Your job contains 1 sequence.
>002152
MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK
SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML
DLRSRSEDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFY
AILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVE
DVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVR
MICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS
MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCD
MLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDC
TGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHK
DNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNT
QQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMG
KSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDY
KNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAA
MEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNR
QGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIR
QEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002152
(959 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005536 - symbol:PHYE "phytochrome E" species:... 3326 0. 1
TAIR|locus:2005515 - symbol:PHYB "AT2G18790" species:3702... 3053 3.6e-318 1
TAIR|locus:2005535 - symbol:PHYD "phytochrome D" species:... 2783 9.1e-290 1
TAIR|locus:2012300 - symbol:PHYA "phytochrome A" species:... 2429 3.0e-252 1
TAIR|locus:2165199 - symbol:PHYC "phytochrome C" species:... 2419 3.4e-251 1
UNIPROTKB|P06593 - symbol:PHYA3 "Phytochrome A type 3" sp... 2051 3.4e-212 1
UNIPROTKB|Q55168 - symbol:cph1 "Phytochrome-like protein ... 648 3.8e-63 1
UNIPROTKB|Q7CY45 - symbol:Atu1990 "Bacteriophytochrome pr... 508 5.6e-46 2
UNIPROTKB|Q48G81 - symbol:bphP "Bacteriophytochrome histi... 488 4.8e-44 2
UNIPROTKB|Q4K656 - symbol:bphP "Bacteriophytochrome histi... 474 8.3e-42 2
ASPGD|ASPL0000049609 - symbol:fphA species:162425 "Emeric... 360 3.4e-30 4
UNIPROTKB|G4MU11 - symbol:MGG_12377 "Phytochrome-1" speci... 341 1.8e-27 3
UNIPROTKB|Q55434 - symbol:cph2 "Phytochrome-like protein ... 206 2.2e-12 1
TIGR_CMR|DET_0127 - symbol:DET_0127 "sensory box sensor h... 129 0.00033 1
>TAIR|locus:2005536 [details] [associations]
symbol:PHYE "phytochrome E" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0016246 "RNA interference"
evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006355
GO:GO:0006351 EMBL:AL110123 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
EMBL:AL161548 UniGene:At.32943 UniGene:At.70995 GO:GO:0008020
GO:GO:0017006 HOGENOM:HOG000272703 EMBL:X76610 EMBL:AK221424
IPI:IPI00524548 PIR:S46313 RefSeq:NP_193547.4
ProteinModelPortal:P42498 SMR:P42498 IntAct:P42498 STRING:P42498
PaxDb:P42498 PRIDE:P42498 EnsemblPlants:AT4G18130.1 GeneID:827538
KEGG:ath:AT4G18130 TAIR:At4g18130 InParanoid:P42498 KO:K12123
OMA:LCLVNST Genevestigator:P42498 GermOnline:AT4G18130
Uniprot:P42498
Length = 1112
Score = 3326 (1175.9 bits), Expect = 0., P = 0.
Identities = 643/945 (68%), Positives = 766/945 (81%)
Query: 24 SSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAY 83
S+ + MKP + K+ Y+ DA L A+F QS+ +GKSFNYS+SVISPP VP+E ITAY
Sbjct: 8 SAASNMKPQPQ-KSNTAQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNHVPDEHITAY 66
Query: 84 LSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDL-----RSRSEDFE-LNGLIGI 137
LS IQRGGL+QPFGC++AVEEP+FRI+G S+N + L L S S +F+ + GLIGI
Sbjct: 67 LSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLLSLPSTSHSGEFDKVKGLIGI 126
Query: 138 DARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPS 197
DARTLFTP SGASL+KAA+ EISLLNP+LVHS R+ +KPFYAILHRID GIV+DLEP+
Sbjct: 127 DARTLFTPSSGASLSKAASFTEISLLNPVLVHS--RTTQKPFYAILHRIDAGIVMDLEPA 184
Query: 198 KSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFH 257
KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y FH
Sbjct: 185 KSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFH 244
Query: 258 DDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKE 317
+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+QS+E
Sbjct: 245 EDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEE 304
Query: 318 LKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYI 377
LK+PLCLVNSTLR+PHGCH QYM NMGS+ASL +A+++ KDS KLWGLVV HH SPRY+
Sbjct: 305 LKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSSKLWGLVVGHHCSPRYV 364
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QLAEK +RTQ LLCDMLLRD +IVTQSP I
Sbjct: 365 PFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSPGI 424
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD-CTGLSTDSLAEAGYPGA 496
MDLVKCDGAALYY G+CWLVGVTP ESQ+KD+ WL+ NHGD TGL+TDSL +AGYPGA
Sbjct: 425 MDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLVDAGYPGA 484
Query: 497 ALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFL 556
LG AVCG+A A +SKD+L WFRS+TA +KWGGAKHHP+ KD+ G+MHPRSSF AFL
Sbjct: 485 ISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDDAGRMHPRSSFTAFL 544
Query: 557 EVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSV 616
EV K+RS PWE+SEI+AIHSL+++MR+SF + GN + +EL+S
Sbjct: 545 EVAKSRSLPWEISEIDAIHSLRLIMRESFTSSRPV----LSGN-----GVARDANELTSF 595
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL DE+V EES+ A+
Sbjct: 596 VCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLADEIVQEESRAAL 655
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQH----SVVYILVNACTSRDYKNNVKGVCFVGQ 732
E+L+C+AL GEE+K+V LKLRKF Q H S V +LVN+CTSRDY N+ GVCFVGQ
Sbjct: 656 ESLLCKALQGEEEKSVMLKLRKFG-QNNHPDYSSDVCVLVNSCTSRDYTENIIGVCFVGQ 714
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
DIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDENACCSEWNAAMEK+TGW +HEV
Sbjct: 715 DITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHEV 774
Query: 793 IGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVALTA 851
IGKMLP E+FG FC++K QD LTKF+I LYQGI G E+ FFN++G+++E +LTA
Sbjct: 775 IGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFFNKEGKYIEASLTA 834
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++ T+ EGKVI CF F+QI+ + + L L++ + EL Y+RQE+KNPLNGIR
Sbjct: 835 NKSTNIEGKVIRCFFFLQII--NKESGLSCPELKESA--QSLNELTYVRQEIKNPLNGIR 890
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGR 956
F HKLLESS IS +QRQ+LETSDACE+QI TII+ DL+ IEEG+
Sbjct: 891 FAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEEGK 935
>TAIR|locus:2005515 [details] [associations]
symbol:PHYB "AT2G18790" species:3702 "Arabidopsis
thaliana" [GO:0004673 "protein histidine kinase activity"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009409 "response
to cold" evidence=IMP] [GO:0009649 "entrainment of circadian clock"
evidence=IMP] [GO:0009883 "red or far-red light photoreceptor
activity" evidence=IMP] [GO:0009638 "phototropism" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0009630
"gravitropism" evidence=RCA;IMP] [GO:0009687 "abscisic acid
metabolic process" evidence=IMP] [GO:0010029 "regulation of seed
germination" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0010617 "circadian regulation of calcium
ion oscillation" evidence=IMP] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IMP] [GO:0031347 "regulation of defense
response" evidence=IMP] [GO:0010148 "transpiration" evidence=IMP]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0015979 "photosynthesis" evidence=IMP] [GO:0006325 "chromatin
organization" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0010017 "red or far-red light signaling pathway"
evidence=RCA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0016604 "nuclear body"
evidence=IDA] [GO:0031516 "far-red light photoreceptor activity"
evidence=IDA] [GO:0031517 "red light photoreceptor activity"
evidence=IDA] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0010202 "response to low fluence red light stimulus"
evidence=IMP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 GO:GO:0006355 GO:GO:0016607 GO:GO:0009649
GO:GO:0009409 GO:GO:0006351 GO:GO:0010148 GO:GO:0009630
GO:GO:0009687 GO:GO:0023014 GO:GO:0018298 TIGRFAMs:TIGR00229
GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874 PROSITE:PS50109
GO:GO:0010029 GO:GO:0000160 GO:GO:0015979 GO:GO:0006325
GO:GO:0010161 EMBL:AC005724 GO:GO:0009867 GO:GO:0010374
GO:GO:0031347 GO:GO:0010617 GO:GO:0009638 GO:GO:0008020
GO:GO:0009883 eggNOG:COG4251 GO:GO:0017006 HOGENOM:HOG000272703
ProtClustDB:CLSN2679275 EMBL:X17342 EMBL:L09262 EMBL:AY466496
IPI:IPI00521343 PIR:B33473 RefSeq:NP_179469.1 UniGene:At.96
ProteinModelPortal:P14713 SMR:P14713 DIP:DIP-31742N IntAct:P14713
MINT:MINT-192399 STRING:P14713 PaxDb:P14713 PRIDE:P14713
ProMEX:P14713 EnsemblPlants:AT2G18790.1 GeneID:816394
KEGG:ath:AT2G18790 TAIR:At2g18790 InParanoid:P14713 KO:K12121
OMA:AVAYITK PhylomeDB:P14713 Genevestigator:P14713
GermOnline:AT2G18790 GO:GO:0010202 Uniprot:P14713
Length = 1172
Score = 3053 (1079.8 bits), Expect = 3.6e-318, P = 3.6e-318
Identities = 595/975 (61%), Positives = 737/975 (75%)
Query: 2 GLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKS 61
G Q T S+ NT S + V+ + + ++G ++ QS+ K+
Sbjct: 34 GEQAQSSGTKSLRPRSNTESM-SKAIQQYTVDARLHAVFEQSGESGKSFDYSQSL---KT 89
Query: 62 FNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLD 121
Y SV PE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML
Sbjct: 90 TTYGSSV-------PEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLG 142
Query: 122 LRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEK 177
+ +S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS + K
Sbjct: 143 IMPQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTG--K 199
Query: 178 PFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDT 237
PFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDT
Sbjct: 200 PFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDT 259
Query: 238 VVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQN 297
VVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQN
Sbjct: 260 VVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQN 319
Query: 298 RVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS 357
RVRMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 320 RVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIING 379
Query: 358 KD-----------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQL 406
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q+
Sbjct: 380 NEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQM 439
Query: 407 AEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQL 466
+EK +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+
Sbjct: 440 SEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQI 499
Query: 467 KDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAK 526
KD+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAK
Sbjct: 500 KDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAK 559
Query: 527 EVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ 586
E+KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+
Sbjct: 560 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFK 619
Query: 587 EMEEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGW 643
E E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGW
Sbjct: 620 ESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGW 679
Query: 644 NAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQK 703
NAK+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F +
Sbjct: 680 NAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPEL 739
Query: 704 QHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIP 763
Q V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIP
Sbjct: 740 QGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIP 799
Query: 764 PIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQ 823
PIFA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+
Sbjct: 800 PIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHN 859
Query: 824 GITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQG 883
I GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q
Sbjct: 860 AIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQR 919
Query: 884 LEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTI 943
+D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I
Sbjct: 920 RQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRI 979
Query: 944 IDGMDLRCIEEGRCV 958
+ MDL IE+G V
Sbjct: 980 VGDMDLESIEDGSFV 994
>TAIR|locus:2005535 [details] [associations]
symbol:PHYD "phytochrome D" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009883 "red
or far-red light photoreceptor activity" evidence=IGI] [GO:0010017
"red or far-red light signaling pathway" evidence=IGI;RCA]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
GO:GO:0006355 GO:GO:0006351 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874
PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160 EMBL:Z97340
EMBL:AL161543 GO:GO:0008020 GO:GO:0009883 GO:GO:0017006
HOGENOM:HOG000272703 ProtClustDB:CLSN2679275 EMBL:X76609
IPI:IPI00538270 PIR:B71429 RefSeq:NP_193360.1 UniGene:At.33095
ProteinModelPortal:P42497 SMR:P42497 IntAct:P42497 STRING:P42497
PaxDb:P42497 PRIDE:P42497 EnsemblPlants:AT4G16250.1 GeneID:827319
KEGG:ath:AT4G16250 TAIR:At4g16250 InParanoid:P42497 KO:K12122
OMA:INDIVEW PhylomeDB:P42497 ArrayExpress:P42497
Genevestigator:P42497 GermOnline:AT4G16250 Uniprot:P42497
Length = 1164
Score = 2783 (984.7 bits), Expect = 9.1e-290, P = 9.1e-290
Identities = 527/837 (62%), Positives = 659/837 (78%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D R+LF S L +A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDL
Sbjct: 162 IGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDL 219
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP+++ DPALS+AGAVQSQKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y
Sbjct: 220 EPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVY 279
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+D+HGEVV+E +R+DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q
Sbjct: 280 KFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQ 339
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS------------KDSMK 362
L Q +CLV STLR+PHGCH QYMTNMGSIASL MAVIIN ++SM+
Sbjct: 340 DDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMR 399
Query: 363 LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDML 422
LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDML
Sbjct: 400 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDML 459
Query: 423 LRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTG 482
LRD+P IVTQ PSIMDLVKC+GAA Y G+ + +GVTPT+SQ+ DI WL+ NH D TG
Sbjct: 460 LRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDSTG 519
Query: 483 LSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDN 542
LSTDSL +AGYP AA LG AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+
Sbjct: 520 LSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDD 579
Query: 543 GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQ--GNT 600
G +M+PRSSF+ FLEVVK+R PWE +E++AIHSLQ+++RDSF+E E DSK G
Sbjct: 580 GQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKE-SEAMDSKAAAAGAV 638
Query: 601 QQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEA 658
Q +G M QG+ E+ +VA EMVRLIETAT PIF VD G INGWNAK+AELTGL +A
Sbjct: 639 QPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDA 698
Query: 659 MGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSR 718
MGKSL+ E++++E + V+ L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+
Sbjct: 699 MGKSLVRELIYKEYKETVDRLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSK 758
Query: 719 DYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
DY NN+ GVCFVGQD+T K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN
Sbjct: 759 DYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWN 818
Query: 779 AAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFF 838
AMEK+TGW R EVIGK+L RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF
Sbjct: 819 TAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFF 878
Query: 839 NRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAY 898
+R+G+F++ LT ++R +GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAY
Sbjct: 879 DRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAY 938
Query: 899 IRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
I Q +KNPL+G+RF + LLE ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 939 IFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
Score = 1950 (691.5 bits), Expect = 1.7e-201, P = 1.7e-201
Identities = 388/589 (65%), Positives = 458/589 (77%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WL+ NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+ FLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQ--GNTQQNGSKM 607
+R PWE +E++AIHSLQ+++RDSF+E E DSK G Q +G M
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKE-SEAMDSKAAAAGAVQPHGDDM 645
>TAIR|locus:2012300 [details] [associations]
symbol:PHYA "phytochrome A" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009638 "phototropism" evidence=IMP]
[GO:0009630 "gravitropism" evidence=RCA;IMP] [GO:0016604 "nuclear
body" evidence=IDA] [GO:0010161 "red light signaling pathway"
evidence=IMP] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA;IMP] [GO:0009640 "photomorphogenesis"
evidence=IMP] [GO:0031516 "far-red light photoreceptor activity"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010017 "red or far-red light signaling pathway" evidence=RCA]
[GO:0009883 "red or far-red light photoreceptor activity"
evidence=TAS] [GO:0010201 "response to continuous far red light
stimulus by the high-irradiance response system" evidence=IMP]
[GO:0010203 "response to very low fluence red light stimulus"
evidence=IMP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524
GO:GO:0005737 GO:GO:0016020 GO:GO:0006355 GO:GO:0017148
GO:GO:0046685 GO:GO:0016607 GO:GO:0006351 GO:GO:0009640
GO:GO:0009630 EMBL:AC003970 GO:GO:0023014 GO:GO:0018298
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
GO:GO:0016604 GO:GO:0010161 GO:GO:0010201 GO:GO:0009638
GO:GO:0008020 GO:GO:0017006 EMBL:X17341 EMBL:L21154 EMBL:AY039520
IPI:IPI00535033 IPI:IPI00891850 PIR:A33473 PIR:D86229
RefSeq:NP_001117256.1 RefSeq:NP_172428.1 UniGene:At.22828
ProteinModelPortal:P14712 SMR:P14712 IntAct:P14712
MINT:MINT-1174780 STRING:P14712 PaxDb:P14712 PRIDE:P14712
EnsemblPlants:AT1G09570.1 GeneID:837483 KEGG:ath:AT1G09570
TAIR:At1g09570 HOGENOM:HOG000272703 InParanoid:P14712 KO:K12120
OMA:RWGGAKH PhylomeDB:P14712 ProtClustDB:CLSN2679275
Genevestigator:P14712 GermOnline:AT1G09570 GO:GO:0031516
GO:GO:0010203 Uniprot:P14712
Length = 1122
Score = 2429 (860.1 bits), Expect = 3.0e-252, P = 3.0e-252
Identities = 476/910 (52%), Positives = 634/910 (69%)
Query: 71 PPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE--- 127
PP ++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S +
Sbjct: 60 PPRS--DKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSV 117
Query: 128 -DFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRI 186
+ + G IG D R+LFT PS ++L KA ++SLLNPILVH R+ KPFYAI+HR+
Sbjct: 118 GEHPVLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHC--RTSAKPFYAIIHRV 174
Query: 187 DVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLT 246
I+ID EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LT
Sbjct: 175 TGSIIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELT 234
Query: 247 GYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCH 306
GYDRVM Y FH+DDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+
Sbjct: 235 GYDRVMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCN 294
Query: 307 AIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------ 360
A V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 295 AKHARVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPD 354
Query: 361 --------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNIL 412
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNIL
Sbjct: 355 ATTQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNIL 414
Query: 413 RTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWW 472
RTQ LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA W
Sbjct: 415 RTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASW 474
Query: 473 LLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGG 532
L H D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGG
Sbjct: 475 LCEYHMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGG 534
Query: 533 AKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEN 592
AKH P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E +
Sbjct: 535 AKHDPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTD 594
Query: 593 -DSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELT 651
++KV ++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELT
Sbjct: 595 VNTKVI-YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELT 653
Query: 652 GLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
GL EA+GK + +V + S V+ ++ AL G E++NV+ +++ + + ++
Sbjct: 654 GLSVDEAIGKHFLT-LVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLV 712
Query: 712 VNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDEN 771
VNAC SRD NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE
Sbjct: 713 VNACASRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEF 772
Query: 772 ACCSEWNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQ 828
C+EWN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q
Sbjct: 773 GWCTEWNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQ 832
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
E F FF R G++VE L S++ D EG V G FCF+Q+ +LQ AL Q L +
Sbjct: 833 DPEKVSFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERT 892
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
++K LAYI+++++NPL+GI F K++E + + QR+ L+TS C++Q+ I+D D
Sbjct: 893 AVKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSD 952
Query: 949 LRCIEEGRCV 958
L I EG C+
Sbjct: 953 LESIIEG-CL 961
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 184/349 (52%), Positives = 242/349 (69%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PTQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE----DFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH R+ KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHC--RTSAKPFYAIIHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
+ID EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD 359
V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEED 347
>TAIR|locus:2165199 [details] [associations]
symbol:PHYC "phytochrome C" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0008020
"G-protein coupled photoreceptor activity" evidence=IEA]
[GO:0009584 "detection of visible light" evidence=IEA] [GO:0009585
"red, far-red light phototransduction" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0017006 "protein-tetrapyrrole linkage"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245 PROSITE:PS50046
PROSITE:PS50112 SMART:SM00065 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020 GO:GO:0006355
GO:GO:0006351 GO:GO:0023014 GO:GO:0018298 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
GO:GO:0008020 EMBL:AB005236 GO:GO:0017006 HOGENOM:HOG000272703
ProtClustDB:CLSN2679275 EMBL:X17343 EMBL:Z32538 IPI:IPI00516887
PIR:C33473 RefSeq:NP_198433.1 UniGene:At.97
ProteinModelPortal:P14714 SMR:P14714 IntAct:P14714 STRING:P14714
PaxDb:P14714 PRIDE:P14714 EnsemblPlants:AT5G35840.1 GeneID:833570
KEGG:ath:AT5G35840 TAIR:At5g35840 InParanoid:P14714 OMA:LYGDNLR
PhylomeDB:P14714 Genevestigator:P14714 GermOnline:AT5G35840
Uniprot:P14714
Length = 1111
Score = 2419 (856.6 bits), Expect = 3.4e-251, P = 3.4e-251
Identities = 478/932 (51%), Positives = 649/932 (69%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEESE---RLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSRSEDF--ELNGL-IGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L + + L IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALEKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H S S KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHCRSSS--KPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDSMK----------LWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS + LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
I+ KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S QE E + + V N ++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQE--EHSKTVVDVPLVDN--RVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKTLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF--GNF 805
+GDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F ++
Sbjct: 735 KGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 806 -CRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ E FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>UNIPROTKB|P06593 [details] [associations]
symbol:PHYA3 "Phytochrome A type 3" species:4498 "Avena
sativa" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003018 InterPro:IPR000014 InterPro:IPR001294
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR012129
InterPro:IPR013515 InterPro:IPR013516 InterPro:IPR013654
InterPro:IPR013767 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF00989 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245 PROSITE:PS50046
PROSITE:PS50112 SMART:SM00065 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0006351 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 GO:GO:0000160 GO:GO:0008020
EMBL:X03242 EMBL:M18822 PIR:A29631 ProteinModelPortal:P06593
IntAct:P06593 Gramene:P06593 GO:GO:0017006 Uniprot:P06593
Length = 1129
Score = 2051 (727.0 bits), Expect = 3.4e-212, P = 3.4e-212
Identities = 413/810 (50%), Positives = 550/810 (67%)
Query: 18 NTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVP- 76
++ P SS ++ + ++ + ++ DA L AE+E+S G SF+YS+ V + +G P
Sbjct: 3 SSRPASSSSSRNRQSSQAR-VLAQTTLDAELNAEYEES---GDSFDYSKLVEAQRDGPPV 58
Query: 77 ----EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----ED 128
E++ AYL IQ+G LIQ FGC+LA++E +F +I +SEN EML S + +D
Sbjct: 59 QQGRSEKVIAYLQHIQKGKLIQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDD 118
Query: 129 FELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDV 188
G IG + R+LF+ +L KA ++SLLNPILV + KPFYAI+HR
Sbjct: 119 PPRLG-IGTNVRSLFSDQGATALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATG 175
Query: 189 GIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGY 248
+V+D EP K + + AGA+QS KLA AIS++Q+LPGG + +LC+TVV++V LTGY
Sbjct: 176 CLVVDFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGY 235
Query: 249 DRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAI 308
DRVM Y FH+DDHGEV SEI + LEPYLG+H+PA DIPQAAR LF +N+VRMICDC A
Sbjct: 236 DRVMAYKFHEDDHGEVFSEITKPGLEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRAR 295
Query: 309 PVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------- 360
+ VI+++ L + L S LR+PH CHLQYM NM SIASLVMAV++N +
Sbjct: 296 SIKVIEAEALPFDISLCGSALRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQ 355
Query: 361 -------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILR 413
KLWGL+VCHH SPRY+PFPLRYACEFL Q F++ + E ++ QL EKNIL+
Sbjct: 356 PAQQQKKKKLWGLLVCHHESPRYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILK 415
Query: 414 TQVLLCDMLLRDA-PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWW 472
Q +L DML R+A P +IV+ +P+IMDLVKCDGAAL YGG+ W + PTESQ+ DIA+W
Sbjct: 416 MQTMLSDMLFREASPLTIVSGTPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFW 475
Query: 473 LLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGG 532
L + H D TGLSTDSL +AGYPGAA LG +CGMA A+I SKD LFWFRSHTA E++WGG
Sbjct: 476 LSDVHRDSTGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGG 535
Query: 533 AKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEN 592
AK+ P D+ +MHPR SFKAFLEVVK +S PW E++AIHSLQ+++R + + +
Sbjct: 536 AKNDPSDMDDSRRMHPRLSFKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPK 595
Query: 593 DSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTG 652
N Q K+ G+ EL +V EMVRL+ETAT PI VD +G +NGWN K AELTG
Sbjct: 596 REASLDN-QIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTG 654
Query: 653 LPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILV 712
L +A+G+ ++ +V + S V+ ++ AL G+E+K V +++ ++ V ++V
Sbjct: 655 LRVDDAIGRHILT-LVEDSSVPVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVV 713
Query: 713 NACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENA 772
NAC SRD ++V GVCFV QD+T K++MDKF R++GDY+AII + NPLIPPIF +DE
Sbjct: 714 NACASRDLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFG 773
Query: 773 CCSEWNAAMEKVTGWMRHEVIGKMLPREIF 802
CSEWNAAM K+TGW R EV+ KML E+F
Sbjct: 774 WCSEWNAAMTKLTGWNRDEVLDKMLLGEVF 803
Score = 1538 (546.5 bits), Expect = 7.7e-158, P = 7.7e-158
Identities = 291/602 (48%), Positives = 405/602 (67%)
Query: 362 KLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDM 421
KLWGL+VCHH SPRY+PFPLRYACEFL Q F++ + E ++ QL EKNIL+ Q +L DM
Sbjct: 364 KLWGLLVCHHESPRYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDM 423
Query: 422 LLRDA-PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDC 480
L R+A P +IV+ +P+IMDLVKCDGAAL YGG+ W + PTESQ+ DIA+WL + H D
Sbjct: 424 LFREASPLTIVSGTPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDS 483
Query: 481 TGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHK 540
TGLSTDSL +AGYPGAA LG +CGMA A+I SKD LFWFRSHTA E++WGGAK+ P
Sbjct: 484 TGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDM 543
Query: 541 DNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNT 600
D+ +MHPR SFKAFLEVVK +S PW E++AIHSLQ+++R + + + N
Sbjct: 544 DDSRRMHPRLSFKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDN- 602
Query: 601 QQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMG 660
Q K+ G+ EL +V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G
Sbjct: 603 QIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIG 662
Query: 661 KSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDY 720
+ ++ +V + S V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD
Sbjct: 663 RHILT-LVEDSSVPVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDL 721
Query: 721 KNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAA 780
++V GVCFV QD+T K++MDKF R++GDY+AII + NPLIPPIF +DE CSEWNAA
Sbjct: 722 HDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAA 781
Query: 781 MEKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGF 837
M K+TGW R EV+ KML E+F + C +K +D +L+ + G+ TE PFGF
Sbjct: 782 MTKLTGWNRDEVLDKMLLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGF 841
Query: 838 FNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELA 897
F+R G+++E L+A+R+ + G + G FCF+ + +LQ AL+ Q + ++K +
Sbjct: 842 FDRSGKYIECLLSANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFS 901
Query: 898 YIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCI-EEGR 956
Y+R + NPL+G+ + K L+++ ++E Q + + D C QI I+ +D I E+
Sbjct: 902 YMRHAINNPLSGMLYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITEKSS 961
Query: 957 CV 958
C+
Sbjct: 962 CL 963
>UNIPROTKB|Q55168 [details] [associations]
symbol:cph1 "Phytochrome-like protein cph1" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0004673 "protein
histidine kinase activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009585 "red, far-red light
phototransduction" evidence=IDA] [GO:0009639 "response to red or
far red light" evidence=IDA] [GO:0009883 "red or far-red light
photoreceptor activity" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IDA] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0046777 "protein
autophosphorylation" evidence=IDA] InterPro:IPR003018
InterPro:IPR000014 InterPro:IPR001294 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS00245 PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065
SMART:SM00091 SMART:SM00387 SMART:SM00388 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0046777
GO:GO:0023014 GO:GO:0018298 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
GO:GO:0004673 GO:GO:0000160 EMBL:BA000022 GenomeReviews:BA000022_GR
BRENDA:2.7.13.3 GO:GO:0008020 GO:GO:0009883 PIR:S74389
RefSeq:NP_442237.1 RefSeq:YP_005652297.1 PDB:2VEA PDB:3ZQ5
PDBsum:2VEA PDBsum:3ZQ5 ProteinModelPortal:Q55168 IntAct:Q55168
STRING:Q55168 GeneID:12253516 GeneID:952560 KEGG:syn:slr0473
KEGG:syy:SYNGTS_2344 PATRIC:23842112 eggNOG:COG4251
HOGENOM:HOG000030537 KO:K11354 OMA:PESDIPQ ProtClustDB:CLSK893476
EvolutionaryTrace:Q55168 Uniprot:Q55168
Length = 748
Score = 648 (233.2 bits), Expect = 3.8e-63, P = 3.8e-63
Identities = 176/519 (33%), Positives = 268/519 (51%)
Query: 87 IQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGLIGIDARTLFTPP 146
I LIQP G ++ ++EP I S NC +L RS ED L+G +F
Sbjct: 20 IHTAHLIQPHGLVVVLQEPDLTISQISANCTGILG-RS-PED-----LLGRTLGEVFDSF 72
Query: 147 SGASLAKAAASREISLLNPILVHSNSRSIEKPFY-AILHRIDVGIVI-DLEPSKSGDPAL 204
+ + +IS LNP + + + + + HR G+++ +LEP+ + D L
Sbjct: 73 QIDPIQSRLTAGQISSLNPSKLWARVMGDDFVIFDGVFHRNSDGLLVCELEPAYTSDN-L 131
Query: 205 SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEV 264
G +A +A++RL+ ++ D +VE+V+++TG+DRVMLY F +++HG+V
Sbjct: 132 PFLGFYH---MANAALNRLRQQ--ANLRDFYDVIVEEVRRMTGFDRVMLYRFDENNHGDV 186
Query: 265 VSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCH--AIPVMVIQSKELKQPL 322
++E +R D+EPYLG+H+P +DIPQ AR LF N +R+I D + A+P+ + + +
Sbjct: 187 IAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPSTNRAV 246
Query: 323 CLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLR 382
L S LRS + CHL Y+ NMG ASL +++I KD LWGL+ CHH +P+ IPF LR
Sbjct: 247 DLTESILRSAYHCHLTYLKNMGVGASLTISLI---KDG-HLWGLIACHHQTPKVIPFELR 302
Query: 383 YACEFLVQA----FSLQLYME-LQVAMQLAEKNILRTQVLLCDMLLRDAPF-SIVTQSPS 436
ACEF + S Q E +QLAE + +L D + A F +T P
Sbjct: 303 KACEFFGRVVFSNISAQEDTETFDYRVQLAEH-----EAVLLDKMTTAADFVEGLTNHPD 357
Query: 437 -IMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
++ L GAA+ +G + LVG TP E ++ + WL N T SL++ YP
Sbjct: 358 RLLGLTGSQGAAICFGEKLILVGETPDEKAVQYLLQWLENREVQDV-FFTSSLSQI-YPD 415
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGK--MHPRSSF 552
A G+ I +FL WFR + V WGG +H E GK +HPR SF
Sbjct: 416 AVNFKSVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQEDGKIELHPRQSF 475
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEE 591
+ E+V+ +S PW+ EI + +L+ + + EE
Sbjct: 476 DLWKEIVRLQSLPWQSVEIQSALALKKAIVNLILRQAEE 514
>UNIPROTKB|Q7CY45 [details] [associations]
symbol:Atu1990 "Bacteriophytochrome protein" species:176299
"Agrobacterium fabrum str. C58" [GO:0004673 "protein histidine
kinase activity" evidence=TAS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009883 "red or far-red light
photoreceptor activity" evidence=TAS] [GO:0019922
"protein-chromophore linkage via peptidyl-cysteine" evidence=IDA]
InterPro:IPR003018 InterPro:IPR001294 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 SMART:SM00065 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0023014 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0004673
GO:GO:0000160 EMBL:AE007869 GenomeReviews:AE007869_GR GO:GO:0008020
GO:GO:0009883 KO:K00936 eggNOG:COG4251 HOGENOM:HOG000030537
RefSeq:NP_354963.2 ProteinModelPortal:Q7CY45 STRING:Q7CY45
GeneID:1134028 KEGG:atu:Atu1990 PATRIC:20813753 OMA:PVHLQYM
GO:GO:0019922 Uniprot:Q7CY45
Length = 736
Score = 508 (183.9 bits), Expect = 5.6e-46, Sum P(2) = 5.6e-46
Identities = 139/429 (32%), Positives = 213/429 (49%)
Query: 176 EKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLC 235
EK HR +++++E + G+ A L G + S LA L + P + L
Sbjct: 87 EKKLDVSAHRSGTLVILEVEKAGVGESAEKLMGELTS--LA----KYLNSAPSLEDALF- 139
Query: 236 DTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFK 295
+ V ++G+DR ++Y+F D G VV+E L YLG+ FPA DIP AR L+
Sbjct: 140 -RTAQLVSSISGHDRTLIYDFGLDWSGHVVAEAGSGALPSYLGLRFPAGDIPPQARQLYT 198
Query: 296 QNRVRMI--CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAV 353
NR+RMI D +P+ + E L + S LRS HL+YM NMG+ AS+ +++
Sbjct: 199 INRLRMIPDVDYKPVPIRPEVNAETGAVLDMSFSQLRSVSPVHLEYMRNMGTAASMSVSI 258
Query: 354 IINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMEL--QVAMQLAEKNI 411
++N LWGL+ CHH +P + +R AC+F Q S+++ ME Q A + E
Sbjct: 259 VVNGA----LWGLIACHHATPHSVSLAVREACDFAAQLLSMRIAMEQSSQDASRRVELGH 314
Query: 412 LRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK---CDGAALYYGGRCWLVGVTPTESQLKD 468
++ ++L ++ DL+K DGAAL G LVG TP+ Q+++
Sbjct: 315 IQARLLKGMAAAEKWVDGLLGGEGEREDLLKQVGADGAALVLGDDYELVGNTPSREQVEE 374
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK--DFLFWFRSHTAK 526
+ WL +TD+LA YP AA G+ R++ +L WFR K
Sbjct: 375 LILWL-GEREIADVFATDNLA-GNYPTAAAYASVASGIIAMRVSELHGSWLIWFRPEVIK 432
Query: 527 EVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQ-----IVM 581
V+WGG H + G++HPR SF+ + E ++N SFPW E+ A L+ IV+
Sbjct: 433 TVRWGGDPHKTVQES--GRIHPRKSFEIWKEQLRNTSFPWSEPELAAARELRGAIIGIVL 490
Query: 582 RDSFQEMEE 590
R + +EM +
Sbjct: 491 RKT-EEMAD 498
Score = 40 (19.1 bits), Expect = 5.6e-46, Sum P(2) = 5.6e-46
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 91 GLIQPFGCMLAVEEPTFRIIGYSEN 115
G IQ G +L + F ++ S+N
Sbjct: 20 GAIQEHGALLVLSAREFSVVQASDN 44
>UNIPROTKB|Q48G81 [details] [associations]
symbol:bphP "Bacteriophytochrome histidine kinase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0009639 "response to red or far red light"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR003018 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013515 InterPro:IPR013654 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PRINTS:PR00344 PROSITE:PS50046 SMART:SM00065 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0009639 GO:GO:0005622 GO:GO:0018298
GO:GO:0000156 EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 eggNOG:COG4251
HOGENOM:HOG000030537 RefSeq:YP_275602.1 ProteinModelPortal:Q48G81
STRING:Q48G81 GeneID:3556653 KEGG:psp:PSPPH_3446 PATRIC:19976304
OMA:NWLRIIP ProtClustDB:CLSK412238 Uniprot:Q48G81
Length = 745
Score = 488 (176.8 bits), Expect = 4.8e-44, Sum P(2) = 4.8e-44
Identities = 159/558 (28%), Positives = 268/558 (48%)
Query: 87 IQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGLIGIDARTLFTPP 146
IQ G IQP G + +EEP I+ S N +L + + L G+D L
Sbjct: 21 IQFPGAIQPHGLLFTLEEPNLTILQVSANVQSVL---GHAPEHVLGK--GLD-HVLGA-- 72
Query: 147 SGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSL 206
A + ++A++ + S ++ + IE F A++HR +V++LE A+S
Sbjct: 73 GWAEVIRSASAHD-SFVDAQRLLMTVNGIE--FEALMHRNQGVLVLELEIQDKDAQAVSY 129
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
+ + +L A D+ L + V ++Q++TGYDRV++Y F ++ HG+V++
Sbjct: 130 TERTGNMG---RMLRQLHA--ASDLQTLYEVSVREIQRMTGYDRVLIYRFEEEGHGQVIA 184
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV-MVIQSK-ELKQPLCL 324
E +E + G+ FPA+DIP+ AR L+++N +R+I D PV +V Q + + +Q L L
Sbjct: 185 EASAPSMELFNGLFFPASDIPEQARELYRRNWLRIIPDADYTPVPLVPQLRPDTQQQLDL 244
Query: 325 VNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYA 384
STLRS H QYM NMG ++S+ +++I K LWGL+ C H +P Y+ LR A
Sbjct: 245 SFSTLRSVSPIHCQYMKNMGVLSSMSVSLIQGGK----LWGLISCGHRTPLYVSHELRSA 300
Query: 385 CEFLVQAFSLQLY-ME-LQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI-MDLV 441
C+ + Q SLQ+ ME L+++ Q K Q+ + F + Q P + MDLV
Sbjct: 301 CQAIGQVLSLQISAMEALEISRQREAKVRALEQLHQAMAESEENVFDGLAQQPQLLMDLV 360
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL--L 499
G A+ + G P S ++ + W++ G+ ++ L+ PG A +
Sbjct: 361 GATGVAIIEDRQTHCYGACPEVSDIRALHTWMIAG-GEPV-YASHHLSSVYAPGEAYQPV 418
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP---EHKDNGGKMHPRSSFKAFL 556
V M + + WFRS + V+W G + P E + G ++ PR+SF+ +
Sbjct: 419 ASGVLAMNLPKPVDNGVI-WFRSEVKESVQWSGDPNKPLNMESSEGGMRLRPRTSFEIWK 477
Query: 557 EVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSV 616
+ + W ++ A + L+ R + END Q +Q + + DEL +V
Sbjct: 478 VEMTGIAPKWSHGDVFAANDLR---RSAL-----ENDLASQVRKEQQAVRAR--DELVAV 527
Query: 617 ACEMVRLIETATAPIFGV 634
+R T + + G+
Sbjct: 528 VSHDLRNPMTVISMLCGM 545
Score = 47 (21.6 bits), Expect = 4.8e-44, Sum P(2) = 4.8e-44
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 885 EDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN---QRQY---LET-SDACE 937
E + A+ + +A + +++NP+ I + +++ S S+ R+ ++T A
Sbjct: 514 EQQAVRARDELVAVVSHDLRNPMTVISMLCGMMQKSFSSDGPHTSRRISTAIDTMQQAAS 573
Query: 938 RQIMTIIDGMDLRCIEEGR 956
R + + D +D IE GR
Sbjct: 574 RMNVLLEDLLDTSKIEAGR 592
>UNIPROTKB|Q4K656 [details] [associations]
symbol:bphP "Bacteriophytochrome histidine kinase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0009639
"response to red or far red light" evidence=ISS] [GO:0023014
"signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR003018 InterPro:IPR000014 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013515 InterPro:IPR013654 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PRINTS:PR00344 PROSITE:PS50046 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0009639 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0018298 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 eggNOG:COG4251
HOGENOM:HOG000030537 OMA:NWLRIIP ProtClustDB:CLSK412238
RefSeq:YP_262277.1 ProteinModelPortal:Q4K656 STRING:Q4K656
GeneID:3479601 KEGG:pfl:PFL_5200 PATRIC:19879863
BioCyc:PFLU220664:GIX8-5240-MONOMER Uniprot:Q4K656
Length = 746
Score = 474 (171.9 bits), Expect = 8.3e-42, Sum P(2) = 8.3e-42
Identities = 149/525 (28%), Positives = 245/525 (46%)
Query: 69 ISPPEGVPEEQITAYLSK--IQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS 126
++P + EQ+ A + I+ G IQP G +L + EP RI S N +L +
Sbjct: 1 MTPQDAQAFEQLLANCADEPIRSPGAIQPHGVLLTLSEPELRIQQISANVEALLGQPAAQ 60
Query: 127 EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRI 186
++G L G + + +S P+ + N E +LHR
Sbjct: 61 -------VLGQPLEQLLGDTDGQRIREVLQLPRLSDAPPLHLAVNGARFE----GLLHRH 109
Query: 187 DVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLT 246
++++LE L Q++ L + RLQ + L V ++Q +T
Sbjct: 110 QGVLMLELEIQLEHLQPQHLKE--QTENLG-RLLRRLQTAK--TLNELYAISVSEIQAMT 164
Query: 247 GYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI--CD 304
GYDRV++Y F ++ HG+V++E R +E + G+ FPA+DIPQ AR L++ N +R+I D
Sbjct: 165 GYDRVLIYRFEEEGHGQVIAEATRPTMEVFNGLFFPASDIPQQARELYRSNWLRIIPNAD 224
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLW 364
+P++ + +Q L L +TLRS H QYM NMG ++S M++ + D +LW
Sbjct: 225 YQPVPLLPALRPDTQQALDLSFATLRSVSPIHCQYMKNMGVLSS--MSISLLKGD--QLW 280
Query: 365 GLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLY-ME-LQVAMQLAEKNILRTQVLLCDML 422
GL+ C + P +P LR AC+ + Q SLQ+ ME L ++ Q EK T + D
Sbjct: 281 GLISCGNRQPLLVPHELRIACQTIGQVLSLQISAMEALDISRQREEKV---TALASLDQA 337
Query: 423 LRDAPFSI---VTQSPSIM-DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG 478
+RD P S+ + Q P ++ DL + G A+ + G P + +++ + WL G
Sbjct: 338 MRDTPDSVFDGLAQVPQLLLDLTQAGGVAIIEDKQLHCFGNCPPQDEIRALHRWLQGT-G 396
Query: 479 DCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK--DFLFWFRSHTAKEVKWGGAKHH 536
++ LA YP AA Q G+ + + + WFR + + W G
Sbjct: 397 QAV-FASHHLANV-YPPAASYQQVASGVLAMTLPKPVDNGVLWFRPEVKENINWSGNPQK 454
Query: 537 P---EHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQ 578
P E+ D G ++ PR+SF+ + + S W + A + L+
Sbjct: 455 PLDLENSDAGLRLRPRTSFEIWKVEMAGISTKWSHGDRFAANDLR 499
Score = 42 (19.8 bits), Expect = 8.3e-42, Sum P(2) = 8.3e-42
Identities = 21/90 (23%), Positives = 40/90 (44%)
Query: 875 LQPALEAQGL-EDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN---QRQYL 930
L+ L Q L E + A+ + +A + +++NP+ I + +++ + S+ R+
Sbjct: 503 LEHDLARQVLREQQAVRARDELVAVVSHDLRNPMTVISMLCGMMQKAFSSDGPHTSRRIS 562
Query: 931 ETSD----ACERQIMTIIDGMDLRCIEEGR 956
D A R + D +D IE GR
Sbjct: 563 SAIDTMQQAASRMNNLLEDLLDTSKIEAGR 592
>ASPGD|ASPL0000049609 [details] [associations]
symbol:fphA species:162425 "Emericella nidulans"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0004673 "protein
histidine kinase activity" evidence=IDA] [GO:0000909 "sporocarp
development involved in sexual reproduction" evidence=IMP]
[GO:0031517 "red light photoreceptor activity" evidence=IDA]
[GO:0010913 "regulation of sterigmatocystin biosynthetic process"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0071491
"cellular response to red light" evidence=IMP;IDA] [GO:1900198
"positive regulation of penicillin biosynthetic process"
evidence=IMP] [GO:0042318 "penicillin biosynthetic process"
evidence=IMP] [GO:1900376 "regulation of secondary metabolite
biosynthetic process" evidence=IMP] [GO:0000155 "phosphorelay
sensor kinase activity" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=IEA] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] InterPro:IPR003018 InterPro:IPR001294
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR009082 InterPro:IPR013515 InterPro:IPR013654
InterPro:IPR016132 Pfam:PF00072 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 PROSITE:PS50110 SMART:SM00065 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:BN001307
GO:GO:0005622 GO:GO:0023014 EMBL:AACD01000168 GO:GO:0018298
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 RefSeq:XP_682277.1
ProteinModelPortal:G5EB62 EnsemblFungi:CADANIAT00007846
GeneID:2868257 KEGG:ani:AN9008.2 HOGENOM:HOG000171704 OMA:KELTGFH
Uniprot:G5EB62
Length = 1280
Score = 360 (131.8 bits), Expect = 3.4e-30, Sum P(4) = 3.4e-30
Identities = 111/378 (29%), Positives = 189/378 (50%)
Query: 218 SAISRLQA-LPGGD-IGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI--RRSDL 273
S +S++Q L D + L DT V++LTG+ R+++Y F + +G+VVSE+ +
Sbjct: 380 SIVSQIQEQLARADNMEALLDTTSGIVKELTGFHRILVYQFDSEFNGKVVSELVDPTMSI 439
Query: 274 EPYLGIHFPANDIPQAARFLFKQNRVRMICDC-HAIPVMVIQSKE-LKQPLCLVNSTLRS 331
+ + G+HFPA DIP+ AR L++ N+VR++ D H +V ++ E L+ PL + ++ LR+
Sbjct: 440 DLFKGLHFPAADIPKQARDLYRINKVRLLYDRDHVTARLVCRALEDLETPLDMTHAYLRA 499
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPR--YIPFPLRYACEFLV 389
H++Y+ NM +S M++ INS + LWGL+ CH PR + FP+R C +
Sbjct: 500 MSPIHIKYLANMQIRSS--MSISINSMND--LWGLISCHSYGPRGMRVSFPIRKMCRLIG 555
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFS--IVTQSPSIMDLVKCDGAA 447
S + L A +L + ++ T + DA S IV S ++ LV D A
Sbjct: 556 DTVSRNIE-RLSYASRLQARKLINT-------VPTDANPSGYIVASSDDLLRLVDADYGA 607
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWL-LNNHGDCTGLS--TDSLAEAGYPGAALLGQAVC 504
L G ++ +P ++ + +L + + + + YP + +
Sbjct: 608 LCIRGEVKILAKSPQSQEMLALLEYLKVRKYNSVLTSNHIVKDFQDLNYPPGF---KDIS 664
Query: 505 GMATARITSK--DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
G+ +++ DF+ +FR EVKWGG + E K G + PR SF+ + E V +R
Sbjct: 665 GLLYVPLSTDGLDFIVFFRRGQLTEVKWGGNPN--EAKFTEGHLEPRKSFQTWRETVLDR 722
Query: 563 SFPWEVSEINAIHSLQIV 580
W SE++ L +V
Sbjct: 723 CRDWTESEVDTAAVLCLV 740
Score = 66 (28.3 bits), Expect = 3.4e-30, Sum P(4) = 3.4e-30
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 896 LAYIRQEVKNPLNGI-RFVHKLLESSSISENQRQYLETSDACERQIMTII-DGMDLRCIE 953
LA EV+ PLN I ++ LE + E R +L S + + ++ +I D +DL +E
Sbjct: 765 LANSAHEVRTPLNAIVNYLEIALEGALDGET-RDHLSKSYSASKSLIYVINDLLDLTNVE 823
Query: 954 EGR 956
+G+
Sbjct: 824 KGQ 826
Score = 50 (22.7 bits), Expect = 3.4e-30, Sum P(4) = 3.4e-30
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 91 GLIQPFGCMLAV-EEPTFRIIG--YSENCLEMLDLRSRSEDFELNGLIGI 137
G IQ FG ++AV EEP +++ SEN ++L S ++ F L L I
Sbjct: 204 GAIQSFGALVAVREEPGEQMVVRIVSENSQDILGY-SPNDLFSLPTLCDI 252
Score = 41 (19.5 bits), Expect = 3.4e-30, Sum P(4) = 3.4e-30
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 49 LAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
L E S S N S+S +SP G + I
Sbjct: 56 LVSLEPPATSEPSSNKSKSPLSPTSGARQFSI 87
>UNIPROTKB|G4MU11 [details] [associations]
symbol:MGG_12377 "Phytochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00072 Pfam:PF00360
Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 PROSITE:PS50110 PROSITE:PS50112 SMART:SM00065
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0023014 GO:GO:0018298 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0043581 EMBL:CM001232
GO:GO:0008020 RefSeq:XP_003715418.1 ProteinModelPortal:G4MU11
EnsemblFungi:MGG_12377T0 GeneID:5050971 KEGG:mgr:MGG_12377
Uniprot:G4MU11
Length = 1523
Score = 341 (125.1 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 111/408 (27%), Positives = 193/408 (47%)
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
AGA+Q + +S + Q ++ +V V +LTG+ RVM+Y F + +G VV+
Sbjct: 463 AGAMQIFDI-MSQVQE-QLATADNLEKFLKILVGIVSELTGFHRVMIYQFDSEFNGRVVT 520
Query: 267 EI----RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI--QSKELKQ 320
E+ + DL Y G+HFPA+DIP+ AR L+K N+VR++ D ++ +++L +
Sbjct: 521 ELVDTAQTRDL--YKGLHFPASDIPKQARDLYKINKVRLLYDRDQPTARLVCRSTEDLDK 578
Query: 321 PLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPR--YIP 378
PL L +S LR+ HL+Y+ NM +S M++ I + D +LWGL+ CH PR +
Sbjct: 579 PLDLTHSYLRAMSPIHLKYLNNMAVRSS--MSISIKAFD--ELWGLIACHSYGPRGMRVS 634
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FP+R C + S + L A +L + ++ T + D ++ IV S ++
Sbjct: 635 FPIRKMCRLVGDTASRNIE-RLSYASRLQARKLINT--VPTD---KNPSGYIVASSDDLL 688
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD---SLAEAGY-P 494
L D A+ G ++G + ++ + +L S D A+ Y P
Sbjct: 689 KLFDADFGAVSIRGETKILGKPESTQEILVLLEYLRMKKFTSVLTSQDLTVDFADLRYAP 748
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMH---PRSS 551
G ++ + + DF+ +FR ++VKW G + ++ G H PR S
Sbjct: 749 GFQMIAGVL--YVPLSVGGNDFIVFFRQGQVRQVKWAGNPYEKVVQE--GTQHYLEPRKS 804
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
FK + E V + W ++ L +V F E+ + ++ +Q +
Sbjct: 805 FKVWHETVVGKCRDWSEEQVETAAVLCLVY-GKFIEVWRQKEAALQSS 851
Score = 70 (29.7 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 896 LAYIRQEVKNPLNGI-RFVHKLLESSSISENQRQYLETSDACERQIMTII-DGMDLRCIE 953
LA EV+ PLN I ++ LE S + + R L S + + ++ +I D +DL E
Sbjct: 858 LANSAHEVRTPLNAIINYLEIALEGS-LDQETRDNLSKSHSASKSLIYVINDLLDLTKAE 916
Query: 954 EGR 956
EG+
Sbjct: 917 EGQ 919
Score = 43 (20.2 bits), Expect = 1.1e-24, Sum P(3) = 1.1e-24
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVNA--CTS 717
R L E+D + +KL + L+K VV VN C S
Sbjct: 1345 RVLCAEDDP-INMKLLRKRLEKAGHVVSHTVNGADCAS 1381
Score = 40 (19.1 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 87 IQRGGLIQPFGCMLAV--EEPTFRIIGY-SENCLEML 120
I G +Q FG ++A+ +E ++ Y SEN +L
Sbjct: 284 IHAPGAVQGFGALVALAEDENGCHLVRYASENTKHIL 320
>UNIPROTKB|Q55434 [details] [associations]
symbol:cph2 "Phytochrome-like protein cph2" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0009585 "red,
far-red light phototransduction" evidence=TAS] [GO:0009883 "red or
far-red light photoreceptor activity" evidence=TAS] [GO:0018298
"protein-chromophore linkage" evidence=TAS] InterPro:IPR003018
InterPro:IPR001054 InterPro:IPR001294 InterPro:IPR013515
InterPro:IPR016132 Pfam:PF00360 Pfam:PF01590 PRINTS:PR01033
PROSITE:PS00245 PROSITE:PS50046 SMART:SM00065 Pfam:PF00990
Pfam:PF00563 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
SUPFAM:SSF55073 GO:GO:0018298 GO:GO:0016849 GO:GO:0009190
InterPro:IPR000160 SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887
Gene3D:3.20.20.450 InterPro:IPR001633 SMART:SM00052
SUPFAM:SSF141868 PROSITE:PS50883 EMBL:BA000022
GenomeReviews:BA000022_GR GO:GO:0008020 GO:GO:0009883 PIR:S75801
RefSeq:NP_442466.1 RefSeq:YP_005652527.1 ProteinModelPortal:Q55434
DIP:DIP-48801N IntAct:Q55434 STRING:Q55434 GeneID:12253839
GeneID:952361 KEGG:syn:sll0821 KEGG:syy:SYNGTS_2574 PATRIC:23842638
eggNOG:COG2203 KO:K02488 OMA:AIHQGEL ProtClustDB:CLSK2393495
Uniprot:Q55434
Length = 1276
Score = 206 (77.6 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 64/220 (29%), Positives = 104/220 (47%)
Query: 238 VVEDVQKLTGYDRVMLYNFHDDDHGEVVSE-IRRSDLEPYLGIHFPANDIP-QAARFLFK 295
+VE+ + G DRV +Y F D GEV++E + R+ L LG+HFP DIP QA L
Sbjct: 31 IVEEARIFLGVDRVKIYKFASDGSGEVLAEAVNRAALPSLLGLHFPVEDIPPQAREELGN 90
Query: 296 QNRVRMICDCHAIPVMVIQSKELK---QPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMA 352
Q ++ + H +S EL P N + CH+QY+ MG ++SL +
Sbjct: 91 QRKMIAVDVAHRRK----KSHELSGRISPTEHSNGHYTTVDSCHIQYLLAMGVLSSLTVP 146
Query: 353 VIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNIL 412
V+ +D +LWG++ HH+ PR L + SL + + Q++ Q+ ++ +
Sbjct: 147 VM---QDQ-QLWGIMAVHHSKPRRFTEQEWETMALLSKEVSLAI-TQSQLSRQVHQQQVQ 201
Query: 413 RTQVLLCDMLLR---DAPFSIVTQSPSIMDLVKCDGAALY 449
V + + D P + ++ V+ DGA LY
Sbjct: 202 EALVQRLETTVAQYGDRPETWQYALETVGQAVEADGAVLY 241
>TIGR_CMR|DET_0127 [details] [associations]
symbol:DET_0127 "sensory box sensor histidine kinase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0004871
"signal transducer activity" evidence=ISS] [GO:0007165 "signal
transduction" evidence=ISS] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR013767
Pfam:PF00512 Pfam:PF00989 Pfam:PF02518 Pfam:PF13185 PRINTS:PR00344
PROSITE:PS50112 PROSITE:PS50113 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0023014 eggNOG:COG2202
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
KO:K02482 RefSeq:YP_180877.1 ProteinModelPortal:Q3ZA72
STRING:Q3ZA72 GeneID:3230515 KEGG:det:DET0127 PATRIC:21607343
HOGENOM:HOG000010164 OMA:HRINNIR ProtClustDB:CLSK741624
BioCyc:DETH243164:GJNF-127-MONOMER Uniprot:Q3ZA72
Length = 1061
Score = 129 (50.5 bits), Expect = 0.00033, P = 0.00033
Identities = 52/211 (24%), Positives = 89/211 (42%)
Query: 588 MEEENDSKVQGNTQQNGSKMQGV-DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
+ +EN V T + S+++ D L+ + ETA + I D +G IN N +
Sbjct: 543 LNQENSYMVY-TTFTDISRLKNARDALTRSENRYRSIFETAASIIISFDQNGIINDCNMR 601
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
V E+ G +E +G S + E+V E + V I GE N + ++ L K
Sbjct: 602 VQEILGYTPAELVGMSFL-EIVEEPFRHEVRRHIASLNRGEIIYNKDCRM----LHKDGK 656
Query: 707 VVYILVNACTSRDYKNNV-KGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
++VN T D +V +C + DIT +K + I + + VN I
Sbjct: 657 YRDVMVNCSTLLDENGSVTNAICIIS-DITEQKQTHNALIASEEKIRGMFNGVNE---GI 712
Query: 766 FASDENACCSEWNAAMEKVTGWM-RHEVIGK 795
D +E N + K+ + + ++IG+
Sbjct: 713 IVMDTQGYITEVNQTILKMNNYTSKDQMIGR 743
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 959 959 0.00095 122 3 11 22 0.38 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 628 (67 KB)
Total size of DFA: 458 KB (2217 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 79.33u 0.12s 79.45t Elapsed: 00:00:04
Total cpu time: 79.34u 0.12s 79.46t Elapsed: 00:00:04
Start: Fri May 10 19:26:10 2013 End: Fri May 10 19:26:14 2013