCCHhH-------------------------cccccCCCEEECCCCcc
Confidence 22334456667777777777766544433 34556677777777777
Q ss_pred cccCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhH
Q 002149 264 SGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVM 343 (959)
Q Consensus 264 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (959)
++..+..|..+++|++|+|++|+|++..+..|.
T Consensus 122 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~----------------------------------------------- 154 (270)
T 2o6q_A 122 KSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFD----------------------------------------------- 154 (270)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT-----------------------------------------------
T ss_pred CeeCHHHhCcCcCCCEEECCCCcCCccCHhHcc-----------------------------------------------
Confidence 666666666677777777777766654433332
Q ss_pred HHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCC
Q 002149 344 ALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTN 423 (959)
Q Consensus 344 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 423 (959)
.+++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..
T Consensus 155 ----------------------------------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 200 (270)
T 2o6q_A 155 ----------------------------------KLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGA 200 (270)
T ss_dssp ----------------------------------TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred ----------------------------------CCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHH
Confidence 2356667777777776666666777788888888888887655556
Q ss_pred ccCCCCCCeEeCCCCccCCC
Q 002149 424 WTNLKSLTLLDLSQNNLSPP 443 (959)
Q Consensus 424 l~~l~~L~~L~Ls~N~l~~~ 443 (959)
|..+++|+.|+|++|++...
T Consensus 201 ~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 201 FDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTCTTCCEEECCSSCBCCS
T ss_pred hccccCCCEEEecCCCeeCC
Confidence 77788888888777766543
No 324
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=1.2e-26 Score=269.56 Aligned_cols=348 Identities=15% Similarity=0.132 Sum_probs=246.6
Q ss_pred cEEEEEecCCcccccCccc-ccCCCCCcEEeccCCcCCCC----CC-CccCCCCccEEecCCCCCCCCCh-hhhcCCC--
Q 002149 80 RVTQIQVSSVGLKGTLPQN-LNQLSKLENIGLQKNQFRGE----LP-SFSGLSNLKYAYLDGNNFDTIPA-DFFDGLE-- 150 (959)
Q Consensus 80 ~v~~l~l~~~~l~g~~~~~-l~~l~~L~~L~Ls~N~l~~~----~~-~~~~l~~L~~L~L~~N~l~~i~~-~~~~~l~-- 150 (959)
+++.|+|++++++...... +..+++|++|+|++|.++.. ++ .+..+++|++|+|++|+++.... ..+..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 6889999999998654443 88899999999999999853 22 57888999999999999986443 3344566
Q ss_pred --CCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhc-----CCCCCCEEEecCCcCCCCC----C
Q 002149 151 --NLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLG-----NFASLQNLKLSGNNLTGPI----P 219 (959)
Q Consensus 151 --~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~-----~l~~L~~L~Ls~N~l~~~~----p 219 (959)
+|++|+|++|+++......++..+..+++|++|++++|.+....+..+. ..++|++|+|++|++++.. +
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 7999999999998543345688899999999999999999865444433 3568999999999998744 3
Q ss_pred cccccC-CcccccccccCCCCccc--ccccc-cCCcCCcEEEccCcccccc----CchhhcCCCCCCEEeCCCCcCCCCC
Q 002149 220 ESFKGL-NLVNLWLNDQKGGGFTG--TIDVL-GNMDQLRTLWLHGNHFSGT----IPESFGKLTSLKDLNLNSNQFVGLI 291 (959)
Q Consensus 220 ~~~~~l-~l~~L~~~~~~~~~l~~--~~~~l-~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~ 291 (959)
..+..+ +++.|.+.++....... ....+ ..+++|++|+|++|.+++. ++..+..+++|++|+|++|+++...
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 333332 56666666554322111 00111 1356999999999999964 6888889999999999999998653
Q ss_pred cc-----ccccc-cCCeEeCCCCcCCCC----CCcc-----cccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCc
Q 002149 292 PP-----SLASL-SLDHLDLNNNMFMGP----VPKS-----KAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPP 356 (959)
Q Consensus 292 p~-----~~~~~-~L~~L~L~~N~l~~~----ip~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (959)
.. .+... +|+.|+|++|.+++. ++.. ....+.+++|.+... ....+.
T Consensus 244 ~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~--------~~~~l~---------- 305 (461)
T 1z7x_W 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE--------GARLLC---------- 305 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH--------HHHHHH----------
T ss_pred HHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH--------HHHHHH----------
Confidence 22 22223 699999999999853 2221 011122233322100 000000
Q ss_pred ccccccCCCCCCCcccccccCCCCcccEEECCCCccccc----CCccccCcCcCCEEeCcccccccccCCCccC-----C
Q 002149 357 RLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGT----LSPSVGNLDSLTQIKLQSNNISGQIPTNWTN-----L 427 (959)
Q Consensus 357 ~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~-----l 427 (959)
.......++|+.|+|++|.+++. ++..+..+++|++|+|++|++++..+..+.. +
T Consensus 306 ----------------~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~ 369 (461)
T 1z7x_W 306 ----------------ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPG 369 (461)
T ss_dssp ----------------HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTT
T ss_pred ----------------HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCC
Confidence 00011236899999999999876 5667778899999999999998766655543 6
Q ss_pred CCCCeEeCCCCccCC----CCCC----CCCcceecccCCCCC
Q 002149 428 KSLTLLDLSQNNLSP----PLPK----FSGAVKLSLDGNPLL 461 (959)
Q Consensus 428 ~~L~~L~Ls~N~l~~----~~p~----~~~~~~~~l~~N~~~ 461 (959)
++|+.|+|++|++++ .+|. ...+..+++.+|++.
T Consensus 370 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 370 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred CceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 799999999999985 4443 467888999998654
No 325
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=4.6e-24 Score=228.70 Aligned_cols=223 Identities=21% Similarity=0.229 Sum_probs=125.2
Q ss_pred CCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCee
Q 002149 104 KLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNL 183 (959)
Q Consensus 104 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L 183 (959)
.+..+++..+.+.... .+..+++|+.|++++|.++.++. +..+++|++|+|++|.+++ + ..+..+++|++|
T Consensus 20 ~l~~l~l~~~~~~~~~-~~~~l~~L~~L~l~~~~i~~~~~--l~~l~~L~~L~l~~n~l~~-----~-~~l~~l~~L~~L 90 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQG--IQYLPNVRYLALGGNKLHD-----I-SALKELTNLTYL 90 (272)
T ss_dssp HHHHHHHTCSCTTSEE-CHHHHTTCCEEECTTSCCCCCTT--GGGCTTCCEEECTTSCCCC-----C-GGGTTCTTCCEE
T ss_pred HHHHHHhcCccccccc-ccccccceeeeeeCCCCcccccc--cccCCCCcEEECCCCCCCC-----c-hhhcCCCCCCEE
Confidence 3444555555554332 34556667777777777666553 5666777777777776653 1 133334444444
Q ss_pred cccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccc
Q 002149 184 SCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHF 263 (959)
Q Consensus 184 ~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l 263 (959)
++++|++++..+..|..+++|++|+|++|++++..+.. +.++++|++|+|++|++
T Consensus 91 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------------------------~~~l~~L~~L~L~~n~l 145 (272)
T 3rfs_A 91 ILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGV-------------------------FDKLTNLTYLNLAHNQL 145 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTT-------------------------TTTCTTCCEEECCSSCC
T ss_pred ECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHH-------------------------hccCCCCCEEECCCCcc
Confidence 44444444333444444445555555555444333332 23334444444444444
Q ss_pred cccCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhH
Q 002149 264 SGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVM 343 (959)
Q Consensus 264 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (959)
++..+..|..+++|++|+|++|++++.++..+
T Consensus 146 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~------------------------------------------------ 177 (272)
T 3rfs_A 146 QSLPKGVFDKLTNLTELDLSYNQLQSLPEGVF------------------------------------------------ 177 (272)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT------------------------------------------------
T ss_pred CccCHHHhccCccCCEEECCCCCcCccCHHHh------------------------------------------------
Confidence 44444444444444444444444443333222
Q ss_pred HHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCC
Q 002149 344 ALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTN 423 (959)
Q Consensus 344 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 423 (959)
+.+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.+.
T Consensus 178 ---------------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~---- 220 (272)
T 3rfs_A 178 ---------------------------------DKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT---- 220 (272)
T ss_dssp ---------------------------------TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC----
T ss_pred ---------------------------------cCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc----
Confidence 2346677777777777776676777788888888888877743
Q ss_pred ccCCCCCCeEeCCCCccCCCCCCCC
Q 002149 424 WTNLKSLTLLDLSQNNLSPPLPKFS 448 (959)
Q Consensus 424 l~~l~~L~~L~Ls~N~l~~~~p~~~ 448 (959)
+++|+.|+++.|.++|.+|...
T Consensus 221 ---~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 221 ---CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp ---TTTTHHHHHHHHHTGGGBBCTT
T ss_pred ---CcHHHHHHHHHHhCCCcccCcc
Confidence 4467888888888888887654
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.6e-23 Score=224.43 Aligned_cols=180 Identities=24% Similarity=0.320 Sum_probs=139.2
Q ss_pred ccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCcc
Q 002149 99 LNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSA 178 (959)
Q Consensus 99 l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~ 178 (959)
+..+++|+.|++++|.++. .+.+..+++|++|+|++|+++.++ .+..+++|++|+|++|.+++ ..+..+..++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~~~l~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~L~~n~l~~----~~~~~~~~l~ 109 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-VQGIQYLPNVRYLALGGNKLHDIS--ALKELTNLTYLILTGNQLQS----LPNGVFDKLT 109 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-CTTGGGCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECTTSCCCC----CCTTTTTTCT
T ss_pred cccccceeeeeeCCCCccc-ccccccCCCCcEEECCCCCCCCch--hhcCCCCCCEEECCCCccCc----cChhHhcCCc
Confidence 5667788888888888764 346777888888888888888764 57788888888888888874 2334467788
Q ss_pred ccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEc
Q 002149 179 QLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWL 258 (959)
Q Consensus 179 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L 258 (959)
+|++|++++|++++..+..|..+++|++|+|++|++++..+.. +.++++|++|+|
T Consensus 110 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------------------------~~~l~~L~~L~l 164 (272)
T 3rfs_A 110 NLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGV-------------------------FDKLTNLTELDL 164 (272)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT-------------------------TTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHH-------------------------hccCccCCEEEC
Confidence 8888888888888777778899999999999999998666654 456789999999
Q ss_pred cCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcC
Q 002149 259 HGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMF 310 (959)
Q Consensus 259 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l 310 (959)
++|++++..+..|..+++|++|+|++|++++.++..+..+ +|+.|+|++|.+
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 217 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCc
Confidence 9999998777888899999999999999998766555544 244444444443
No 327
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2e-23 Score=221.02 Aligned_cols=187 Identities=23% Similarity=0.340 Sum_probs=157.6
Q ss_pred CcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCC
Q 002149 71 WKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGL 149 (959)
Q Consensus 71 w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 149 (959)
|.|+.|.. ..+.+++++++++ .+|..+. ++|++|+|++|.+.+..+ .|.++++|++|+|++|+|+.+++..|.++
T Consensus 7 ~~gC~C~~-~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 82 (251)
T 3m19_A 7 VTGCTCNE-GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDL 82 (251)
T ss_dssp HHSSEEEG-GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC
T ss_pred CCceEcCC-CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccC
Confidence 88999953 3456899999998 6777665 689999999999999888 69999999999999999999999999999
Q ss_pred CCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCccc
Q 002149 150 ENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVN 229 (959)
Q Consensus 150 ~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~ 229 (959)
++|++|+|++|+|+. ..+..+..+++|++|+|++|++++..+..|..+++|+.|+|++|+|++..+..
T Consensus 83 ~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-------- 150 (251)
T 3m19_A 83 TELGTLGLANNQLAS----LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGA-------- 150 (251)
T ss_dssp TTCCEEECTTSCCCC----CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT--------
T ss_pred CcCCEEECCCCcccc----cChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHH--------
Confidence 999999999999985 23355678888888888888888777777888888888888888888666555
Q ss_pred ccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCC
Q 002149 230 LWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGL 290 (959)
Q Consensus 230 L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 290 (959)
+..+++|++|+|++|++++..+..|..+++|++|+|++|++...
T Consensus 151 -----------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 151 -----------------FDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp -----------------TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred -----------------cCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 45668888888888888877777888888888888888888866
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=9e-23 Score=220.42 Aligned_cols=203 Identities=22% Similarity=0.252 Sum_probs=128.2
Q ss_pred ccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCcc
Q 002149 99 LNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSA 178 (959)
Q Consensus 99 l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~ 178 (959)
+.++++|++|++++|.++.+++.+. ++|++|+|++|+|+.+++..|.++++|++|+|++|.|+.+ +
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-----~------- 71 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-----Q------- 71 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-----E-------
T ss_pred ccccCCccEEECCCCCCCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-----c-------
Confidence 5666777777777777776655543 5677777777777777777777777777777777766531 1
Q ss_pred ccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEc
Q 002149 179 QLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWL 258 (959)
Q Consensus 179 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L 258 (959)
. .+.+++|+.|+|++|+|+ .+|.. +..+++|++|+|
T Consensus 72 -----------------~-~~~l~~L~~L~Ls~N~l~-~l~~~-------------------------~~~l~~L~~L~l 107 (290)
T 1p9a_G 72 -----------------V-DGTLPVLGTLDLSHNQLQ-SLPLL-------------------------GQTLPALTVLDV 107 (290)
T ss_dssp -----------------C-CSCCTTCCEEECCSSCCS-SCCCC-------------------------TTTCTTCCEEEC
T ss_pred -----------------C-CCCCCcCCEEECCCCcCC-cCchh-------------------------hccCCCCCEEEC
Confidence 0 134556666666666665 33333 344566666666
Q ss_pred cCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCC
Q 002149 259 HGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPC 338 (959)
Q Consensus 259 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~ 338 (959)
++|+|++..|..|..+++|++|+|++|+|++.++..|..
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----------------------------------------- 146 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP----------------------------------------- 146 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTT-----------------------------------------
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhccc-----------------------------------------
Confidence 666666555566666666666666666666544433322
Q ss_pred chhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCccccccc
Q 002149 339 APEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISG 418 (959)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g 418 (959)
+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|+
T Consensus 147 ----------------------------------------l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~- 185 (290)
T 1p9a_G 147 ----------------------------------------TPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY- 185 (290)
T ss_dssp ----------------------------------------CTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-
T ss_pred ----------------------------------------ccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-
Confidence 245666666666666444455666777777777777777
Q ss_pred ccCCCccCCCCCCeEeCCCCccC
Q 002149 419 QIPTNWTNLKSLTLLDLSQNNLS 441 (959)
Q Consensus 419 ~~p~~l~~l~~L~~L~Ls~N~l~ 441 (959)
.+|..+..+.+|+.|+|++|++.
T Consensus 186 ~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 186 TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccChhhcccccCCeEEeCCCCcc
Confidence 66766666666666666655543
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=1.8e-22 Score=218.06 Aligned_cols=199 Identities=23% Similarity=0.223 Sum_probs=177.2
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
..++.|++.+++++ .+|..+. ++|+.|+|++|.|++..+ .|.++++|++|+|++|+|+.++.. ..+++|++|+|
T Consensus 10 ~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~L 84 (290)
T 1p9a_G 10 ASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDL 84 (290)
T ss_dssp TTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEEC
T ss_pred CCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEEC
Confidence 57889999999998 6777665 689999999999998877 699999999999999999998764 78999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCC
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKG 237 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~ 237 (959)
++|+|+ .+|..+..+++|++|++++|++++..+..|..+++|+.|+|++|+|++..+..
T Consensus 85 s~N~l~-----~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~---------------- 143 (290)
T 1p9a_G 85 SHNQLQ-----SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGL---------------- 143 (290)
T ss_dssp CSSCCS-----SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTT----------------
T ss_pred CCCcCC-----cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhh----------------
Confidence 999998 57888899999999999999999888899999999999999999999766655
Q ss_pred CCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCC
Q 002149 238 GGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMG 312 (959)
Q Consensus 238 ~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~ 312 (959)
|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|+..++..+...+|+.|+|++|++..
T Consensus 144 ---------~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 144 ---------LTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp ---------TTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ---------cccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccC
Confidence 456799999999999999766677889999999999999999665555555579999999999974
No 330
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=1.3e-22 Score=213.08 Aligned_cols=202 Identities=18% Similarity=0.284 Sum_probs=143.6
Q ss_pred cCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCC-CCCCChhhhcCCCCCcEEEccC-cccCCCCCCCC
Q 002149 94 TLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNN-FDTIPADFFDGLENLQVLALDS-NNFNASKGWSF 170 (959)
Q Consensus 94 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~-l~~i~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~l 170 (959)
.+|. +. ++|++|+|++|+|++.++ .|.++++|++|+|++|+ ++.+++..|.++++|++|+|++ |+++.
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~------ 95 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTY------ 95 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCE------
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeE------
Confidence 5565 43 378899999999988877 68888888888888886 8888888888888888888887 77653
Q ss_pred CccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCC
Q 002149 171 PKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNM 250 (959)
Q Consensus 171 p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l 250 (959)
..+..|.++++|++|+|++|++++ +|. | ..+
T Consensus 96 ----------------------i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~-------------------------~~l 126 (239)
T 2xwt_C 96 ----------------------IDPDALKELPLLKFLGIFNTGLKM-FPD-L-------------------------TKV 126 (239)
T ss_dssp ----------------------ECTTSEECCTTCCEEEEEEECCCS-CCC-C-------------------------TTC
T ss_pred ----------------------cCHHHhCCCCCCCEEeCCCCCCcc-ccc-c-------------------------ccc
Confidence 234456777788888888888775 443 3 233
Q ss_pred cCCc---EEEccCc-cccccCchhhcCCCCCC-EEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCcccccccccc
Q 002149 251 DQLR---TLWLHGN-HFSGTIPESFGKLTSLK-DLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSKAYKYSYS 325 (959)
Q Consensus 251 ~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~~~~~~~~ 325 (959)
++|+ +|+|++| ++++..+..|..+++|+ +|+|++|+++...+..+..
T Consensus 127 ~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~---------------------------- 178 (239)
T 2xwt_C 127 YSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG---------------------------- 178 (239)
T ss_dssp CBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT----------------------------
T ss_pred cccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC----------------------------
Confidence 4444 8888888 78766666777788888 8888888777433222221
Q ss_pred cCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCc-ccccCCccccCc-
Q 002149 326 SNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFN-LSGTLSPSVGNL- 403 (959)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~-l~~~~p~~~~~l- 403 (959)
++|+.|+|++|+ +++..+..|.++
T Consensus 179 ------------------------------------------------------~~L~~L~L~~n~~l~~i~~~~~~~l~ 204 (239)
T 2xwt_C 179 ------------------------------------------------------TKLDAVYLNKNKYLTVIDKDAFGGVY 204 (239)
T ss_dssp ------------------------------------------------------CEEEEEECTTCTTCCEECTTTTTTCS
T ss_pred ------------------------------------------------------CCCCEEEcCCCCCcccCCHHHhhccc
Confidence 456777777774 665556667777
Q ss_pred CcCCEEeCcccccccccCCCccCCCCCCeEeCCCC
Q 002149 404 DSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQN 438 (959)
Q Consensus 404 ~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N 438 (959)
++|+.|+|++|+|+ .+|.. .+++|+.|++++|
T Consensus 205 ~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 205 SGPSLLDVSQTSVT-ALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp BCCSEEECTTCCCC-CCCCT--TCTTCSEEECTTC
T ss_pred cCCcEEECCCCccc-cCChh--HhccCceeeccCc
Confidence 77888888888887 44544 5667777777765
No 331
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=3.5e-24 Score=237.57 Aligned_cols=184 Identities=15% Similarity=0.254 Sum_probs=123.4
Q ss_pred CcceEecCCcEEEEEecCCcccccCcccccCC--CCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCC-Chhhhc
Q 002149 71 WKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQL--SKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTI-PADFFD 147 (959)
Q Consensus 71 w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i-~~~~~~ 147 (959)
|.++.|+...++.++++++++. +..+..+ ++|+.|++++|.+.+.++.+.++++|++|+|++|.++.. .+..+.
T Consensus 39 W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~ 115 (336)
T 2ast_B 39 WYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILS 115 (336)
T ss_dssp HHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHT
T ss_pred HHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHh
Confidence 8888887777889999998877 5667777 899999999999999888888889999999999988754 455678
Q ss_pred CCCCCcEEEccCcccCCCCCCCCCccccCccccCeeccccc-ccCC-CCChhhcCCCCCCEEEecCC-cCCCC-CCcccc
Q 002149 148 GLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSC-NLAG-QLPDFLGNFASLQNLKLSGN-NLTGP-IPESFK 223 (959)
Q Consensus 148 ~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n-~l~~-~~p~~l~~l~~L~~L~Ls~N-~l~~~-~p~~~~ 223 (959)
.+++|++|+|++|.+++ ..+..+..+++|++|++++| .+++ .++..+..+++|++|+|++| .+++. ++..
T Consensus 116 ~~~~L~~L~L~~~~l~~----~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~-- 189 (336)
T 2ast_B 116 QCSKLQNLSLEGLRLSD----PIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA-- 189 (336)
T ss_dssp TBCCCSEEECTTCBCCH----HHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHH--
T ss_pred hCCCCCEEeCcCcccCH----HHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHH--
Confidence 88888888888887764 34445555566666666665 4443 24444555556666666655 55421 1111
Q ss_pred cCCcccccccccCCCCcccccccccCCc-CCcEEEccCc--ccc-ccCchhhcCCCCCCEEeCCCCc
Q 002149 224 GLNLVNLWLNDQKGGGFTGTIDVLGNMD-QLRTLWLHGN--HFS-GTIPESFGKLTSLKDLNLNSNQ 286 (959)
Q Consensus 224 ~l~l~~L~~~~~~~~~l~~~~~~l~~l~-~L~~L~L~~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~ 286 (959)
+..++ +|++|+|++| .++ +.+|..+..+++|++|+|++|.
T Consensus 190 -----------------------~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 233 (336)
T 2ast_B 190 -----------------------VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV 233 (336)
T ss_dssp -----------------------HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCT
T ss_pred -----------------------HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCC
Confidence 33345 5555555555 333 3345555555555555555555
No 332
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=2.7e-24 Score=240.81 Aligned_cols=81 Identities=14% Similarity=0.141 Sum_probs=48.5
Q ss_pred EEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-----CccCCC-CccEEecCCCCCCCCChhhhcCC-----CCC
Q 002149 84 IQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-----SFSGLS-NLKYAYLDGNNFDTIPADFFDGL-----ENL 152 (959)
Q Consensus 84 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-----~~~~l~-~L~~L~L~~N~l~~i~~~~~~~l-----~~L 152 (959)
.+++.++++|.+|..+...++|++|+|++|.|++..+ .|.+++ +|++|+|++|+|+......|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4556666666666666665566666666666665553 245555 56666666666666555545443 566
Q ss_pred cEEEccCcccCC
Q 002149 153 QVLALDSNNFNA 164 (959)
Q Consensus 153 ~~L~Ls~N~l~~ 164 (959)
++|+|++|+++.
T Consensus 83 ~~L~Ls~n~l~~ 94 (362)
T 3goz_A 83 TSLNLSGNFLSY 94 (362)
T ss_dssp CEEECCSSCGGG
T ss_pred cEEECcCCcCCh
Confidence 666666666553
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.3e-22 Score=213.00 Aligned_cols=197 Identities=17% Similarity=0.238 Sum_probs=171.1
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCc-CCCCCC-CccCCCCccEEecCC-CCCCCCChhhhcCCCCCcEE
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQ-FRGELP-SFSGLSNLKYAYLDG-NNFDTIPADFFDGLENLQVL 155 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~-l~~~~~-~~~~l~~L~~L~L~~-N~l~~i~~~~~~~l~~L~~L 155 (959)
..++.|+++++++++..+..+..+++|++|+|++|. ++.+++ .|.++++|++|+|++ |+|+.+++..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 479999999999997777789999999999999997 988887 699999999999999 99999999999999999999
Q ss_pred EccCcccCCCCCCCCCccccCccccC---eeccccc-ccCCCCChhhcCCCCCC-EEEecCCcCCCCCCcccccCCcccc
Q 002149 156 ALDSNNFNASKGWSFPKGLQSSAQLT---NLSCMSC-NLAGQLPDFLGNFASLQ-NLKLSGNNLTGPIPESFKGLNLVNL 230 (959)
Q Consensus 156 ~Ls~N~l~~~~~~~lp~~l~~l~~L~---~L~l~~n-~l~~~~p~~l~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~l~~L 230 (959)
+|++|++++ +|. +..+++|+ .|++++| ++.+..+..|.++++|+ .|++++|+++ .+|...
T Consensus 111 ~l~~n~l~~-----lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~-------- 175 (239)
T 2xwt_C 111 GIFNTGLKM-----FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYA-------- 175 (239)
T ss_dssp EEEEECCCS-----CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTT--------
T ss_pred eCCCCCCcc-----ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhh--------
Confidence 999999984 565 77888888 9999999 99988888899999999 9999999998 444431
Q ss_pred cccccCCCCcccccccccCCcCCcEEEccCcc-ccccCchhhcCC-CCCCEEeCCCCcCCCCCccccccccCCeEeCCCC
Q 002149 231 WLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNH-FSGTIPESFGKL-TSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNN 308 (959)
Q Consensus 231 ~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N 308 (959)
+.. ++|++|+|++|+ +++..+..|..+ ++|++|+|++|+|++.++..+. +|+.|+++++
T Consensus 176 ----------------~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~~~~--~L~~L~l~~~ 236 (239)
T 2xwt_C 176 ----------------FNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLE--HLKELIARNT 236 (239)
T ss_dssp ----------------TTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCTTCT--TCSEEECTTC
T ss_pred ----------------cCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChhHhc--cCceeeccCc
Confidence 233 789999999995 997777889999 9999999999999976555222 6889998876
Q ss_pred c
Q 002149 309 M 309 (959)
Q Consensus 309 ~ 309 (959)
.
T Consensus 237 ~ 237 (239)
T 2xwt_C 237 W 237 (239)
T ss_dssp -
T ss_pred c
Confidence 4
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=1e-22 Score=222.88 Aligned_cols=228 Identities=18% Similarity=0.130 Sum_probs=162.3
Q ss_pred CCccEEecCCCCCCCCCh---hhhcCCCCCcEEEccCcccCCCCCCCCCccc--cCccccCeecccccccCCCCC----h
Q 002149 126 SNLKYAYLDGNNFDTIPA---DFFDGLENLQVLALDSNNFNASKGWSFPKGL--QSSAQLTNLSCMSCNLAGQLP----D 196 (959)
Q Consensus 126 ~~L~~L~L~~N~l~~i~~---~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l--~~l~~L~~L~l~~n~l~~~~p----~ 196 (959)
..++.|.+.++.++...- ..+..+++|++|+|++|.+.+ ..|..+ ..+++|++|++++|++.+..+ .
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~----~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~ 139 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITG----TMPPLPLEATGLALSSLRLRNVSWATGRSWLAEL 139 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBS----CCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHH
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEecc----chhhhhhhccCCCCCEEEeecccccchhhhhHHH
Confidence 346666776666542110 012234567777777777765 445555 677777777777777776555 3
Q ss_pred hhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcccccc--Cc--hhhc
Q 002149 197 FLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGT--IP--ESFG 272 (959)
Q Consensus 197 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~--~p--~~~~ 272 (959)
.+..+++|++|+|++|++++..+.. +.++++|++|+|++|++.+. ++ ..+.
T Consensus 140 ~~~~~~~L~~L~Ls~n~l~~~~~~~-------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 194 (310)
T 4glp_A 140 QQWLKPGLKVLSIAQAHSPAFSCEQ-------------------------VRAFPALTSLDLSDNPGLGERGLMAALCPH 194 (310)
T ss_dssp HTTBCSCCCEEEEECCSSCCCCTTS-------------------------CCCCTTCCEEECCSCTTCHHHHHHTTSCTT
T ss_pred HhhhccCCCEEEeeCCCcchhhHHH-------------------------hccCCCCCEEECCCCCCccchhhhHHHhhh
Confidence 4557889999999999998776665 45678899999999988653 22 3346
Q ss_pred CCCCCCEEeCCCCcCCCCCcc---ccccc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhh
Q 002149 273 KLTSLKDLNLNSNQFVGLIPP---SLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDF 348 (959)
Q Consensus 273 ~l~~L~~L~Ls~N~l~~~~p~---~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (959)
.+++|++|+|++|+++...+. .+..+ +|++|+|++|++++.+|....
T Consensus 195 ~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~----------------------------- 245 (310)
T 4glp_A 195 KFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAP----------------------------- 245 (310)
T ss_dssp SSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCS-----------------------------
T ss_pred cCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHH-----------------------------
Confidence 788999999999998743221 23444 689999999999887664211
Q ss_pred ccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCC
Q 002149 349 LGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLK 428 (959)
Q Consensus 349 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~ 428 (959)
.+..+++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..++
T Consensus 246 --------------------------~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~ 294 (310)
T 4glp_A 246 --------------------------RCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELP 294 (310)
T ss_dssp --------------------------SCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCC
T ss_pred --------------------------hccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCC
Confidence 0112368999999999999 6777774 7999999999999953 44 68889
Q ss_pred CCCeEeCCCCccCC
Q 002149 429 SLTLLDLSQNNLSP 442 (959)
Q Consensus 429 ~L~~L~Ls~N~l~~ 442 (959)
+|+.|+|++|+|+.
T Consensus 295 ~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 295 EVDNLTLDGNPFLV 308 (310)
T ss_dssp CCSCEECSSTTTSC
T ss_pred CccEEECcCCCCCC
Confidence 99999999999874
No 335
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=1.1e-21 Score=214.03 Aligned_cols=61 Identities=16% Similarity=0.202 Sum_probs=39.9
Q ss_pred cCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccC
Q 002149 100 NQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFN 163 (959)
Q Consensus 100 ~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~ 163 (959)
.++++|++|++++|.+... +.+..+++|++|+|++|+++.+++ |..+++|++|+|++|+++
T Consensus 38 ~~l~~L~~L~l~~~~i~~l-~~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~ 98 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK 98 (308)
T ss_dssp HHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS
T ss_pred HHcCCcCEEEeeCCCccCc-hhhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCC
Confidence 3456666777777766643 356666667777777777666665 666666777777666665
No 336
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=9.1e-22 Score=219.07 Aligned_cols=240 Identities=19% Similarity=0.202 Sum_probs=142.1
Q ss_pred EEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCC-CCChhhhcCCCCCcE-EEccCc
Q 002149 84 IQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFD-TIPADFFDGLENLQV-LALDSN 160 (959)
Q Consensus 84 l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~-L~Ls~N 160 (959)
++.++++++ .+|..+ .++|++|+|++|+|+.+++ .|.++++|++|+|++|++. .+++.+|.++++|++ ++++.|
T Consensus 14 v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N 90 (350)
T 4ay9_X 14 FLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90 (350)
T ss_dssp EEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEET
T ss_pred EEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCC
Confidence 556666776 567655 2578888888888887776 5788888888888888874 467777777777664 455556
Q ss_pred ccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCc
Q 002149 161 NFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGF 240 (959)
Q Consensus 161 ~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l 240 (959)
+++. ..|..|..+++|++|++++|+++...+..+
T Consensus 91 ~l~~----------------------------l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~------------------ 124 (350)
T 4ay9_X 91 NLLY----------------------------INPEAFQNLPNLQYLLISNTGIKHLPDVHK------------------ 124 (350)
T ss_dssp TCCE----------------------------ECTTSBCCCTTCCEEEEEEECCSSCCCCTT------------------
T ss_pred cccc----------------------------cCchhhhhccccccccccccccccCCchhh------------------
Confidence 6653 334556666666666666666664443332
Q ss_pred ccccccccCCcCCcEEEccC-ccccccCchhhcCCC-CCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCccc
Q 002149 241 TGTIDVLGNMDQLRTLWLHG-NHFSGTIPESFGKLT-SLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSK 318 (959)
Q Consensus 241 ~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~ 318 (959)
....++..|++.+ |++....+..|..+. .++.|+|++|+|+.+.+..+...+|+.|++++|...+.+|..
T Consensus 125 -------~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~- 196 (350)
T 4ay9_X 125 -------IHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPND- 196 (350)
T ss_dssp -------CCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTT-
T ss_pred -------cccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHH-
Confidence 2234455666644 445544444555543 466666777766665555555556666666543333333321
Q ss_pred ccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCc
Q 002149 319 AYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSP 398 (959)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~ 398 (959)
.++.+++|+.|+|++|+|+...+.
T Consensus 197 --------------------------------------------------------~f~~l~~L~~LdLs~N~l~~lp~~ 220 (350)
T 4ay9_X 197 --------------------------------------------------------VFHGASGPVILDISRTRIHSLPSY 220 (350)
T ss_dssp --------------------------------------------------------TTTTEECCSEEECTTSCCCCCCSS
T ss_pred --------------------------------------------------------HhccCcccchhhcCCCCcCccChh
Confidence 123346677777777777644333
Q ss_pred cccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCcc
Q 002149 399 SVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNL 440 (959)
Q Consensus 399 ~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l 440 (959)
.+. +|+.|.+.++.-...+| .+.++++|+.++++++.-
T Consensus 221 ~~~---~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~~ 258 (350)
T 4ay9_X 221 GLE---NLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPSH 258 (350)
T ss_dssp SCT---TCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHHH
T ss_pred hhc---cchHhhhccCCCcCcCC-CchhCcChhhCcCCCCcc
Confidence 333 34444433333223556 366777777777766543
No 337
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=3e-22 Score=214.84 Aligned_cols=153 Identities=16% Similarity=0.074 Sum_probs=120.3
Q ss_pred HHHHhcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccH----------------HHHHHHHHHHHHHHhcCCC
Q 002149 606 LRNVTKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISK----------------KAVDEFHSEIAVLSKVRHR 669 (959)
Q Consensus 606 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~E~~~l~~l~h~ 669 (959)
+......|.+.+.||+|+||.||+|...+|+.||||++....... .....+.+|+++++.++
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-- 162 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-- 162 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence 333345677889999999999999988789999999986432111 23567899999999999
Q ss_pred CceeEEEEEEeCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEE
Q 002149 670 HLVSLLGYSVAGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNIL 749 (959)
Q Consensus 670 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiL 749 (959)
| +++.+++.. ...++||||+++|+|.+ +.. .....++.|++.||+|||+ .+|+||||||+|||
T Consensus 163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NIL 225 (282)
T 1zar_A 163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVL 225 (282)
T ss_dssp T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEE
T ss_pred C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEE
Confidence 4 556555433 45699999999999987 411 1245799999999999999 89999999999999
Q ss_pred ECCCCcEEEeeccccccCCCCCcceeecccccccccccccccc
Q 002149 750 LGDDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVT 792 (959)
Q Consensus 750 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 792 (959)
++ ++.+||+|||+|+. +..|+|||++..
T Consensus 226 l~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~r 253 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVE--------------VGEEGWREILER 253 (282)
T ss_dssp EE-TTEEEECCCTTCEE--------------TTSTTHHHHHHH
T ss_pred EE-CCcEEEEECCCCeE--------------CCCCCHHHHHHH
Confidence 99 99999999999863 345788887643
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=3.6e-24 Score=242.21 Aligned_cols=249 Identities=22% Similarity=0.270 Sum_probs=156.4
Q ss_pred cCcccccCCCCCcEEeccCCcCCCCCC-----CccCCCCccEEecCCCCCCCC----Chhh------hcCCCCCcEEEcc
Q 002149 94 TLPQNLNQLSKLENIGLQKNQFRGELP-----SFSGLSNLKYAYLDGNNFDTI----PADF------FDGLENLQVLALD 158 (959)
Q Consensus 94 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~-----~~~~l~~L~~L~L~~N~l~~i----~~~~------~~~l~~L~~L~Ls 158 (959)
.++..+..+++|++|+|++|.|+...+ .|..+++|++|+|++|.+..+ |... |..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 455566666777777777777665422 255666666666666554432 2211 2455566666666
Q ss_pred CcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCC
Q 002149 159 SNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGG 238 (959)
Q Consensus 159 ~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~ 238 (959)
+|.|...... .+|..+..+++|++|+|++|.++...+..+...
T Consensus 103 ~n~l~~~~~~------------------------~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~------------- 145 (386)
T 2ca6_A 103 DNAFGPTAQE------------------------PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA------------- 145 (386)
T ss_dssp SCCCCTTTHH------------------------HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH-------------
T ss_pred CCcCCHHHHH------------------------HHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH-------------
Confidence 5555431111 245566667777777777777653333222110
Q ss_pred CcccccccccCC---------cCCcEEEccCcccc-ccCc---hhhcCCCCCCEEeCCCCcCC--C---CCccccccc-c
Q 002149 239 GFTGTIDVLGNM---------DQLRTLWLHGNHFS-GTIP---ESFGKLTSLKDLNLNSNQFV--G---LIPPSLASL-S 299 (959)
Q Consensus 239 ~l~~~~~~l~~l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~~-~ 299 (959)
+..+ ++|++|+|++|+++ +.+| ..+..+++|++|+|++|+|+ | ..+..+..+ +
T Consensus 146 --------l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~ 217 (386)
T 2ca6_A 146 --------LQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQE 217 (386)
T ss_dssp --------HHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTT
T ss_pred --------HHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCC
Confidence 1222 67777777777776 3444 45667777777777777776 2 233344444 5
Q ss_pred CCeEeCCCCcCCC----CCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccc
Q 002149 300 LDHLDLNNNMFMG----PVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLS 375 (959)
Q Consensus 300 L~~L~L~~N~l~~----~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 375 (959)
|+.|+|++|.++. .+|. .
T Consensus 218 L~~L~Ls~n~l~~~g~~~l~~----------------------------------------------------------~ 239 (386)
T 2ca6_A 218 LKVLDLQDNTFTHLGSSALAI----------------------------------------------------------A 239 (386)
T ss_dssp CCEEECCSSCCHHHHHHHHHH----------------------------------------------------------H
T ss_pred ccEEECcCCCCCcHHHHHHHH----------------------------------------------------------H
Confidence 7777777777752 1111 1
Q ss_pred cCCCCcccEEECCCCccccc----CCccc--cCcCcCCEEeCccccccc----ccCCCc-cCCCCCCeEeCCCCccCCCC
Q 002149 376 CGTNSKLTVLNLPNFNLSGT----LSPSV--GNLDSLTQIKLQSNNISG----QIPTNW-TNLKSLTLLDLSQNNLSPPL 444 (959)
Q Consensus 376 ~~~~~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~g----~~p~~l-~~l~~L~~L~Ls~N~l~~~~ 444 (959)
+..+++|+.|+|++|+|++. ++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|++++..
T Consensus 240 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 22347788899999988876 56666 348999999999999997 488777 66899999999999998765
Q ss_pred C
Q 002149 445 P 445 (959)
Q Consensus 445 p 445 (959)
+
T Consensus 320 ~ 320 (386)
T 2ca6_A 320 D 320 (386)
T ss_dssp H
T ss_pred h
Confidence 4
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=6e-22 Score=216.69 Aligned_cols=205 Identities=18% Similarity=0.193 Sum_probs=167.5
Q ss_pred cEEEEEecCCcccccCcccc--cCCCCCcEEeccCCcCCCCCCC-----ccCCCCccEEecCCCCCCCCChhhhcCCCCC
Q 002149 80 RVTQIQVSSVGLKGTLPQNL--NQLSKLENIGLQKNQFRGELPS-----FSGLSNLKYAYLDGNNFDTIPADFFDGLENL 152 (959)
Q Consensus 80 ~v~~l~l~~~~l~g~~~~~l--~~l~~L~~L~Ls~N~l~~~~~~-----~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 152 (959)
+++.|++++|.+++.+|..+ ..+++|++|+|++|.+++..+. +..+++|++|+|++|+|..+++..|..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 48999999999999999888 8999999999999999986552 4578999999999999999999999999999
Q ss_pred cEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCCh----hhcCCCCCCEEEecCCcCCCCCCcccccCCcc
Q 002149 153 QVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPD----FLGNFASLQNLKLSGNNLTGPIPESFKGLNLV 228 (959)
Q Consensus 153 ~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~----~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~ 228 (959)
++|+|++|++.+......+..+..+++|++|++++|+++. ++. .+..+++|++|+|++|++++..|..+..
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~---- 246 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPR---- 246 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSS----
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHh----
Confidence 9999999987642111223334688899999999999973 232 3578899999999999999887776532
Q ss_pred cccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCC
Q 002149 229 NLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNN 307 (959)
Q Consensus 229 ~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~ 307 (959)
+..+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+ +|+.|+|++
T Consensus 247 ------------------~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~ 303 (310)
T 4glp_A 247 ------------------CMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDG 303 (310)
T ss_dssp ------------------CCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSS
T ss_pred ------------------ccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcC
Confidence 233479999999999999 6787774 7999999999999975 33 4444 699999999
Q ss_pred CcCCC
Q 002149 308 NMFMG 312 (959)
Q Consensus 308 N~l~~ 312 (959)
|+++.
T Consensus 304 N~l~~ 308 (310)
T 4glp_A 304 NPFLV 308 (310)
T ss_dssp TTTSC
T ss_pred CCCCC
Confidence 99975
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=9.4e-21 Score=200.34 Aligned_cols=181 Identities=22% Similarity=0.295 Sum_probs=162.6
Q ss_pred CCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCe
Q 002149 103 SKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTN 182 (959)
Q Consensus 103 ~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~ 182 (959)
...++++++++.++..++.+. ++|++|+|++|+|+.+++..|.++++|++|+|++|+|++ ..+..+..+++|+.
T Consensus 14 ~~~~~l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~ 87 (251)
T 3m19_A 14 EGKKEVDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT----LSAGVFDDLTELGT 87 (251)
T ss_dssp GGGTEEECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC----CCTTTTTTCTTCCE
T ss_pred CCCeEEecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCc----cCHhHhccCCcCCE
Confidence 456789999999998777665 689999999999999999999999999999999999986 34556789999999
Q ss_pred ecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcc
Q 002149 183 LSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNH 262 (959)
Q Consensus 183 L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~ 262 (959)
|++++|++++..+..|..+++|++|+|++|+|++..+.. +..+++|++|+|++|+
T Consensus 88 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-------------------------~~~l~~L~~L~Ls~N~ 142 (251)
T 3m19_A 88 LGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGV-------------------------FDRLTKLKELRLNTNQ 142 (251)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT-------------------------TTTCTTCCEEECCSSC
T ss_pred EECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhH-------------------------hccCCcccEEECcCCc
Confidence 999999999888889999999999999999999666654 4667999999999999
Q ss_pred ccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCC
Q 002149 263 FSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPV 314 (959)
Q Consensus 263 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~i 314 (959)
|++..+..|..+++|++|+|++|+|++.++..+..+ +|+.|+|++|++++..
T Consensus 143 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 143 LQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred CCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 997777789999999999999999999888888887 6999999999998753
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=3.7e-21 Score=209.83 Aligned_cols=212 Identities=23% Similarity=0.329 Sum_probs=122.2
Q ss_pred cEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecc
Q 002149 106 ENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSC 185 (959)
Q Consensus 106 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l 185 (959)
..+.+..+.++... .+..+++|++|++++|+++.++ .+..+++|++|+|++|+++. ++. +..+++|+.|++
T Consensus 22 ~~~~l~~~~~~~~~-~~~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~-----~~~-~~~l~~L~~L~L 92 (308)
T 1h6u_A 22 IKIAAGKSNVTDTV-TQADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITD-----LAP-LKNLTKITELEL 92 (308)
T ss_dssp HHHHTTCSSTTSEE-CHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC-----CGG-GTTCCSCCEEEC
T ss_pred HHHHhCCCCcCcee-cHHHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCC-----Chh-HccCCCCCEEEc
Confidence 33445556555432 3556778888888888888876 37788888888888887763 222 445555555555
Q ss_pred cccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccc
Q 002149 186 MSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSG 265 (959)
Q Consensus 186 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~ 265 (959)
++|++.+. ..+..+++|++|+|++|++++. +. +..+++|++|+|++|++++
T Consensus 93 ~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~--------------------------l~~l~~L~~L~l~~n~l~~ 143 (308)
T 1h6u_A 93 SGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-TP--------------------------LAGLSNLQVLYLDLNQITN 143 (308)
T ss_dssp CSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-GG--------------------------GTTCTTCCEEECCSSCCCC
T ss_pred cCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-hh--------------------------hcCCCCCCEEECCCCccCc
Confidence 55554432 2344455555555555554431 11 2333445555555555443
Q ss_pred cCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHH
Q 002149 266 TIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMAL 345 (959)
Q Consensus 266 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (959)
..+ +..+++|++|+|++|++++..+ +
T Consensus 144 ~~~--l~~l~~L~~L~l~~n~l~~~~~--l-------------------------------------------------- 169 (308)
T 1h6u_A 144 ISP--LAGLTNLQYLSIGNAQVSDLTP--L-------------------------------------------------- 169 (308)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--G--------------------------------------------------
T ss_pred Ccc--ccCCCCccEEEccCCcCCCChh--h--------------------------------------------------
Confidence 222 4444444444444444443221 2
Q ss_pred HhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCcc
Q 002149 346 IDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWT 425 (959)
Q Consensus 346 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~ 425 (959)
..+++|+.|+|++|++++..+ +..+++|++|+|++|++++.. .+.
T Consensus 170 -------------------------------~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~ 214 (308)
T 1h6u_A 170 -------------------------------ANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLA 214 (308)
T ss_dssp -------------------------------TTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGT
T ss_pred -------------------------------cCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--ccc
Confidence 233567777777777764433 667777777777777777543 267
Q ss_pred CCCCCCeEeCCCCccCCCC
Q 002149 426 NLKSLTLLDLSQNNLSPPL 444 (959)
Q Consensus 426 ~l~~L~~L~Ls~N~l~~~~ 444 (959)
.+++|+.|+|++|++++..
T Consensus 215 ~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 215 NTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp TCTTCCEEEEEEEEEECCC
T ss_pred CCCCCCEEEccCCeeecCC
Confidence 7777777777777776533
No 342
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=5.4e-21 Score=196.03 Aligned_cols=179 Identities=21% Similarity=0.361 Sum_probs=149.1
Q ss_pred CcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCC
Q 002149 71 WKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGL 149 (959)
Q Consensus 71 w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 149 (959)
|.+|.|+..+ ++ .+|..+ .++|++|+|++|++++.++ .|.++++|++|+|++|+|+.+++..|..+
T Consensus 9 ~~~v~c~~~~----------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 75 (208)
T 2o6s_A 9 GTTVECYSQG----------RT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKL 75 (208)
T ss_dssp TTEEECCSSC----------CS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTC
T ss_pred CCEEEecCCC----------cc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCC
Confidence 6666666544 33 344443 3589999999999998877 47899999999999999999999999999
Q ss_pred CCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCccc
Q 002149 150 ENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVN 229 (959)
Q Consensus 150 ~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~ 229 (959)
++|++|+|++|+++.+ .+..+..+++|++|++++|++++..+..|..+++|+.|+|++|++++..+..
T Consensus 76 ~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-------- 143 (208)
T 2o6s_A 76 TSLTYLNLSTNQLQSL----PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGV-------- 143 (208)
T ss_dssp TTCCEEECCSSCCCCC----CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT--------
T ss_pred CCcCEEECCCCcCCcc----CHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHH--------
Confidence 9999999999999852 2344688999999999999999888888999999999999999999766554
Q ss_pred ccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc
Q 002149 230 LWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL 298 (959)
Q Consensus 230 L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 298 (959)
+..+++|++|+|++|.+.+ .+++|++|+++.|+++|.+|..++.+
T Consensus 144 -----------------~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 144 -----------------FDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp -----------------TTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred -----------------hccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 4567899999999998875 35688999999999999999888765
No 343
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.85 E-value=1e-22 Score=228.04 Aligned_cols=265 Identities=20% Similarity=0.235 Sum_probs=202.0
Q ss_pred EEeccCCcCCCCCCCccC-CCCccEEecCCCCCCCCCh----hhhcCCC-CCcEEEccCcccCCCCCCCCCccccCc-cc
Q 002149 107 NIGLQKNQFRGELPSFSG-LSNLKYAYLDGNNFDTIPA----DFFDGLE-NLQVLALDSNNFNASKGWSFPKGLQSS-AQ 179 (959)
Q Consensus 107 ~L~Ls~N~l~~~~~~~~~-l~~L~~L~L~~N~l~~i~~----~~~~~l~-~L~~L~Ls~N~l~~~~~~~lp~~l~~l-~~ 179 (959)
+++|+.|.+++.+|.+.. .++|++|+|++|+|+.++. ..|..++ +|++|+|++|.|+......+...+... ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 578999999999987655 4559999999999999998 8899999 999999999999863322222222332 89
Q ss_pred cCeecccccccCCCCChhhcC----C-CCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccC-CcCC
Q 002149 180 LTNLSCMSCNLAGQLPDFLGN----F-ASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGN-MDQL 253 (959)
Q Consensus 180 L~~L~l~~n~l~~~~p~~l~~----l-~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~-l~~L 253 (959)
|++|++++|++++..+..+.. + ++|++|+|++|++++..+..+.. .+.. .++|
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~---------------------~l~~~~~~L 140 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ---------------------AFSNLPASI 140 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH---------------------HHTTSCTTC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH---------------------HHHhCCCce
Confidence 999999999999887775544 4 89999999999998766654421 1344 3689
Q ss_pred cEEEccCcccccc----CchhhcCCC-CCCEEeCCCCcCCCCCccccccc------cCCeEeCCCCcCCCCCCccccccc
Q 002149 254 RTLWLHGNHFSGT----IPESFGKLT-SLKDLNLNSNQFVGLIPPSLASL------SLDHLDLNNNMFMGPVPKSKAYKY 322 (959)
Q Consensus 254 ~~L~L~~N~l~~~----~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~------~L~~L~L~~N~l~~~ip~~~~~~~ 322 (959)
++|+|++|++++. ++..+..++ +|++|+|++|+|++..+..+... +|+.|+|++|.+++....
T Consensus 141 ~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~------ 214 (362)
T 3goz_A 141 TSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYA------ 214 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH------
T ss_pred eEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHH------
Confidence 9999999999864 445556666 99999999999998887655532 699999999999752111
Q ss_pred ccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCC----c
Q 002149 323 SYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLS----P 398 (959)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p----~ 398 (959)
.+...+. ...++|+.|+|++|+|++..+ .
T Consensus 215 ---------------------~l~~~l~--------------------------~~~~~L~~L~Ls~N~l~~~~~~~l~~ 247 (362)
T 3goz_A 215 ---------------------ELAYIFS--------------------------SIPNHVVSLNLCLNCLHGPSLENLKL 247 (362)
T ss_dssp ---------------------HHHHHHH--------------------------HSCTTCCEEECCSSCCCCCCHHHHHH
T ss_pred ---------------------HHHHHHh--------------------------cCCCCceEEECcCCCCCcHHHHHHHH
Confidence 0000000 012589999999999997655 4
Q ss_pred cccCcCcCCEEeCccccccc-------ccCCCccCCCCCCeEeCCCCccCCCCC
Q 002149 399 SVGNLDSLTQIKLQSNNISG-------QIPTNWTNLKSLTLLDLSQNNLSPPLP 445 (959)
Q Consensus 399 ~~~~l~~L~~L~L~~N~l~g-------~~p~~l~~l~~L~~L~Ls~N~l~~~~p 445 (959)
.+..+++|+.|+|++|.+.+ .++..+.++++|+.|||++|++.+..+
T Consensus 248 ~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 248 LKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp TTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 45778999999999999543 345678899999999999999986543
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=2.2e-23 Score=235.72 Aligned_cols=255 Identities=22% Similarity=0.269 Sum_probs=182.3
Q ss_pred CCcEEEEEecCCcccccC----cccccCCCCCcEEeccCCcCC---CCCC-C-------ccCCCCccEEecCCCCCCC--
Q 002149 78 NSRVTQIQVSSVGLKGTL----PQNLNQLSKLENIGLQKNQFR---GELP-S-------FSGLSNLKYAYLDGNNFDT-- 140 (959)
Q Consensus 78 ~~~v~~l~l~~~~l~g~~----~~~l~~l~~L~~L~Ls~N~l~---~~~~-~-------~~~l~~L~~L~L~~N~l~~-- 140 (959)
..+++.|+|++|++++.. +..+..+++|++|+|++|.+. +.+| . |.++++|++|+|++|+|+.
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 357999999999998764 445789999999999997544 4444 2 3789999999999999997
Q ss_pred --CChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCC-C
Q 002149 141 --IPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTG-P 217 (959)
Q Consensus 141 --i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~ 217 (959)
..+..+..+++|++|+|++|.|+......++..+..+ ..+++. +..++|++|+|++|+++. .
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l--------~~~~~~-------~~~~~L~~L~L~~n~l~~~~ 175 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQEL--------AVNKKA-------KNAPPLRSIICGRNRLENGS 175 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHH--------HHHHHH-------HTCCCCCEEECCSSCCTGGG
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHH--------hhhhhc-------ccCCCCcEEECCCCCCCcHH
Confidence 3455688999999999999988642111111111111 011111 111789999999999872 2
Q ss_pred CCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcccc--c---cCchhhcCCCCCCEEeCCCCcCC----
Q 002149 218 IPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFS--G---TIPESFGKLTSLKDLNLNSNQFV---- 288 (959)
Q Consensus 218 ~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~---- 288 (959)
++. + ...+..+++|++|+|++|+++ | .+|..+..+++|++|+|++|.|+
T Consensus 176 ~~~-l---------------------~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~ 233 (386)
T 2ca6_A 176 MKE-W---------------------AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGS 233 (386)
T ss_dssp HHH-H---------------------HHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHH
T ss_pred HHH-H---------------------HHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHH
Confidence 221 1 012556789999999999998 3 35558889999999999999996
Q ss_pred CCCccccccc-cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCC
Q 002149 289 GLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDP 367 (959)
Q Consensus 289 ~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 367 (959)
+.+|..+..+ +|+.|+|++|.+++.... .+...
T Consensus 234 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~---------------------------~l~~~------------------- 267 (386)
T 2ca6_A 234 SALAIALKSWPNLRELGLNDCLLSARGAA---------------------------AVVDA------------------- 267 (386)
T ss_dssp HHHHHHGGGCTTCCEEECTTCCCCHHHHH---------------------------HHHHH-------------------
T ss_pred HHHHHHHccCCCcCEEECCCCCCchhhHH---------------------------HHHHH-------------------
Confidence 5567777766 699999999998742110 00000
Q ss_pred CCcccccccCCCCcccEEECCCCcccc----cCCccc-cCcCcCCEEeCcccccccccC
Q 002149 368 CKSWLGLSCGTNSKLTVLNLPNFNLSG----TLSPSV-GNLDSLTQIKLQSNNISGQIP 421 (959)
Q Consensus 368 ~~~~~~~~~~~~~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~g~~p 421 (959)
+..+.+++|+.|+|++|.|++ .+|..+ .++++|++|+|++|.+++..+
T Consensus 268 ------l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 268 ------FSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp ------HHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred ------HhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 011235889999999999998 488877 678999999999999997654
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=4.3e-21 Score=224.49 Aligned_cols=205 Identities=22% Similarity=0.331 Sum_probs=167.4
Q ss_pred CCCCCCCCCCCCCC--CCcce-EecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEe
Q 002149 56 LLQWPKSGDPCGPP--CWKHV-FCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAY 132 (959)
Q Consensus 56 ~~~w~~~~~~C~~~--~w~gv-~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~ 132 (959)
+.+|....++|... .|.++ .|..++++.|+|+++++++ +|..+. ++|++|+|++|+|+.++ ..+++|++|+
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~ip---~~l~~L~~L~ 106 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALISLP---ELPASLEYLD 106 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSCCC---CCCTTCCEEE
T ss_pred HHHHhccCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcccc---cccCCCCEEE
Confidence 34565566777421 38888 7988899999999999997 787764 89999999999999554 5689999999
Q ss_pred cCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCC
Q 002149 133 LDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGN 212 (959)
Q Consensus 133 L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N 212 (959)
|++|+|+.+|. |.+ +|++|+|++|+|++ +|. .+++|+.|++++|++++ +|. .+++|+.|+|++|
T Consensus 107 Ls~N~l~~ip~--l~~--~L~~L~Ls~N~l~~-----lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N 170 (571)
T 3cvr_A 107 ACDNRLSTLPE--LPA--SLKHLDVDNNQLTM-----LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNN 170 (571)
T ss_dssp CCSSCCSCCCC--CCT--TCCEEECCSSCCSC-----CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSS
T ss_pred ccCCCCCCcch--hhc--CCCEEECCCCcCCC-----CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCC
Confidence 99999999887 554 99999999999985 555 67899999999999997 565 5789999999999
Q ss_pred cCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCC-------CEEeCCCC
Q 002149 213 NLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSL-------KDLNLNSN 285 (959)
Q Consensus 213 ~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------~~L~Ls~N 285 (959)
+|++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|
T Consensus 171 ~L~~-lp~-l~---------------------------~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N 217 (571)
T 3cvr_A 171 QLTF-LPE-LP---------------------------ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCREN 217 (571)
T ss_dssp CCSC-CCC-CC---------------------------TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSS
T ss_pred CCCC-cch-hh---------------------------CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCC
Confidence 9996 554 41 68999999999999 6777 554 77 99999999
Q ss_pred cCCCCCccccccc-cCCeEeCCCCcCCCCCCc
Q 002149 286 QFVGLIPPSLASL-SLDHLDLNNNMFMGPVPK 316 (959)
Q Consensus 286 ~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~ 316 (959)
+|+. +|..+..+ +|+.|+|++|++++.+|.
T Consensus 218 ~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 218 RITH-IPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp CCCC-CCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred ccee-cCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 9996 45555556 699999999999987765
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=1.3e-20 Score=220.33 Aligned_cols=196 Identities=21% Similarity=0.332 Sum_probs=115.9
Q ss_pred CCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCee
Q 002149 104 KLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNL 183 (959)
Q Consensus 104 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L 183 (959)
+|+.|+|++|+|+++++.+. ++|++|+|++|+|+.+| ..+++|++|+|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~--~~L~~L~Ls~N~l~~ip----~~l~~L~~L~Ls~N~l~-------------------- 113 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP--PQITVLEITQNALISLP----ELPASLEYLDACDNRLS-------------------- 113 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS--------------------
T ss_pred CccEEEeCCCCCCccCHhHc--CCCCEEECcCCCCcccc----cccCCCCEEEccCCCCC--------------------
Confidence 55666666666655433332 45666666666665555 23455555555555554
Q ss_pred cccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccc
Q 002149 184 SCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHF 263 (959)
Q Consensus 184 ~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l 263 (959)
+ +|. +.+ +|+.|+|++|+|++ +|. .+++|++|+|++|+|
T Consensus 114 --------~-ip~-l~~--~L~~L~Ls~N~l~~-lp~----------------------------~l~~L~~L~Ls~N~l 152 (571)
T 3cvr_A 114 --------T-LPE-LPA--SLKHLDVDNNQLTM-LPE----------------------------LPALLEYINADNNQL 152 (571)
T ss_dssp --------C-CCC-CCT--TCCEEECCSSCCSC-CCC----------------------------CCTTCCEEECCSSCC
T ss_pred --------C-cch-hhc--CCCEEECCCCcCCC-CCC----------------------------cCccccEEeCCCCcc
Confidence 3 333 332 56666666666654 332 124566666666666
Q ss_pred cccCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhH
Q 002149 264 SGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVM 343 (959)
Q Consensus 264 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (959)
++ +|. .+++|++|+|++|+|++ +|. +. .+|+.|+|++|.|+ .+|. +...
T Consensus 153 ~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~-~~L~~L~Ls~N~L~-~lp~-~~~~---------------------- 201 (571)
T 3cvr_A 153 TM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP-ESLEALDVSTNLLE-SLPA-VPVR---------------------- 201 (571)
T ss_dssp SC-CCC---CCTTCCEEECCSSCCSC-CCC-CC-TTCCEEECCSSCCS-SCCC-CC------------------------
T ss_pred Cc-CCC---cCCCcCEEECCCCCCCC-cch-hh-CCCCEEECcCCCCC-chhh-HHHh----------------------
Confidence 64 444 35566666666666665 333 43 45666666666665 3332 0000
Q ss_pred HHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCC
Q 002149 344 ALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTN 423 (959)
Q Consensus 344 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 423 (959)
-+.....|+.|+|++|+|+ .+|..+.++++|+.|+|++|.|++.+|..
T Consensus 202 -------------------------------L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 202 -------------------------------NHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp -------------------------------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred -------------------------------hhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 0011244688999999988 57888888999999999999999888888
Q ss_pred ccCCCC
Q 002149 424 WTNLKS 429 (959)
Q Consensus 424 l~~l~~ 429 (959)
|..++.
T Consensus 250 l~~l~~ 255 (571)
T 3cvr_A 250 LSQQTA 255 (571)
T ss_dssp HHHHHH
T ss_pred HHHhhc
Confidence 777654
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=3e-20 Score=206.78 Aligned_cols=241 Identities=17% Similarity=0.128 Sum_probs=177.1
Q ss_pred cEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecc
Q 002149 106 ENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSC 185 (959)
Q Consensus 106 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l 185 (959)
++++.++|+++.+|..+ .+++++|+|++|+|+.|++++|.++++|++|+|++|++... +
T Consensus 12 ~~v~C~~~~Lt~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~----i--------------- 70 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEV----I--------------- 70 (350)
T ss_dssp TEEEEESTTCCSCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCE----E---------------
T ss_pred CEEEecCCCCCccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCc----c---------------
Confidence 46788899998776655 36799999999999999999999999999999999987531 1
Q ss_pred cccccCCCCChhhcCCCCCCE-EEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcccc
Q 002149 186 MSCNLAGQLPDFLGNFASLQN-LKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFS 264 (959)
Q Consensus 186 ~~n~l~~~~p~~l~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~ 264 (959)
.+..|.++++|.+ +.+++|+|+...|.. |.++++|++|++++|+++
T Consensus 71 --------~~~~f~~L~~l~~~l~~~~N~l~~l~~~~-------------------------f~~l~~L~~L~l~~n~l~ 117 (350)
T 4ay9_X 71 --------EADVFSNLPKLHEIRIEKANNLLYINPEA-------------------------FQNLPNLQYLLISNTGIK 117 (350)
T ss_dssp --------CTTSBCSCTTCCEEEEEEETTCCEECTTS-------------------------BCCCTTCCEEEEEEECCS
T ss_pred --------ChhHhhcchhhhhhhcccCCcccccCchh-------------------------hhhccccccccccccccc
Confidence 1345677887765 667789999777766 567799999999999999
Q ss_pred ccCchhhcCCCCCCEEeCCC-CcCCCCCccccccc--cCCeEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchh
Q 002149 265 GTIPESFGKLTSLKDLNLNS-NQFVGLIPPSLASL--SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPE 341 (959)
Q Consensus 265 ~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~~--~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (959)
+..+..+....++..|++.+ |++....+..|..+ .++.|+|++|.++. +|..
T Consensus 118 ~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~------------------------ 172 (350)
T 4ay9_X 118 HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNS------------------------ 172 (350)
T ss_dssp SCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTT------------------------
T ss_pred cCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChh------------------------
Confidence 77777777888899999965 67887777777776 48899999999974 2221
Q ss_pred hHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCC-CcccccCCccccCcCcCCEEeCccccccccc
Q 002149 342 VMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPN-FNLSGTLSPSVGNLDSLTQIKLQSNNISGQI 420 (959)
Q Consensus 342 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~ 420 (959)
.....+|+.|++++ |.++...+..|.++++|++|+|++|+|+...
T Consensus 173 ----------------------------------~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp 218 (350)
T 4ay9_X 173 ----------------------------------AFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLP 218 (350)
T ss_dssp ----------------------------------SSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCC
T ss_pred ----------------------------------hccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccC
Confidence 01236799999986 5565444457899999999999999999443
Q ss_pred CCCccCCCCCCeEeCCCCccCCCCCC---CCCcceecccCCCCCCC
Q 002149 421 PTNWTNLKSLTLLDLSQNNLSPPLPK---FSGAVKLSLDGNPLLNG 463 (959)
Q Consensus 421 p~~l~~l~~L~~L~Ls~N~l~~~~p~---~~~~~~~~l~~N~~~c~ 463 (959)
+..|.+|++ |.+.++.-...+|. +.++..+.+. |++.|.
T Consensus 219 ~~~~~~L~~---L~~l~~~~l~~lP~l~~l~~L~~l~l~-~~~~c~ 260 (350)
T 4ay9_X 219 SYGLENLKK---LRARSTYNLKKLPTLEKLVALMEASLT-YPSHCC 260 (350)
T ss_dssp SSSCTTCCE---EECTTCTTCCCCCCTTTCCSCCEEECS-CHHHHH
T ss_pred hhhhccchH---hhhccCCCcCcCCCchhCcChhhCcCC-CCcccc
Confidence 344555554 44444433334454 5556666664 555553
No 348
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=2.3e-21 Score=235.47 Aligned_cols=225 Identities=22% Similarity=0.223 Sum_probs=128.3
Q ss_pred ChhhHHHHHHHHHhcCCC---CCCCCCCCCCCCCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCC
Q 002149 37 DPGDIDILNQFRKNLENP---ELLQWPKSGDPCGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKN 113 (959)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~---~~~~w~~~~~~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N 113 (959)
...++++|.++..+..-. ....|.....++. .|.++.++..+++.++|.++++.. ++.. .|+.++|+.|
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~l~L~~n~~~~-~~~~-----~l~~l~Ls~~ 201 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSG--TATNSAVSTPLTPKIELFANGKDE-ANQA-----LLQHKKLSQY 201 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccc--cCCCceecCCccceEEeeCCCCCc-chhh-----HhhcCccCcc
Confidence 345678898888776321 2344643333333 388999999999999999988875 3332 3456667777
Q ss_pred cCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCC
Q 002149 114 QFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQ 193 (959)
Q Consensus 114 ~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~ 193 (959)
.|.+ ++++.|++. +++..|..+++|+.|+|++|.|. .+|..+..+++|+.|+|++|+|+ .
T Consensus 202 ~i~~-------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-----~l~~~~~~l~~L~~L~Ls~N~l~-~ 261 (727)
T 4b8c_D 202 SIDE-------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-----NISANIFKYDFLTRLYLNGNSLT-E 261 (727)
T ss_dssp ----------------------------------CCCCCCEEECTTSCCS-----CCCGGGGGCCSCSCCBCTTSCCS-C
T ss_pred cccC-------------cccccccee-cChhhhccCCCCcEEECCCCCCC-----CCChhhcCCCCCCEEEeeCCcCc-c
Confidence 6553 355566665 55667888888888888888887 57777788888888888888888 7
Q ss_pred CChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcC
Q 002149 194 LPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGK 273 (959)
Q Consensus 194 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 273 (959)
+|..|+++++|+.|+|++|+|+ .+|.. ++++++|++|+|++|.|+ .+|..|+.
T Consensus 262 lp~~~~~l~~L~~L~Ls~N~l~-~lp~~-------------------------~~~l~~L~~L~L~~N~l~-~lp~~~~~ 314 (727)
T 4b8c_D 262 LPAEIKNLSNLRVLDLSHNRLT-SLPAE-------------------------LGSCFQLKYFYFFDNMVT-TLPWEFGN 314 (727)
T ss_dssp CCGGGGGGTTCCEEECTTSCCS-SCCSS-------------------------GGGGTTCSEEECCSSCCC-CCCSSTTS
T ss_pred cChhhhCCCCCCEEeCcCCcCC-ccChh-------------------------hcCCCCCCEEECCCCCCC-ccChhhhc
Confidence 8888999999999999999999 66776 456789999999999998 78888999
Q ss_pred CCCCCEEeCCCCcCCCCCcccccccc--CCeEeCCCCcCCCCCCc
Q 002149 274 LTSLKDLNLNSNQFVGLIPPSLASLS--LDHLDLNNNMFMGPVPK 316 (959)
Q Consensus 274 l~~L~~L~Ls~N~l~~~~p~~~~~~~--L~~L~L~~N~l~~~ip~ 316 (959)
+++|++|+|++|.|++.+|..+.... +..|+|++|.++|.+|.
T Consensus 315 l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 315 LCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 99999999999999999998887653 34578899999887773
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=5.7e-20 Score=188.36 Aligned_cols=177 Identities=21% Similarity=0.253 Sum_probs=151.8
Q ss_pred cEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecc
Q 002149 106 ENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSC 185 (959)
Q Consensus 106 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l 185 (959)
+.++++++.++..+..+ .++|++|+|++|+|+.+++..|.++++|++|+|++|+++.+ .+..+..+++|++|++
T Consensus 10 ~~v~c~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSL----PNGVFNKLTSLTYLNL 83 (208)
T ss_dssp TEEECCSSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC----CTTTTTTCTTCCEEEC
T ss_pred CEEEecCCCccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCcc----ChhhcCCCCCcCEEEC
Confidence 35677888887766554 35899999999999999999999999999999999999852 2344688999999999
Q ss_pred cccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccc
Q 002149 186 MSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSG 265 (959)
Q Consensus 186 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~ 265 (959)
++|++++..+..|..+++|++|+|++|++++..+.. +.++++|++|+|++|++++
T Consensus 84 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-------------------------~~~l~~L~~L~l~~N~l~~ 138 (208)
T 2o6s_A 84 STNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGV-------------------------FDKLTQLKDLRLYQNQLKS 138 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT-------------------------TTTCTTCCEEECCSSCCSC
T ss_pred CCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhH-------------------------hccCCcCCEEECCCCccce
Confidence 999999887788899999999999999999766654 4667999999999999997
Q ss_pred cCchhhcCCCCCCEEeCCCCcCCCCCccccccccCCeEeCCCCcCCCCCCcccc
Q 002149 266 TIPESFGKLTSLKDLNLNSNQFVGLIPPSLASLSLDHLDLNNNMFMGPVPKSKA 319 (959)
Q Consensus 266 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~N~l~~~ip~~~~ 319 (959)
..+..|..+++|++|+|++|.+.+..| +|+.|+++.|.++|.+|....
T Consensus 139 ~~~~~~~~l~~L~~L~l~~N~~~~~~~------~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 139 VPDGVFDRLTSLQYIWLHDNPWDCTCP------GIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSCCBCCCTT------TTHHHHHHHHHCTTTBBCTTS
T ss_pred eCHHHhccCCCccEEEecCCCeecCCC------CHHHHHHHHHhCCceeeccCc
Confidence 777779999999999999999886543 588999999999999997543
No 350
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=9.2e-20 Score=203.66 Aligned_cols=188 Identities=27% Similarity=0.339 Sum_probs=129.2
Q ss_pred CCCCCCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCC-cc-CCCCccEEecCCCCCC
Q 002149 62 SGDPCGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPS-FS-GLSNLKYAYLDGNNFD 139 (959)
Q Consensus 62 ~~~~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~-~l~~L~~L~L~~N~l~ 139 (959)
....||..| .|.. ..+++.+++|+ .+|..+. ..|+.|+|++|+|++.++. |. ++++|++|+|++|+|+
T Consensus 8 ~~~~Cp~~C----~C~~---~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~ 77 (361)
T 2xot_A 8 SVVSCPANC----LCAS---NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN 77 (361)
T ss_dssp CCTTCCTTC----EEET---TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC
T ss_pred cCCCCCCCC----EECC---CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC
Confidence 346787655 4543 35788888888 5676664 3588999999999988874 66 8999999999999999
Q ss_pred CCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCC
Q 002149 140 TIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIP 219 (959)
Q Consensus 140 ~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 219 (959)
.+++..|.++++|++|+|++|+|+. ..+..|..+++|+.|+|++|+|++..|
T Consensus 78 ~i~~~~~~~l~~L~~L~Ls~N~l~~----------------------------~~~~~~~~l~~L~~L~L~~N~i~~~~~ 129 (361)
T 2xot_A 78 FISSEAFVPVPNLRYLDLSSNHLHT----------------------------LDEFLFSDLQALEVLLLYNNHIVVVDR 129 (361)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCE----------------------------ECTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred ccChhhccCCCCCCEEECCCCcCCc----------------------------CCHHHhCCCcCCCEEECCCCcccEECH
Confidence 9998889999999999999998874 223345555666666666666665444
Q ss_pred cccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhh---cCCCCCCEEeCCCCcCCCCCccccc
Q 002149 220 ESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESF---GKLTSLKDLNLNSNQFVGLIPPSLA 296 (959)
Q Consensus 220 ~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~ 296 (959)
.. |.++++|++|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..+.
T Consensus 130 ~~-------------------------~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 184 (361)
T 2xot_A 130 NA-------------------------FEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQ 184 (361)
T ss_dssp TT-------------------------TTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHH
T ss_pred HH-------------------------hCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhh
Confidence 44 3445666666666666664333333 4566777777777777766555555
Q ss_pred ccc---CCeEeCCCCcCCC
Q 002149 297 SLS---LDHLDLNNNMFMG 312 (959)
Q Consensus 297 ~~~---L~~L~L~~N~l~~ 312 (959)
.+. ++.|+|++|.+..
T Consensus 185 ~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 185 KLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp HSCHHHHTTEECCSSCEEC
T ss_pred hccHhhcceEEecCCCccC
Confidence 542 4777888887764
No 351
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.80 E-value=5.2e-21 Score=211.98 Aligned_cols=253 Identities=17% Similarity=0.185 Sum_probs=189.4
Q ss_pred CCcEEeccCCcCCCCCCCccCC--CCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccC
Q 002149 104 KLENIGLQKNQFRGELPSFSGL--SNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLT 181 (959)
Q Consensus 104 ~L~~L~Ls~N~l~~~~~~~~~l--~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~ 181 (959)
.++.|++++|.+. ...+..+ ++++.|++++|.+.+.++. +..+++|++|+|++|.++.. .++..+..+++|+
T Consensus 48 ~~~~l~l~~~~~~--~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~---~~~~~~~~~~~L~ 121 (336)
T 2ast_B 48 LWQTLDLTGKNLH--PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS---TLHGILSQCSKLQ 121 (336)
T ss_dssp TSSEEECTTCBCC--HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH---HHHHHHTTBCCCS
T ss_pred hheeeccccccCC--HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH---HHHHHHhhCCCCC
Confidence 4788999998876 2245666 8899999999999988776 45789999999999988641 2677788899999
Q ss_pred eecccccccCCCCChhhcCCCCCCEEEecCC-cCCCC-CCcccccCCcccccccccCCCCcccccccccCCcCCcEEEcc
Q 002149 182 NLSCMSCNLAGQLPDFLGNFASLQNLKLSGN-NLTGP-IPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLH 259 (959)
Q Consensus 182 ~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~ 259 (959)
+|++++|++++..+..++.+++|++|+|++| .+++. ++.. +.++++|++|+|+
T Consensus 122 ~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~-------------------------~~~~~~L~~L~l~ 176 (336)
T 2ast_B 122 NLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTL-------------------------LSSCSRLDELNLS 176 (336)
T ss_dssp EEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHH-------------------------HHHCTTCCEEECC
T ss_pred EEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHH-------------------------HhcCCCCCEEcCC
Confidence 9999999988888888889999999999999 56632 2222 4567889999999
Q ss_pred Cc-ccccc-CchhhcCCC-CCCEEeCCCC--cCC-CCCccccccc-cCCeEeCCCCc-CCCCCCcccccccccccCcccC
Q 002149 260 GN-HFSGT-IPESFGKLT-SLKDLNLNSN--QFV-GLIPPSLASL-SLDHLDLNNNM-FMGPVPKSKAYKYSYSSNAFCQ 331 (959)
Q Consensus 260 ~N-~l~~~-~p~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~~-~L~~L~L~~N~-l~~~ip~~~~~~~~~~~~~~~~ 331 (959)
+| .+++. ++..+..++ +|++|+|++| .++ +.++..+..+ +|+.|+|++|. +++..+.
T Consensus 177 ~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~--------------- 241 (336)
T 2ast_B 177 WCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQ--------------- 241 (336)
T ss_dssp CCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGG---------------
T ss_pred CCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHH---------------
Confidence 99 88864 678888899 9999999999 455 3455566555 59999999988 5543221
Q ss_pred CCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCc-ccccCCccccCcCcCCEEe
Q 002149 332 PTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFN-LSGTLSPSVGNLDSLTQIK 410 (959)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ 410 (959)
.++.+++|+.|+|++|. +.......++++++|++|+
T Consensus 242 -------------------------------------------~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ 278 (336)
T 2ast_B 242 -------------------------------------------EFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQ 278 (336)
T ss_dssp -------------------------------------------GGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEE
T ss_pred -------------------------------------------HHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEe
Confidence 12234789999999985 3322223678888999999
Q ss_pred CcccccccccCCCccCCC-CCCeEeCCCCccCCCCCCCCC
Q 002149 411 LQSNNISGQIPTNWTNLK-SLTLLDLSQNNLSPPLPKFSG 449 (959)
Q Consensus 411 L~~N~l~g~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~ 449 (959)
|++| ++ ...+..+. .|..|++++|++++..|...+
T Consensus 279 l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 279 VFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp CTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred ccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 9988 33 22344443 477788899999888876543
No 352
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=7.7e-19 Score=181.33 Aligned_cols=164 Identities=26% Similarity=0.389 Sum_probs=121.8
Q ss_pred CCCCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC--CccCCCCccEEecCCCCCCCC
Q 002149 64 DPCGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP--SFSGLSNLKYAYLDGNNFDTI 141 (959)
Q Consensus 64 ~~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~i 141 (959)
..||..| .|.. +.|++++++++ .+|..+.. .+++|+|++|+|++.++ .|.++++|++|+|++|+|+.+
T Consensus 3 ~~CP~~C----~C~~---~~l~~s~n~l~-~iP~~~~~--~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i 72 (220)
T 2v70_A 3 LACPEKC----RCEG---TTVDCSNQKLN-KIPEHIPQ--YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 72 (220)
T ss_dssp -CCCTTC----EEET---TEEECCSSCCS-SCCSCCCT--TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEE
T ss_pred CCCCCCC----EECC---CEeEeCCCCcc-cCccCCCC--CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEE
Confidence 4576544 5653 36888888887 46766643 56889999999988765 378888899999999988888
Q ss_pred ChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcc
Q 002149 142 PADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPES 221 (959)
Q Consensus 142 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 221 (959)
++..|.++++|++|+|++|+|++ ..+..|..+++|++|+|++|+|++..|..
T Consensus 73 ~~~~~~~l~~L~~L~Ls~N~l~~----------------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 124 (220)
T 2v70_A 73 EEGAFEGASGVNEILLTSNRLEN----------------------------VQHKMFKGLESLKTLMLRSNRITCVGNDS 124 (220)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCC----------------------------CCGGGGTTCSSCCEEECTTSCCCCBCTTS
T ss_pred CHHHhCCCCCCCEEECCCCccCc----------------------------cCHhHhcCCcCCCEEECCCCcCCeECHhH
Confidence 88888888888888888887763 33455667777777777777777666655
Q ss_pred cccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCC
Q 002149 222 FKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGL 290 (959)
Q Consensus 222 ~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 290 (959)
+.++++|++|+|++|+|++..|..|..+++|++|+|++|.+...
T Consensus 125 -------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 125 -------------------------FIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp -------------------------STTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred -------------------------cCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 34557777777777777776677777777788887777777654
No 353
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=1.1e-18 Score=181.50 Aligned_cols=165 Identities=26% Similarity=0.385 Sum_probs=125.3
Q ss_pred CCCCCCCCCCCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCC
Q 002149 57 LQWPKSGDPCGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDG 135 (959)
Q Consensus 57 ~~w~~~~~~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~ 135 (959)
..|+.....|. |.+|.|+..+++ .+|..+. ++|++|+|++|.|++..+ .|.++++|++|+|++
T Consensus 10 ~~~~~~~~~Cs---~~~v~c~~~~l~-----------~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 73 (229)
T 3e6j_A 10 SAACPSQCSCS---GTTVDCRSKRHA-----------SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGS 73 (229)
T ss_dssp -CCCCTTCEEE---TTEEECTTSCCS-----------SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred hccCCCCCEEe---CCEeEccCCCcC-----------ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCC
Confidence 34655667776 888888766554 4454443 789999999999999877 588999999999999
Q ss_pred CCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCC
Q 002149 136 NNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLT 215 (959)
Q Consensus 136 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 215 (959)
|+|+.+++..|..+++|++|+|++|+|+. ..+..|..+++|+.|+|++|+|+
T Consensus 74 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~----------------------------l~~~~~~~l~~L~~L~Ls~N~l~ 125 (229)
T 3e6j_A 74 NQLGALPVGVFDSLTQLTVLDLGTNQLTV----------------------------LPSAVFDRLVHLKELFMCCNKLT 125 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCC----------------------------CCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCCcChhhcccCCCcCEEECCCCcCCc----------------------------cChhHhCcchhhCeEeccCCccc
Confidence 99999998888999999999999988763 22344566777777888888777
Q ss_pred CCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCC
Q 002149 216 GPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLI 291 (959)
Q Consensus 216 ~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 291 (959)
.+|.. +.++++|++|+|++|+|++..+..|..+++|+.|+|++|.+....
T Consensus 126 -~lp~~-------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 126 -ELPRG-------------------------IERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp -SCCTT-------------------------GGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred -ccCcc-------------------------cccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 45544 345677888888888887666667777888888888888877553
No 354
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=1.7e-18 Score=204.88 Aligned_cols=184 Identities=26% Similarity=0.404 Sum_probs=145.5
Q ss_pred EecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCC
Q 002149 85 QVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNA 164 (959)
Q Consensus 85 ~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~ 164 (959)
.+..+.+...++ +..|++|+.|+|++|.|... +.|..+++|++|+|++|+|+.+++ |..+++|++|+|++|+|..
T Consensus 27 ~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~ 101 (605)
T 1m9s_A 27 NLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD 101 (605)
T ss_dssp HTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred hccCCCcccccc--hhcCCCCCEEECcCCCCCCC-hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC
Confidence 344444443322 56788888999999988765 468889999999999999998887 8889999999999998874
Q ss_pred CCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCccccc
Q 002149 165 SKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTI 244 (959)
Q Consensus 165 ~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~ 244 (959)
+| .+..+++|+.|+|++|++.+. ..+..+++|+.|+|++|+|++. ..
T Consensus 102 -----l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~----------------------- 148 (605)
T 1m9s_A 102 -----LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TV----------------------- 148 (605)
T ss_dssp -----CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GG-----------------------
T ss_pred -----Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hh-----------------------
Confidence 33 678888899999999988863 4588889999999999988854 22
Q ss_pred ccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCC
Q 002149 245 DVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMG 312 (959)
Q Consensus 245 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~ 312 (959)
+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++. + .+..+ +|+.|+|++|.+++
T Consensus 149 --l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 149 --LSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp --GGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEEC
T ss_pred --hcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcC
Confidence 5677889999999999987666 88889999999999999865 3 35555 58888888888875
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.5e-18 Score=179.18 Aligned_cols=162 Identities=26% Similarity=0.451 Sum_probs=107.7
Q ss_pred CCCCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCC
Q 002149 64 DPCGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIP 142 (959)
Q Consensus 64 ~~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~ 142 (959)
..||..| .|.. ..+++.+++++ .+|..+. ++|+.|+|++|.|++.++ .|.++++|++|+|++|+|+.+.
T Consensus 3 ~~CP~~C----~C~~---~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~ 72 (220)
T 2v9t_B 3 LHCPAAC----TCSN---NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELA 72 (220)
T ss_dssp CCSCTTS----EEET---TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEEC
T ss_pred CCCCCCC----EECC---CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcC
Confidence 4676555 4543 24666777776 5566554 578888888888887776 5777888888888888888777
Q ss_pred hhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCccc
Q 002149 143 ADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESF 222 (959)
Q Consensus 143 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 222 (959)
+..|.++++|++|+|++|+|+. + .+..|..+++|+.|+|++|+|++..|..
T Consensus 73 ~~~~~~l~~L~~L~Ls~N~l~~-----l-----------------------~~~~f~~l~~L~~L~L~~N~l~~~~~~~- 123 (220)
T 2v9t_B 73 PDAFQGLRSLNSLVLYGNKITE-----L-----------------------PKSLFEGLFSLQLLLLNANKINCLRVDA- 123 (220)
T ss_dssp TTTTTTCSSCCEEECCSSCCCC-----C-----------------------CTTTTTTCTTCCEEECCSSCCCCCCTTT-
T ss_pred HHHhhCCcCCCEEECCCCcCCc-----c-----------------------CHhHccCCCCCCEEECCCCCCCEeCHHH-
Confidence 7777777777777777777663 2 2233455666666666666666555544
Q ss_pred ccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCC
Q 002149 223 KGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFV 288 (959)
Q Consensus 223 ~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 288 (959)
|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 124 ------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 124 ------------------------FQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp ------------------------TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ------------------------cCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 344566666666666666555556666666666666666665
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.5e-18 Score=187.43 Aligned_cols=171 Identities=28% Similarity=0.421 Sum_probs=100.0
Q ss_pred cCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccc
Q 002149 100 NQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQ 179 (959)
Q Consensus 100 ~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~ 179 (959)
..+++|++|++++|.+... +.+..+++|++|+|++|+|+.+++ +..+++|++|+|++|+++. + +.+..+++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-----~-~~l~~l~~ 113 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-----L-SSLKDLKK 113 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-----G-GGGTTCTT
T ss_pred hhcCcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-----C-hhhccCCC
Confidence 3455566666666665544 345556666666666666666554 5566666666666666553 2 22555666
Q ss_pred cCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEcc
Q 002149 180 LTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLH 259 (959)
Q Consensus 180 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~ 259 (959)
|+.|++++|++.+. ..+..+++|+.|+|++|++++. .. +..+++|++|+|+
T Consensus 114 L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~-------------------------l~~l~~L~~L~L~ 164 (291)
T 1h6t_A 114 LKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TV-------------------------LSRLTKLDTLSLE 164 (291)
T ss_dssp CCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GG-------------------------GGGCTTCSEEECC
T ss_pred CCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hh-------------------------hccCCCCCEEEcc
Confidence 66666666666543 3456666666666666666643 11 3455666666666
Q ss_pred CccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCC
Q 002149 260 GNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMG 312 (959)
Q Consensus 260 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~ 312 (959)
+|++++..| +..+++|++|+|++|+|++. +. +..+ +|+.|+|++|+++.
T Consensus 165 ~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 165 DNQISDIVP--LAGLTKLQNLYLSKNHISDL-RA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GG-GTTCTTCSEEEEEEEEEEC
T ss_pred CCccccchh--hcCCCccCEEECCCCcCCCC-hh-hccCCCCCEEECcCCcccC
Confidence 666664433 66666666666666666643 32 4444 46666666666654
No 357
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.77 E-value=9.4e-21 Score=227.19 Aligned_cols=334 Identities=15% Similarity=0.074 Sum_probs=211.3
Q ss_pred CcEEEEEecCCccccc----CcccccCCCCCcEEeccCCcCCCCCC-----CccCCCCccEEecCCCCCCCCChhhhcCC
Q 002149 79 SRVTQIQVSSVGLKGT----LPQNLNQLSKLENIGLQKNQFRGELP-----SFSGLSNLKYAYLDGNNFDTIPADFFDGL 149 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~----~~~~l~~l~~L~~L~Ls~N~l~~~~~-----~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 149 (959)
.+++.|+|.++.+++. ++..+..+++|++|+|++|.+++... .+.++++|++|+|++|.+.+++ ..+.++
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~-~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELV-GFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGH-HHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHH-HHHhhh
Confidence 5899999999998765 55667889999999999999985432 2567899999999999999876 568999
Q ss_pred CCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCc-ccccC-Cc
Q 002149 150 ENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPE-SFKGL-NL 227 (959)
Q Consensus 150 ~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l-~l 227 (959)
++|++|+++.+... ......+..+..+++|+.|++.++. ...+|..+..+++|++|+|++|.+++.... .+..+ ++
T Consensus 243 ~~L~~L~l~~~~~~-~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L 320 (592)
T 3ogk_B 243 ANLEEFCGGSLNED-IGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNL 320 (592)
T ss_dssp TTCCEEEECBCCCC-TTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTC
T ss_pred hHHHhhcccccccc-cchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCC
Confidence 99999999864322 1112455667778888888887753 345677777888899999988887643321 12222 45
Q ss_pred ccccccccCCCCcccccccccCCcCCcEEEcc-----------Ccccccc-CchhhcCCCCCCEEeCCCCcCCCCCcccc
Q 002149 228 VNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLH-----------GNHFSGT-IPESFGKLTSLKDLNLNSNQFVGLIPPSL 295 (959)
Q Consensus 228 ~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~-----------~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 295 (959)
+.|.+.+.- .-.+....+..+++|++|+|+ .|.+++. ++..+..+++|++|+|+.|++++..+..+
T Consensus 321 ~~L~L~~~~--~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l 398 (592)
T 3ogk_B 321 EVLETRNVI--GDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESI 398 (592)
T ss_dssp CEEEEEGGG--HHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHH
T ss_pred CEEeccCcc--CHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHH
Confidence 555554210 001111223567788888888 3566643 33334567888888888888887666555
Q ss_pred cc-c-cCCeEeCC----CCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCC
Q 002149 296 AS-L-SLDHLDLN----NNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCK 369 (959)
Q Consensus 296 ~~-~-~L~~L~L~----~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 369 (959)
.. + +|+.|+|+ .|.+++..... . +..+.. .+..+..+....-.+....
T Consensus 399 ~~~~~~L~~L~l~~~~~~n~l~~~p~~~-~----------------------~~~~~~---~~~~L~~L~L~~~~~~l~~ 452 (592)
T 3ogk_B 399 GTYLKNLCDFRLVLLDREERITDLPLDN-G----------------------VRSLLI---GCKKLRRFAFYLRQGGLTD 452 (592)
T ss_dssp HHHCCSCCEEEEEECSCCSCCSSCCCHH-H----------------------HHHHHH---HCTTCCEEEEECCGGGCCH
T ss_pred HhhCCCCcEEEEeecCCCccccCchHHH-H----------------------HHHHHH---hCCCCCEEEEecCCCCccH
Confidence 54 3 58888885 66676531100 0 000000 0000000000000000000
Q ss_pred cccccccCCCCcccEEECCCCccccc-CCccccCcCcCCEEeCcccccccc-cCCCccCCCCCCeEeCCCCccCCC
Q 002149 370 SWLGLSCGTNSKLTVLNLPNFNLSGT-LSPSVGNLDSLTQIKLQSNNISGQ-IPTNWTNLKSLTLLDLSQNNLSPP 443 (959)
Q Consensus 370 ~~~~~~~~~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~g~-~p~~l~~l~~L~~L~Ls~N~l~~~ 443 (959)
.........+++|+.|+|++|++++. ++..+..+++|++|+|++|.+++. ++..+..+++|+.|+|++|+++..
T Consensus 453 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 453 LGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 00000011247788888888888763 455567788888888888888754 444456788888888888888754
No 358
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.76 E-value=2.5e-21 Score=232.12 Aligned_cols=364 Identities=13% Similarity=0.046 Sum_probs=228.4
Q ss_pred CcEEEEEecCCcccccCcccccCC--CCCcEEeccCCc-CCC-CCCC-ccCCCCccEEecCCCCCCCCC----hhhhcCC
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQL--SKLENIGLQKNQ-FRG-ELPS-FSGLSNLKYAYLDGNNFDTIP----ADFFDGL 149 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l--~~L~~L~Ls~N~-l~~-~~~~-~~~l~~L~~L~L~~N~l~~i~----~~~~~~l 149 (959)
.++++|+|+++.+++..+..+..+ .+|++|+|++|. ++. ..+. +.++++|++|+|++|.++... ...+..+
T Consensus 112 ~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~ 191 (592)
T 3ogk_B 112 RQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHN 191 (592)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHC
T ss_pred CCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcC
Confidence 478888998888887766666664 458999998886 211 0111 347889999999999887653 3356678
Q ss_pred CCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCC---CCCcccccC-
Q 002149 150 ENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTG---PIPESFKGL- 225 (959)
Q Consensus 150 ~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~---~~p~~~~~l- 225 (959)
++|++|+|++|.+++.....++..+.++++|+.|++++|.+.+ +|..+..+++|+.|+++.+.... ..+..+..+
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~ 270 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPR 270 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCT
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccc
Confidence 8999999999988744333566666788899999999988886 67888888999999998643331 122222222
Q ss_pred CcccccccccCCCCcccccccccCCcCCcEEEccCccccccCc-hhhcCCCCCCEEeCCCCcCCC-CCccccccc-cCCe
Q 002149 226 NLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIP-ESFGKLTSLKDLNLNSNQFVG-LIPPSLASL-SLDH 302 (959)
Q Consensus 226 ~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~-~L~~ 302 (959)
++..|.+.+.....+ ...+..+++|++|+|++|.+++... ..+..+++|++|+|+ |.+.. .++..+..+ +|+.
T Consensus 271 ~L~~L~l~~~~~~~l---~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 271 KLCRLGLSYMGPNEM---PILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKR 346 (592)
T ss_dssp TCCEEEETTCCTTTG---GGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCE
T ss_pred cccccCccccchhHH---HHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCE
Confidence 344454444322222 2346677889999999988765443 446788888888888 44432 233333333 5888
Q ss_pred EeCCC-----------CcCCCC--------CCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccC
Q 002149 303 LDLNN-----------NMFMGP--------VPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWS 363 (959)
Q Consensus 303 L~L~~-----------N~l~~~--------ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 363 (959)
|+|++ |.+++. .|... .+.+..+.++. .....+... ...+..+...+.
T Consensus 347 L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~--~L~l~~~~l~~--------~~~~~l~~~---~~~L~~L~l~~~ 413 (592)
T 3ogk_B 347 LRIERGADEQGMEDEEGLVSQRGLIALAQGCQELE--YMAVYVSDITN--------ESLESIGTY---LKNLCDFRLVLL 413 (592)
T ss_dssp EEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCS--EEEEEESCCCH--------HHHHHHHHH---CCSCCEEEEEEC
T ss_pred EEeecCccccccccccCccCHHHHHHHHhhCccCe--EEEeecCCccH--------HHHHHHHhh---CCCCcEEEEeec
Confidence 88883 555532 11111 11222332211 111111111 112222222111
Q ss_pred C-CCCCCc-----ccccccCCCCcccEEECCCCc--ccccCCcccc-CcCcCCEEeCccccccc-ccCCCccCCCCCCeE
Q 002149 364 G-NDPCKS-----WLGLSCGTNSKLTVLNLPNFN--LSGTLSPSVG-NLDSLTQIKLQSNNISG-QIPTNWTNLKSLTLL 433 (959)
Q Consensus 364 ~-~~~~~~-----~~~~~~~~~~~L~~L~Ls~N~--l~~~~p~~~~-~l~~L~~L~L~~N~l~g-~~p~~l~~l~~L~~L 433 (959)
. .+.... .....+..+++|+.|+|++|. +++..+..+. .+++|++|+|++|++++ .++..+.++++|+.|
T Consensus 414 ~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L 493 (592)
T 3ogk_B 414 DREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKL 493 (592)
T ss_dssp SCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEE
T ss_pred CCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCee
Confidence 1 111110 011113457899999998654 7766666555 48899999999999986 455667889999999
Q ss_pred eCCCCccCCC-CC----CCCCcceecccCCCC
Q 002149 434 DLSQNNLSPP-LP----KFSGAVKLSLDGNPL 460 (959)
Q Consensus 434 ~Ls~N~l~~~-~p----~~~~~~~~~l~~N~~ 460 (959)
+|++|++++. ++ .+.++..+++.+|.+
T Consensus 494 ~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 494 EMRGCCFSERAIAAAVTKLPSLRYLWVQGYRA 525 (592)
T ss_dssp EEESCCCBHHHHHHHHHHCSSCCEEEEESCBC
T ss_pred eccCCCCcHHHHHHHHHhcCccCeeECcCCcC
Confidence 9999998753 22 256788899999974
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=3.6e-18 Score=184.42 Aligned_cols=176 Identities=23% Similarity=0.405 Sum_probs=153.9
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEcc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALD 158 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 158 (959)
.+++.|++++++++.. + .+..+++|++|+|++|++++.++ +.++++|++|+|++|+++.++. +..+++|++|+|+
T Consensus 46 ~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLE 120 (291)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGGG--GTTCTTCCEEECT
T ss_pred CcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCChh--hccCCCCCEEECC
Confidence 4789999999999854 3 58999999999999999998777 9999999999999999999765 8999999999999
Q ss_pred CcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCC
Q 002149 159 SNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGG 238 (959)
Q Consensus 159 ~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~ 238 (959)
+|+++. + ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..+
T Consensus 121 ~n~i~~-----~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~------------------- 173 (291)
T 1h6t_A 121 HNGISD-----I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP------------------- 173 (291)
T ss_dssp TSCCCC-----C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-------------------
T ss_pred CCcCCC-----C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-------------------
Confidence 999985 3 4688999999999999999976 678999999999999999986543
Q ss_pred CcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccc
Q 002149 239 GFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLA 296 (959)
Q Consensus 239 ~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 296 (959)
+..+++|++|+|++|++++ +| .+..+++|+.|+|++|+++......+.
T Consensus 174 --------l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~~~~~~~ 221 (291)
T 1h6t_A 174 --------LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNKPINHQS 221 (291)
T ss_dssp --------GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECCCEECCS
T ss_pred --------hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCCcccccc
Confidence 3567899999999999995 55 489999999999999999875544443
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=1.2e-18 Score=206.11 Aligned_cols=168 Identities=22% Similarity=0.326 Sum_probs=115.6
Q ss_pred CCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccC
Q 002149 102 LSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLT 181 (959)
Q Consensus 102 l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~ 181 (959)
+..+..+.|..+.+.... .+..+++|+.|+|++|.|..++ .|..+++|++|+|++|+|++ ++. +..+++|+
T Consensus 20 l~~l~~l~l~~~~i~~~~-~~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~-----~~~-l~~l~~L~ 90 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTD-----IKP-LTNLKNLG 90 (605)
T ss_dssp HHHHHHHHTTCSCTTSEE-CHHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCC-----CGG-GGGCTTCC
T ss_pred HHHHHHHhccCCCccccc-chhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCC-----Chh-hccCCCCC
Confidence 344556677777776543 3567888999999999998887 38889999999999998874 333 66777777
Q ss_pred eecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCc
Q 002149 182 NLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGN 261 (959)
Q Consensus 182 ~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N 261 (959)
.|+|++|++.+. | .+..+++|+.|+|++|+|++. + . +..+++|+.|+|++|
T Consensus 91 ~L~Ls~N~l~~l-~-~l~~l~~L~~L~Ls~N~l~~l-~-~-------------------------l~~l~~L~~L~Ls~N 141 (605)
T 1m9s_A 91 WLFLDENKIKDL-S-SLKDLKKLKSLSLEHNGISDI-N-G-------------------------LVHLPQLESLYLGNN 141 (605)
T ss_dssp EEECCSSCCCCC-T-TSTTCTTCCEEECTTSCCCCC-G-G-------------------------GGGCTTCSEEECCSS
T ss_pred EEECcCCCCCCC-h-hhccCCCCCEEEecCCCCCCC-c-c-------------------------ccCCCccCEEECCCC
Confidence 777777777652 2 566777777777777777642 1 1 345567777777777
Q ss_pred cccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCC
Q 002149 262 HFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFM 311 (959)
Q Consensus 262 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~ 311 (959)
+|++. ..|..+++|+.|+|++|+|++.+| +..+ +|+.|+|++|.|+
T Consensus 142 ~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 142 KITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp CCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 77743 456677777777777777776544 4444 4666666666554
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=4.6e-18 Score=175.51 Aligned_cols=142 Identities=27% Similarity=0.387 Sum_probs=130.9
Q ss_pred CcceEecC-----------CcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCC
Q 002149 71 WKHVFCSN-----------SRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNF 138 (959)
Q Consensus 71 w~gv~C~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l 138 (959)
|..|.|.. ..++.|+|++|++++..+..|..+++|++|+|++|+|++..| .|.++++|++|+|++|+|
T Consensus 13 ~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 13 NNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp TTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred CCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 78888875 268999999999998777789999999999999999999877 699999999999999999
Q ss_pred CCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCC
Q 002149 139 DTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTG 216 (959)
Q Consensus 139 ~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 216 (959)
+.+++..|.++++|++|+|++|+|++ ..|..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINC----LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCC----CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCHhHccCCCCCCEEECCCCCCCE----eCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99999999999999999999999986 346778899999999999999999888899999999999999999874
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=3.3e-18 Score=190.99 Aligned_cols=169 Identities=23% Similarity=0.231 Sum_probs=124.8
Q ss_pred cEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhc-CCCCCcEEEccCcccCCCCCCCCCccccCccccCeec
Q 002149 106 ENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFD-GLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLS 184 (959)
Q Consensus 106 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~ 184 (959)
+.+++++|.++.++..+. ..+++|+|++|+|+.+++..|. ++++|++|+|++|+|+
T Consensus 21 ~~l~c~~~~l~~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~--------------------- 77 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN--------------------- 77 (361)
T ss_dssp TEEECCSSCCSSCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC---------------------
T ss_pred CEEEeCCCCcCccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC---------------------
Confidence 466667666665544433 2466666666666666666665 6666666666666554
Q ss_pred ccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcccc
Q 002149 185 CMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFS 264 (959)
Q Consensus 185 l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~ 264 (959)
+..+..|.++++|++|+|++|+|++..+.. |.++++|++|+|++|+|+
T Consensus 78 -------~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-------------------------~~~l~~L~~L~L~~N~i~ 125 (361)
T 2xot_A 78 -------FISSEAFVPVPNLRYLDLSSNHLHTLDEFL-------------------------FSDLQALEVLLLYNNHIV 125 (361)
T ss_dssp -------EECTTTTTTCTTCCEEECCSSCCCEECTTT-------------------------TTTCTTCCEEECCSSCCC
T ss_pred -------ccChhhccCCCCCCEEECCCCcCCcCCHHH-------------------------hCCCcCCCEEECCCCccc
Confidence 445667889999999999999999766555 567799999999999999
Q ss_pred ccCchhhcCCCCCCEEeCCCCcCCCCCccccc---cc-cCCeEeCCCCcCCCCCCccc-------ccccccccCcc
Q 002149 265 GTIPESFGKLTSLKDLNLNSNQFVGLIPPSLA---SL-SLDHLDLNNNMFMGPVPKSK-------AYKYSYSSNAF 329 (959)
Q Consensus 265 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~-~L~~L~L~~N~l~~~ip~~~-------~~~~~~~~~~~ 329 (959)
+..|..|..+++|++|+|++|+|++..+..|. .+ +|+.|+|++|+|++..+... ...+.+++|.+
T Consensus 126 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~ 201 (361)
T 2xot_A 126 VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201 (361)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCE
T ss_pred EECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCc
Confidence 88899999999999999999999987777763 34 69999999999986432211 12345666666
No 363
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.6e-18 Score=183.63 Aligned_cols=138 Identities=20% Similarity=0.194 Sum_probs=106.7
Q ss_pred CcccCcccccCceEEEEEEE-cCCcE--EEEEEccccccc----------------------HHHHHHHHHHHHHHHhcC
Q 002149 613 FASENELGRGGFGVVYKGEL-DDGTK--IAVKRMEAGVIS----------------------KKAVDEFHSEIAVLSKVR 667 (959)
Q Consensus 613 ~~~~~~lG~G~fg~V~~~~~-~~~~~--vavK~~~~~~~~----------------------~~~~~~~~~E~~~l~~l~ 667 (959)
|++.+.||+|+||.||+|.. .+|+. ||||+++..... ......+.+|+.++..++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999987 67999 999987543111 112246889999999998
Q ss_pred CCCc--eeEEEEEEeCceEEEEEEecCC-C----chhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeE
Q 002149 668 HRHL--VSLLGYSVAGYERLLVYEYMPQ-G----ALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLH-SLAHQSFI 739 (959)
Q Consensus 668 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~iv 739 (959)
|+++ ..++++ ...++||||+.+ | +|.+.... .++..+..++.|++.||.||| + .+||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~---~giv 193 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQE---AELV 193 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHT---SCEE
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHH---CCEE
Confidence 8764 344432 356899999942 4 56554321 224467789999999999999 8 8999
Q ss_pred ecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 740 HRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 740 H~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
||||||+|||++. .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999998 9999999999754
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=6.4e-18 Score=174.41 Aligned_cols=68 Identities=24% Similarity=0.222 Sum_probs=54.5
Q ss_pred CCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCccCCCCC
Q 002149 378 TNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNLSPPLP 445 (959)
Q Consensus 378 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p 445 (959)
.+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 103 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 103 GLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 34677788888888887777888888888888888888887778888888888888888888876544
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=1.4e-20 Score=221.61 Aligned_cols=120 Identities=23% Similarity=0.288 Sum_probs=77.2
Q ss_pred CcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCcccccccccccCcccC
Q 002149 253 LRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFCQ 331 (959)
Q Consensus 253 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~ 331 (959)
|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..+..+ +|+.|+|++|.+++ +|
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp---------------- 502 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD---------------- 502 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG----------------
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc----------------
Confidence 5566666666663 454 566666666666666666 445555544 35555555555553 22
Q ss_pred CCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccC-CccccCcCcCCEEe
Q 002149 332 PTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTL-SPSVGNLDSLTQIK 410 (959)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ 410 (959)
.++.+++|+.|+|++|+|++.+ |..++++++|+.|+
T Consensus 503 -------------------------------------------~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 503 -------------------------------------------GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp -------------------------------------------GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred -------------------------------------------ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 1234477888888888888776 88888888888888
Q ss_pred CcccccccccCCC---ccCCCCCCeEeC
Q 002149 411 LQSNNISGQIPTN---WTNLKSLTLLDL 435 (959)
Q Consensus 411 L~~N~l~g~~p~~---l~~l~~L~~L~L 435 (959)
|++|.|++.+|.. +..+++|+.|||
T Consensus 540 L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 540 LQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred ecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 8888888654422 234788888865
No 366
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=1.3e-17 Score=168.96 Aligned_cols=154 Identities=18% Similarity=0.190 Sum_probs=107.5
Q ss_pred cCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccc
Q 002149 100 NQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQ 179 (959)
Q Consensus 100 ~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~ 179 (959)
.++++|++|+|++|.|+..+ .+..+++|++|+|++|.++.++ .+..+++|++|+|++|++++ ..+..+..+++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~l~~n~l~~----~~~~~l~~l~~ 113 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATNYN--PISGLSNLERLRIMGKDVTS----DKIPNLSGLTS 113 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSCCG--GGTTCTTCCEEEEECTTCBG----GGSCCCTTCTT
T ss_pred hhcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCcch--hhhcCCCCCEEEeECCccCc----ccChhhcCCCC
Confidence 55667777888888777443 6777777888888887766554 47777888888888887764 34566677777
Q ss_pred cCeecccccccCCCCChhhcCCCCCCEEEecCCc-CCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEc
Q 002149 180 LTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNN-LTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWL 258 (959)
Q Consensus 180 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L 258 (959)
|+.|++++|++++..|..+..+++|++|+|++|+ ++ .+| . +..+++|++|+|
T Consensus 114 L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~-------------------------l~~l~~L~~L~l 166 (197)
T 4ezg_A 114 LTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-P-------------------------LKTLPELKSLNI 166 (197)
T ss_dssp CCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-G-------------------------GGGCSSCCEEEC
T ss_pred CCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-h-------------------------hcCCCCCCEEEC
Confidence 7777777777777677777777788888888777 44 333 2 455677778888
Q ss_pred cCccccccCchhhcCCCCCCEEeCCCCcCCC
Q 002149 259 HGNHFSGTIPESFGKLTSLKDLNLNSNQFVG 289 (959)
Q Consensus 259 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 289 (959)
++|++++ ++ .+..+++|++|++++|+|.+
T Consensus 167 ~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 167 QFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp TTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 8887774 33 67777777777777777753
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.72 E-value=6.6e-17 Score=167.93 Aligned_cols=154 Identities=24% Similarity=0.343 Sum_probs=125.1
Q ss_pred cEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecc
Q 002149 106 ENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSC 185 (959)
Q Consensus 106 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l 185 (959)
+.++++++.++.++..+. ++|++|+|++|+|+.+++..|.++++|++|+|++|+|+.
T Consensus 22 ~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~--------------------- 78 (229)
T 3e6j_A 22 TTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA--------------------- 78 (229)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------
T ss_pred CEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC---------------------
Confidence 356677777776655443 677888888888888777777777777777777776652
Q ss_pred cccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccc
Q 002149 186 MSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSG 265 (959)
Q Consensus 186 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~ 265 (959)
..+..|..+++|+.|+|++|+|++..+.. +..+++|++|+|++|+|+
T Consensus 79 -------i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~-------------------------~~~l~~L~~L~Ls~N~l~- 125 (229)
T 3e6j_A 79 -------LPVGVFDSLTQLTVLDLGTNQLTVLPSAV-------------------------FDRLVHLKELFMCCNKLT- 125 (229)
T ss_dssp -------CCTTTTTTCTTCCEEECCSSCCCCCCTTT-------------------------TTTCTTCCEEECCSSCCC-
T ss_pred -------cChhhcccCCCcCEEECCCCcCCccChhH-------------------------hCcchhhCeEeccCCccc-
Confidence 33456788999999999999999766655 466799999999999999
Q ss_pred cCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCC
Q 002149 266 TIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVP 315 (959)
Q Consensus 266 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip 315 (959)
.+|..+..+++|++|+|++|+|++..+..+..+ +|+.|+|++|.+.+..+
T Consensus 126 ~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 126 ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 789999999999999999999998888888887 69999999999986543
No 368
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.72 E-value=9.5e-20 Score=218.55 Aligned_cols=362 Identities=14% Similarity=0.118 Sum_probs=186.1
Q ss_pred CcEEEEEecCCcccccCccccc-CCCCCcEEeccCC-cCCCC-CCC-ccCCCCccEEecCCCCCCCCChhhhc----CCC
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLN-QLSKLENIGLQKN-QFRGE-LPS-FSGLSNLKYAYLDGNNFDTIPADFFD----GLE 150 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~-~l~~L~~L~Ls~N-~l~~~-~~~-~~~l~~L~~L~L~~N~l~~i~~~~~~----~l~ 150 (959)
.++++|+|+++.+++..+..+. .+++|++|+|++| .++.. .+. +.++++|++|+|++|.++......+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4677777777777665555554 5677777777777 44331 222 34567777777777776654433333 455
Q ss_pred CCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcC-------CCCCCcccc
Q 002149 151 NLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNL-------TGPIPESFK 223 (959)
Q Consensus 151 ~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l-------~~~~p~~~~ 223 (959)
+|++|+|++|. ..+....++..+..+++|+.|++++|...+.++..+..+++|+.|+++.+.. .+ ++..+.
T Consensus 185 ~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~ 262 (594)
T 2p1m_B 185 SLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALS 262 (594)
T ss_dssp CCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHH
T ss_pred cCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHh
Confidence 77777777775 1111112222234457777777777632223566666677777777554431 11 111111
Q ss_pred cC-Ccccc-cccccCCCCcccccccccCCcCCcEEEccCccccccC-chhhcCCCCCCEEeCCCCcCCCC-Cccccccc-
Q 002149 224 GL-NLVNL-WLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTI-PESFGKLTSLKDLNLNSNQFVGL-IPPSLASL- 298 (959)
Q Consensus 224 ~l-~l~~L-~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~~- 298 (959)
++ ++..| .+.+.. .......+..+++|++|+|++|.+++.. +..+..+++|++|+|++| ++.. ++.....+
T Consensus 263 ~~~~L~~Ls~~~~~~---~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~ 338 (594)
T 2p1m_B 263 GCKELRCLSGFWDAV---PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCK 338 (594)
T ss_dssp TCTTCCEEECCBTCC---GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCT
T ss_pred cCCCcccccCCcccc---hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCC
Confidence 11 12222 111111 1111122335677777777777766432 233556777777777776 3321 11111222
Q ss_pred cCCeEeCC---------CCcCCCC--------CCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccc
Q 002149 299 SLDHLDLN---------NNMFMGP--------VPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTS 361 (959)
Q Consensus 299 ~L~~L~L~---------~N~l~~~--------ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 361 (959)
+|+.|+|+ .|.+++. .|.... +.+..+.++. .....+.. .+..+..+...
T Consensus 339 ~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~--L~~~~~~l~~--------~~~~~l~~---~~~~L~~L~L~ 405 (594)
T 2p1m_B 339 DLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLES--VLYFCRQMTN--------AALITIAR---NRPNMTRFRLC 405 (594)
T ss_dssp TCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCE--EEEEESCCCH--------HHHHHHHH---HCTTCCEEEEE
T ss_pred CCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHH--HHHhcCCcCH--------HHHHHHHh---hCCCcceeEee
Confidence 47777663 2333321 111111 1122222210 00111111 11112222222
Q ss_pred cCCCCCCCccc--------ccccCCCCcccEEECCCCcccccCCccccC-cCcCCEEeCcccccccccCCCc-cCCCCCC
Q 002149 362 WSGNDPCKSWL--------GLSCGTNSKLTVLNLPNFNLSGTLSPSVGN-LDSLTQIKLQSNNISGQIPTNW-TNLKSLT 431 (959)
Q Consensus 362 ~~~~~~~~~~~--------~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~g~~p~~l-~~l~~L~ 431 (959)
+.+...|.... ...+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+
T Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~ 484 (594)
T 2p1m_B 406 IIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLR 484 (594)
T ss_dssp ESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCC
T ss_pred cccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcC
Confidence 11111111111 01134457899999977 677666666665 7889999999998876655555 6688899
Q ss_pred eEeCCCCccCCCCC-----CCCCcceecccCCCC
Q 002149 432 LLDLSQNNLSPPLP-----KFSGAVKLSLDGNPL 460 (959)
Q Consensus 432 ~L~Ls~N~l~~~~p-----~~~~~~~~~l~~N~~ 460 (959)
.|+|++|++++... .+.++..+.+.+|+.
T Consensus 485 ~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 485 KLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp EEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred EEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 99999998854322 245667788887754
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=6.9e-18 Score=179.25 Aligned_cols=169 Identities=20% Similarity=0.259 Sum_probs=115.2
Q ss_pred EEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCc
Q 002149 81 VTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSN 160 (959)
Q Consensus 81 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 160 (959)
++.+++..+++++. + .+..+++|++|++++|.|+... .+..+++|++|+|++|+|+.+++ |.++++|++|+|++|
T Consensus 21 l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N 95 (263)
T 1xeu_A 21 AVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRN 95 (263)
T ss_dssp HHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSS
T ss_pred HHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCC
Confidence 34445556666532 3 4677778888888888777543 67777888888888888887776 777888888888888
Q ss_pred ccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCc
Q 002149 161 NFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGF 240 (959)
Q Consensus 161 ~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l 240 (959)
++++ +|.... ++|+.|++++|++++. ..+..+++|+.|+|++|++++. + .
T Consensus 96 ~l~~-----l~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~------------------- 145 (263)
T 1xeu_A 96 RLKN-----LNGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-M------------------- 145 (263)
T ss_dssp CCSC-----CTTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-G-------------------
T ss_pred ccCC-----cCcccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-H-------------------
Confidence 7774 332222 6777777777777753 3467777777777777777643 2 1
Q ss_pred ccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCc
Q 002149 241 TGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIP 292 (959)
Q Consensus 241 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 292 (959)
+..+++|++|+|++|++++. ..+..+++|+.|+|++|++++.+.
T Consensus 146 ------l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~~ 189 (263)
T 1xeu_A 146 ------LGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEPV 189 (263)
T ss_dssp ------GGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCCE
T ss_pred ------HccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCcc
Confidence 44567777777777777754 566777777777777777775543
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.69 E-value=2.6e-19 Score=210.69 Aligned_cols=127 Identities=24% Similarity=0.296 Sum_probs=106.2
Q ss_pred CCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCcccccccccccCccc
Q 002149 252 QLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFC 330 (959)
Q Consensus 252 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~ 330 (959)
+|..+.+++|.+++ +|. ..|+.|+|++|+|++ +|. +..+ +|+.|+|++|.|+ .+|..
T Consensus 424 ~L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~------------- 481 (567)
T 1dce_A 424 DLRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPA------------- 481 (567)
T ss_dssp HHHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGG-------------
T ss_pred hhhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchh-------------
Confidence 45566677777773 332 259999999999997 455 7777 6999999999998 56642
Q ss_pred CCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEe
Q 002149 331 QPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIK 410 (959)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 410 (959)
++.+++|+.|+|++|+|++ +| .++++++|+.|+
T Consensus 482 ---------------------------------------------~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~ 514 (567)
T 1dce_A 482 ---------------------------------------------LAALRCLEVLQASDNALEN-VD-GVANLPRLQELL 514 (567)
T ss_dssp ---------------------------------------------GGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEE
T ss_pred ---------------------------------------------hhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEE
Confidence 2356899999999999997 67 899999999999
Q ss_pred Cccccccccc-CCCccCCCCCCeEeCCCCccCCCCCCC
Q 002149 411 LQSNNISGQI-PTNWTNLKSLTLLDLSQNNLSPPLPKF 447 (959)
Q Consensus 411 L~~N~l~g~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 447 (959)
|++|+|++.+ |..|..|++|+.|+|++|+|++.+|..
T Consensus 515 Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 515 LCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp CCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 9999999877 999999999999999999999987753
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=1.9e-17 Score=175.94 Aligned_cols=170 Identities=23% Similarity=0.293 Sum_probs=145.9
Q ss_pred CCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCcccc
Q 002149 101 QLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQL 180 (959)
Q Consensus 101 ~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L 180 (959)
.+.+|..+++++|.+++.. .+..+++|++|+|++|+|+.++ .+..+++|++|+|++|+|++ ++. +..+++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~-----~~~-l~~l~~L 87 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISD-----LSP-LKDLTKL 87 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC-----CGG-GTTCSSC
T ss_pred HHHHHHHHHhcCCCccccc-chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCC-----Chh-hccCCCC
Confidence 5667888999999998765 6888999999999999999988 58999999999999999985 444 8899999
Q ss_pred CeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccC
Q 002149 181 TNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHG 260 (959)
Q Consensus 181 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~ 260 (959)
+.|++++|++++. |. +.. ++|+.|+|++|++++. + . +..+++|++|+|++
T Consensus 88 ~~L~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~-~-~-------------------------l~~l~~L~~L~Ls~ 137 (263)
T 1xeu_A 88 EELSVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT-D-S-------------------------LIHLKNLEILSIRN 137 (263)
T ss_dssp CEEECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS-G-G-------------------------GTTCTTCCEEECTT
T ss_pred CEEECCCCccCCc-Cc-ccc-CcccEEEccCCccCCC-h-h-------------------------hcCcccccEEECCC
Confidence 9999999999874 33 233 8999999999999853 2 2 56789999999999
Q ss_pred ccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCC
Q 002149 261 NHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGP 313 (959)
Q Consensus 261 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ 313 (959)
|++++. + .+..+++|++|+|++|++++. ..+..+ +|+.|+|++|.+++.
T Consensus 138 N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 138 NKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp SCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 999964 4 789999999999999999987 556666 699999999999865
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.68 E-value=8.6e-17 Score=162.99 Aligned_cols=155 Identities=17% Similarity=0.215 Sum_probs=132.5
Q ss_pred CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcC
Q 002149 121 SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGN 200 (959)
Q Consensus 121 ~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~ 200 (959)
....+++|++|+|++|+|+.++ .+..+++|++|+|++|.++. +..+..+++|++|++++|++++..+..+..
T Consensus 39 ~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~~n~~~~------~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~ 110 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVTDLT--GIEYAHNIKDLTINNIHATN------YNPISGLSNLERLRIMGKDVTSDKIPNLSG 110 (197)
T ss_dssp BHHHHHTCCEEEEESSCCSCCT--TGGGCTTCSEEEEESCCCSC------CGGGTTCTTCCEEEEECTTCBGGGSCCCTT
T ss_pred ChhhcCCccEEeccCCCccChH--HHhcCCCCCEEEccCCCCCc------chhhhcCCCCCEEEeECCccCcccChhhcC
Confidence 4567889999999999999888 48999999999999997753 457889999999999999999888889999
Q ss_pred CCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcc-ccccCchhhcCCCCCCE
Q 002149 201 FASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNH-FSGTIPESFGKLTSLKD 279 (959)
Q Consensus 201 l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~ 279 (959)
+++|++|+|++|++++..+.. +..+++|++|+|++|+ ++ .+| .+..+++|++
T Consensus 111 l~~L~~L~Ls~n~i~~~~~~~-------------------------l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~ 163 (197)
T 4ezg_A 111 LTSLTLLDISHSAHDDSILTK-------------------------INTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKS 163 (197)
T ss_dssp CTTCCEEECCSSBCBGGGHHH-------------------------HTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCE
T ss_pred CCCCCEEEecCCccCcHhHHH-------------------------HhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCE
Confidence 999999999999999766655 5677999999999998 66 566 7999999999
Q ss_pred EeCCCCcCCCCCccccccc-cCCeEeCCCCcCCC
Q 002149 280 LNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMG 312 (959)
Q Consensus 280 L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~ 312 (959)
|+|++|++++.. .+..+ +|+.|++++|++.+
T Consensus 164 L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 164 LNIQFDGVHDYR--GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp EECTTBCCCCCT--TGGGCSSCCEEEECBC----
T ss_pred EECCCCCCcChH--HhccCCCCCEEEeeCcccCC
Confidence 999999999743 56666 69999999999864
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=1.1e-17 Score=203.09 Aligned_cols=116 Identities=22% Similarity=0.320 Sum_probs=55.5
Q ss_pred CccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCC
Q 002149 171 PKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNM 250 (959)
Q Consensus 171 p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l 250 (959)
|..+..++.|+.|+|++|++. .+|..+..+++|++|+|++|+|+ .+|.. ++++
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~-------------------------~~~l 269 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAE-------------------------IKNL 269 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGG-------------------------GGGG
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChh-------------------------hhCC
Confidence 344455555555555555554 34444445555555555555555 34433 2334
Q ss_pred cCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCC
Q 002149 251 DQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVP 315 (959)
Q Consensus 251 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip 315 (959)
++|++|+|++|+|+ .+|..|+.+++|++|+|++|.|+ .+|..|..+ +|+.|+|++|.|++.+|
T Consensus 270 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p 333 (727)
T 4b8c_D 270 SNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFL 333 (727)
T ss_dssp TTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHH
T ss_pred CCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCCh
Confidence 55555555555555 44555555555555555555554 333334444 35555555555544333
No 374
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.67 E-value=8.4e-19 Score=210.26 Aligned_cols=325 Identities=16% Similarity=0.134 Sum_probs=193.2
Q ss_pred CcEEEEEecCC-ccccc-CcccccCCCCCcEEeccCCcCCCCCC----C-ccCCCCccEEecCCCCCCCCChhhh----c
Q 002149 79 SRVTQIQVSSV-GLKGT-LPQNLNQLSKLENIGLQKNQFRGELP----S-FSGLSNLKYAYLDGNNFDTIPADFF----D 147 (959)
Q Consensus 79 ~~v~~l~l~~~-~l~g~-~~~~l~~l~~L~~L~Ls~N~l~~~~~----~-~~~l~~L~~L~L~~N~l~~i~~~~~----~ 147 (959)
.+++.|+|.++ .++.. ++..+.++++|++|+|++|.+++..+ . ...+++|++|+|++|. ..+....+ .
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~ 208 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVT 208 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHH
Confidence 58999999988 55543 45556689999999999999877544 2 2367899999999997 44444333 4
Q ss_pred CCCCCcEEEccCc-ccCCCCCCCCCccccCccccCeecccccc--------------------------cC----CCCCh
Q 002149 148 GLENLQVLALDSN-NFNASKGWSFPKGLQSSAQLTNLSCMSCN--------------------------LA----GQLPD 196 (959)
Q Consensus 148 ~l~~L~~L~Ls~N-~l~~~~~~~lp~~l~~l~~L~~L~l~~n~--------------------------l~----~~~p~ 196 (959)
.+++|++|+|++| .+. .++..+..+++|+.|++..+. +. ..++.
T Consensus 209 ~~~~L~~L~L~~~~~~~-----~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~ 283 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLE-----KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPA 283 (594)
T ss_dssp HCTTCCEEECCTTSCHH-----HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGG
T ss_pred hCCCCcEEecCCCCcHH-----HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHH
Confidence 5699999999988 322 245555556666666544331 11 12333
Q ss_pred hhcCCCCCCEEEecCCcCCCCCCcc-cccC-CcccccccccCCCCcccccccccCCcCCcEEEcc---------Cccccc
Q 002149 197 FLGNFASLQNLKLSGNNLTGPIPES-FKGL-NLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLH---------GNHFSG 265 (959)
Q Consensus 197 ~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l-~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~---------~N~l~~ 265 (959)
.+..+++|++|+|++|.+++..... +..+ +++.|.+.++. .-.+.......+++|++|+|+ .|.+++
T Consensus 284 ~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~~--~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~ 361 (594)
T 2p1m_B 284 VYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYI--EDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTE 361 (594)
T ss_dssp GHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGGG--HHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCH
T ss_pred HHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCcc--CHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCH
Confidence 3345678888888888865322211 1222 45555555441 001111122346778888773 345554
Q ss_pred cCchhhc-CCCCCCEEeCCCCcCCCCCcccccc-c-cCCeEeCC--C----CcCCCCCCcccccccccccCcccCCCCCC
Q 002149 266 TIPESFG-KLTSLKDLNLNSNQFVGLIPPSLAS-L-SLDHLDLN--N----NMFMGPVPKSKAYKYSYSSNAFCQPTEGV 336 (959)
Q Consensus 266 ~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~-~-~L~~L~L~--~----N~l~~~ip~~~~~~~~~~~~~~~~~~~~~ 336 (959)
.....+. .+++|++|+++.|++++.....+.. + +|+.|+|+ + |.+++. |..
T Consensus 362 ~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~-~~~------------------- 421 (594)
T 2p1m_B 362 QGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLE-PLD------------------- 421 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCC-CTH-------------------
T ss_pred HHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCC-chh-------------------
Confidence 3333333 3778888888778777655544432 3 57888887 3 444321 100
Q ss_pred CCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccC-CCCcccEEECCCCcccccCCccc-cCcCcCCEEeCccc
Q 002149 337 PCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCG-TNSKLTVLNLPNFNLSGTLSPSV-GNLDSLTQIKLQSN 414 (959)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N 414 (959)
..+..+..... .+..+.. .+....... ..++ .+++|+.|+|++|.+++..+..+ ..+++|++|+|++|
T Consensus 422 ---~~~~~l~~~~~---~L~~L~L---~~~l~~~~~-~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n 491 (594)
T 2p1m_B 422 ---IGFGAIVEHCK---DLRRLSL---SGLLTDKVF-EYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDC 491 (594)
T ss_dssp ---HHHHHHHHHCT---TCCEEEC---CSSCCHHHH-HHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESC
T ss_pred ---hHHHHHHhhCC---CccEEee---cCcccHHHH-HHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCC
Confidence 00000000000 0011100 000000000 0011 25789999999999987766655 67899999999999
Q ss_pred ccccccCC-CccCCCCCCeEeCCCCccC
Q 002149 415 NISGQIPT-NWTNLKSLTLLDLSQNNLS 441 (959)
Q Consensus 415 ~l~g~~p~-~l~~l~~L~~L~Ls~N~l~ 441 (959)
.+++..+. .+..+++|+.|++++|+++
T Consensus 492 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 492 PFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp SCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred CCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 99765444 4556899999999999985
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=2.8e-16 Score=158.32 Aligned_cols=140 Identities=23% Similarity=0.379 Sum_probs=123.0
Q ss_pred CCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCC--ccCCCCccEEecCCCCCCCCCh
Q 002149 66 CGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPS--FSGLSNLKYAYLDGNNFDTIPA 143 (959)
Q Consensus 66 C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~--~~~l~~L~~L~L~~N~l~~i~~ 143 (959)
||..| .|.. +.|++++++++ .+|..+.. +|++|+|++|+|++.++. |.++++|++|+|++|+|+++++
T Consensus 2 CP~~C----~C~~---~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 71 (192)
T 1w8a_A 2 CPAMC----HCEG---TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEP 71 (192)
T ss_dssp CCTTS----EEET---TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCT
T ss_pred cCCCC----EECC---CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCH
Confidence 65544 4653 56888999986 77877654 899999999999998884 8999999999999999999999
Q ss_pred hhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCC
Q 002149 144 DFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIP 219 (959)
Q Consensus 144 ~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 219 (959)
..|.++++|++|+|++|+|++ ..+..+..+++|+.|+|++|++++..|..|..+++|++|+|++|.+++..+
T Consensus 72 ~~~~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 72 NAFEGASHIQELQLGENKIKE----ISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp TTTTTCTTCCEEECCSCCCCE----ECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred hHcCCcccCCEEECCCCcCCc----cCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999999999999999999996 345568899999999999999999999999999999999999999997644
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.64 E-value=3.9e-16 Score=157.31 Aligned_cols=131 Identities=27% Similarity=0.356 Sum_probs=75.8
Q ss_pred cEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChh-hhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeec
Q 002149 106 ENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPAD-FFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLS 184 (959)
Q Consensus 106 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~ 184 (959)
++|++++|.++.++..+.. +|++|+|++|+|+.+++. .|..+++|++|+|++|+
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~----------------------- 65 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQ----------------------- 65 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSC-----------------------
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCC-----------------------
Confidence 3455555555443333321 445555555555544432 34444444444444444
Q ss_pred ccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcccc
Q 002149 185 CMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFS 264 (959)
Q Consensus 185 l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~ 264 (959)
+++..|..|.++++|++|+|++|+|++..+.. +.++++|++|+|++|+|+
T Consensus 66 -----l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-------------------------~~~l~~L~~L~L~~N~l~ 115 (192)
T 1w8a_A 66 -----LTGIEPNAFEGASHIQELQLGENKIKEISNKM-------------------------FLGLHQLKTLNLYDNQIS 115 (192)
T ss_dssp -----CCCBCTTTTTTCTTCCEEECCSCCCCEECSSS-------------------------STTCTTCCEEECCSSCCC
T ss_pred -----CCCcCHhHcCCcccCCEEECCCCcCCccCHHH-------------------------hcCCCCCCEEECCCCcCC
Confidence 44445566666777777777777777655544 344567777777777777
Q ss_pred ccCchhhcCCCCCCEEeCCCCcCCCCC
Q 002149 265 GTIPESFGKLTSLKDLNLNSNQFVGLI 291 (959)
Q Consensus 265 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 291 (959)
+.+|..|..+++|++|+|++|.+.+..
T Consensus 116 ~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 116 CVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp EECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred eeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 666777777777777777777776543
No 377
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=5.8e-16 Score=169.62 Aligned_cols=138 Identities=14% Similarity=0.118 Sum_probs=101.1
Q ss_pred CcccCcccccCceEEEEEEEcCCcEEEEEEccccccc---------------H-----HHHHHHHHHHHHHHhcCCCCce
Q 002149 613 FASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVIS---------------K-----KAVDEFHSEIAVLSKVRHRHLV 672 (959)
Q Consensus 613 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~---------------~-----~~~~~~~~E~~~l~~l~h~niv 672 (959)
|++...||+|+||.||+|...+|+.||||+++....+ . .......+|...+.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8999999999999999999889999999987532110 0 0011234577777777655443
Q ss_pred eEEEEEEeCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC
Q 002149 673 SLLGYSVAGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGD 752 (959)
Q Consensus 673 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~ 752 (959)
-..-+... ..+|||||+++++|.++.. ......++.|++.+|.|||+ .|||||||||.|||+++
T Consensus 177 vp~p~~~~--~~~LVME~i~G~~L~~l~~-----------~~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 177 VPEPIAQS--RHTIVMSLVDALPMRQVSS-----------VPDPASLYADLIALILRLAK---HGLIHGDFNEFNILIRE 240 (397)
T ss_dssp CCCEEEEE--TTEEEEECCSCEEGGGCCC-----------CSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEE
T ss_pred CCeeeecc--CceEEEEecCCccHhhhcc-----------cHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeC
Confidence 22112122 3379999999988865431 11245688999999999999 89999999999999987
Q ss_pred CC----------cEEEeecccccc
Q 002149 753 DF----------RAKVSDFGLVKL 766 (959)
Q Consensus 753 ~~----------~~ki~DfGla~~ 766 (959)
++ .+.|+||+-+..
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCcccccccccceEEEEeCCccc
Confidence 76 389999997754
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=2.2e-15 Score=151.67 Aligned_cols=139 Identities=23% Similarity=0.363 Sum_probs=119.0
Q ss_pred CCCCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCCh
Q 002149 64 DPCGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPA 143 (959)
Q Consensus 64 ~~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~ 143 (959)
..||..| .|.. +.|++++++++ .+|..+. ++|++|+|++|+|+.++..|.++++|++|+|++|+|+.+++
T Consensus 2 ~~CP~~C----~C~~---~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~ 71 (193)
T 2wfh_A 2 SRCPTEC----TCLD---TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSN 71 (193)
T ss_dssp --CCTTC----EEET---TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCT
T ss_pred CCCCCCC----EeCC---CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCH
Confidence 3576544 5543 35788888888 6776654 68999999999999776689999999999999999999999
Q ss_pred hhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCC
Q 002149 144 DFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTG 216 (959)
Q Consensus 144 ~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 216 (959)
..|.++++|++|+|++|+|+.+ .|..+..+++|+.|+|++|+++...+..|..+++|+.|+|++|.+..
T Consensus 72 ~~f~~l~~L~~L~Ls~N~l~~i----~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 72 QSFSNMTQLLTLILSYNRLRCI----PPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp TTTTTCTTCCEEECCSSCCCBC----CTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred hHccCCCCCCEEECCCCccCEe----CHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9999999999999999999963 34568899999999999999998877889999999999999999874
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=5.9e-15 Score=146.62 Aligned_cols=131 Identities=24% Similarity=0.357 Sum_probs=111.6
Q ss_pred EEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCc
Q 002149 82 TQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSN 160 (959)
Q Consensus 82 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 160 (959)
+.|++.+++++ .+|..+. ++|++|+|++|++++.++ .|.++++|++|+|++|+|+.+++..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34555666666 4554443 689999999999998887 4799999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCC
Q 002149 161 NFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIP 219 (959)
Q Consensus 161 ~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 219 (959)
+|++. .+..+..+++|+.|++++|++++..+..+..+++|+.|+|++|.+.+..|
T Consensus 87 ~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSL----PNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCC----CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred Ccccc----CHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99852 33456889999999999999998777778999999999999999997655
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=2.4e-15 Score=148.05 Aligned_cols=137 Identities=17% Similarity=0.175 Sum_probs=121.7
Q ss_pred CcEEEEEecCCccc-ccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLK-GTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~-g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.|++++++++ +.+|..+..+++|++|+|++|.|++. +.|..+++|++|+|++|+|+...+..+..+++|++|+|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 47899999999998 88999999999999999999999988 78999999999999999999977777888999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCC---hhhcCCCCCCEEEecCCcCCCCCCc
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLP---DFLGNFASLQNLKLSGNNLTGPIPE 220 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p---~~l~~l~~L~~L~Ls~N~l~~~~p~ 220 (959)
++|+|+++. .+..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+. .+|.
T Consensus 103 s~N~l~~~~---~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 103 SGNKLKDIS---TLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp BSSSCCSSG---GGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred cCCccCcch---hHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 999998521 12678899999999999999997766 58999999999999999987 3443
No 381
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=5.4e-16 Score=170.77 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=89.7
Q ss_pred cCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCcccccccccccCcc
Q 002149 251 DQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAF 329 (959)
Q Consensus 251 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~ 329 (959)
.++..+.+.++-...........+++|+.|+|++|+++.+.+..|..+ +|+.|+|.+| ++. |+.
T Consensus 202 ~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~-I~~------------- 266 (329)
T 3sb4_A 202 RDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKT-IGQ------------- 266 (329)
T ss_dssp GGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCE-ECT-------------
T ss_pred cccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cce-ehH-------------
Confidence 445555555442221111111237888888888888887777788877 5888888877 432 221
Q ss_pred cCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCccc-EEECCCCcccccCCccccCcCcCCE
Q 002149 330 CQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLT-VLNLPNFNLSGTLSPSVGNLDSLTQ 408 (959)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~ 408 (959)
..|..+++|+ .|+|.+ ++....+.+|.++++|+.
T Consensus 267 --------------------------------------------~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 267 --------------------------------------------RVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp --------------------------------------------TTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred --------------------------------------------HHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 2345568898 999988 777677889999999999
Q ss_pred EeCcccccccccCCCccCCCCCCeEeC
Q 002149 409 IKLQSNNISGQIPTNWTNLKSLTLLDL 435 (959)
Q Consensus 409 L~L~~N~l~g~~p~~l~~l~~L~~L~L 435 (959)
|+|++|+++...+..|.++++|+.++.
T Consensus 302 l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 302 VLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEeCCCccCccchhhhcCCcchhhhcc
Confidence 999999999777778999999998874
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.58 E-value=5.6e-15 Score=145.37 Aligned_cols=134 Identities=21% Similarity=0.247 Sum_probs=94.6
Q ss_pred CCCCcEEeccCCcCC-CCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccc
Q 002149 102 LSKLENIGLQKNQFR-GELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQ 179 (959)
Q Consensus 102 l~~L~~L~Ls~N~l~-~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~ 179 (959)
.++|++|+|++|.++ +.+| .|..+++|++|+|++|.|+.+ ..|..+++|++|+|++|+++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~---------------- 84 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIF---------------- 84 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCC----------------
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCc----------------
Confidence 366777777777776 3444 456677777777777777666 44666666666666666554
Q ss_pred cCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCC-cccccCCcccccccccCCCCcccccccccCCcCCcEEEc
Q 002149 180 LTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIP-ESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWL 258 (959)
Q Consensus 180 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L 258 (959)
+.+|..+..+++|+.|+|++|++++... .. +..+++|++|+|
T Consensus 85 ------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-------------------------l~~l~~L~~L~l 127 (168)
T 2ell_A 85 ------------GGLDMLAEKLPNLTHLNLSGNKLKDISTLEP-------------------------LKKLECLKSLDL 127 (168)
T ss_dssp ------------SCCCHHHHHCTTCCEEECBSSSCCSSGGGGG-------------------------GSSCSCCCEEEC
T ss_pred ------------hHHHHHHhhCCCCCEEeccCCccCcchhHHH-------------------------HhcCCCCCEEEe
Confidence 3456667778888888888888875322 22 566788888888
Q ss_pred cCccccccCc---hhhcCCCCCCEEeCCCCcCCCC
Q 002149 259 HGNHFSGTIP---ESFGKLTSLKDLNLNSNQFVGL 290 (959)
Q Consensus 259 ~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~ 290 (959)
++|.+++..+ ..+..+++|++|++++|.+...
T Consensus 128 ~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 128 FNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred eCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 8888885544 4788888899999988888744
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=9.2e-15 Score=147.17 Aligned_cols=71 Identities=30% Similarity=0.390 Sum_probs=39.0
Q ss_pred CCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhc
Q 002149 193 QLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFG 272 (959)
Q Consensus 193 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 272 (959)
..+..|.++++|++|+|++|+|++..+.. |..+++|++|+|++|+|++..+..|.
T Consensus 69 i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~-------------------------f~~l~~L~~L~L~~N~l~~~~~~~~~ 123 (193)
T 2wfh_A 69 LSNQSFSNMTQLLTLILSYNRLRCIPPRT-------------------------FDGLKSLRLLSLHGNDISVVPEGAFN 123 (193)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCBCCTTT-------------------------TTTCTTCCEEECCSSCCCBCCTTTTT
T ss_pred eCHhHccCCCCCCEEECCCCccCEeCHHH-------------------------hCCCCCCCEEECCCCCCCeeChhhhh
Confidence 33445555566666666666665544443 33445566666666666544444555
Q ss_pred CCCCCCEEeCCCCcCC
Q 002149 273 KLTSLKDLNLNSNQFV 288 (959)
Q Consensus 273 ~l~~L~~L~Ls~N~l~ 288 (959)
.+++|+.|+|++|.+.
T Consensus 124 ~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 124 DLSALSHLAIGANPLY 139 (193)
T ss_dssp TCTTCCEEECCSSCEE
T ss_pred cCccccEEEeCCCCee
Confidence 5566666666655554
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=2.3e-14 Score=142.36 Aligned_cols=133 Identities=23% Similarity=0.306 Sum_probs=92.1
Q ss_pred CcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeec
Q 002149 105 LENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLS 184 (959)
Q Consensus 105 L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~ 184 (959)
.+.+++++|+++..+..+. ++|++|+|++|+++.+++..|..+++|++|+|++|+|+.
T Consensus 9 ~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------- 66 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS-------------------- 66 (177)
T ss_dssp TTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC--------------------
T ss_pred CCEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceE--------------------
Confidence 3567777777776654432 577777777777777777777777777777777776653
Q ss_pred ccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcccc
Q 002149 185 CMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFS 264 (959)
Q Consensus 185 l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~ 264 (959)
..+..|..+++|+.|+|++|+|++..+.. +..+++|++|+|++|+++
T Consensus 67 --------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-------------------------~~~l~~L~~L~l~~N~l~ 113 (177)
T 2o6r_A 67 --------LPDGVFDKLTKLTILYLHENKLQSLPNGV-------------------------FDKLTQLKELALDTNQLK 113 (177)
T ss_dssp --------CCTTTTTTCTTCCEEECCSSCCCCCCTTT-------------------------TTTCTTCCEEECCSSCCS
T ss_pred --------eChhHccCCCccCEEECCCCCccccCHHH-------------------------hhCCcccCEEECcCCcce
Confidence 33344566777777777777777555444 345677778888888877
Q ss_pred ccCchhhcCCCCCCEEeCCCCcCCCCCc
Q 002149 265 GTIPESFGKLTSLKDLNLNSNQFVGLIP 292 (959)
Q Consensus 265 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 292 (959)
+..+..|..+++|++|+|++|.+.+..|
T Consensus 114 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 114 SVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred EeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 6555566777788888888887776544
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.55 E-value=6.8e-15 Score=141.59 Aligned_cols=129 Identities=18% Similarity=0.190 Sum_probs=112.1
Q ss_pred CcEEEEEecCCccc-ccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLK-GTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~-g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
.+++.|++++++++ +.+|..+..+++|++|+|++|.+++. +.|.++++|++|+|++|+|+...+..+..+++|++|+|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 47889999999998 88899899999999999999999887 77899999999999999999977777888999999999
Q ss_pred cCcccCCCCCCCCCccccCccccCeecccccccCCCCC---hhhcCCCCCCEEEecC
Q 002149 158 DSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLP---DFLGNFASLQNLKLSG 211 (959)
Q Consensus 158 s~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p---~~l~~l~~L~~L~Ls~ 211 (959)
++|++++. ..+..+..+++|+.|++++|++++..+ ..+..+++|+.|++++
T Consensus 96 s~N~i~~~---~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 96 SGNKIKDL---STIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TTSCCCSH---HHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCcCCCh---HHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99998842 123678889999999999999987766 5788899999998864
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.54 E-value=1.1e-14 Score=140.10 Aligned_cols=128 Identities=22% Similarity=0.288 Sum_probs=89.2
Q ss_pred CCCCcEEeccCCcCC-CCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccc
Q 002149 102 LSKLENIGLQKNQFR-GELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQ 179 (959)
Q Consensus 102 l~~L~~L~Ls~N~l~-~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~ 179 (959)
.++|+.|++++|.++ +.+| .+..+++|++|+|++|+|+.+ ..|..+++|++|+|++|+++
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~---------------- 77 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVS---------------- 77 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCC----------------
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCccc----------------
Confidence 356777777777776 4444 456677777777777777666 44666666666666666554
Q ss_pred cCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCC-CcccccCCcccccccccCCCCcccccccccCCcCCcEEEc
Q 002149 180 LTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPI-PESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWL 258 (959)
Q Consensus 180 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L 258 (959)
+.+|..+..+++|++|++++|++++.. +.. +..+++|++|++
T Consensus 78 ------------~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~-------------------------~~~l~~L~~L~l 120 (149)
T 2je0_A 78 ------------GGLEVLAEKCPNLTHLNLSGNKIKDLSTIEP-------------------------LKKLENLKSLDL 120 (149)
T ss_dssp ------------SCTHHHHHHCTTCCEEECTTSCCCSHHHHGG-------------------------GGGCTTCCEEEC
T ss_pred ------------chHHHHhhhCCCCCEEECCCCcCCChHHHHH-------------------------HhhCCCCCEEeC
Confidence 345666777888888888888887531 232 566788888888
Q ss_pred cCccccccCc---hhhcCCCCCCEEeCCC
Q 002149 259 HGNHFSGTIP---ESFGKLTSLKDLNLNS 284 (959)
Q Consensus 259 ~~N~l~~~~p---~~~~~l~~L~~L~Ls~ 284 (959)
++|++++..+ ..+..+++|++|++++
T Consensus 121 ~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 121 FNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred cCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888886555 5788888888888764
No 387
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=7.6e-15 Score=161.57 Aligned_cols=260 Identities=12% Similarity=0.090 Sum_probs=157.3
Q ss_pred cEEEEEecCCcccccCcccccC-CCCCcEEeccCCcCC--------------------CCCC-CccC--------CCCcc
Q 002149 80 RVTQIQVSSVGLKGTLPQNLNQ-LSKLENIGLQKNQFR--------------------GELP-SFSG--------LSNLK 129 (959)
Q Consensus 80 ~v~~l~l~~~~l~g~~~~~l~~-l~~L~~L~Ls~N~l~--------------------~~~~-~~~~--------l~~L~ 129 (959)
+++.|.+.++ +.+.--..+.. +++|+.|||++|+|. .+++ .|.+ +++|+
T Consensus 26 ~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~ 104 (329)
T 3sb4_A 26 SITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLE 104 (329)
T ss_dssp HCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCC
T ss_pred ceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCc
Confidence 5677776642 22111123444 788899999998887 1222 3555 66677
Q ss_pred EEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccc----cCCCCChhhcCCCCCC
Q 002149 130 YAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCN----LAGQLPDFLGNFASLQ 205 (959)
Q Consensus 130 ~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~----l~~~~p~~l~~l~~L~ 205 (959)
.|+|.+ +++.|+..+|.++++|+.|+|++|.+..+.. ..+..+.++..+.+..+. ........|.++.+|+
T Consensus 105 ~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~----~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 105 KVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLP----EALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp C-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECT----TSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred EEECCc-cccchhHHHhhcCcccceEEcCCCCccccch----hhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 777766 6666666667777777777777666654332 223344445555444321 1122223344444444
Q ss_pred -EEEecCCcCCCCCCcccc-----cCCcccccccccCCCCccccccc-ccCCcCCcEEEccCccccccCchhhcCCCCCC
Q 002149 206 -NLKLSGNNLTGPIPESFK-----GLNLVNLWLNDQKGGGFTGTIDV-LGNMDQLRTLWLHGNHFSGTIPESFGKLTSLK 278 (959)
Q Consensus 206 -~L~Ls~N~l~~~~p~~~~-----~l~l~~L~~~~~~~~~l~~~~~~-l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 278 (959)
.+.+.... .++..+. .-++..+.+...- ....... ...+++|+.|+|++|+++...+.+|.++++|+
T Consensus 180 ~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l---~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~ 253 (329)
T 3sb4_A 180 TTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKL---DNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLL 253 (329)
T ss_dssp EEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECC---CHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCC
T ss_pred eeEEecCCC---cHHHHHhhcccCccccceEEEeeee---cHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCC
Confidence 33332211 1111100 0001111111100 0000000 12378999999999999976777899999999
Q ss_pred EEeCCCCcCCCCCcccccccc-CC-eEeCCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCc
Q 002149 279 DLNLNSNQFVGLIPPSLASLS-LD-HLDLNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPP 356 (959)
Q Consensus 279 ~L~Ls~N~l~~~~p~~~~~~~-L~-~L~L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (959)
.|+|.+| ++.+.+.+|..+. |+ .++|.+ .++. |+
T Consensus 254 ~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~-I~----------------------------------------- 289 (329)
T 3sb4_A 254 KIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTA-IE----------------------------------------- 289 (329)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCE-EC-----------------------------------------
T ss_pred EEECCcc-cceehHHHhhCChhccEEEEEcc-cceE-Ec-----------------------------------------
Confidence 9999998 8888888999985 99 999987 4542 11
Q ss_pred ccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEeC
Q 002149 357 RLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKL 411 (959)
Q Consensus 357 ~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 411 (959)
...|..+++|+.|+|++|++....+.+|.++++|+.|+.
T Consensus 290 ----------------~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 290 ----------------FGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp ----------------TTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ----------------hhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 123556789999999999999888889999999999874
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.50 E-value=3.8e-13 Score=151.24 Aligned_cols=59 Identities=14% Similarity=0.183 Sum_probs=27.6
Q ss_pred CCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCcc
Q 002149 379 NSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNNL 440 (959)
Q Consensus 379 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l 440 (959)
+++|+.++|. +.+......+|.++++|+.|+|.+| ++..-+..|.++ +|+.|++++|.+
T Consensus 299 c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 299 CPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp CTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSC
T ss_pred CccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCC
Confidence 3445555554 2344344444555555555555333 433333445555 555555555544
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=3.7e-16 Score=158.44 Aligned_cols=154 Identities=25% Similarity=0.326 Sum_probs=93.0
Q ss_pred ccCCCCCcEEeccCCcCCCCCC-------CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCC
Q 002149 99 LNQLSKLENIGLQKNQFRGELP-------SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFP 171 (959)
Q Consensus 99 l~~l~~L~~L~Ls~N~l~~~~~-------~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp 171 (959)
+.....++.++++.|.+.+..| .|.++++|++|+|++|+|+.++ .|.++++|++|+|++|+++ .+|
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~--~~~~l~~L~~L~l~~n~l~-----~l~ 86 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS--SLSGMENLRILSLGRNLIK-----KIE 86 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC--CHHHHTTCCEEEEEEEEEC-----SCS
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc--ccccCCCCCEEECCCCCcc-----ccc
Confidence 4555666777777777766554 3556666677777766666665 4666677777777777665 345
Q ss_pred ccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCC-cccccCCcccccccccCCCCcccccccccCC
Q 002149 172 KGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIP-ESFKGLNLVNLWLNDQKGGGFTGTIDVLGNM 250 (959)
Q Consensus 172 ~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l 250 (959)
..+..+++|+.|++++|++++ +| .+..+++|+.|+|++|++++..+ .. +..+
T Consensus 87 ~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~-------------------------l~~l 139 (198)
T 1ds9_A 87 NLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDK-------------------------LAAL 139 (198)
T ss_dssp SHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHH-------------------------HTTT
T ss_pred chhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHH-------------------------HhcC
Confidence 555555666666666666654 23 45666666666666666653211 11 4455
Q ss_pred cCCcEEEccCccccccCch----------hhcCCCCCCEEeCCCCcCC
Q 002149 251 DQLRTLWLHGNHFSGTIPE----------SFGKLTSLKDLNLNSNQFV 288 (959)
Q Consensus 251 ~~L~~L~L~~N~l~~~~p~----------~~~~l~~L~~L~Ls~N~l~ 288 (959)
++|++|++++|.+++.+|. .+..+++|+.|| +|.++
T Consensus 140 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 140 DKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp TTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 6666666666666655443 255666666665 45444
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=4.3e-14 Score=140.16 Aligned_cols=134 Identities=15% Similarity=0.200 Sum_probs=76.2
Q ss_pred ccCCCCCcEEeccCCcCCCCCCCccCCC-CccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCc
Q 002149 99 LNQLSKLENIGLQKNQFRGELPSFSGLS-NLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSS 177 (959)
Q Consensus 99 l~~l~~L~~L~Ls~N~l~~~~~~~~~l~-~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l 177 (959)
+.++.+|+.|+|++|+++.. +.+..+. +|++|+|++|+|+.+ ..|..+++|++|+|++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N----------------- 74 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNN----------------- 74 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSS-----------------
T ss_pred cCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCC-----------------
Confidence 34445555555555555533 3333332 455555555554444 23444444444444444
Q ss_pred cccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEE
Q 002149 178 AQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLW 257 (959)
Q Consensus 178 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~ 257 (959)
++++..+..+..+++|+.|+|++|+|+ .+|.. ..+..+++|++|+
T Consensus 75 -----------~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~-----------------------~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 75 -----------RICRIGEGLDQALPDLTELILTNNSLV-ELGDL-----------------------DPLASLKSLTYLC 119 (176)
T ss_dssp -----------CCCEECSCHHHHCTTCCEEECCSCCCC-CGGGG-----------------------GGGGGCTTCCEEE
T ss_pred -----------cccccCcchhhcCCCCCEEECCCCcCC-cchhh-----------------------HhhhcCCCCCEEE
Confidence 444333444567777888888888775 33330 0145667788888
Q ss_pred ccCccccccCchh----hcCCCCCCEEeCCCCcCC
Q 002149 258 LHGNHFSGTIPES----FGKLTSLKDLNLNSNQFV 288 (959)
Q Consensus 258 L~~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 288 (959)
|++|.++ .+|.. +..+++|+.||+++|.+.
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 8888877 45553 777788888888877765
No 391
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=2.1e-13 Score=134.59 Aligned_cols=116 Identities=26% Similarity=0.470 Sum_probs=91.5
Q ss_pred CCCCCCCCCcceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCC
Q 002149 63 GDPCGPPCWKHVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTI 141 (959)
Q Consensus 63 ~~~C~~~~w~gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i 141 (959)
...||..| .|.. +.+++++++++ .+|..+. ++|++|+|++|+|++.+| .|.++++|++|+|++|+|+.+
T Consensus 3 ~~~CP~~C----~C~~---~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i 72 (174)
T 2r9u_A 3 SAGCPSQC----SCDQ---TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAI 72 (174)
T ss_dssp CCSSCTTS----EECS---SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCC----EECC---cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCcc
Confidence 45676544 5642 57888998886 6777665 789999999999998877 688899999999999999999
Q ss_pred ChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCC
Q 002149 142 PADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTG 216 (959)
Q Consensus 142 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 216 (959)
++..|.++++|++|+|++|+|+. ..+..|..+++|+.|+|++|.+..
T Consensus 73 ~~~~~~~l~~L~~L~L~~N~l~~----------------------------l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 73 PTGVFDKLTQLTQLDLNDNHLKS----------------------------IPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCC----------------------------CCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ChhHhCCcchhhEEECCCCccce----------------------------eCHHHhccccCCCEEEeCCCCccc
Confidence 98888889999999998888763 223446777888888888888774
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=6.5e-14 Score=138.86 Aligned_cols=128 Identities=18% Similarity=0.241 Sum_probs=113.6
Q ss_pred CcEEEEEecCCcccccCcccccCCC-CCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEc
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQLS-KLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLAL 157 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 157 (959)
..++.|++++|+++ .+|. +..+. +|++|+|++|.|++. +.|.++++|++|+|++|+|+.+++..|..+++|++|+|
T Consensus 19 ~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 47899999999999 4554 55555 999999999999987 78999999999999999999999988899999999999
Q ss_pred cCcccCCCCCCCCCc--cccCccccCeecccccccCCCCCh----hhcCCCCCCEEEecCCcCC
Q 002149 158 DSNNFNASKGWSFPK--GLQSSAQLTNLSCMSCNLAGQLPD----FLGNFASLQNLKLSGNNLT 215 (959)
Q Consensus 158 s~N~l~~~~~~~lp~--~l~~l~~L~~L~l~~n~l~~~~p~----~l~~l~~L~~L~Ls~N~l~ 215 (959)
++|+|+ .+|. .+..+++|+.|++++|.+.. +|. .+..+++|+.|++++|.+.
T Consensus 96 ~~N~i~-----~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 96 TNNSLV-----ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CSCCCC-----CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCcCC-----cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999997 4665 78899999999999999985 455 4899999999999999876
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=5.4e-13 Score=131.20 Aligned_cols=112 Identities=27% Similarity=0.383 Sum_probs=87.4
Q ss_pred ceEecCCcEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCC
Q 002149 73 HVFCSNSRVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLEN 151 (959)
Q Consensus 73 gv~C~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 151 (959)
.+.|. .+.|++++++++ .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|+|+.+++..|.++++
T Consensus 6 ~C~C~---~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~ 79 (170)
T 3g39_A 6 QCSCS---GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 79 (170)
T ss_dssp CCEEE---TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTT
T ss_pred cCCcC---CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCC
Confidence 33564 356788888888 4676663 788999999999988877 5888899999999999999988888888888
Q ss_pred CcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCC
Q 002149 152 LQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPI 218 (959)
Q Consensus 152 L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 218 (959)
|++|+|++|+|+. ..+..|..+++|+.|+|++|.++...
T Consensus 80 L~~L~L~~N~l~~----------------------------~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 80 LTQLSLNDNQLKS----------------------------IPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCEEECCSSCCCC----------------------------CCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCEEECCCCccCE----------------------------eCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 8888888887763 33445677788888888888887543
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.42 E-value=3e-15 Score=151.66 Aligned_cols=60 Identities=23% Similarity=0.278 Sum_probs=37.7
Q ss_pred CcccEEECCCCcccccCC-ccccCcCcCCEEeCcccccccccCCC----------ccCCCCCCeEeCCCCccC
Q 002149 380 SKLTVLNLPNFNLSGTLS-PSVGNLDSLTQIKLQSNNISGQIPTN----------WTNLKSLTLLDLSQNNLS 441 (959)
Q Consensus 380 ~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~----------l~~l~~L~~L~Ls~N~l~ 441 (959)
++|+.|+|++|++.+..+ ..+..+++|++|+|++|.+++.+|.. +..+++|+.|| +|.++
T Consensus 115 ~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 115 VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 445555555555553222 35666777777777777777666553 67778888776 56555
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.37 E-value=2.4e-12 Score=126.50 Aligned_cols=88 Identities=22% Similarity=0.244 Sum_probs=63.3
Q ss_pred ccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEc
Q 002149 179 QLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWL 258 (959)
Q Consensus 179 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L 258 (959)
+|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+.. |.++++|++|+|
T Consensus 31 ~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~-------------------------f~~l~~L~~L~L 85 (170)
T 3g39_A 31 TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGV-------------------------FDKLTQLTQLSL 85 (170)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT-------------------------TTTCTTCCEEEC
T ss_pred CCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhh-------------------------ccCCCCCCEEEC
Confidence 4444444444455556677778888888888888888655554 456678888888
Q ss_pred cCccccccCchhhcCCCCCCEEeCCCCcCCCCC
Q 002149 259 HGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLI 291 (959)
Q Consensus 259 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 291 (959)
++|+|++..+..|..+++|++|+|++|.++...
T Consensus 86 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 86 NDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 888888666667888888888888888887553
No 396
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.36 E-value=1.3e-11 Score=138.65 Aligned_cols=261 Identities=13% Similarity=0.201 Sum_probs=194.6
Q ss_pred EEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccC
Q 002149 81 VTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDS 159 (959)
Q Consensus 81 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 159 (959)
++.+.+.+ +++..-..+|.+. +|+.++|..| ++.+.. .|.++ +|+.+.|.+ .++.|...+|.++.+|+.++|++
T Consensus 115 l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~ 189 (401)
T 4fdw_A 115 YNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSK 189 (401)
T ss_dssp CSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTT
T ss_pred ccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCC
Confidence 33444433 3443334567764 7999999877 766666 68884 799999996 89999999999999999999999
Q ss_pred cccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCC
Q 002149 160 NNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGG 239 (959)
Q Consensus 160 N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~ 239 (959)
|.++. ++.......+|+.+.+.+ ++...-..+|.++++|+.++|..| ++.+...+|
T Consensus 190 n~l~~-----I~~~aF~~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF----------------- 245 (401)
T 4fdw_A 190 TKITK-----LPASTFVYAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAF----------------- 245 (401)
T ss_dssp SCCSE-----ECTTTTTTCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTT-----------------
T ss_pred CcceE-----echhhEeecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccc-----------------
Confidence 99984 555555578999999984 477777889999999999999875 553444443
Q ss_pred cccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCC-----CCCccccccc-cCCeEeCCCCcCCCC
Q 002149 240 FTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFV-----GLIPPSLASL-SLDHLDLNNNMFMGP 313 (959)
Q Consensus 240 l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~~-~L~~L~L~~N~l~~~ 313 (959)
.+ .+|+.+.| .|.++..-..+|.++++|+.+++.+|.+. .+.+..|..+ +|+.++|.++ ++.
T Consensus 246 --------~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~~-i~~- 313 (401)
T 4fdw_A 246 --------RE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPES-IRI- 313 (401)
T ss_dssp --------TT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCTT-CCE-
T ss_pred --------cc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCCc-eEE-
Confidence 33 57888888 45566566778888888888888887765 4556667776 5888887743 431
Q ss_pred CCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCccc
Q 002149 314 VPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLS 393 (959)
Q Consensus 314 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~ 393 (959)
|+ ...|..+.+|+.|+|..| +.
T Consensus 314 I~---------------------------------------------------------~~aF~~c~~L~~l~lp~~-l~ 335 (401)
T 4fdw_A 314 LG---------------------------------------------------------QGLLGGNRKVTQLTIPAN-VT 335 (401)
T ss_dssp EC---------------------------------------------------------TTTTTTCCSCCEEEECTT-CC
T ss_pred Eh---------------------------------------------------------hhhhcCCCCccEEEECcc-cc
Confidence 11 123445688999999655 77
Q ss_pred ccCCccccCcCcCCEEeCcccccccccCCCccCCC-CCCeEeCCCCccC
Q 002149 394 GTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLK-SLTLLDLSQNNLS 441 (959)
Q Consensus 394 ~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~-~L~~L~Ls~N~l~ 441 (959)
...+.+|.++ +|+.|+|++|.+....+..|.+++ .++.|++..|.+.
T Consensus 336 ~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 336 QINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp EECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 6777889999 999999999998866667788884 7889998877654
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.34 E-value=4.8e-12 Score=124.81 Aligned_cols=89 Identities=22% Similarity=0.274 Sum_probs=63.8
Q ss_pred cccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEE
Q 002149 178 AQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLW 257 (959)
Q Consensus 178 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~ 257 (959)
++|+.|+|++|++.+..|..|.++++|+.|+|++|+|++..+.. |.++++|++|+
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~-------------------------~~~l~~L~~L~ 87 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGV-------------------------FDKLTQLTQLD 87 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT-------------------------TTTCTTCCEEE
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhH-------------------------hCCcchhhEEE
Confidence 34444444444555556677788888888888888888654443 45668888888
Q ss_pred ccCccccccCchhhcCCCCCCEEeCCCCcCCCCC
Q 002149 258 LHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLI 291 (959)
Q Consensus 258 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 291 (959)
|++|+|++..+..|..+++|++|+|++|.+....
T Consensus 88 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 88 LNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CCCCccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 8888888666666888888888888888887543
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.27 E-value=2.6e-14 Score=159.18 Aligned_cols=188 Identities=19% Similarity=0.120 Sum_probs=108.7
Q ss_pred CCCcEEeccCCcCCCCCC-Cc----c-CCCCccEEecCCCCCCCCChh-hhcCCCCCcEEEccCcccCCCCCCCCCccc-
Q 002149 103 SKLENIGLQKNQFRGELP-SF----S-GLSNLKYAYLDGNNFDTIPAD-FFDGLENLQVLALDSNNFNASKGWSFPKGL- 174 (959)
Q Consensus 103 ~~L~~L~Ls~N~l~~~~~-~~----~-~l~~L~~L~L~~N~l~~i~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l- 174 (959)
++|+.|+|++|.|+.... .| . +.++|++|+|++|.|+..... ....+++|++|+|++|.|+......+...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456666777766654322 11 1 225677777777766542221 223345677777777766543222222222
Q ss_pred cCccccCeecccccccCC----CCChhhcCCCCCCEEEecCCcCCCCCCcccccCCcccccccccCCCCcccccccccCC
Q 002149 175 QSSAQLTNLSCMSCNLAG----QLPDFLGNFASLQNLKLSGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNM 250 (959)
Q Consensus 175 ~~l~~L~~L~l~~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l 250 (959)
...++|+.|+|++|+++. .++..+..+++|++|+|++|.|+......+ ...+...
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L---------------------~~~L~~~ 210 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELL---------------------AAQLDRN 210 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHH---------------------HHHGGGC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHH---------------------HHHHhcC
Confidence 234567777777777653 244555677888888888888764221111 1124556
Q ss_pred cCCcEEEccCcccccc----CchhhcCCCCCCEEeCCCCcCCCCCccccccc---c---CCeEe--CCCCcCC
Q 002149 251 DQLRTLWLHGNHFSGT----IPESFGKLTSLKDLNLNSNQFVGLIPPSLASL---S---LDHLD--LNNNMFM 311 (959)
Q Consensus 251 ~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~---~---L~~L~--L~~N~l~ 311 (959)
++|++|+|++|.|++. +...+...++|++|+|++|.|+......+..+ . |+.+. +..|.++
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 7888999999988753 44555667889999999998886655555433 1 55555 5555543
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.23 E-value=8.4e-14 Score=155.05 Aligned_cols=189 Identities=16% Similarity=0.138 Sum_probs=138.4
Q ss_pred CcEEEEEecCCcccccCcccccC-----CCCCcEEeccCCcCCCCCC-C-ccCCCCccEEecCCCCCCCCChhhh-----
Q 002149 79 SRVTQIQVSSVGLKGTLPQNLNQ-----LSKLENIGLQKNQFRGELP-S-FSGLSNLKYAYLDGNNFDTIPADFF----- 146 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g~~~~~l~~-----l~~L~~L~Ls~N~l~~~~~-~-~~~l~~L~~L~L~~N~l~~i~~~~~----- 146 (959)
..++.|+|+++.++......+.. .++|++|+|++|.|+.... . ...+++|++|+|++|+|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 47899999999998644433333 3799999999999875433 2 3456789999999999986655544
Q ss_pred cCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCC----CChhhcCCCCCCEEEecCCcCCCCCCccc
Q 002149 147 DGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQ----LPDFLGNFASLQNLKLSGNNLTGPIPESF 222 (959)
Q Consensus 147 ~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 222 (959)
...++|++|+|++|.|+......++..+..+++|++|+|++|++... ++..+...++|+.|+|++|.|+......+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 35789999999999997644445667778899999999999999753 35667788999999999999975332222
Q ss_pred ccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCC-----CCEEe--CCCCcCC
Q 002149 223 KGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTS-----LKDLN--LNSNQFV 288 (959)
Q Consensus 223 ~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-----L~~L~--Ls~N~l~ 288 (959)
. ..+...++|++|+|++|.|++.-...+..+.. |+.+. +..|.+.
T Consensus 232 ~---------------------~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 232 A---------------------RAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp H---------------------HHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred H---------------------HHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 1 12445688999999999998766666655422 66676 6666665
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.19 E-value=2.9e-11 Score=133.92 Aligned_cols=79 Identities=16% Similarity=0.247 Sum_probs=69.3
Q ss_pred EEecCC-cccccCcccccCCCCCcEEeccC-CcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCc
Q 002149 84 IQVSSV-GLKGTLPQNLNQLSKLENIGLQK-NQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSN 160 (959)
Q Consensus 84 l~l~~~-~l~g~~~~~l~~l~~L~~L~Ls~-N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 160 (959)
++++++ +|+ .+|. |..+++|++|+|++ |.|+++++ .|.++++|++|+|++|+|+++++.+|.+|++|++|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 355666 677 4788 99999999999996 99999887 6999999999999999999999999999999999999999
Q ss_pred ccCC
Q 002149 161 NFNA 164 (959)
Q Consensus 161 ~l~~ 164 (959)
+|++
T Consensus 91 ~l~~ 94 (347)
T 2ifg_A 91 ALES 94 (347)
T ss_dssp CCSC
T ss_pred ccce
Confidence 8874
No 401
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.16 E-value=9.6e-11 Score=124.20 Aligned_cols=146 Identities=15% Similarity=0.100 Sum_probs=114.0
Q ss_pred HHHhcCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC-CCCceeEEEEEEeCceEE
Q 002149 607 RNVTKNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR-HRHLVSLLGYSVAGYERL 685 (959)
Q Consensus 607 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 685 (959)
......|+....++.|+++.||++... ++.+++|+...... .....+.+|+++++.+. +..+.++++++......+
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 444567888888999999999999755 68899998764311 12235889999999995 677889999999888999
Q ss_pred EEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------
Q 002149 686 LVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLA------------------------------- 734 (959)
Q Consensus 686 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------- 734 (959)
+||||++|.++.+.+. +......++.+++++|+.||+..
T Consensus 87 lv~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred EEEEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence 9999999999876531 11123468899999999999821
Q ss_pred -------------------------CCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 735 -------------------------HQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 735 -------------------------~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
...++|+|+++.||+++.+..+.|+||+.+.
T Consensus 157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876566799998764
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.12 E-value=1.2e-10 Score=128.94 Aligned_cols=104 Identities=19% Similarity=0.281 Sum_probs=92.8
Q ss_pred EEeccCC-cCCCCCCCccCCCCccEEecCC-CCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeec
Q 002149 107 NIGLQKN-QFRGELPSFSGLSNLKYAYLDG-NNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLS 184 (959)
Q Consensus 107 ~L~Ls~N-~l~~~~~~~~~l~~L~~L~L~~-N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~ 184 (959)
.++++++ .|+.+++ |..+++|++|+|++ |+|+.+++..|.+|++|++|+|++|+|++ ..|..+.++++|+.|+
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~L~ 86 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRF----VAPDAFHFTPRLSRLN 86 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCE----ECTTGGGSCSCCCEEE
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccce----eCHHHhcCCcCCCEEe
Confidence 5789998 8998777 99999999999996 99999999999999999999999999996 3456778999999999
Q ss_pred ccccccCCCCChhhcCCCCCCEEEecCCcCCC
Q 002149 185 CMSCNLAGQLPDFLGNFASLQNLKLSGNNLTG 216 (959)
Q Consensus 185 l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 216 (959)
|++|+|++..+..|..++ |+.|+|++|.+..
T Consensus 87 l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 87 LSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 999999987777777766 9999999999984
No 403
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.07 E-value=3.1e-09 Score=119.73 Aligned_cols=291 Identities=14% Similarity=0.102 Sum_probs=153.5
Q ss_pred ccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCC------
Q 002149 97 QNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWS------ 169 (959)
Q Consensus 97 ~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~------ 169 (959)
.+|.++++|+.+.|.. .++.+.. .|.++++|+.++|.++ ++.|...+|.++.+|+.+.+..+ +..+...+
T Consensus 65 ~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~ 141 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDF 141 (394)
T ss_dssp TTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCC
T ss_pred HHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccc
Confidence 4466666666666653 2444444 4666666666666543 55666666666666665554433 11111111
Q ss_pred ------------CCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccC-CcccccccccC
Q 002149 170 ------------FPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGL-NLVNLWLNDQK 236 (959)
Q Consensus 170 ------------lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~L~~~~~~ 236 (959)
-..++..+++|+.+.+.++ +.......|.++++|+.+.+..| ++......|.+. .+..+.+....
T Consensus 142 ~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~ 219 (394)
T 4fs7_A 142 KEITIPEGVTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSL 219 (394)
T ss_dssp SEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTC
T ss_pred cccccCccccccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCc
Confidence 1234567788888888654 34355567788888888888766 443444444433 23322222111
Q ss_pred CCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCC
Q 002149 237 GGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVP 315 (959)
Q Consensus 237 ~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip 315 (959)
....+......+|+.+.+..+. +..-...|..+..|+.+.+..+... .....|... .++.+.+..+.+...
T Consensus 220 ----~~i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~-- 291 (394)
T 4fs7_A 220 ----YYLGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEK-- 291 (394)
T ss_dssp ----CEECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTT--
T ss_pred ----eEeehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccc--
Confidence 0011123334567777775433 3244456677777777777766443 334444444 355555444322110
Q ss_pred cccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCccccc
Q 002149 316 KSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGT 395 (959)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 395 (959)
.|. ....+..... .+.....-...|..+.+|+.++|.++ +...
T Consensus 292 ------------~F~-----------------------~~~~L~~i~l-~~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I 334 (394)
T 4fs7_A 292 ------------TFY-----------------------GCSSLTEVKL-LDSVKFIGEEAFESCTSLVSIDLPYL-VEEI 334 (394)
T ss_dssp ------------TTT-----------------------TCTTCCEEEE-CTTCCEECTTTTTTCTTCCEECCCTT-CCEE
T ss_pred ------------ccc-----------------------cccccccccc-ccccceechhhhcCCCCCCEEEeCCc-ccEE
Confidence 000 0000000000 00011111234556677888888644 6655
Q ss_pred CCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCC
Q 002149 396 LSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQN 438 (959)
Q Consensus 396 ~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N 438 (959)
...+|.++++|+.++|..| ++..-...|.+|++|+.++|..|
T Consensus 335 ~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 335 GKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred hHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 5677888888888888766 66455567888888888887644
No 404
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.07 E-value=1.4e-10 Score=122.80 Aligned_cols=137 Identities=19% Similarity=0.150 Sum_probs=101.2
Q ss_pred cCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCC--ceeEEEEEEeCceEEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRH--LVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~ 688 (959)
..|......+.|..+.||++...+|+.+++|..... ....+.+|+++++.+.+.+ +.+++++...+...++||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 344443333466679999998777888999986543 1245778999999996545 456888888877889999
Q ss_pred EecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 002149 689 EYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLA---------------------------------- 734 (959)
Q Consensus 689 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------- 734 (959)
||++|.++. .. . .+ ...++.++++.|..||+..
T Consensus 95 e~i~G~~l~--~~---~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T 1nd4_A 95 GEVPGQDLL--SS---H-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE 161 (264)
T ss_dssp ECCSSEETT--TS---C-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred EecCCcccC--cC---c-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 999998884 21 1 11 2357788888888888732
Q ss_pred ---------------------CCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 735 ---------------------HQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 735 ---------------------~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
...++|+|++|.||+++.+..+.|+|||.+.
T Consensus 162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999877667799999764
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.93 E-value=1.4e-08 Score=114.37 Aligned_cols=273 Identities=13% Similarity=0.078 Sum_probs=173.9
Q ss_pred CCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeeccccc-----
Q 002149 115 FRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSC----- 188 (959)
Q Consensus 115 l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n----- 188 (959)
++.+.. +|.++.+|+.+.|.. .++.|...+|.++++|+.++|.+| ++.++. ..+..+.+|+.+.+..+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~----~aF~~c~~L~~i~~p~~l~~i~ 132 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGR----CTFSGCYALKSILLPLMLKSIG 132 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECT----TTTTTCTTCCCCCCCTTCCEEC
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccc----hhhcccccchhhcccCceeeec
Confidence 444444 699999999999975 599999999999999999999866 443322 23455555655544322
Q ss_pred ----------------ccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccC-CcccccccccCCCCcccccccccCCc
Q 002149 189 ----------------NLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGL-NLVNLWLNDQKGGGFTGTIDVLGNMD 251 (959)
Q Consensus 189 ----------------~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~L~~~~~~~~~l~~~~~~l~~l~ 251 (959)
.+......+|.++++|+.+.+.++. .......|.+. +|..+.+... ...+. ...+.++.
T Consensus 133 ~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~--~~~F~~~~ 208 (394)
T 4fs7_A 133 VEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIR--DYCFAECI 208 (394)
T ss_dssp TTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEEC--TTTTTTCT
T ss_pred ceeeecccccccccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeC--chhhcccc
Confidence 1111224578889999999998664 33555566554 4555544322 11111 13478889
Q ss_pred CCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCcccccccccccCccc
Q 002149 252 QLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSYSSNAFC 330 (959)
Q Consensus 252 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~~~~~~~ 330 (959)
.|+.+.+..+... +.+.+....+|+.+.+..+ ++......+... .|+.+.+..+... ++. ..|.
T Consensus 209 ~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~--i~~----------~~F~ 273 (394)
T 4fs7_A 209 LLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR--IGG----------SLFY 273 (394)
T ss_dssp TCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE--ECS----------CTTT
T ss_pred ccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce--eec----------cccc
Confidence 9999988877654 4455556688999998754 343444556555 5888888766442 111 1110
Q ss_pred CCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcCcCCEEe
Q 002149 331 QPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIK 410 (959)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 410 (959)
. ...+...... ........+..+.+|+.+.+.++ +......+|.++.+|+.++
T Consensus 274 ~-----------------------~~~l~~~~~~---~~~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~ 326 (394)
T 4fs7_A 274 N-----------------------CSGLKKVIYG---SVIVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSID 326 (394)
T ss_dssp T-----------------------CTTCCEEEEC---SSEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEEC
T ss_pred c-----------------------ccccceeccC---ceeeccccccccccccccccccc-cceechhhhcCCCCCCEEE
Confidence 0 0000000000 00112234566789999999765 6656678899999999999
Q ss_pred CcccccccccCCCccCCCCCCeEeCCCCccC
Q 002149 411 LQSNNISGQIPTNWTNLKSLTLLDLSQNNLS 441 (959)
Q Consensus 411 L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~ 441 (959)
|.++ ++..-...|.+|++|+.++|..| ++
T Consensus 327 lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~ 355 (394)
T 4fs7_A 327 LPYL-VEEIGKRSFRGCTSLSNINFPLS-LR 355 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEECCCTT-CC
T ss_pred eCCc-ccEEhHHhccCCCCCCEEEECcc-cc
Confidence 9754 77555678999999999999876 44
No 406
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.86 E-value=7.6e-09 Score=114.92 Aligned_cols=143 Identities=15% Similarity=0.205 Sum_probs=107.3
Q ss_pred ccCcccccCceEEEEEEEcCCcEEEEEEcc--cccccHHHHHHHHHHHHHHHhcC--CCCceeEEEEEEeC---ceEEEE
Q 002149 615 SENELGRGGFGVVYKGELDDGTKIAVKRME--AGVISKKAVDEFHSEIAVLSKVR--HRHLVSLLGYSVAG---YERLLV 687 (959)
Q Consensus 615 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv 687 (959)
..+.++.|.++.||+.... +..+++|+.. .... ......+.+|+++++.+. +..+.+++.++.+. ...++|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 4567999999999999876 4678888765 3211 122456889999999997 45678899888776 347899
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLA--------------------------------- 734 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------- 734 (959)
|||++|..+.+.. ...++..++..++.++++.|+.||...
T Consensus 120 me~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 120 MEFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 9999988774321 134678889999999999999999731
Q ss_pred ----------------------CCCeEecCCCCCCEEECCCCc--EEEeecccccc
Q 002149 735 ----------------------HQSFIHRDLKSSNILLGDDFR--AKVSDFGLVKL 766 (959)
Q Consensus 735 ----------------------~~~ivH~Dik~~NiLl~~~~~--~ki~DfGla~~ 766 (959)
...++|+|+++.||+++.++. +.|+||+.+..
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999987653 68999998864
No 407
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.86 E-value=7.7e-08 Score=108.23 Aligned_cols=60 Identities=15% Similarity=0.290 Sum_probs=29.8
Q ss_pred CCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCc
Q 002149 378 TNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNN 439 (959)
Q Consensus 378 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~ 439 (959)
.+.+|+.++|..+ ++.....+|.++.+|+++.|..+ ++..-...|.+|++|+.+++.+|.
T Consensus 309 ~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 309 GCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred CCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 3345555555433 44334445555555555555433 442223445555555555555543
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=4.1e-10 Score=124.11 Aligned_cols=202 Identities=17% Similarity=0.227 Sum_probs=98.2
Q ss_pred CcEEEEEecCCcccc-c-------CcccccCCCCCcEEeccCCcCCC---------CCC-CccCCCCccEEecCCCCCCC
Q 002149 79 SRVTQIQVSSVGLKG-T-------LPQNLNQLSKLENIGLQKNQFRG---------ELP-SFSGLSNLKYAYLDGNNFDT 140 (959)
Q Consensus 79 ~~v~~l~l~~~~l~g-~-------~~~~l~~l~~L~~L~Ls~N~l~~---------~~~-~~~~l~~L~~L~L~~N~l~~ 140 (959)
.+|+.|.+...++.| . +..++..+++|+.|.+..+.... .+. -+..+++|+.|+|++|.-..
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 367778777665553 2 23445667888888886654321 111 13455667777776663122
Q ss_pred CChhhhcCCCCCcEEEccCcccCCCCCCCCCccc--cCccccCeecccc--cccCCC-----CChhh--cCCCCCCEEEe
Q 002149 141 IPADFFDGLENLQVLALDSNNFNASKGWSFPKGL--QSSAQLTNLSCMS--CNLAGQ-----LPDFL--GNFASLQNLKL 209 (959)
Q Consensus 141 i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l--~~l~~L~~L~l~~--n~l~~~-----~p~~l--~~l~~L~~L~L 209 (959)
+++ +. +++|++|+|..+.+... ....+ ..+++|+.|+|+. |+..+. +...+ ..+++|+.|+|
T Consensus 187 l~~--~~-~~~L~~L~L~~~~l~~~----~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L 259 (362)
T 2ra8_A 187 IGK--KP-RPNLKSLEIISGGLPDS----VVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGI 259 (362)
T ss_dssp CCS--CB-CTTCSEEEEECSBCCHH----HHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEE
T ss_pred ecc--cc-CCCCcEEEEecCCCChH----HHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeC
Confidence 332 22 56666666666655421 11111 1455566665532 111111 00111 13456666666
Q ss_pred cCCcCCCCCCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCcccccc----CchhhcCCCCCCEEeCCCC
Q 002149 210 SGNNLTGPIPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGT----IPESFGKLTSLKDLNLNSN 285 (959)
Q Consensus 210 s~N~l~~~~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N 285 (959)
.+|.+....+..+. ....+++|++|+|+.|.|++. ++..+..+++|+.|+|++|
T Consensus 260 ~~~~i~~~~~~~la----------------------~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n 317 (362)
T 2ra8_A 260 VDAEEQNVVVEMFL----------------------ESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYN 317 (362)
T ss_dssp ESCTTHHHHHHHHH----------------------HCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSB
T ss_pred CCCCCchHHHHHHH----------------------hCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCC
Confidence 66655432211110 012346666666666666543 2333344566666666666
Q ss_pred cCCCCCccccccccCCeEeCCCCc
Q 002149 286 QFVGLIPPSLASLSLDHLDLNNNM 309 (959)
Q Consensus 286 ~l~~~~p~~~~~~~L~~L~L~~N~ 309 (959)
.|+...-..+...-...+++++|+
T Consensus 318 ~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 318 YLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp BCCHHHHHHHHHHCCSEEECCSBC
T ss_pred cCCHHHHHHHHHHcCCEEEecCCc
Confidence 665433333332112445665554
No 409
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.80 E-value=3.8e-09 Score=114.44 Aligned_cols=186 Identities=16% Similarity=0.229 Sum_probs=123.0
Q ss_pred cCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC-CCC--ceeEEEEEEeCc---eEEEEEE
Q 002149 616 ENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR-HRH--LVSLLGYSVAGY---ERLLVYE 689 (959)
Q Consensus 616 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e 689 (959)
.+.++.|....||+.. +.+++|+-.. ......+.+|+++++.+. +.. +.+++.+..... ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 4568999999999873 5688897542 244567899999999984 333 345555443332 3478999
Q ss_pred ecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 002149 690 YMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLA----------------------------------- 734 (959)
Q Consensus 690 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------- 734 (959)
+++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 97 ~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 97 KIKGVPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp CCCCEECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred ccCCeECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 999988865432 34677888889999999999999611
Q ss_pred --------------------CCCeEecCCCCCCEEECC--CCcEEEeeccccccCCCCCcceee-------------ccc
Q 002149 735 --------------------HQSFIHRDLKSSNILLGD--DFRAKVSDFGLVKLAPDSERSVVT-------------RLA 779 (959)
Q Consensus 735 --------------------~~~ivH~Dik~~NiLl~~--~~~~ki~DfGla~~~~~~~~~~~~-------------~~~ 779 (959)
...++|+|+++.||+++. ...+.|+||+.+........-... ...
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHH
Confidence 135799999999999998 556889999988654221100000 000
Q ss_pred ccccccc-ccccccCCCCccchHHHHHHHHHHHHhCCCCC
Q 002149 780 GTFGYLA-PEYAVTGKITTKVDVFSFGVVLMELLTGLMAL 818 (959)
Q Consensus 780 gt~~y~a-PE~~~~~~~~~~~DvwSlG~ll~elltg~~p~ 818 (959)
...++.. |+.... .....+.|++|.++|++.+|..+|
T Consensus 250 ~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 250 NHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0011111 221111 122368999999999999997654
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.74 E-value=2.1e-07 Score=104.55 Aligned_cols=60 Identities=12% Similarity=0.158 Sum_probs=27.4
Q ss_pred cCCCCcccEEECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCCc
Q 002149 376 CGTNSKLTVLNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQNN 439 (959)
Q Consensus 376 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N~ 439 (959)
|..+.+|+.+.|..+ +......+|.++++|+.+++.+|.... ..+..+..|+.+.+..|.
T Consensus 330 F~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 330 FAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp TTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC---------
T ss_pred hhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 344456666666443 443444556666666666666655431 244555556655555443
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.70 E-value=4.2e-09 Score=115.99 Aligned_cols=183 Identities=14% Similarity=0.153 Sum_probs=124.7
Q ss_pred CcEEEEEecCCcc---------cccCcccccCCCCCcEEeccCCcCCCCCCCccCCCCccEEecCCCCCCCCChhhhc--
Q 002149 79 SRVTQIQVSSVGL---------KGTLPQNLNQLSKLENIGLQKNQFRGELPSFSGLSNLKYAYLDGNNFDTIPADFFD-- 147 (959)
Q Consensus 79 ~~v~~l~l~~~~l---------~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~-- 147 (959)
.+++.|.+.+... .+.+...+..+++|+.|+|++|.-... +.+. +++|++|+|..+.+..-....+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~l-~~~~-~~~L~~L~L~~~~l~~~~l~~l~~~ 216 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSI-GKKP-RPNLKSLEIISGGLPDSVVEDILGS 216 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCBC-CSCB-CTTCSEEEEECSBCCHHHHHHHHHS
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCcee-cccc-CCCCcEEEEecCCCChHHHHHHHHc
Confidence 4788888865433 224667778899999999999831122 3343 89999999999988753333443
Q ss_pred CCCCCcEEEccC--cccCCCC-CCCCCccc--cCccccCeecccccccCCCCChhhc---CCCCCCEEEecCCcCCCCCC
Q 002149 148 GLENLQVLALDS--NNFNASK-GWSFPKGL--QSSAQLTNLSCMSCNLAGQLPDFLG---NFASLQNLKLSGNNLTGPIP 219 (959)
Q Consensus 148 ~l~~L~~L~Ls~--N~l~~~~-~~~lp~~l--~~l~~L~~L~l~~n~l~~~~p~~l~---~l~~L~~L~Ls~N~l~~~~p 219 (959)
.+++|++|+|+. |...+.. ...+...+ ..+++|+.|+|.+|.+....+..+. .+++|++|+|+.|.|+...+
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~ 296 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGA 296 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHH
Confidence 799999999964 3322111 11122223 3578999999999998754444443 47899999999999885433
Q ss_pred cccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcC-CCCCCEEeCCCCc
Q 002149 220 ESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGK-LTSLKDLNLNSNQ 286 (959)
Q Consensus 220 ~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~ 286 (959)
..+. ..+.++++|+.|+|++|.|+...-..+.. + ...++++.|+
T Consensus 297 ~~L~---------------------~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 297 RLLL---------------------DHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHH---------------------TTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHH---------------------hhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 2221 11356789999999999998655455554 3 4679999988
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.62 E-value=1.2e-06 Score=97.87 Aligned_cols=282 Identities=12% Similarity=0.121 Sum_probs=157.3
Q ss_pred cEEEEEecCCcccccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEcc
Q 002149 80 RVTQIQVSSVGLKGTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALD 158 (959)
Q Consensus 80 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 158 (959)
++++|.+.. +++..-..+|.++.+|+.++|..+ ++.+.. .|.++ +|+.+.+.. ++..|...+|... +|+.+++.
T Consensus 47 ~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~-~l~~I~~~aF~~~-~L~~i~lp 121 (379)
T 4h09_A 47 RISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGME-RVKKFGDYVFQGT-DLDDFEFP 121 (379)
T ss_dssp GCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECT-TCCEECTTTTTTC-CCSEEECC
T ss_pred CCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCc-eeeEeccceeccC-CcccccCC
Confidence 566666643 455344456777788888877643 554444 57665 577776654 4777777777664 67777776
Q ss_pred CcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCccc------------cc-C
Q 002149 159 SNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESF------------KG-L 225 (959)
Q Consensus 159 ~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~------------~~-l 225 (959)
.+- .. +........+|+.+.+.. +++......|....+|+.+.+..+.........+ .. .
T Consensus 122 ~~~-~~-----i~~~~F~~~~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
T 4h09_A 122 GAT-TE-----IGNYIFYNSSVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAK 194 (379)
T ss_dssp TTC-CE-----ECTTTTTTCCCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTC
T ss_pred Ccc-cc-----ccccccccceeeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceeccccccc
Confidence 552 21 222222223455544432 2333445566677777777776654431111100 00 0
Q ss_pred CcccccccccCCCCcccccccccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEe
Q 002149 226 NLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLD 304 (959)
Q Consensus 226 ~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~ 304 (959)
.+....+ ...........+....+|+.+.+..+ ++.....+|..+..|+.+.+..+ ++.+....|... +|+.+.
T Consensus 195 ~~~~~~~---~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 195 TGTEFTI---PSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp CCSEEEC---CTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccccc---ccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 0000000 00000000122444556666666544 33244455666666777666554 444444455544 366655
Q ss_pred CCCCcCCCCCCcccccccccccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccE
Q 002149 305 LNNNMFMGPVPKSKAYKYSYSSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTV 384 (959)
Q Consensus 305 L~~N~l~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~ 384 (959)
+..+ ++ ......|..+.+|+.
T Consensus 270 l~~~-i~----------------------------------------------------------~i~~~aF~~c~~L~~ 290 (379)
T 4h09_A 270 FYAK-VK----------------------------------------------------------TVPYLLCSGCSNLTK 290 (379)
T ss_dssp ECCC-CS----------------------------------------------------------EECTTTTTTCTTCCE
T ss_pred cccc-ce----------------------------------------------------------ecccccccccccccc
Confidence 5332 11 011123455688999
Q ss_pred EECCCCcccccCCccccCcCcCCEEeCcccccccccCCCccCCCCCCeEeCCCC
Q 002149 385 LNLPNFNLSGTLSPSVGNLDSLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQN 438 (959)
Q Consensus 385 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N 438 (959)
+.+.++.+......+|.++.+|+.+.|..+ ++..-...|.+|++|+.+.+..+
T Consensus 291 i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 291 VVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 999988888777788999999999999755 66455567999999998887644
No 413
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.53 E-value=5.4e-07 Score=98.08 Aligned_cols=137 Identities=17% Similarity=0.233 Sum_probs=103.4
Q ss_pred CCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCC----CCceeEEEEEEeCceEEEE
Q 002149 612 NFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRH----RHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 612 ~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv 687 (959)
.+...+.++.|....||+. |+.+++|+... ......+.+|.++++.+.+ ..+.+++++ ...++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 5566778999999999998 67788887542 2334568899999999976 224455555 456899
Q ss_pred EEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC--------------------------------
Q 002149 688 YEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAH-------------------------------- 735 (959)
Q Consensus 688 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-------------------------------- 735 (959)
|||++|.++.+... ..++..++..++.++++.++.||+...
T Consensus 106 me~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 106 MKYIKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EECCCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EeecCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 99999988864321 345677788888999999999885321
Q ss_pred ----------------------------CCeEecCCCCCCEEECCCCcEEEeeccccccC
Q 002149 736 ----------------------------QSFIHRDLKSSNILLGDDFRAKVSDFGLVKLA 767 (959)
Q Consensus 736 ----------------------------~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~ 767 (959)
..++|+|++|.||+++.+..+.|+||+.+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998666799999988643
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.52 E-value=2.9e-09 Score=111.06 Aligned_cols=158 Identities=19% Similarity=0.248 Sum_probs=88.1
Q ss_pred CcceEecCC--cEEEEEecC---CcccccCc-ccccCCCCCcEEeccCCcCCCCCC--CccCCCCccE--EecCCCCCCC
Q 002149 71 WKHVFCSNS--RVTQIQVSS---VGLKGTLP-QNLNQLSKLENIGLQKNQFRGELP--SFSGLSNLKY--AYLDGNNFDT 140 (959)
Q Consensus 71 w~gv~C~~~--~v~~l~l~~---~~l~g~~~-~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~--L~L~~N~l~~ 140 (959)
|.|+.|+.. +|+.+...+ ..+.+.++ ..+..|+. .|....|...+... .|...+.|.. ++++.|+...
T Consensus 80 ~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~ 157 (267)
T 3rw6_A 80 VNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSC 157 (267)
T ss_dssp TTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHHH
T ss_pred cCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHHH
Confidence 889999754 676665544 23444443 23333332 23334444433322 2455555655 6666665433
Q ss_pred CC---hhhhcCCCCCcEEEccCcccCCCCCCCCCccccCccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCC
Q 002149 141 IP---ADFFDGLENLQVLALDSNNFNASKGWSFPKGLQSSAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGP 217 (959)
Q Consensus 141 i~---~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 217 (959)
++ .....++++|+.|+|++|+|+++. .+|..+..+++|+.|+|++|+|++.
T Consensus 158 ~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~--------------------------~l~~~~~~l~~L~~L~Ls~N~i~~~ 211 (267)
T 3rw6_A 158 MAATLRIIEENIPELLSLNLSNNRLYRLD--------------------------DMSSIVQKAPNLKILNLSGNELKSE 211 (267)
T ss_dssp HHHHHHHHHHHCTTCCEEECTTSCCCCCG--------------------------GGTTHHHHSTTCCEEECTTSCCCSG
T ss_pred HHHHHHHHHhhCCCCCEEECCCCCCCCCc--------------------------cchhHHhhCCCCCEEECCCCccCCc
Confidence 22 222345667777777777665321 2345566677777888888877743
Q ss_pred CCcccccCCcccccccccCCCCcccccccccCCcCCcEEEccCccccccCc-------hhhcCCCCCCEEe
Q 002149 218 IPESFKGLNLVNLWLNDQKGGGFTGTIDVLGNMDQLRTLWLHGNHFSGTIP-------ESFGKLTSLKDLN 281 (959)
Q Consensus 218 ~p~~~~~l~l~~L~~~~~~~~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p-------~~~~~l~~L~~L~ 281 (959)
..+. .+..+ +|++|+|++|.+.+.+| ..+..+++|+.||
T Consensus 212 --~~l~----------------------~l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 212 --RELD----------------------KIKGL-KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp --GGGG----------------------GGTTS-CCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred --hhhh----------------------hcccC-CcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 1111 12233 67778888888776554 2456677777765
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.44 E-value=1.3e-08 Score=101.12 Aligned_cols=40 Identities=18% Similarity=0.167 Sum_probs=19.4
Q ss_pred CCcCCcEEEc--cCcccccc----CchhhcCCCCCCEEeCCCCcCC
Q 002149 249 NMDQLRTLWL--HGNHFSGT----IPESFGKLTSLKDLNLNSNQFV 288 (959)
Q Consensus 249 ~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 288 (959)
..++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 119 ~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 119 SNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred hCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3345555555 55555432 2233334455555555555543
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.41 E-value=1.2e-08 Score=101.38 Aligned_cols=72 Identities=18% Similarity=0.169 Sum_probs=48.2
Q ss_pred ccCcccccCCCCCcEEeccCC-cCCCCC-----CCccCCCCccEEecCCCCCCCCC----hhhhcCCCCCcEEEccCccc
Q 002149 93 GTLPQNLNQLSKLENIGLQKN-QFRGEL-----PSFSGLSNLKYAYLDGNNFDTIP----ADFFDGLENLQVLALDSNNF 162 (959)
Q Consensus 93 g~~~~~l~~l~~L~~L~Ls~N-~l~~~~-----~~~~~l~~L~~L~L~~N~l~~i~----~~~~~~l~~L~~L~Ls~N~l 162 (959)
..+...+...++|++|+|++| .|.... ..+...++|++|+|++|+|+.-. ...+...++|++|+|++|.|
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 345566777888888888888 776421 13555677888888888776422 23355566777777777777
Q ss_pred CC
Q 002149 163 NA 164 (959)
Q Consensus 163 ~~ 164 (959)
..
T Consensus 106 ~~ 107 (185)
T 1io0_A 106 SG 107 (185)
T ss_dssp CH
T ss_pred CH
Confidence 64
No 417
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.30 E-value=1.5e-06 Score=92.69 Aligned_cols=79 Identities=23% Similarity=0.295 Sum_probs=61.7
Q ss_pred CCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCC---CceeEEEEEEeCceEEEEE
Q 002149 612 NFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHR---HLVSLLGYSVAGYERLLVY 688 (959)
Q Consensus 612 ~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~ 688 (959)
.....+.|+.|.++.||++...+|+.++||+.... .......+.+|++.++.+++. .+.+++++. ..++||
T Consensus 16 ~~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~--~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDD--APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTT--CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred CccceeeeCCcchhheEEEEeCCCCeEEEEecCCC--CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 34456789999999999999888999999986432 122235688999999999865 577888763 368999
Q ss_pred EecCCCch
Q 002149 689 EYMPQGAL 696 (959)
Q Consensus 689 e~~~~gsL 696 (959)
||++++.+
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99998875
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.26 E-value=7.9e-06 Score=88.07 Aligned_cols=136 Identities=18% Similarity=0.190 Sum_probs=97.2
Q ss_pred cCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCC---CceeEEEEEE-eCceEEEEEEec
Q 002149 616 ENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHR---HLVSLLGYSV-AGYERLLVYEYM 691 (959)
Q Consensus 616 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~ 691 (959)
.+.++.|....||+. |+.+++|+-. .......+.+|+++++.+.+. .+.+++.++. .....++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 456788888899998 5678888742 234456789999999999753 3566777764 344578999999
Q ss_pred CCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 002149 692 PQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSL-------------------------------------- 733 (959)
Q Consensus 692 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------- 733 (959)
+|..+.+... ..++..++..++.++++.|+.||+.
T Consensus 96 ~G~~l~~~~~-------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 96 QGQILGEDGM-------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CSEECHHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred CCeECchhhh-------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9988865321 2245556666666666666666652
Q ss_pred -------------------CCCCeEecCCCCCCEEECC---CCc-EEEeecccccc
Q 002149 734 -------------------AHQSFIHRDLKSSNILLGD---DFR-AKVSDFGLVKL 766 (959)
Q Consensus 734 -------------------~~~~ivH~Dik~~NiLl~~---~~~-~ki~DfGla~~ 766 (959)
....++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1235699999999999987 455 58999997754
No 419
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.18 E-value=3.3e-07 Score=95.50 Aligned_cols=53 Identities=21% Similarity=0.336 Sum_probs=27.2
Q ss_pred CcccEEECCCCcccccCCccccCcC--cCCEEeCcccccccccCC-------CccCCCCCCeEe
Q 002149 380 SKLTVLNLPNFNLSGTLSPSVGNLD--SLTQIKLQSNNISGQIPT-------NWTNLKSLTLLD 434 (959)
Q Consensus 380 ~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~g~~p~-------~l~~l~~L~~L~ 434 (959)
++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|. .+..+++|+.||
T Consensus 196 ~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 196 PNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp TTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3444444444444433 1122222 566666666666655542 255666666665
No 420
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.15 E-value=1.1e-05 Score=89.09 Aligned_cols=78 Identities=10% Similarity=0.087 Sum_probs=58.7
Q ss_pred CCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCC--ceeEEEEEEeC-ceEEEEE
Q 002149 612 NFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRH--LVSLLGYSVAG-YERLLVY 688 (959)
Q Consensus 612 ~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~ 688 (959)
.....+.++.|....+|+... +++.+++|..... ..+.+|+.+++.+.... +.++++++... ...++||
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~ 113 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCIS 113 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEE
T ss_pred CCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEE
Confidence 344567789999999999976 4788999976432 24788999999996543 56777777654 5679999
Q ss_pred EecCCCchh
Q 002149 689 EYMPQGALS 697 (959)
Q Consensus 689 e~~~~gsL~ 697 (959)
||++|..+.
T Consensus 114 e~l~G~~l~ 122 (362)
T 3ovc_A 114 RRAQGVTLQ 122 (362)
T ss_dssp ECCCSEETT
T ss_pred EecCCCCcc
Confidence 999876653
No 421
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.12 E-value=0.0001 Score=82.04 Aligned_cols=267 Identities=12% Similarity=0.090 Sum_probs=146.6
Q ss_pred cccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccCCCCCCCCCccccC
Q 002149 98 NLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFNASKGWSFPKGLQS 176 (959)
Q Consensus 98 ~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~lp~~l~~ 176 (959)
.+....+|+.+.+.. .++.+.. .|.++.+|+.+.|.. .++.|...+|.+. +|+.+.+..| +.. +......
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~-----I~~~aF~ 111 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKK-----FGDYVFQ 111 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCE-----ECTTTTT
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeE-----eccceec
Confidence 455667888888864 3555555 699999999999975 4888999999887 6888877654 443 3333333
Q ss_pred ccccCeecccccccCCCCChhhcCCCCCCEEEecCCcCCCCCCcccccC-CcccccccccCCCCcc----------cccc
Q 002149 177 SAQLTNLSCMSCNLAGQLPDFLGNFASLQNLKLSGNNLTGPIPESFKGL-NLVNLWLNDQKGGGFT----------GTID 245 (959)
Q Consensus 177 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~l~~L~~~~~~~~~l~----------~~~~ 245 (959)
..+|+.+.+.++ +.......|.+. +|+.+.+..+ ++......|... .+.............. ....
T Consensus 112 ~~~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (379)
T 4h09_A 112 GTDLDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILE 188 (379)
T ss_dssp TCCCSEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEE
T ss_pred cCCcccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceec
Confidence 446777777643 332333344443 4555554433 222222232211 1111111110000000 0001
Q ss_pred cccCCcCCcEEEccCccccccCchhhcCCCCCCEEeCCCCcCCCCCccccccc-cCCeEeCCCCcCCCCCCccccccccc
Q 002149 246 VLGNMDQLRTLWLHGNHFSGTIPESFGKLTSLKDLNLNSNQFVGLIPPSLASL-SLDHLDLNNNMFMGPVPKSKAYKYSY 324 (959)
Q Consensus 246 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~N~l~~~ip~~~~~~~~~ 324 (959)
.+.....+..+.+..+.-. .....+....+|+.+.+..+ +.......+... .|+.+.+..+ ++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~------------- 252 (379)
T 4h09_A 189 SYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT------------- 252 (379)
T ss_dssp ECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-------------
T ss_pred cccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-------------
Confidence 1222233333333332221 33344445555555555433 222333333333 3555554332 11
Q ss_pred ccCcccCCCCCCCCchhhHHHHhhccCCCCCcccccccCCCCCCCcccccccCCCCcccEEECCCCcccccCCccccCcC
Q 002149 325 SSNAFCQPTEGVPCAPEVMALIDFLGGLNYPPRLVTSWSGNDPCKSWLGLSCGTNSKLTVLNLPNFNLSGTLSPSVGNLD 404 (959)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 404 (959)
..-...+..+.+|+.+.+..+ +.......|.+++
T Consensus 253 ---------------------------------------------~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 253 ---------------------------------------------SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp ---------------------------------------------EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ---------------------------------------------EeCccccceeehhcccccccc-ceecccccccccc
Confidence 001123345578888988654 6656667899999
Q ss_pred cCCEEeCcccccccccCCCccCCCCCCeEeCCCC
Q 002149 405 SLTQIKLQSNNISGQIPTNWTNLKSLTLLDLSQN 438 (959)
Q Consensus 405 ~L~~L~L~~N~l~g~~p~~l~~l~~L~~L~Ls~N 438 (959)
+|+.+.+.+|.++..-...|.+|.+|+.++|..+
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 9999999999998666678999999999999754
No 422
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.09 E-value=1.9e-05 Score=83.38 Aligned_cols=134 Identities=16% Similarity=0.178 Sum_probs=96.9
Q ss_pred cccccCce-EEEEEEEc-CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC-CCCceeEEEEEEeCceEEEEEEecCCC
Q 002149 618 ELGRGGFG-VVYKGELD-DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR-HRHLVSLLGYSVAGYERLLVYEYMPQG 694 (959)
Q Consensus 618 ~lG~G~fg-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 694 (959)
.+..|..| .||+.... ++..+.+|+-.. .....+.+|...++.+. +--+.++++++.+.+..++|||++++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 34455555 68988654 456788997543 23556889999999984 334678899999999999999999998
Q ss_pred chhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 002149 695 ALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLA---------------------------------------- 734 (959)
Q Consensus 695 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------- 734 (959)
++.+..... ......++.++++.|..||...
T Consensus 106 ~~~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 106 TAFQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp EHHHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred cccccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 887654221 1223456677777777777521
Q ss_pred ---------------CCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 735 ---------------HQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 735 ---------------~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
...++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1137899999999999987777899999764
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.86 E-value=1.3e-05 Score=88.47 Aligned_cols=83 Identities=10% Similarity=0.011 Sum_probs=55.9
Q ss_pred cCcc-cccCceEEEEEEEc-------CCcEEEEEEcccccc-cHHHHHHHHHHHHHHHhcC-C--CCceeEEEEEEeC--
Q 002149 616 ENEL-GRGGFGVVYKGELD-------DGTKIAVKRMEAGVI-SKKAVDEFHSEIAVLSKVR-H--RHLVSLLGYSVAG-- 681 (959)
Q Consensus 616 ~~~l-G~G~fg~V~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 681 (959)
.+.| +.|....+|+.... +++.+++|+...... .......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998654 266788887654210 0001235678999998884 3 3567788887655
Q ss_pred -ceEEEEEEecCCCchhh
Q 002149 682 -YERLLVYEYMPQGALSK 698 (959)
Q Consensus 682 -~~~~lv~e~~~~gsL~~ 698 (959)
...++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 34689999998876643
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.73 E-value=0.00028 Score=77.19 Aligned_cols=142 Identities=18% Similarity=0.236 Sum_probs=81.1
Q ss_pred CcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCC--CCceeEEE------EEEeCceEEEEE
Q 002149 617 NELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRH--RHLVSLLG------YSVAGYERLLVY 688 (959)
Q Consensus 617 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~------~~~~~~~~~lv~ 688 (959)
+.|+.|..+.||+....+| .+++|+.... . .++..|+++++.+.. -.+.+++. +....+..++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP---E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC---H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC---H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 4566677899999987654 5889987642 2 233455666665531 12333332 223466789999
Q ss_pred EecCCCchh--------------hHHhhcccCC--C-------CCCCHHHH-----------------------------
Q 002149 689 EYMPQGALS--------------KHIFHWKSLN--L-------EPLSWKRR----------------------------- 716 (959)
Q Consensus 689 e~~~~gsL~--------------~~l~~~~~~~--~-------~~l~~~~~----------------------------- 716 (959)
||++|..+. ..+|.....- . ..-.|...
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999886542 1122211100 0 01123211
Q ss_pred --HHHHHHHHHHHHHHHh----------cCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 717 --LNIALDVARGMEYLHS----------LAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 717 --~~i~~~ia~gL~yLH~----------~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
..+..++.+++++|+. .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111234446666763 124789999999999999888899999999764
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.61 E-value=0.00017 Score=80.83 Aligned_cols=77 Identities=14% Similarity=0.132 Sum_probs=49.7
Q ss_pred cCcccccCceEEEEEEEc-CCcEEEEEEcccccc--cH---HHHHHHHHHHHHHHhcCC--CC-ceeEEEEEEeCceEEE
Q 002149 616 ENELGRGGFGVVYKGELD-DGTKIAVKRMEAGVI--SK---KAVDEFHSEIAVLSKVRH--RH-LVSLLGYSVAGYERLL 686 (959)
Q Consensus 616 ~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~---~~~~~~~~E~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 686 (959)
.+.+|.|.++.||++... +++.++||....... .. .....+..|.++++.+.. +. +.+++.+ +....++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999654 468899997653211 00 123456789999988842 43 3455544 3445689
Q ss_pred EEEecCCC
Q 002149 687 VYEYMPQG 694 (959)
Q Consensus 687 v~e~~~~g 694 (959)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 426
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.51 E-value=0.0002 Score=80.89 Aligned_cols=77 Identities=18% Similarity=0.210 Sum_probs=48.4
Q ss_pred CCCeEecCCCCCCEEECCCCcEEEeeccccccCCCCCcceeecccc--ccccccccccccCC---CCccchHHHHHHHHH
Q 002149 735 HQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDSERSVVTRLAG--TFGYLAPEYAVTGK---ITTKVDVFSFGVVLM 809 (959)
Q Consensus 735 ~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~---~~~~~DvwSlG~ll~ 809 (959)
...++|+|+++.||+++.++ ++|+||+.+........ ...... ...|.+|+...... -....++.+....+|
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D--la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD--IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH--HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH--HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 37899999999999998876 99999998874432111 000011 23466666553211 122355567777888
Q ss_pred HHHhC
Q 002149 810 ELLTG 814 (959)
Q Consensus 810 elltg 814 (959)
+.+++
T Consensus 308 ~~y~~ 312 (420)
T 2pyw_A 308 NLFNK 312 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.48 E-value=0.00056 Score=73.27 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=92.5
Q ss_pred ccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC---CCCceeEEEEEEeCceEEEEEEec
Q 002149 615 SENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR---HRHLVSLLGYSVAGYERLLVYEYM 691 (959)
Q Consensus 615 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~ 691 (959)
..+.|+.|....+|+.... ++.+++|+-... ....+.+|++.|+.+. ...+.++++++......++||||+
T Consensus 40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEEECCSSSSEEEEEESS-SCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeEEeCCccceeeeEEEEC-CCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 3467899999999999764 678889976532 2556889999999984 356888999988888899999999
Q ss_pred CCCchh--------h---HHhhccc-CCC----------------CCCCHHHHH---HHHH----------------HHH
Q 002149 692 PQGALS--------K---HIFHWKS-LNL----------------EPLSWKRRL---NIAL----------------DVA 724 (959)
Q Consensus 692 ~~gsL~--------~---~l~~~~~-~~~----------------~~l~~~~~~---~i~~----------------~ia 724 (959)
++..+. + .+|.... ... -.-+|.... ++.. .++
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 887642 1 2333211 000 012454321 1111 111
Q ss_pred HHH-HHHHh-cCCCCeEecCCCCCCEEECCCCcEEEeecc
Q 002149 725 RGM-EYLHS-LAHQSFIHRDLKSSNILLGDDFRAKVSDFG 762 (959)
Q Consensus 725 ~gL-~yLH~-~~~~~ivH~Dik~~NiLl~~~~~~ki~DfG 762 (959)
..+ ..|.. .....+||+|+.+.|++++.++ +.|.||.
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 111 23321 1236799999999999999887 8888874
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.46 E-value=0.00031 Score=74.81 Aligned_cols=80 Identities=23% Similarity=0.298 Sum_probs=57.9
Q ss_pred cCCcccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCC---CceeEEEEEEeCceEEEE
Q 002149 611 KNFASENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHR---HLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 611 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv 687 (959)
.....++.+|.|..+.||+.+..+|+.|.+|+-.... ......|.+|++.|+.+.-. -+.+++++. ..++|
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv 88 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLA 88 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC--cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEE
Confidence 4556678899999999999999999999999865431 12234578899999998422 344555542 34789
Q ss_pred EEecCCCch
Q 002149 688 YEYMPQGAL 696 (959)
Q Consensus 688 ~e~~~~gsL 696 (959)
|||++++..
T Consensus 89 ~e~l~~~~~ 97 (288)
T 3f7w_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEeecccCC
Confidence 999987653
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.46 E-value=1.1e-05 Score=79.25 Aligned_cols=19 Identities=32% Similarity=0.385 Sum_probs=10.1
Q ss_pred hhcCCCCCCEEEecCCcCC
Q 002149 197 FLGNFASLQNLKLSGNNLT 215 (959)
Q Consensus 197 ~l~~l~~L~~L~Ls~N~l~ 215 (959)
.+..-+.|++|+|++|.|.
T Consensus 93 aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 93 LIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHHHCSSCCEEECCSSBCC
T ss_pred HHhcCCccCeEecCCCcCC
Confidence 3334455555666666555
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.38 E-value=2.1e-05 Score=77.35 Aligned_cols=121 Identities=10% Similarity=0.100 Sum_probs=82.4
Q ss_pred CcccccCCCCCcEEeccCC-cCCCCC-----CCccCCCCccEEecCCCCCCC----CChhhhcCCCCCcEEEccCcccCC
Q 002149 95 LPQNLNQLSKLENIGLQKN-QFRGEL-----PSFSGLSNLKYAYLDGNNFDT----IPADFFDGLENLQVLALDSNNFNA 164 (959)
Q Consensus 95 ~~~~l~~l~~L~~L~Ls~N-~l~~~~-----~~~~~l~~L~~L~L~~N~l~~----i~~~~~~~l~~L~~L~Ls~N~l~~ 164 (959)
+...+.+-+.|++|+|++| +|.... ..+..-+.|+.|+|++|+|.. -...++...+.|++|+|++|+|..
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3444566678888888875 665321 124555678888888888873 334456677888888888888876
Q ss_pred CCCCCCCccccCccccCeecccccc---cCC----CCChhhcCCCCCCEEEecCCcCC
Q 002149 165 SKGWSFPKGLQSSAQLTNLSCMSCN---LAG----QLPDFLGNFASLQNLKLSGNNLT 215 (959)
Q Consensus 165 ~~~~~lp~~l~~l~~L~~L~l~~n~---l~~----~~p~~l~~l~~L~~L~Ls~N~l~ 215 (959)
.+...+...+..-+.|+.|+|++|. +.. .+...+..-+.|+.|+++.|.+.
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 6555666677777788888887653 232 23455666788999999877654
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.25 E-value=7.8e-05 Score=71.84 Aligned_cols=35 Identities=11% Similarity=0.017 Sum_probs=20.3
Q ss_pred CCcEEEccCcc-ccccCchhhcCCCCCCEEeCCCCc
Q 002149 252 QLRTLWLHGNH-FSGTIPESFGKLTSLKDLNLNSNQ 286 (959)
Q Consensus 252 ~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~ 286 (959)
+|++|+|++|. ++..--..+.++++|++|+|+++.
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 56666666653 554333445566666666666654
No 432
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.23 E-value=0.00014 Score=69.99 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=21.3
Q ss_pred ccCeecccccc-cCCCCChhhcCCCCCCEEEecCCc
Q 002149 179 QLTNLSCMSCN-LAGQLPDFLGNFASLQNLKLSGNN 213 (959)
Q Consensus 179 ~L~~L~l~~n~-l~~~~p~~l~~l~~L~~L~Ls~N~ 213 (959)
+|+.|+|++|. ++..--..+..+++|++|+|+++.
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 35555555542 443333456677888888888874
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.14 E-value=0.00063 Score=62.45 Aligned_cols=38 Identities=26% Similarity=0.479 Sum_probs=32.7
Q ss_pred CCccEEecCCCCCCCCChhhhcCCCCCcEEEccCcccC
Q 002149 126 SNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSNNFN 163 (959)
Q Consensus 126 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~ 163 (959)
.+|++|+|++|+|+.++..+|..+++|++|+|++|.+.
T Consensus 31 ~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 31 VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 35788888888888888888999999999999999875
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.14 E-value=0.0023 Score=69.18 Aligned_cols=160 Identities=13% Similarity=0.155 Sum_probs=89.6
Q ss_pred ecHHHHHHHhcCCcc-----cCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCC--cee
Q 002149 601 ISVQVLRNVTKNFAS-----ENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRH--LVS 673 (959)
Q Consensus 601 ~~~~~~~~~~~~~~~-----~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 673 (959)
++.+++..+..+|.. .+.|+.|....+|+....+| .+++|..... .....+..|++++..+.... +.+
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~----~~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR----VEKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC----CCHHHHHHHHHHHHHHHHCCCCCCc
Confidence 345556666666654 24566788889999987655 6888987642 12234567888888774222 233
Q ss_pred EEEE------EEeCceEEEEEEecCCCchhh--------------HHhhccc-CCCC---C---CCHHHHHH--------
Q 002149 674 LLGY------SVAGYERLLVYEYMPQGALSK--------------HIFHWKS-LNLE---P---LSWKRRLN-------- 718 (959)
Q Consensus 674 l~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~-~~~~---~---l~~~~~~~-------- 718 (959)
++.. ....+..+++|+|++|..+.. .+|.... .... . ..|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 3321 123456789999998765321 1221100 0000 0 11322111
Q ss_pred ----HHHHHHHHHHHHHhc----CCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 719 ----IALDVARGMEYLHSL----AHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 719 ----i~~~ia~gL~yLH~~----~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+...+.+.+++++.. ...+++|+|+.+.||+++.+..+.|+||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 111244556666542 13579999999999999987666899998664
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.86 E-value=0.0019 Score=69.02 Aligned_cols=72 Identities=11% Similarity=0.119 Sum_probs=45.6
Q ss_pred ccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCc-eeEEEEEEeCceEEEEEEec-C
Q 002149 615 SENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHL-VSLLGYSVAGYERLLVYEYM-P 692 (959)
Q Consensus 615 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~ 692 (959)
-.+.|+.|....+|+. +.+++|+..... .......+|+.+++.+....+ .+++++ +.+.-++|+||+ +
T Consensus 22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~---~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGT---EEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAG 91 (301)
T ss_dssp SCEEEESCSSEEEEEE-----TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTT
T ss_pred ceeEcCCcccccccee-----eeEEEECCCCCc---cceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCC
Confidence 3677889999999998 558888765421 111123568888888753333 455554 333457899999 5
Q ss_pred CCch
Q 002149 693 QGAL 696 (959)
Q Consensus 693 ~gsL 696 (959)
+.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 5544
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.80 E-value=0.0032 Score=68.37 Aligned_cols=144 Identities=17% Similarity=0.131 Sum_probs=74.3
Q ss_pred CcccccCceE-EEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCC--CCceeEEEEEEeCceEEEEEEecCC
Q 002149 617 NELGRGGFGV-VYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRH--RHLVSLLGYSVAGYERLLVYEYMPQ 693 (959)
Q Consensus 617 ~~lG~G~fg~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~ 693 (959)
+.|+.|+... +|+....+++.+++|...... ...+..|+.+++.+.. -.+.+++.+..+. -++|||++.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~-----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~ 96 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE-----GGDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGD 96 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT-----TCCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCS
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC-----CccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCC
Confidence 4565555444 667765446777777654321 1234567777777742 2355667663332 2789999976
Q ss_pred CchhhHHhhcc------------------cC---CCCCCCHHHHHH--------------------HHHHHHHHHHHHHh
Q 002149 694 GALSKHIFHWK------------------SL---NLEPLSWKRRLN--------------------IALDVARGMEYLHS 732 (959)
Q Consensus 694 gsL~~~l~~~~------------------~~---~~~~l~~~~~~~--------------------i~~~ia~gL~yLH~ 732 (959)
..+.+.+.... .. ....++...... ....+...++.+..
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 66544332100 00 011122211100 00112222233311
Q ss_pred ---cCCCCeEecCCCCCCEEECCC----CcEEEeeccccccC
Q 002149 733 ---LAHQSFIHRDLKSSNILLGDD----FRAKVSDFGLVKLA 767 (959)
Q Consensus 733 ---~~~~~ivH~Dik~~NiLl~~~----~~~ki~DfGla~~~ 767 (959)
.....++|+|+.+.||+++.+ ..+.|+||+.+...
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 123579999999999999874 68999999987643
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.76 E-value=0.0026 Score=58.25 Aligned_cols=66 Identities=27% Similarity=0.540 Sum_probs=51.0
Q ss_pred CCCCCCCcceEecCCcEEEEEecCCccc-ccCcccccCCCCCcEEeccCCcCCCCCC-CccCCCCccEEecCCCCCC
Q 002149 65 PCGPPCWKHVFCSNSRVTQIQVSSVGLK-GTLPQNLNQLSKLENIGLQKNQFRGELP-SFSGLSNLKYAYLDGNNFD 139 (959)
Q Consensus 65 ~C~~~~w~gv~C~~~~v~~l~l~~~~l~-g~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~ 139 (959)
+||..| .|.. +.++.++++|+ ..+|..+. .+|++|+|++|+|+.+++ .|..+++|++|+|++|.+.
T Consensus 1 ~CP~~C----~C~~---~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 1 PCPAPC----SCAG---TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CCCTTC----EEET---TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CcCCCC----EEcC---CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 365444 5653 36788888886 45665543 368999999999999888 5899999999999999875
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.71 E-value=0.016 Score=62.47 Aligned_cols=144 Identities=11% Similarity=0.058 Sum_probs=82.5
Q ss_pred CcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCC--ceeEEEE-----EEeCceEEEEEE
Q 002149 617 NELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRH--LVSLLGY-----SVAGYERLLVYE 689 (959)
Q Consensus 617 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lv~e 689 (959)
..++ |....||+....+|+.+++|.......+ ...+..|..++..+.... +++++.. ....+..++|||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~---~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWT---ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSC---HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCC---HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 3466 7788999987777778999987643222 345667888888874222 3444432 223456688999
Q ss_pred ecCCCchhh-----------H---HhhcccC----CCCCCCHHHH----HHH---------------HHHHHHHHHHHHh
Q 002149 690 YMPQGALSK-----------H---IFHWKSL----NLEPLSWKRR----LNI---------------ALDVARGMEYLHS 732 (959)
Q Consensus 690 ~~~~gsL~~-----------~---l~~~~~~----~~~~l~~~~~----~~i---------------~~~ia~gL~yLH~ 732 (959)
|++|..+.. . +|..... ....+++... ..+ ...+.+.++.+..
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 998754321 1 1211100 0112222211 001 1111122333332
Q ss_pred c----CCCCeEecCCCCCCEEECCCCcEEEeecccccc
Q 002149 733 L----AHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKL 766 (959)
Q Consensus 733 ~----~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~ 766 (959)
. ....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1 235689999999999999 4 899999987653
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.42 E-value=0.0087 Score=65.77 Aligned_cols=142 Identities=15% Similarity=0.168 Sum_probs=82.8
Q ss_pred CcccccCceEEEEEEEc--------CCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC-CCCceeEEEEEEeCceEEEE
Q 002149 617 NELGRGGFGVVYKGELD--------DGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR-HRHLVSLLGYSVAGYERLLV 687 (959)
Q Consensus 617 ~~lG~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 687 (959)
+.+..|-...+|+.... +++.+.+|+.... ......+.+|.++++.+. +.-..++++++.+ .+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence 45777888889999764 2478899975321 122445668999999885 3333566666543 289
Q ss_pred EEecCCCchhhH-----------------HhhcccCCCCCCC--HHHHHHHHHHHHH-------------------HHHH
Q 002149 688 YEYMPQGALSKH-----------------IFHWKSLNLEPLS--WKRRLNIALDVAR-------------------GMEY 729 (959)
Q Consensus 688 ~e~~~~gsL~~~-----------------l~~~~~~~~~~l~--~~~~~~i~~~ia~-------------------gL~y 729 (959)
|||++|..+... +|.....-.+... |.++.++..++.. .++.
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 999987655311 1111110011222 4555555544422 2333
Q ss_pred HHh----c-CCCCeEecCCCCCCEEECCC----CcEEEeeccccc
Q 002149 730 LHS----L-AHQSFIHRDLKSSNILLGDD----FRAKVSDFGLVK 765 (959)
Q Consensus 730 LH~----~-~~~~ivH~Dik~~NiLl~~~----~~~ki~DfGla~ 765 (959)
|.+ . ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 332 1 12468999999999999876 789999998764
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.35 E-value=0.0065 Score=68.34 Aligned_cols=73 Identities=18% Similarity=0.261 Sum_probs=49.2
Q ss_pred cCcccccCceEEEEEEEcC--------CcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCc-eeEEEEEEeCceEEE
Q 002149 616 ENELGRGGFGVVYKGELDD--------GTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHL-VSLLGYSVAGYERLL 686 (959)
Q Consensus 616 ~~~lG~G~fg~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~l 686 (959)
.+.|+.|-...+|++...+ ++.+.+|+.... .. ...+.+|..+++.+...++ .++++.+.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 4568888889999998753 478899987431 11 1345579999998853334 566665432 38
Q ss_pred EEEecCCCch
Q 002149 687 VYEYMPQGAL 696 (959)
Q Consensus 687 v~e~~~~gsL 696 (959)
||||++|.++
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999976444
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.00 E-value=0.0082 Score=66.16 Aligned_cols=74 Identities=14% Similarity=0.106 Sum_probs=44.5
Q ss_pred cCcccccCceEEEEEEEcC---------CcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCC-ceeEEEEEEeCceEE
Q 002149 616 ENELGRGGFGVVYKGELDD---------GTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRH-LVSLLGYSVAGYERL 685 (959)
Q Consensus 616 ~~~lG~G~fg~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~ 685 (959)
.+.++.|..-.+|+....+ ++.+++|+.... .....+...|.++++.+...+ +.++++.. . -+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~ 110 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKH---VDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GG 110 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTT---GGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCC---ccceecHHHHHHHHHHHHhcCCCCceEEec--C--Cc
Confidence 3467788888999997654 267888876542 111112357888888885334 44666543 2 36
Q ss_pred EEEEecCCCch
Q 002149 686 LVYEYMPQGAL 696 (959)
Q Consensus 686 lv~e~~~~gsL 696 (959)
+||||++|..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987543
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.98 E-value=0.03 Score=60.79 Aligned_cols=67 Identities=4% Similarity=0.066 Sum_probs=43.6
Q ss_pred ccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcC---CCCceeEEEE------EEeCceEEEEEEec
Q 002149 621 RGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR---HRHLVSLLGY------SVAGYERLLVYEYM 691 (959)
Q Consensus 621 ~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~------~~~~~~~~lv~e~~ 691 (959)
.|....||+....+| .+++|+...... ..|+..++.|. -|.+++++.. .......++||+|+
T Consensus 33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~~--------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i 103 (339)
T 3i1a_A 33 ADTNAFAYQADSESK-SYFIKLKYGYHD--------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFI 103 (339)
T ss_dssp SCSSCEEEEEECSSC-EEEEEEEECSSC--------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECC
T ss_pred CccccceEEEEeCCC-CEEEEEecCccc--------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEecc
Confidence 333679999987767 899998765421 35666666663 1224454432 23456779999999
Q ss_pred CCCch
Q 002149 692 PQGAL 696 (959)
Q Consensus 692 ~~gsL 696 (959)
+|..+
T Consensus 104 ~G~~~ 108 (339)
T 3i1a_A 104 HAPNG 108 (339)
T ss_dssp CCCBT
T ss_pred CCCcC
Confidence 88765
No 443
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.86 E-value=0.03 Score=63.26 Aligned_cols=74 Identities=11% Similarity=0.053 Sum_probs=47.4
Q ss_pred cCcccccCceEEEEEEEcC-CcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCc-eeEEEEEEeCceEEEEEEecCC
Q 002149 616 ENELGRGGFGVVYKGELDD-GTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHL-VSLLGYSVAGYERLLVYEYMPQ 693 (959)
Q Consensus 616 ~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~ 693 (959)
.+.|+.|-...+|+....+ ++.+++|+..... .. .-+..+|..+++.+...++ .++++++. + .+||||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C--CS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 3567888889999998764 4788888764321 11 1112579999999965555 46776652 2 359999987
Q ss_pred Cch
Q 002149 694 GAL 696 (959)
Q Consensus 694 gsL 696 (959)
..+
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 554
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.38 E-value=0.075 Score=52.34 Aligned_cols=102 Identities=13% Similarity=0.119 Sum_probs=65.3
Q ss_pred CchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCcEEEeeccccccCCCCCcc
Q 002149 694 GALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDSERS 773 (959)
Q Consensus 694 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~~~~~~~~~ 773 (959)
-+|.+.|.... .++++++++.++.|.+.+|.-+-... .+ ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~----~PlsEEqaWALc~Qc~~~L~~~~~~~-~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 33 LSLEEILRLYN----QPINEEQAWAVCYQCCGSLRAAARRR-QP-RHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CC-CCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred ccHHHHHHHcC----CCcCHHHHHHHHHHHHHHHHhhhhcc-cC-CceecCCcceEEecCCceeccc-cccc--------
Confidence 36888886533 78999999999999999987762211 11 1233446889999999888753 1110
Q ss_pred eeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCC
Q 002149 774 VVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLM 816 (959)
Q Consensus 774 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~ 816 (959)
.....+.|||... ...+.+.=|||+|+++|.-+--..
T Consensus 98 -----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL 134 (229)
T 2yle_A 98 -----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL 134 (229)
T ss_dssp --------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred -----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence 1123466888653 345678899999999999886433
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.14 E-value=0.04 Score=60.77 Aligned_cols=145 Identities=18% Similarity=0.197 Sum_probs=81.6
Q ss_pred CcccccCceEEEEEEEcC--------CcEEEEEEcccccc------------cHH----HHHHHHHHHHHHHhcC-CCCc
Q 002149 617 NELGRGGFGVVYKGELDD--------GTKIAVKRMEAGVI------------SKK----AVDEFHSEIAVLSKVR-HRHL 671 (959)
Q Consensus 617 ~~lG~G~fg~V~~~~~~~--------~~~vavK~~~~~~~------------~~~----~~~~~~~E~~~l~~l~-h~ni 671 (959)
+.|..|-...+|++...+ ++.|.+++.-.... ..+ ..+....|..+++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667778999987653 36788887543210 000 0112335888988885 4445
Q ss_pred eeEEEEEEeCceEEEEEEecCCCchhhH-----------------HhhcccCCCCCCC--HHHHHHHHHHHH--------
Q 002149 672 VSLLGYSVAGYERLLVYEYMPQGALSKH-----------------IFHWKSLNLEPLS--WKRRLNIALDVA-------- 724 (959)
Q Consensus 672 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-----------------l~~~~~~~~~~l~--~~~~~~i~~~ia-------- 724 (959)
.++++++..+ +|+||+++-+|... +|.....-.+... |..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5677765432 89999986554211 1111100011222 334444443321
Q ss_pred --------------HHHHH----HHhc-CCCCeEecCCCCCCEEECCC------CcEEEeeccccc
Q 002149 725 --------------RGMEY----LHSL-AHQSFIHRDLKSSNILLGDD------FRAKVSDFGLVK 765 (959)
Q Consensus 725 --------------~gL~y----LH~~-~~~~ivH~Dik~~NiLl~~~------~~~ki~DfGla~ 765 (959)
.-+.. |... ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11222 2221 22468899999999999876 789999998664
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.39 E-value=0.088 Score=58.60 Aligned_cols=142 Identities=13% Similarity=0.156 Sum_probs=84.2
Q ss_pred cCcccccCceEEEEEEEcC--------CcEEEEEEcccccccHHHHHHHHHHHHHHHhcC-CCCceeEEEEEEeCceEEE
Q 002149 616 ENELGRGGFGVVYKGELDD--------GTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVR-HRHLVSLLGYSVAGYERLL 686 (959)
Q Consensus 616 ~~~lG~G~fg~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 686 (959)
.+.+..|-...+|+....+ ++.+++++.... . ...-+..+|..+++.+. +.-..++++.+ . -++
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~--t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKH--V-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCC--C--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCC--c-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCE
Confidence 3567778888999998753 578899886432 1 11122357888888885 33344566533 2 278
Q ss_pred EEEecCCCchhh-----------------HHhhccc-----C---CCCCCCHHHHHHHHHHH------------------
Q 002149 687 VYEYMPQGALSK-----------------HIFHWKS-----L---NLEPLSWKRRLNIALDV------------------ 723 (959)
Q Consensus 687 v~e~~~~gsL~~-----------------~l~~~~~-----~---~~~~l~~~~~~~i~~~i------------------ 723 (959)
||||++|..+.. .+|.... . ...+.-|.++.++..++
T Consensus 148 I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 227 (424)
T 3mes_A 148 IEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSK 227 (424)
T ss_dssp EEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHH
T ss_pred EEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHH
Confidence 999998866421 0111111 0 11222244444443322
Q ss_pred -HHHHHHHHh---------------------cCCCCeEecCCCCCCEEECCCCcEEEeeccccc
Q 002149 724 -ARGMEYLHS---------------------LAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 724 -a~gL~yLH~---------------------~~~~~ivH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
...+.+|.+ .....++|+|+.+.||+ +.++.+.++||..|.
T Consensus 228 l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 228 ILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp HHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence 223334332 11245889999999999 778899999998764
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=87.21 E-value=0.4 Score=33.58 Aligned_cols=10 Identities=20% Similarity=0.321 Sum_probs=3.8
Q ss_pred HHHhhhhhhc
Q 002149 527 PISICYYRKR 536 (959)
Q Consensus 527 ~~~~~~~r~r 536 (959)
.++++++|||
T Consensus 29 ~~~~~~RRRr 38 (44)
T 2l2t_A 29 TFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHhhhhh
Confidence 3333333333
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=85.65 E-value=0.53 Score=32.93 Aligned_cols=13 Identities=15% Similarity=0.350 Sum_probs=5.2
Q ss_pred HHHHHHhhhhhhc
Q 002149 524 VAIPISICYYRKR 536 (959)
Q Consensus 524 ~~~~~~~~~~r~r 536 (959)
+++.++++++|||
T Consensus 27 ~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 27 LGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHhheehhh
Confidence 3333444444443
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.43 E-value=0.11 Score=58.64 Aligned_cols=63 Identities=6% Similarity=0.091 Sum_probs=18.4
Q ss_pred ccCcccccCceEEEEEEEcC-CcEEEE------EEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEEEEe
Q 002149 615 SENELGRGGFGVVYKGELDD-GTKIAV------KRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGYSVA 680 (959)
Q Consensus 615 ~~~~lG~G~fg~V~~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 680 (959)
..+.+| ||.||+|.+.. ..+||| |..+....+.+....+.+|..+++.++|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 345676 99999998763 367888 7766544455556678899999999999999999887653
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=83.93 E-value=3.2 Score=45.71 Aligned_cols=28 Identities=32% Similarity=0.529 Sum_probs=23.9
Q ss_pred eEecCCCCCCEEE------CCCCcEEEeeccccc
Q 002149 738 FIHRDLKSSNILL------GDDFRAKVSDFGLVK 765 (959)
Q Consensus 738 ivH~Dik~~NiLl------~~~~~~ki~DfGla~ 765 (959)
++|+|+.+.||++ +++..++++||-.|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5699999999999 456779999998765
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.76 E-value=4.3 Score=39.99 Aligned_cols=114 Identities=11% Similarity=0.093 Sum_probs=77.3
Q ss_pred CCCCceeEEEEEEeCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEecCCCC
Q 002149 667 RHRHLVSLLGYSVAGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGME-YLHSLAHQSFIHRDLKS 745 (959)
Q Consensus 667 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivH~Dik~ 745 (959)
.||++ -...-.+.+...+.|+.-+++.=...+ +..+...+++++.+|+.-.+ ++++ -+|-=+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i--------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI--------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH--------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH--------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 58888 444556777777777776444333333 45678899999999988777 5654 57888999
Q ss_pred CCEEECCCCcEEEeeccccccCCCCCcceeeccccccccccccccccCCCCccchHH-HHHHHHHHHHhCCCCCC
Q 002149 746 SNILLGDDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVF-SFGVVLMELLTGLMALD 819 (959)
Q Consensus 746 ~NiLl~~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvw-SlG~ll~elltg~~p~~ 819 (959)
+||+++.++.++|.-.|+-.. ++|.-+ ...|.| .+=+++..++.++..|+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~------------------lpP~e~------~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKES------------------LPPDEW------DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETTT------------------BSSCSC------CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCccc------------------CCCCCC------CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999987775332 222211 112332 56677888888777654
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=73.74 E-value=4.7 Score=39.60 Aligned_cols=116 Identities=9% Similarity=0.087 Sum_probs=78.4
Q ss_pred CCCCceeEEEEEEeCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 002149 667 RHRHLVSLLGYSVAGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKSS 746 (959)
Q Consensus 667 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dik~~ 746 (959)
.||+++.. .+-.+.+...+.|+.-+.+.=...+ +..+...+++++.+|+.-.+++++ =+|-=+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i--------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI--------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG--------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHH--------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 58888876 5666667666666654322211222 557889999999999998876654 478889999
Q ss_pred CEEECCCCcEEEeeccccccCCCCCcceeeccccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 002149 747 NILLGDDFRAKVSDFGLVKLAPDSERSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALD 819 (959)
Q Consensus 747 NiLl~~~~~~ki~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~ll~elltg~~p~~ 819 (959)
|++++.++.+++.-.|+-... +|. ..+...=.-.+=+++..+++++..|+
T Consensus 109 NL~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999877753322 111 11111223356688888999887764
No 453
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=66.71 E-value=3.4 Score=28.54 Aligned_cols=13 Identities=38% Similarity=0.639 Sum_probs=5.7
Q ss_pred ehhHHHHHHHHHH
Q 002149 512 IAPVASVGVILLV 524 (959)
Q Consensus 512 i~~~~~~~~~~l~ 524 (959)
+++.+++++++++
T Consensus 15 I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 15 VIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 3444444444444
No 454
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=56.23 E-value=10 Score=28.76 Aligned_cols=21 Identities=19% Similarity=0.339 Sum_probs=12.8
Q ss_pred ehhHHHHHHHHHHHHHHHhhh
Q 002149 512 IAPVASVGVILLVAIPISICY 532 (959)
Q Consensus 512 i~~~~~~~~~~l~~~~~~~~~ 532 (959)
|++++++++++++.+.+++|.
T Consensus 12 ivlGg~~~lll~~glcI~ccv 32 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSV 32 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHhh
Confidence 455666666666666666544
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=44.45 E-value=22 Score=30.09 Aligned_cols=39 Identities=21% Similarity=0.339 Sum_probs=27.0
Q ss_pred CccCCCCccEEecCCCCCCCCChhhhcCCCCCcEEEccCc
Q 002149 121 SFSGLSNLKYAYLDGNNFDTIPADFFDGLENLQVLALDSN 160 (959)
Q Consensus 121 ~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 160 (959)
.|.++++|+.+.|-.+ ++.|...+|.++.+|+.+.+...
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 4677777777777653 66777777777777777777653
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.34 E-value=91 Score=26.16 Aligned_cols=26 Identities=15% Similarity=0.351 Sum_probs=21.9
Q ss_pred CCCCCCCChhhhcCCCCCcEEEccCc
Q 002149 135 GNNFDTIPADFFDGLENLQVLALDSN 160 (959)
Q Consensus 135 ~N~l~~i~~~~~~~l~~L~~L~Ls~N 160 (959)
+..++.|...+|.++.+|+.+.|-.+
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~ 30 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN 30 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc
Confidence 45678899999999999999988765
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=31.26 E-value=1.1e+02 Score=32.11 Aligned_cols=139 Identities=14% Similarity=0.121 Sum_probs=71.7
Q ss_pred ccCcccccCceEEEEEEEcCCcEEEEEEcccccccHHHHHHHHHHHHHHHhcCCCCceeEEEE--------------EE-
Q 002149 615 SENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISKKAVDEFHSEIAVLSKVRHRHLVSLLGY--------------SV- 679 (959)
Q Consensus 615 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~--------------~~- 679 (959)
.++..-.|..| ||.+.. ++..|.||-. +....+.+..++...-.+.-|+..-+.-. ..
T Consensus 73 ~I~~s~~Gstg-vff~~t-d~~~~VVK~s-----~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~ 145 (342)
T 1cja_A 73 GIERSEKGTEG-LFFVET-ESGVFIVKRS-----TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKS 145 (342)
T ss_dssp EEEECCSTTSC-EEEEEE-SSCEEEEECC-----TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSS
T ss_pred EEEeccCCCCC-eEEEEe-CCCEEEEeCc-----HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhh
Confidence 34445556554 555544 4778899943 22344555566666666666653222110 00
Q ss_pred -------eCceEEEEEEecCCCchhhHHhhcccCCCCCCCHHHHHHHHHHH--HHHHHHHHh-cCCCCeEe-cCCCCCCE
Q 002149 680 -------AGYERLLVYEYMPQGALSKHIFHWKSLNLEPLSWKRRLNIALDV--ARGMEYLHS-LAHQSFIH-RDLKSSNI 748 (959)
Q Consensus 680 -------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i--a~gL~yLH~-~~~~~ivH-~Dik~~Ni 748 (959)
.....+++|||.+|..|.+.-+.. ....+.. +.+.++ +-++.++.. ..+-+.+. .--.++||
T Consensus 146 ~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~---~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NI 218 (342)
T 1cja_A 146 FRVITTLANQANILLMELVRGITLNKLTTTS---APEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNI 218 (342)
T ss_dssp SCHHHHHTTCSEEEEEECCCEEESTTCCSSS---HHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGE
T ss_pred hHHHHHhhcccceehhhhcCCCccccchhhh---hhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhhe
Confidence 011456999999876664421100 0011222 233333 234445443 22223222 12578999
Q ss_pred EECCCC-cEEEeeccccccC
Q 002149 749 LLGDDF-RAKVSDFGLVKLA 767 (959)
Q Consensus 749 Ll~~~~-~~ki~DfGla~~~ 767 (959)
|++.+. .+.++|-+++...
T Consensus 219 L~~~~n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 219 MLSERGATVVPIDSKIIPLD 238 (342)
T ss_dssp EEESBTTCEEECSCCCCCCC
T ss_pred EEeCCCCeEEEEcCCccccC
Confidence 997654 4889999988643
No 458
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=27.51 E-value=51 Score=23.08 Aligned_cols=21 Identities=14% Similarity=-0.009 Sum_probs=12.5
Q ss_pred HHHHHHHHHhhhhhhcccccc
Q 002149 521 ILLVAIPISICYYRKRKEASQ 541 (959)
Q Consensus 521 ~~l~~~~~~~~~~r~rk~~~~ 541 (959)
+++++++....++--|+++.+
T Consensus 21 v~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 21 LLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHhhhhHhh
Confidence 334444456777888776554
No 459
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=26.38 E-value=65 Score=22.54 Aligned_cols=26 Identities=12% Similarity=0.158 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccc
Q 002149 516 ASVGVILLVAIPISICYYRKRKEASQ 541 (959)
Q Consensus 516 ~~~~~~~l~~~~~~~~~~r~rk~~~~ 541 (959)
.+++.+++++++....++-.|+++.+
T Consensus 15 gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 15 GVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 33444555566676777777776654
No 460
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=21.46 E-value=7.2e+02 Score=28.33 Aligned_cols=85 Identities=12% Similarity=0.094 Sum_probs=51.0
Q ss_pred eEEEEEEeCceEEEEEEecCCCchhhHH----------hhcccCCCC--CCCHHHHHHHHHHHHH--HHHHHHhcCCCCe
Q 002149 673 SLLGYSVAGYERLLVYEYMPQGALSKHI----------FHWKSLNLE--PLSWKRRLNIALDVAR--GMEYLHSLAHQSF 738 (959)
Q Consensus 673 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l----------~~~~~~~~~--~l~~~~~~~i~~~ia~--gL~yLH~~~~~~i 738 (959)
+.+.+...+.... +.|++++.++.+.+ ......... .+.+..+..++.++|- .+.|+=. |
T Consensus 403 ~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG-----i 476 (614)
T 3ls8_A 403 TPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG-----V 476 (614)
T ss_dssp CCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----C
T ss_pred eccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----c
Confidence 3444444443333 45777765555444 222111111 1345666677766553 4666633 3
Q ss_pred EecCCCCCCEEECCCCcEEEeeccccc
Q 002149 739 IHRDLKSSNILLGDDFRAKVSDFGLVK 765 (959)
Q Consensus 739 vH~Dik~~NiLl~~~~~~ki~DfGla~ 765 (959)
+|=.++|||++.+|++.=+|||.+.
T Consensus 477 --gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 --GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --cCCCCcceeEcCCCCEeeeehHHhh
Confidence 6778999999999999999999874
No 461
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=21.44 E-value=26 Score=25.64 Aligned_cols=7 Identities=43% Similarity=0.710 Sum_probs=2.6
Q ss_pred HHHHHHH
Q 002149 516 ASVGVIL 522 (959)
Q Consensus 516 ~~~~~~~ 522 (959)
++.++++
T Consensus 16 vl~GLLL 22 (54)
T 2l8s_A 16 AFAGLLL 22 (54)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
Done!