BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002152
(959 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255557437|ref|XP_002519749.1| phytochrome B, putative [Ricinus communis]
gi|223541166|gb|EEF42722.1| phytochrome B, putative [Ricinus communis]
Length = 1131
Score = 1525 bits (3949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 725/961 (75%), Positives = 829/961 (86%), Gaps = 15/961 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPV---NKGKTIIDHYNADAGLLAEFEQSVA 57
MG Q RE TT S+ + MKP ++ I YNADAGLLAEFEQS
Sbjct: 1 MGFQNARERGT-------TTLSSSAASSMKPFATNSENTATIAQYNADAGLLAEFEQSGV 53
Query: 58 SGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCL 117
SGKSFNYSRSV+S P VPEEQITAYLS+IQRGGLIQPFGCM+A+EEPTFRII YSENC
Sbjct: 54 SGKSFNYSRSVLSAPHNVPEEQITAYLSRIQRGGLIQPFGCMVAIEEPTFRIISYSENCF 113
Query: 118 EMLDLRSRS--EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSI 175
+L L + S E ++ GLIGID R LFTP SGASL+KAAASREIS+LNPI V+S R+
Sbjct: 114 HLLGLSASSVLESNQVKGLIGIDVRALFTPQSGASLSKAAASREISMLNPIWVYS--RTS 171
Query: 176 EKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLC 235
+KPFYAILHRIDVGIVIDLEP++SGDP LSLAGAVQSQKLAV AISRLQ+LPGGDIG+LC
Sbjct: 172 QKPFYAILHRIDVGIVIDLEPARSGDPVLSLAGAVQSQKLAVRAISRLQSLPGGDIGMLC 231
Query: 236 DTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFK 295
DTVVEDVQKLTGYDRVM+Y FHDDDHGEV+SEIRRSDLEPYLG+H+PA DIPQAARFLFK
Sbjct: 232 DTVVEDVQKLTGYDRVMVYKFHDDDHGEVLSEIRRSDLEPYLGLHYPATDIPQAARFLFK 291
Query: 296 QNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVII 355
QNRVRMICDCHA PV VIQS+ELK PLCLVNSTLRSPHGCH QYM NMGSIASLVMAV+I
Sbjct: 292 QNRVRMICDCHANPVRVIQSEELKHPLCLVNSTLRSPHGCHTQYMANMGSIASLVMAVVI 351
Query: 356 NSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQ 415
N DS KLWGLVVCHHTSPRY+PFPLRYACEFL+QAF LQLYMELQ+A +L EK IL+TQ
Sbjct: 352 NGNDSTKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLAAKLVEKKILQTQ 411
Query: 416 VLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLN 475
LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALYY G+CWL+G+TPTESQ+KDIA WLLN
Sbjct: 412 TLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYRGKCWLLGITPTESQVKDIADWLLN 471
Query: 476 NHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKH 535
NHGD TGL+TDSLA+AGYPGA LLG AVCGMATARITS+DFLFWFRSHTAKE+KWGGAKH
Sbjct: 472 NHGDSTGLTTDSLADAGYPGALLLGDAVCGMATARITSRDFLFWFRSHTAKEIKWGGAKH 531
Query: 536 HPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK 595
HPE KD+G +MHPRSSF AFLEVVK+RS PWEVSEINAIHSLQ++MRDSFQ+M E++ SK
Sbjct: 532 HPEDKDDGQRMHPRSSFNAFLEVVKSRSMPWEVSEINAIHSLQLIMRDSFQDM-EDSASK 590
Query: 596 VQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPA 655
N QQ + +QG+DELSSVACEMVRLIETATAPIFGVDS+G++NGWNAK+AELTGL A
Sbjct: 591 AMVNAQQTDTDVQGIDELSSVACEMVRLIETATAPIFGVDSAGSVNGWNAKIAELTGLQA 650
Query: 656 SEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNAC 715
SEAMGKSL+ EVVH++S VE+L+CRAL GEEDKNVELKLRKF L +Q+S V+++ NAC
Sbjct: 651 SEAMGKSLVREVVHKDSYEFVESLLCRALQGEEDKNVELKLRKFGLHQQNSAVFVVANAC 710
Query: 716 TSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCS 775
TSRDY NNV GVCFVGQD+T EK++MDKF+RLQGDY+ II+S+NPLIPPIFASDENACC
Sbjct: 711 TSRDYANNVIGVCFVGQDVTSEKIVMDKFLRLQGDYKVIIESLNPLIPPIFASDENACCC 770
Query: 776 EWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPF 835
EWNAAME++TG R EVIGKMLP EIFG CR+K QD LTKFMILLY+G++ Q T+ FPF
Sbjct: 771 EWNAAMERLTGRTRQEVIGKMLPGEIFGGLCRLKDQDTLTKFMILLYRGLSDQDTDKFPF 830
Query: 836 GFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKE 895
GFFNRQG+FVEV LTA++RTDA+GK IGCFCF+Q++ PDLQ L+ ED + K+K+
Sbjct: 831 GFFNRQGKFVEVFLTANKRTDADGKTIGCFCFLQVIGPDLQQTLDEHKQEDQESLLKLKQ 890
Query: 896 LAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
LAYIR+E+K+PL+GIRF HKLLE ++ SE+Q+Q+LETSDACE+QIMTII+ +DL +EEG
Sbjct: 891 LAYIREEMKSPLSGIRFTHKLLEDTATSEHQKQFLETSDACEKQIMTIIEDIDLAKLEEG 950
Query: 956 R 956
+
Sbjct: 951 K 951
>gi|183239028|gb|ACC60972.1| phytochrome E [Vitis riparia]
Length = 1124
Score = 1499 bits (3880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 715/940 (76%), Positives = 810/940 (86%), Gaps = 5/940 (0%)
Query: 17 HNTTPFKSSDAKMKPVNKGKT-IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGV 75
H T F SS A + I YNADA LLAEFEQS SGKSFNYSRSV++ PE V
Sbjct: 14 HRTPTFSSSAASNMNNPNSRNNTIAQYNADARLLAEFEQSGESGKSFNYSRSVMNAPESV 73
Query: 76 PEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGLI 135
PE+QI AYLS+IQRGGL+QPFGCMLA+EEPTFRII YSEN ++ L L + SE +L LI
Sbjct: 74 PEDQIIAYLSRIQRGGLVQPFGCMLAIEEPTFRIISYSENSMDFLGLNTLSETTQLKSLI 133
Query: 136 GIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLE 195
G+D RTLFTPPS ASLAKAA SREISLLNPI VHS RS +K FYAILHRIDVGIVIDLE
Sbjct: 134 GVDVRTLFTPPSSASLAKAAMSREISLLNPIWVHS--RSAQKTFYAILHRIDVGIVIDLE 191
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P++SGDPALSLAGAVQSQKLAV AISRLQ+LPGGDIG+LCDTVVEDVQKLTGYDRVM+Y
Sbjct: 192 PTRSGDPALSLAGAVQSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYK 251
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FHDDDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVR+ICDC+A V VIQS
Sbjct: 252 FHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNAKAVRVIQS 311
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPR 375
+ELKQPLCLVNSTLRSPHGCHLQYM NMG IASL MAV+IN D+ KLWGLVVCHHTSPR
Sbjct: 312 EELKQPLCLVNSTLRSPHGCHLQYMVNMGCIASLAMAVVINGNDATKLWGLVVCHHTSPR 371
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
Y+PFPLRYACEFL+QAF LQLYMELQ+A QLAEK ILR Q LLCDMLLR+AP IVT SP
Sbjct: 372 YVPFPLRYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSP 431
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
SIMDL+KCDGAAL+YGGRCWL+GVTPTESQ+KDIA WLL HGD TGLSTDSLA+AGYPG
Sbjct: 432 SIMDLLKCDGAALHYGGRCWLLGVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPG 491
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
AALLG AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE KD+GG+MHPRSSFKAF
Sbjct: 492 AALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAF 551
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK+RS PWEVSEINAIHSLQ++MRDSFQ++E+ + KV + Q+ S+MQG++ELSS
Sbjct: 552 LEVVKSRSLPWEVSEINAIHSLQLIMRDSFQDIEDSS-GKVMVHAQKYDSEMQGLNELSS 610
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
VACEMV+LIETATAPIFGVDSSG INGWNAK+AELT L A EAMGKSL+DE+VHE+ +GA
Sbjct: 611 VACEMVKLIETATAPIFGVDSSGCINGWNAKIAELTELQAKEAMGKSLVDEIVHEDLRGA 670
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+NL+CRAL G+EDKNVELKL+KF L +Q S +YI+VNACTSRDY N++ GVCFVGQDIT
Sbjct: 671 VDNLLCRALQGKEDKNVELKLKKFGLNQQDSALYIVVNACTSRDYTNDIVGVCFVGQDIT 730
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
EK++MDKFIRLQGDY+AI+QS+NPLIPPIFASD NACCSEWN ++EK+TGWMRHEVI K
Sbjct: 731 SEKIVMDKFIRLQGDYKAIVQSLNPLIPPIFASDGNACCSEWNTSLEKLTGWMRHEVIRK 790
Query: 796 MLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRT 855
MLP E+FG C +K QD LT+F ILLYQ I+GQ TE FPFGFF++ G+ VEV LTA++RT
Sbjct: 791 MLPGEVFGGLCPLKSQDTLTRFTILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTANKRT 850
Query: 856 DAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHK 915
DA G VIGCFCF+QI PD L G E + ++K KELAYIRQE+KNPLNGIRF HK
Sbjct: 851 DANGNVIGCFCFLQIDTPDKHQGL-GDGPEYRECFSKFKELAYIRQEMKNPLNGIRFTHK 909
Query: 916 LLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
LLE+++ S Q+Q+LETS+ACERQ+M+II +D+ IEEG
Sbjct: 910 LLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEG 949
>gi|225463382|ref|XP_002271671.1| PREDICTED: phytochrome E [Vitis vinifera]
gi|183239020|gb|ACC60968.1| phytochrome E [Vitis vinifera]
Length = 1124
Score = 1488 bits (3851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/940 (75%), Positives = 806/940 (85%), Gaps = 5/940 (0%)
Query: 17 HNTTPFKSSDAKMKPVNKGKT-IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGV 75
H T F SS A + I YNADA LLAEFEQS SGKSFNYSRSV++ PE V
Sbjct: 14 HRTPTFSSSAASNMNNPNSRNNTIAQYNADARLLAEFEQSGESGKSFNYSRSVMNAPESV 73
Query: 76 PEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGLI 135
PE+QI AYLS++QRGGL+QPFGCMLA+EEPTFRII YSEN ++ L L + SE +L LI
Sbjct: 74 PEDQIIAYLSRVQRGGLVQPFGCMLAIEEPTFRIISYSENSMDFLGLNTLSETTQLKSLI 133
Query: 136 GIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLE 195
G+D RTLFTPPS ASLAKAA SREISLLNPI VHS RS +K FYAILHRIDVGIVIDLE
Sbjct: 134 GVDVRTLFTPPSSASLAKAAMSREISLLNPIWVHS--RSAQKTFYAILHRIDVGIVIDLE 191
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P++SGD ALSLAGAVQSQKLAV AISRLQ+LPGGDIG+LCDTVVEDVQKLTGYDRVM+Y
Sbjct: 192 PTRSGDSALSLAGAVQSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYK 251
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FHDDDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVR+ICDC+A V VIQS
Sbjct: 252 FHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNAKAVRVIQS 311
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPR 375
+ELKQPLCLVNSTLRSPHGCHLQYM NMG IASL MAV+IN D+ KLWGLVVCHHTSPR
Sbjct: 312 EELKQPLCLVNSTLRSPHGCHLQYMFNMGCIASLAMAVVINGNDATKLWGLVVCHHTSPR 371
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
Y+PFPLRYACEFL+QAF LQLYMELQ+A QLAEK ILR Q LLCDMLLR+AP IVT SP
Sbjct: 372 YVPFPLRYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSP 431
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
SIMDL+KCDGAALYYGGRCWL+GVTPTESQ+KDIA WLL HGD TGLSTDSLA+AGYPG
Sbjct: 432 SIMDLLKCDGAALYYGGRCWLLGVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPG 491
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
AALLG AVCGMATARITSKDFL WFRSHTAKEVKWGGAKHHPE KD+GG+MHPRSSFKAF
Sbjct: 492 AALLGDAVCGMATARITSKDFLLWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAF 551
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK+RS PWEVS+INAIHSLQ++MRDSFQ++E+ + KV +TQ+ S+MQG++EL S
Sbjct: 552 LEVVKSRSLPWEVSDINAIHSLQLIMRDSFQDIEDSS-GKVMVHTQKYDSEMQGLNELGS 610
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
VACEMV+LIETATAPIFGVDSSG INGWNAK+AELTGL A EAMGKSL+DE+VHE+ +GA
Sbjct: 611 VACEMVKLIETATAPIFGVDSSGCINGWNAKIAELTGLQAKEAMGKSLVDEIVHEDLRGA 670
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+NL+CRAL G+EDKNVELKL+ F L +Q S +YI+VNACTSRDY N++ GVCFVGQDIT
Sbjct: 671 VDNLLCRALQGKEDKNVELKLKNFGLNQQDSALYIVVNACTSRDYTNDIVGVCFVGQDIT 730
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
EK++MDKFIRLQGDY+AI+Q +NPLIPPIFASD NACCSEWN ++EK+TG MRHEVI K
Sbjct: 731 SEKIVMDKFIRLQGDYKAIVQCLNPLIPPIFASDGNACCSEWNTSLEKLTGCMRHEVIRK 790
Query: 796 MLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRT 855
MLP E+FG C +K QD LT+F ILLYQ I+GQ TE FPFGFF++ G+ VEV LTA++RT
Sbjct: 791 MLPGEVFGGLCPLKSQDTLTRFTILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTANKRT 850
Query: 856 DAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHK 915
DA G VIGCFCF+QI PD L G E + ++K KELAYIRQE+KNPLNGIRF HK
Sbjct: 851 DANGNVIGCFCFLQIDTPDKHQGL-GHGPEYRECFSKFKELAYIRQEMKNPLNGIRFTHK 909
Query: 916 LLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
LLE+++ S Q+Q+LETS+ACERQ+M+II +D+ IEEG
Sbjct: 910 LLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEG 949
>gi|147775698|emb|CAN62723.1| hypothetical protein VITISV_030984 [Vitis vinifera]
Length = 1162
Score = 1474 bits (3816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/940 (75%), Positives = 800/940 (85%), Gaps = 5/940 (0%)
Query: 17 HNTTPFKSSDAKMKPVNKGKT-IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGV 75
H T F SS A + I YNADA LLAEFEQS SGKSFNYSRSV++ PE V
Sbjct: 14 HRTPTFSSSAASNMNNPNSRNNTIAQYNADARLLAEFEQSGESGKSFNYSRSVMNAPESV 73
Query: 76 PEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGLI 135
PE+QI AYLS+ QRGGL+QPFGCMLA+EEPTFRII YSEN ++ L L + SE +L LI
Sbjct: 74 PEDQIIAYLSRXQRGGLVQPFGCMLAIEEPTFRIISYSENSMDFLGLNTLSETTQLKSLI 133
Query: 136 GIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLE 195
G+D RTLFTPPS ASLAKAA SREISLLNPI VHS RS +K FYAILHRIDVGIVIDLE
Sbjct: 134 GVDVRTLFTPPSSASLAKAAMSREISLLNPIWVHS--RSAQKTFYAILHRIDVGIVIDLE 191
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P++SGD ALSLAGAVQSQKLAV AISRLQ+LPGGDIG+LCDTVVEDVQKLTGYDRVM+Y
Sbjct: 192 PTRSGDXALSLAGAVQSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYK 251
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FHDDDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQN VR+ICDC+A V VIQS
Sbjct: 252 FHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNXVRIICDCNAKAVRVIQS 311
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPR 375
+ELKQPLCLVNSTLRSPHGCHLQYM NMG IASL MAV+IN D+ KLWGLVVCHHTSPR
Sbjct: 312 EELKQPLCLVNSTLRSPHGCHLQYMXNMGCIASLAMAVVINGNDATKLWGLVVCHHTSPR 371
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
Y+PFPLRYACEFL+QAF LQLYMELQ+A QLAEK ILR Q LLCDMLLR+AP IVT SP
Sbjct: 372 YVPFPLRYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSP 431
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
SIMDL+KCDGAALYYGGRCWL+GVTPTESQ+KDIA WLL HGD TGLSTDSLA+AGYPG
Sbjct: 432 SIMDLLKCDGAALYYGGRCWLLGVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPG 491
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
AALLG AVCGMATARITSKDFL WFRSHTAKEVKWGGAKHHPE KD+GG+MHPRSSFKAF
Sbjct: 492 AALLGDAVCGMATARITSKDFLXWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAF 551
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK+RS PWEVS INAIHSLQ++MRDSFQ++E+ + KV + Q+ S+MQG++EL S
Sbjct: 552 LEVVKSRSLPWEVSXINAIHSLQLIMRDSFQDIEDSS-GKVMVHXQKYDSEMQGLNELXS 610
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
VACEMV+LIETATAPIFGVDSSG INGWNAK+AELT L A EAMGKSL+DE+VHE+ +GA
Sbjct: 611 VACEMVKLIETATAPIFGVDSSGCINGWNAKIAELTXLQAKEAMGKSLVDEIVHEDLRGA 670
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+NL+CRAL G+EDKNVELKL+ F L +Q S +YI+VNAC SRDY N++ GVCFVGQDIT
Sbjct: 671 VDNLLCRALQGKEDKNVELKLKNFGLNQQDSALYIVVNACXSRDYTNDIVGVCFVGQDIT 730
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
EK++MDKFIRLQGDY+AI+Q +NPLIPPIFASD NACCSEWN ++EK+TG MRHEVI K
Sbjct: 731 SEKIVMDKFIRLQGDYKAIVQXLNPLIPPIFASDGNACCSEWNTSLEKLTGXMRHEVIRK 790
Query: 796 MLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRT 855
MLP E+FG C +K QD LT+F ILLYQ I+GQ TE FPFGFF++ G+ VEV LTA++RT
Sbjct: 791 MLPGEVFGGLCPLKSQDTLTRFTILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTANKRT 850
Query: 856 DAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHK 915
DA G VIGCFCF+QI PD L G E + ++K KELAYIRQE+KNPLNGIRF HK
Sbjct: 851 DANGNVIGCFCFLQIDTPDKHQGL-GHGPEYRECFSKFKELAYIRQEMKNPLNGIRFTHK 909
Query: 916 LLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
LLE+++ S Q+Q+LETS+ACERQ+M+II +D+ IEEG
Sbjct: 910 LLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEG 949
>gi|1730566|sp|P55004.1|PHYE_IPONI RecName: Full=Phytochrome E
gi|1145714|gb|AAA84970.1| phytochrome E [Ipomoea nil]
Length = 1115
Score = 1416 bits (3665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/935 (73%), Positives = 787/935 (84%), Gaps = 6/935 (0%)
Query: 25 SDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYL 84
S + +N GK I YNADA L+AEFEQS SGKSF+YSRSVI P+ V EE++TAYL
Sbjct: 11 SSSATSNLNTGKAIA-QYNADAKLMAEFEQSRESGKSFDYSRSVIHAPQNVTEEEMTAYL 69
Query: 85 SKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGLIGIDARTLFT 144
S+IQRGGLIQPFGCMLA+EEP+F+I+G+SENC ++L L+S E E LIGIDARTLFT
Sbjct: 70 SRIQRGGLIQPFGCMLAIEEPSFKIVGFSENCFDLLGLKSGVEPPERMSLIGIDARTLFT 129
Query: 145 PPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPAL 204
S ASLAKA ASREISLLNPI VHS +KPFYA+LHRIDVGIVIDLEP+ S DPAL
Sbjct: 130 LSSRASLAKAVASREISLLNPIWVHSKIN--QKPFYAVLHRIDVGIVIDLEPANSADPAL 187
Query: 205 SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEV 264
LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQKLTGYDRVM+Y FHDD HGEV
Sbjct: 188 LLAGAVQSQKLAVRAISRLQSLPGGDIGTLCDTVVEDVQKLTGYDRVMVYKFHDDSHGEV 247
Query: 265 VSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCL 324
VSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+Q +ELKQPLCL
Sbjct: 248 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKVLQCEELKQPLCL 307
Query: 325 VNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYA 384
VNSTLRSPHGCH +YM NMGSIASLVMAV+INS +SMKLWGLVVCHHTSPRY+PFPLRYA
Sbjct: 308 VNSTLRSPHGCHTKYMANMGSIASLVMAVVINSSESMKLWGLVVCHHTSPRYVPFPLRYA 367
Query: 385 CEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCD 444
CEFL+QAFSLQLYMELQ+A QLAEK IL+TQ LLCDMLLRDAPF IVTQ+PSIMDLV+CD
Sbjct: 368 CEFLMQAFSLQLYMELQLASQLAEKKILQTQTLLCDMLLRDAPFGIVTQTPSIMDLVRCD 427
Query: 445 GAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVC 504
GAALYY G+CWL+GVTPTE+Q+KDIA WLL+NHGD TGLSTD L++AGYPGA LLG AV
Sbjct: 428 GAALYYNGKCWLLGVTPTETQVKDIAEWLLHNHGDSTGLSTDCLSDAGYPGAPLLGDAVS 487
Query: 505 GMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSF 564
GMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE KD+GG+MHPRSSF AFLEVVK+RS
Sbjct: 488 GMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFIAFLEVVKSRSL 547
Query: 565 PWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLI 624
PWE SEINAIHSLQ++MRDS Q + EN K + QQN S ELSS+A E+VRL+
Sbjct: 548 PWEDSEINAIHSLQLIMRDSLQGI-GENYMKSVSSPQQNDSDGVRFYELSSMALELVRLV 606
Query: 625 ETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
ETAT PIFGVDSSG INGWNAK+AELTGL A+ A+GK LID+V HE+S + L+CRAL
Sbjct: 607 ETATVPIFGVDSSGLINGWNAKIAELTGLQANVAIGKYLIDDVTHEDSHETFKALMCRAL 666
Query: 685 LGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKF 744
GEED+NVE+KL KF VVY++VNACTSRDYKN++ GVCFVGQDIT EK +MDKF
Sbjct: 667 QGEEDRNVEVKLLKFGNHPTKEVVYLVVNACTSRDYKNDIIGVCFVGQDITPEKAVMDKF 726
Query: 745 IRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN 804
+RLQGDYEAIIQS+NPLIPPIFASDENACCSEWNAAME++TG ++ EVIGK LP EIFG
Sbjct: 727 VRLQGDYEAIIQSLNPLIPPIFASDENACCSEWNAAMERLTGLVKCEVIGKRLPGEIFGG 786
Query: 805 FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGC 864
CR+KGQD LTKFMILLYQGI+G TE FGFF+R+G F++V +TA++RTD G +IGC
Sbjct: 787 LCRLKGQDALTKFMILLYQGISGHDTEKLSFGFFDRKGNFIDVFITANKRTDERGNIIGC 846
Query: 865 FCFMQILVPDLQPALEAQGLE-DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
FCF+Q + D P + A+ +E D + + +KE AYI+Q++KNPLNGIRF HKLLE + S
Sbjct: 847 FCFLQTMAVD-HPQISARDIEDDRECLSTLKEFAYIQQQMKNPLNGIRFTHKLLEGTVTS 905
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCV 958
++Q+Q+LETS+ACE+QI++II+ MD I +G V
Sbjct: 906 DHQKQFLETSEACEKQILSIIENMDSGGIVDGNRV 940
>gi|356532946|ref|XP_003535030.1| PREDICTED: phytochrome E-like [Glycine max]
Length = 1120
Score = 1408 bits (3645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/944 (70%), Positives = 791/944 (83%), Gaps = 5/944 (0%)
Query: 12 SIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISP 71
S G +T+ S+++ M +K I+ Y+ADA +LAEFEQS SGKSF+YSR V+ P
Sbjct: 5 SRGKLKDTSLSTSAESNMN--SKRDKILAQYSADAEILAEFEQSGVSGKSFDYSRMVLDP 62
Query: 72 PEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFEL 131
P V E+++TAYLSKIQRGGLIQPFGCMLA+EE TFRIIG+S+NC ++L L + + +
Sbjct: 63 PRLVSEQKMTAYLSKIQRGGLIQPFGCMLAIEESTFRIIGFSDNCFQLLGLERQIDSKQF 122
Query: 132 NGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIV 191
GLIG+DA TLFTPPSGASLAKAAASREISLLNPI V++ R+ +KPFYAILHRIDVG+V
Sbjct: 123 MGLIGVDATTLFTPPSGASLAKAAASREISLLNPIWVYA--RTTQKPFYAILHRIDVGVV 180
Query: 192 IDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRV 251
IDLEP++ DPALSLAGAVQSQKLAV AISRLQ+LPG DIGLLCDTVVE+VQKLTGYDRV
Sbjct: 181 IDLEPARMSDPALSLAGAVQSQKLAVRAISRLQSLPGEDIGLLCDTVVEEVQKLTGYDRV 240
Query: 252 MLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVM 311
M+Y FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQA+RFLFKQNRVRMICDCHA PV
Sbjct: 241 MVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQASRFLFKQNRVRMICDCHAKPVK 300
Query: 312 VIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHH 371
VIQS+EL+QPLCLVNSTLR PHGCH QYM NMGSIASLVMA+++N K + +LWGL+VCHH
Sbjct: 301 VIQSEELRQPLCLVNSTLRLPHGCHTQYMANMGSIASLVMAIVVNGKHATRLWGLLVCHH 360
Query: 372 TSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIV 431
TSPRY+ FP+RYACEFL+QAF LQLYME+Q+A Q+AEK IL+TQ LLCDMLLRDAP IV
Sbjct: 361 TSPRYVSFPVRYACEFLMQAFGLQLYMEIQLASQMAEKRILKTQTLLCDMLLRDAPLGIV 420
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
QSPSIMDLVKCDGAALYY G CWL+G TPTE+Q+KDIA WLL+NHGD TGL+TDSLA+A
Sbjct: 421 NQSPSIMDLVKCDGAALYYEGNCWLLGTTPTEAQVKDIAEWLLSNHGDSTGLTTDSLADA 480
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG AVCGMATARI SK FLFWFRSHTAKEVKWGGAKHHPE KD+GGKM+PRSS
Sbjct: 481 GYPGAASLGDAVCGMATARINSKHFLFWFRSHTAKEVKWGGAKHHPEDKDDGGKMNPRSS 540
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVD 611
FKAFLEVVK++S PWEV EINAIHSLQ+++RDSFQ+ E K Q++ + G+D
Sbjct: 541 FKAFLEVVKSKSLPWEVPEINAIHSLQLIIRDSFQDT-ENTGPKTLTYVQKSDTATGGMD 599
Query: 612 ELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEE 671
ELSSVA EMVRLIETAT PIFGVD G INGWN K+AELTGL ASEAMGKSL++E++H +
Sbjct: 600 ELSSVALEMVRLIETATVPIFGVDLGGVINGWNTKIAELTGLQASEAMGKSLVNEIIHAD 659
Query: 672 SQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVG 731
S ++ + RAL G+EDKNVELK++ F L +Q V Y++VNACTSRD+ + + GVCFVG
Sbjct: 660 SCDTFKSTLSRALQGQEDKNVELKIKHFGLDQQQEVAYLVVNACTSRDHTDAIVGVCFVG 719
Query: 732 QDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHE 791
QDIT EKV+ DKFI+L+GDY+AIIQS++PLIPPIF+SDENACCSEWNAAME++TGW R E
Sbjct: 720 QDITCEKVVQDKFIQLEGDYKAIIQSLSPLIPPIFSSDENACCSEWNAAMERLTGWKRDE 779
Query: 792 VIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
VIGK+LP EIFG+FCR+KGQD LT FMILLY+GI+GQ +E PFGFF+R G+F+E +TA
Sbjct: 780 VIGKLLPGEIFGSFCRLKGQDTLTNFMILLYRGISGQDSEKIPFGFFDRNGEFIETYITA 839
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R D G ++GCFCF+QI++PDL E + ++ KELAYI QE+K PLNGIR
Sbjct: 840 NKRIDTGGNMLGCFCFLQIVMPDLNQPSEEHKPRGRESISESKELAYILQEMKKPLNGIR 899
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F KLLE++++SENQ+Q+L+TSDACERQI+ II+ +L I EG
Sbjct: 900 FTRKLLENTAVSENQKQFLDTSDACERQILAIIEDTNLGSINEG 943
>gi|6708129|gb|AAF25812.1|AF178571_1 phytochrome E [Solanum lycopersicum]
Length = 1137
Score = 1397 bits (3616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/933 (70%), Positives = 775/933 (83%), Gaps = 8/933 (0%)
Query: 24 SSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAY 83
SS A N K + YNADA L+AEFEQS SGKSF+YS+SV+ PP EE+IT+Y
Sbjct: 34 SSAASNMKNNASKAALAQYNADAKLMAEFEQSSVSGKSFDYSKSVLFPPHEANEEEITSY 93
Query: 84 LSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGLIGIDARTLF 143
LS+IQRGGL+QPFGCM+A+EEPTF+IIGYSENC +ML + GLIG+DAR LF
Sbjct: 94 LSRIQRGGLVQPFGCMVAIEEPTFKIIGYSENCYDMLGFKPTKMKL---GLIGVDARNLF 150
Query: 144 TPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPA 203
TP SG SLAK ASREISLLNPI VHS R+ KPFYAILHRIDVGIVIDLEP+ S DPA
Sbjct: 151 TPSSGDSLAKVMASREISLLNPIWVHS--RTTHKPFYAILHRIDVGIVIDLEPANSSDPA 208
Query: 204 LSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGE 263
L LAGAVQSQKLAV +ISRLQ+LPGGDIG+LCDT VEDVQKLTGYDRVM+Y FHDD+HGE
Sbjct: 209 LLLAGAVQSQKLAVRSISRLQSLPGGDIGVLCDTAVEDVQKLTGYDRVMVYKFHDDNHGE 268
Query: 264 VVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLC 323
+VSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+QS+ELKQP+C
Sbjct: 269 IVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKVVQSEELKQPIC 328
Query: 324 LVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRY 383
LVNSTLRSPH CH +YM NMGSI+SLVMA++INS DSMKLWGL+VCHHTSPRY+PFPLRY
Sbjct: 329 LVNSTLRSPHECHSKYMANMGSISSLVMAILINSGDSMKLWGLIVCHHTSPRYVPFPLRY 388
Query: 384 ACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKC 443
ACEF QAF LQL MELQ+A QLAEK L+ Q LLCDMLLRD PF +VTQSPSIMDLVKC
Sbjct: 389 ACEFFTQAFGLQLNMELQLASQLAEKKTLQMQTLLCDMLLRDVPFGVVTQSPSIMDLVKC 448
Query: 444 DGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAV 503
DGAALY GG+CWL+GVTPTE+Q+KDIA WLL H D TGLSTD LA+AGYPGAALLG AV
Sbjct: 449 DGAALYCGGKCWLLGVTPTEAQVKDIAQWLLVAHKDSTGLSTDCLADAGYPGAALLGDAV 508
Query: 504 CGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRS 563
CGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD+GGKMHPRSSF AFLEVVK+RS
Sbjct: 509 CGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKDDGGKMHPRSSFNAFLEVVKSRS 568
Query: 564 FPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRL 623
PWE+ EINAIHSLQI+MR+S QE E + K +QQN + +DELSSVA EMVRL
Sbjct: 569 LPWEIPEINAIHSLQIIMRESIQE-NENSSLKTLTTSQQNDADGPSMDELSSVAMEMVRL 627
Query: 624 IETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRA 683
IETATAPIFGVD SG INGWN K+A+LTGL ASEA+G SLI+++ HE+S+G VE ++ RA
Sbjct: 628 IETATAPIFGVDPSGLINGWNEKIADLTGLHASEAVGMSLINDITHEDSRGTVEKVLHRA 687
Query: 684 LLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDK 743
LLGEE+KNVE+KLR+F SV+Y+++NACTSRD+KN V GV FV QD+T EK +MDK
Sbjct: 688 LLGEEEKNVEIKLRRFGKDPPGSVIYLVINACTSRDHKNGVVGVSFVAQDVTPEKFIMDK 747
Query: 744 FIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFG 803
FI+L+GDYEAI+QS++PLIPPIFASDENACCSEWNAAME++TGW ++EV+G+ LP E+FG
Sbjct: 748 FIQLRGDYEAIVQSLSPLIPPIFASDENACCSEWNAAMERLTGWTKYEVMGRTLPGEVFG 807
Query: 804 NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
CR+ GQD LTKFMIL YQ I+G T+ PFGFFNR+G+F+EV LTA++RTD G V G
Sbjct: 808 GLCRLTGQDALTKFMILFYQAISGHDTKKLPFGFFNRRGEFLEVFLTANKRTDEHGNVCG 867
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CFCF+Q + D + + E Q + D K KE Y+ Q++KNPLNGI+F HKLLE++ +S
Sbjct: 868 CFCFLQPMTIDPEASDERQ--DSKDSLWKYKEYVYVLQQMKNPLNGIQFTHKLLEATGVS 925
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEGR 956
+NQ+Q LETS+ACE+QI+++ID MD IE+G+
Sbjct: 926 DNQKQLLETSEACEKQILSVIDNMDFGGIEDGK 958
>gi|449459392|ref|XP_004147430.1| PREDICTED: phytochrome E-like [Cucumis sativus]
Length = 1134
Score = 1392 bits (3602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/921 (71%), Positives = 779/921 (84%), Gaps = 10/921 (1%)
Query: 41 HYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCML 100
YNADAGLL +FE S ASG+SFNYSRSV+ P VPEEQITAYLSKIQRGGL+QPFGC+L
Sbjct: 43 QYNADAGLLNKFELSDASGESFNYSRSVLEAPVSVPEEQITAYLSKIQRGGLVQPFGCLL 102
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSRSEDFE----LNGLIGIDARTLFTPPSGASLAKAAA 156
A+EE +F+II +SENC E+L L + F GLIG+D R LFTP SGASLAKAA+
Sbjct: 103 AIEESSFKIISFSENCFELLGLND--DQFGSAQGKKGLIGVDMRALFTPSSGASLAKAAS 160
Query: 157 SREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLA 216
SREISLLNP+ V+S R+ +KPFYAILHRIDVGIVIDLEP++S DPALSLAGAVQSQKLA
Sbjct: 161 SREISLLNPVWVYS--RTTQKPFYAILHRIDVGIVIDLEPARSVDPALSLAGAVQSQKLA 218
Query: 217 VSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPY 276
V AISRLQALP GDIG+LCDTVVED+QKLTGYDRVM+Y FHDD+HGEVVSEIRRSDLEPY
Sbjct: 219 VRAISRLQALPSGDIGILCDTVVEDIQKLTGYDRVMVYKFHDDEHGEVVSEIRRSDLEPY 278
Query: 277 LGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCH 336
LG+H+PA DIPQAARFLFKQNR+RMICDC+A PV VIQS +LKQPLCLVNST+R+PH CH
Sbjct: 279 LGLHYPAIDIPQAARFLFKQNRIRMICDCNAKPVPVIQSDDLKQPLCLVNSTIRAPHSCH 338
Query: 337 LQYMTNMGSIASLVMAVIINSKDS-MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQ 395
LQYM NM +++SL MA+++NS DS +LWGLVVCHHTSPRY+PFPLRYACEFL+QAF LQ
Sbjct: 339 LQYMANMSTLSSLAMAIVMNSDDSPTRLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQ 398
Query: 396 LYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCW 455
LYMELQ+A QL EK IL+TQ LLCDMLLR +P +++T+SPSIMDLVKCDGAALYY G C+
Sbjct: 399 LYMELQLASQLTEKKILKTQTLLCDMLLRGSPCALLTRSPSIMDLVKCDGAALYYKGACY 458
Query: 456 LVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKD 515
L+G+TPTE+Q+KD+A W+LNNHGD TGLSTDSLA+AGYP AA LG AVCGMATARITSKD
Sbjct: 459 LLGITPTEAQVKDLAEWILNNHGDSTGLSTDSLADAGYPEAASLGDAVCGMATARITSKD 518
Query: 516 FLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIH 575
FLFWFRSH AKE++WGGAKHHP+ KD+ G+MHPRSSFKAFLEV K+RS WEV EINAIH
Sbjct: 519 FLFWFRSHVAKEIQWGGAKHHPDDKDDSGRMHPRSSFKAFLEVAKSRSLSWEVQEINAIH 578
Query: 576 SLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVD 635
SLQ++MR+SF + N SK + + Q + ++MQ ++ELSSVACEMVRLIETAT PIFGVD
Sbjct: 579 SLQLIMRESFPNSGDSN-SKAENSPQLSDAEMQDINELSSVACEMVRLIETATVPIFGVD 637
Query: 636 SSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELK 695
S+G INGWNAK++EL GL EA+GKSL++E+VHE+S+G E+L+ AL G+EDKNVELK
Sbjct: 638 STGLINGWNAKISELVGLHTGEALGKSLVNEIVHEDSRGTAEDLLSCALQGKEDKNVELK 697
Query: 696 LRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAII 755
LR F K+H VYI+VNACTSRDY N V GVCFVGQD+T EK +MDKFIRLQGDY+ II
Sbjct: 698 LRSFRTDKEHPNVYIVVNACTSRDYTNKVVGVCFVGQDLTSEKGVMDKFIRLQGDYKTII 757
Query: 756 QSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLT 815
+S++PLIPP+F SDEN C EW AAMEK+TGW ++EV+GKML EIFGNFCR+KG D LT
Sbjct: 758 ESLSPLIPPMFVSDENGYCCEWTAAMEKLTGWRKNEVVGKMLAGEIFGNFCRLKGLDTLT 817
Query: 816 KFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDL 875
+FMILLYQGI+GQ TE FP GFFN+ G +V+V LT+++RTDAEG IGC CF+QI+ P+L
Sbjct: 818 RFMILLYQGISGQVTEKFPLGFFNKDGNYVDVLLTSNKRTDAEGNAIGCICFLQIVQPNL 877
Query: 876 QPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDA 935
LE G D + + KEL++++ EVKNPLNG+RF+H+LL +S I+ENQ+ +L+TSDA
Sbjct: 878 HGVLEGLGTGDREAILQHKELSFLKHEVKNPLNGLRFMHELLVNSGITENQKLFLDTSDA 937
Query: 936 CERQIMTIIDGMDLRCIEEGR 956
CERQIMTII+ MD R +E G+
Sbjct: 938 CERQIMTIIEDMDFRSLEGGQ 958
>gi|356556523|ref|XP_003546574.1| PREDICTED: phytochrome E-like [Glycine max]
Length = 1121
Score = 1379 bits (3568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 655/935 (70%), Positives = 777/935 (83%), Gaps = 11/935 (1%)
Query: 24 SSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAY 83
S+ A+ K I+ Y+ADA +LAEFE S SGKSF+YSR V+ P V E+++TAY
Sbjct: 15 STSAESNTNTKRDKILAQYSADAEILAEFELSGVSGKSFDYSRMVLDPSRLVSEQKMTAY 74
Query: 84 LSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGLIGIDARTLF 143
LSKIQRGGLIQPFGCMLA+EE TFRIIGYS+NC ++L L + + + LIG+DA TLF
Sbjct: 75 LSKIQRGGLIQPFGCMLAIEESTFRIIGYSDNCFQLLGLERQIDSKQFMNLIGVDATTLF 134
Query: 144 TPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPA 203
TPPSGASLAKAAASREISLLNPI V++ R+ +KPFYAILHRIDVG+VIDLEP++ DP
Sbjct: 135 TPPSGASLAKAAASREISLLNPIWVYA--RTTQKPFYAILHRIDVGVVIDLEPARMSDPT 192
Query: 204 LSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGE 263
LSLAGAVQSQKLAV AISRLQ+LPG DIGLLCDTVVE+VQKLTGYDRVM+Y FH+DDHGE
Sbjct: 193 LSLAGAVQSQKLAVRAISRLQSLPGEDIGLLCDTVVEEVQKLTGYDRVMVYKFHEDDHGE 252
Query: 264 VVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM-ICDCHAIPVMVIQSKELKQPL 322
VVSEIRRSDLEPYLG+H+PA DIPQA+RFLFKQNRVRM ICDCHA PV VIQS+EL+QPL
Sbjct: 253 VVSEIRRSDLEPYLGLHYPATDIPQASRFLFKQNRVRMMICDCHAKPVKVIQSEELRQPL 312
Query: 323 CLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLR 382
CLVNSTLR PHGCH QYM NMGSIASLVMA+I+N KD+ +LWGL+VCHHTSPR + F +R
Sbjct: 313 CLVNSTLRLPHGCHTQYMANMGSIASLVMAIIVNGKDATRLWGLLVCHHTSPRSVSFLVR 372
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL+Q F LQLYME+Q+A Q+AEK IL+TQ LLCDMLLRDAPF IV QSPSIMDLVK
Sbjct: 373 YACEFLMQTFGLQLYMEIQLASQMAEKRILKTQTLLCDMLLRDAPFGIVNQSPSIMDLVK 432
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAALYY G CWL+G TPTE+Q+KDIA WLL+NHGD TGL+TDSLA+AGYPGAA LG A
Sbjct: 433 CDGAALYYEGNCWLLGTTPTEAQVKDIAEWLLSNHGDSTGLTTDSLADAGYPGAASLGDA 492
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMATARI SK FLFWFRSHTAKEVKWGGAKHHPE KD+GGKM+PRSSFKAFLEVVK++
Sbjct: 493 VCGMATARINSKHFLFWFRSHTAKEVKWGGAKHHPEDKDDGGKMNPRSSFKAFLEVVKSK 552
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVR 622
S PWEV EINAIHSLQ+++RDSFQ+ E K Q++ + G+DELSSVA +MVR
Sbjct: 553 SLPWEVLEINAIHSLQLIIRDSFQDTENTG-PKTLSYVQKSDTAAGGMDELSSVALQMVR 611
Query: 623 LIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICR 682
LIETAT PIFGVD G INGWN K+AELTGL ASEAMGKSL++E++H +S +N + R
Sbjct: 612 LIETATVPIFGVDLGGVINGWNTKIAELTGLQASEAMGKSLVNEIIHADSGDTFKNTLSR 671
Query: 683 ALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMD 742
AL G+EDKNVELK++ F L +Q V ++VNAC SRDY + + GVCFVG+DIT+EKV+ D
Sbjct: 672 ALQGQEDKNVELKIKHFGLDQQQEVACLMVNACISRDYTDAIVGVCFVGEDITYEKVVQD 731
Query: 743 KFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF 802
KFI+L+GDY+AIIQS++PLIPPIF+SDEN CCSEWNAAME++TGW R EVIGK+LP EIF
Sbjct: 732 KFIKLEGDYKAIIQSLSPLIPPIFSSDENVCCSEWNAAMERLTGWKRDEVIGKLLPGEIF 791
Query: 803 GNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVI 862
G+FCR+KGQD LT FMILLY+GI+ Q +E PFGFF+R G+F+E +TA+++ DA G ++
Sbjct: 792 GSFCRLKGQDTLTNFMILLYRGISRQDSEKLPFGFFHRNGEFIETYITANKKIDAGGNML 851
Query: 863 GCFCFMQILVPDL-QPALE--AQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLES 919
GCFCF+QI++PDL QP+ E +G E + E AYI QE+K PLNGIRF KLLE+
Sbjct: 852 GCFCFLQIVMPDLNQPSEEHNPRGRESI----SESEEAYILQEMKKPLNGIRFTRKLLEN 907
Query: 920 SSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
+++SENQ+Q+L+TSDACERQIM II+ L I E
Sbjct: 908 TTVSENQKQFLDTSDACERQIMAIIEDTHLGSINE 942
>gi|224285845|gb|ACN40636.1| unknown [Picea sitchensis]
Length = 1132
Score = 1332 bits (3446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 645/968 (66%), Positives = 769/968 (79%), Gaps = 22/968 (2%)
Query: 3 LQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSF 62
+ N T S G N + S T + YNADA LL FEQS SGKSF
Sbjct: 1 MASNSRHTQSQSTGSNN---RRSSINTNTTTNKATAMAQYNADARLLQVFEQSGESGKSF 57
Query: 63 NYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDL 122
+Y+RS+ S E VPE+QITAYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL
Sbjct: 58 DYTRSIKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDL 117
Query: 123 RSRS----EDFELNGL-IGIDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIE 176
+S E +L L IG D RTLFT S SL KAA ++EISL+NPI VH NSR
Sbjct: 118 APQSVPSMEQPQLEVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR--- 174
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HRIDVG+VID EP K+GD +S AGAVQSQKLAV AISRLQ+LP GDI LLCD
Sbjct: 175 KPFYAIVHRIDVGMVIDFEPLKTGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCD 234
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
+VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF Q
Sbjct: 235 SVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQ 294
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMICDC A PV VIQS+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN
Sbjct: 295 NRVRMICDCMATPVQVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIIN 354
Query: 357 SKD---------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLA 407
D SMKLWGLVVCHHTSPR +PFPLRYACEF++QAF LQL MELQ+A QL
Sbjct: 355 GNDDEGAGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLT 414
Query: 408 EKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLK 467
EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+K
Sbjct: 415 EKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIK 474
Query: 468 DIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKE 527
DIA WLL +HGD TGLSTDSLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE
Sbjct: 475 DIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKE 534
Query: 528 VKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQE 587
+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ+
Sbjct: 535 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQD 594
Query: 588 MEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+++ +K +++ N ++QG+DELSSVA EMVRLIETATAPI VD +G +N WNAKV
Sbjct: 595 IDDSG-TKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNVWNAKV 653
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGLP EAMG SL+ ++V EES V+ ++C A+ GEE+KNVE+ LR F QKQ
Sbjct: 654 AELTGLPVGEAMGMSLVQDLVFEESVERVKKMLCNAIRGEEEKNVEMILRTFGPQKQKEA 713
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
V+++VNAC+SRD+ NN+ GVCFVGQD+T +KV+MDKFIR+QGDY +I+Q+ NPLIPPIFA
Sbjct: 714 VFLVVNACSSRDFTNNIVGVCFVGQDVTGQKVVMDKFIRIQGDYRSIVQNPNPLIPPIFA 773
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITG 827
SDE+ACCSEWNAAME VTGW R EVIGKML EIFG CR+KGQD +TKF I+L+ I G
Sbjct: 774 SDESACCSEWNAAMENVTGWARDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHSAIDG 833
Query: 828 QGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDM 887
E FPF FF++QG++VE LTA++RTDA+G++ G FCF+QI +L+ ALE Q ++
Sbjct: 834 HEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELRQALEVQRQQEK 893
Query: 888 DIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGM 947
+A++KELAYIRQE+KNPL G+ F KLLE + +S++Q+Q++ETS CERQ+ +ID M
Sbjct: 894 KCFARLKELAYIRQEIKNPLYGMMFTRKLLEETDLSDDQKQFVETSAVCERQMQKVIDDM 953
Query: 948 DLRCIEEG 955
DL +E+G
Sbjct: 954 DLDSLEDG 961
>gi|297800250|ref|XP_002868009.1| hypothetical protein ARALYDRAFT_914880 [Arabidopsis lyrata subsp.
lyrata]
gi|297313845|gb|EFH44268.1| hypothetical protein ARALYDRAFT_914880 [Arabidopsis lyrata subsp.
lyrata]
Length = 1116
Score = 1330 bits (3441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/948 (68%), Positives = 767/948 (80%), Gaps = 31/948 (3%)
Query: 24 SSDAKMKPVNKGK---TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
S+ + MKP+ K + Y+ DA L A+F+QS+ SGKSFNYS+SVISPP VP+E I
Sbjct: 8 SAASNMKPLGDSKPQKSNTAQYSVDAALFADFDQSIYSGKSFNYSKSVISPPNYVPDEHI 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDL-----RSRSEDFE-LNGL 134
TAYLS IQRGGL+QPFGC++AVEEP+FRI+G SEN E L L S S +F+ + GL
Sbjct: 68 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENSSEFLGLLSLASTSHSGEFDKVKGL 127
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IGIDARTLFTP SGASLAKAA+ EISLLNP+LVHS R+ +KPFYAILHRID GIV+DL
Sbjct: 128 IGIDARTLFTPSSGASLAKAASFTEISLLNPVLVHS--RTTQKPFYAILHRIDAGIVMDL 185
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP+KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG CDTVVEDVQ+LTGYDRVM+Y
Sbjct: 186 EPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGAFCDTVVEDVQRLTGYDRVMVY 245
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+Q
Sbjct: 246 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQ 305
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSP 374
S+ELK+PLCLVNSTLR+PHGCH QYM NMGS+ASL +A++I KDS KLWGLVV HH SP
Sbjct: 306 SEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVIKGKDSSKLWGLVVGHHCSP 365
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
RY+PFPLRYACEFL+QAF LQL MELQ+A QLAEK +RTQ LLCDMLLRD +IVTQS
Sbjct: 366 RYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAIVTQS 425
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGY 493
P IMDLVKCDGAALYY G+CWLVGVTP ESQ+KD+ WL+ NHG D TGL+TDSL +AGY
Sbjct: 426 PGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLVDAGY 485
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA LG AVCG+A A I+SKD+L WFRS+TA +KWGGAKH P+ KD+ G+MHPRSSFK
Sbjct: 486 PGAISLGDAVCGVAAAGISSKDYLLWFRSNTASAIKWGGAKHRPKDKDDAGRMHPRSSFK 545
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEV K+RS PWE+SEI+AIHSL+++MR+SF + GN + +EL
Sbjct: 546 AFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSCR----PVLSGN-----DVARDANEL 596
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+S CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL +E+V EES+
Sbjct: 597 TSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLANEIVQEESR 656
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQH----SVVYILVNACTSRDYKNNVKGVCF 729
+E+L+C+AL GEE+K+V LKLRKF Q H S V +LVN+CTSRDY + GVCF
Sbjct: 657 AVLESLLCKALQGEEEKSVMLKLRKFG-QNNHPDSSSDVCVLVNSCTSRDYTEKIIGVCF 715
Query: 730 VGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMR 789
VGQDIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDENACCSEWNAAMEK+TGW +
Sbjct: 716 VGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSK 775
Query: 790 HEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQG-TENFPFGFFNRQGQFVEVA 848
HEVIGKMLP E+FG FC++K QD LTKF+I LYQGI G TE+ FF+++G+++E +
Sbjct: 776 HEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVTESSLVEFFSKEGRYIEAS 835
Query: 849 LTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLN 908
LTA++ T+ EGKVI CF F+QI+ + + L L++ + EL YIRQE+KNPLN
Sbjct: 836 LTANKSTNIEGKVIRCFFFLQII--NKESGLSCPELKES--AQSLNELTYIRQEIKNPLN 891
Query: 909 GIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGR 956
GIRF HKLLESS IS +QRQ+LETSDACE+QI TII+G DL+ IEEG+
Sbjct: 892 GIRFAHKLLESSEISASQRQFLETSDACEKQITTIIEGTDLKSIEEGK 939
>gi|226234965|dbj|BAH47472.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/946 (67%), Positives = 766/946 (80%), Gaps = 29/946 (3%)
Query: 24 SSDAKMKPVNKGK---TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
S+ + MKP+ K + Y+ DAGL A+F+QSV SGKSFNYS+SVISP V +E I
Sbjct: 8 SAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNHVSDEHI 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLE---MLDLRSRSEDFELN---GL 134
TAYLS IQRGGL+QPFGC++AVEEP+FRI+G SENC+E +L L S S+ E N GL
Sbjct: 68 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL 127
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IGIDARTLF+P SGASL+KAA+ EISLLNP+LVHS ++ +KPFYAILHRID GIVIDL
Sbjct: 128 IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHS--KTTQKPFYAILHRIDAGIVIDL 185
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
E +KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y
Sbjct: 186 EAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVY 245
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV ++Q
Sbjct: 246 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKIVQ 305
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSP 374
S+ELK+PLCLVNSTLR+PH CH QYM NMGSIASL +A+++ KDS KLWGLVV HH SP
Sbjct: 306 SEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVGHHCSP 365
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
RY+PFPLRYACEFL+QAF LQL MELQ+ QLAEK +RTQ LLCDMLLRD +IVTQS
Sbjct: 366 RYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQS 425
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGY 493
P IMDLVKCDGAALYY G+CWLVGVTP+E Q+KD+ WL+ NHG D TGL+TDSL + GY
Sbjct: 426 PGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDVGY 485
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA G A+CG+A A I+SKDFL WFRS+TA +KWGGAKHHP++KD+ G+MHPRSSFK
Sbjct: 486 PGAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFK 545
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEV K+RS PWE+SEI+AIHSL+++MR+SF + + N + + +EL
Sbjct: 546 AFLEVAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSANVVE-----RDANEL 596
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+S CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL +E+V EES+
Sbjct: 597 TSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESR 656
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQ---HSVVYILVNACTSRDYKNNVKGVCFV 730
A+E+L+C+AL GEE+KNV LKLRKF S V++LVN+CTSRDY + GVCFV
Sbjct: 657 AALESLMCKALQGEEEKNVMLKLRKFGHNNHPYYSSGVFVLVNSCTSRDYTEKIIGVCFV 716
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQDIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDENACCSEWNAAMEK+TGW +H
Sbjct: 717 GQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKH 776
Query: 791 EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVAL 849
EVIGKMLP E+FG FC++K QD LTKF+I LYQGI E+ GFFN++G+++E +L
Sbjct: 777 EVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLLGFFNKEGKYIEASL 836
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
TA++ T+ EGKVIGCF F+QI+ D L GL++ + EL Y++QE+KNPL+G
Sbjct: 837 TANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES--AQSLNELTYMKQEIKNPLSG 892
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
IRF HKLLESS ISE QR++LETSDACE+QI TII+G DL+ IEEG
Sbjct: 893 IRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEG 938
>gi|452817|emb|CAA54075.1| phytochrome E [Arabidopsis thaliana]
gi|5816999|emb|CAB53654.1| phytochrome E [Arabidopsis thaliana]
gi|7268606|emb|CAB78815.1| phytochrome E [Arabidopsis thaliana]
Length = 1112
Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/945 (68%), Positives = 766/945 (81%), Gaps = 29/945 (3%)
Query: 24 SSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAY 83
S+ + MKP K+ Y+ DA L A+F QS+ +GKSFNYS+SVISPP VP+E ITAY
Sbjct: 8 SAASNMKP-QPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNHVPDEHITAY 66
Query: 84 LSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDL-----RSRSEDFE-LNGLIGI 137
LS IQRGGL+QPFGC++AVEEP+FRI+G S+N + L L S S +F+ + GLIGI
Sbjct: 67 LSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLLSLPSTSHSGEFDKVKGLIGI 126
Query: 138 DARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPS 197
DARTLFTP SGASL+KAA+ EISLLNP+LVH SR+ +KPFYAILHRID GIV+DLEP+
Sbjct: 127 DARTLFTPSSGASLSKAASFTEISLLNPVLVH--SRTTQKPFYAILHRIDAGIVMDLEPA 184
Query: 198 KSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFH 257
KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y FH
Sbjct: 185 KSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFH 244
Query: 258 DDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKE 317
+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+QS+E
Sbjct: 245 EDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEE 304
Query: 318 LKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYI 377
LK+PLCLVNSTLR+PHGCH QYM NMGS+ASL +A+++ KDS KLWGLVV HH SPRY+
Sbjct: 305 LKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSSKLWGLVVGHHCSPRYV 364
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QLAEK +RTQ LLCDMLLRD +IVTQSP I
Sbjct: 365 PFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSPGI 424
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGYPGA 496
MDLVKCDGAALYY G+CWLVGVTP ESQ+KD+ WL+ NHG D TGL+TDSL +AGYPGA
Sbjct: 425 MDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLVDAGYPGA 484
Query: 497 ALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFL 556
LG AVCG+A A +SKD+L WFRS+TA +KWGGAKHHP+ KD+ G+MHPRSSF AFL
Sbjct: 485 ISLGDAVCGVAAAEFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDDAGRMHPRSSFTAFL 544
Query: 557 EVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSV 616
EV K+RS PWE+SEI+AIHSL+++MR+SF + + GN + +EL+S
Sbjct: 545 EVAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSGN-----GVARDANELTSF 595
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL DE+V EES+ A+
Sbjct: 596 VCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLADEIVQEESRAAL 655
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQH----SVVYILVNACTSRDYKNNVKGVCFVGQ 732
E+L+C+AL GEE+K+V LKLRKF Q H S V +LVN+CTSRDY N+ GVCFVGQ
Sbjct: 656 ESLLCKALQGEEEKSVMLKLRKFG-QNNHPDYSSDVCVLVNSCTSRDYTENIIGVCFVGQ 714
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
DIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDENACCSEWNAAMEK+TGW +HEV
Sbjct: 715 DITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHEV 774
Query: 793 IGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVALTA 851
IGKMLP E+FG FC++K QD LTKF+I LYQGI G E+ FFN++G+++E +LTA
Sbjct: 775 IGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFFNKEGKYIEASLTA 834
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++ T+ EGKVI CF F+QI+ + + L L++ + EL Y+RQE+KNPLNGIR
Sbjct: 835 NKSTNIEGKVIRCFFFLQII--NKESGLSCPELKES--AQSLNELTYVRQEIKNPLNGIR 890
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGR 956
F HKLLESS IS +QRQ+LETSDACE+QI TII+ DL+ IEEG+
Sbjct: 891 FAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEEGK 935
>gi|226234981|dbj|BAH47471.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/946 (67%), Positives = 766/946 (80%), Gaps = 29/946 (3%)
Query: 24 SSDAKMKPVNKGK---TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
S+ + MKP+ K + Y+ DAGL A+F+QSV SGKSFNYS+SVISP V +E I
Sbjct: 8 SAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNHVSDEHI 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLE---MLDLRSRSEDFELN---GL 134
TAYLS IQRGGL+QPFGC++AVEEP+FRI+G SENC+E +L L S S+ E N GL
Sbjct: 68 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL 127
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IGIDARTLF+P SGASL+KAA+ EISLLNP+LVHS ++ +KPFYAILHRID GIVIDL
Sbjct: 128 IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHS--KTTQKPFYAILHRIDAGIVIDL 185
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
E +KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y
Sbjct: 186 EAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVY 245
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV ++Q
Sbjct: 246 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKIVQ 305
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSP 374
S+ELK+PLCLVNSTLR+PH CH QYM NMGSIASL +A+++ KDS KLWGLVV HH SP
Sbjct: 306 SEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVGHHCSP 365
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
RY+PFPLRYACEFL+QAF LQL MELQ+ QLAEK +RTQ LLCDMLLRD +IVTQS
Sbjct: 366 RYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQS 425
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGY 493
P IMDLVKCDGAALYY G+CWLVGVTP+E Q+KD+ WL+ NHG D TGL+TDSL + GY
Sbjct: 426 PGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDVGY 485
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA G A+CG+A A I+SKDFL WFRS+TA +KWGGAKHHP++KD+ G+MHPRSSFK
Sbjct: 486 PGAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFK 545
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEV K+RS PWE+SEI+AIHSL+++MR+SF + + N + + +EL
Sbjct: 546 AFLEVAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSANVVE-----RDANEL 596
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+S CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL +E+V EES+
Sbjct: 597 TSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESR 656
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQ---HSVVYILVNACTSRDYKNNVKGVCFV 730
A+E+L+C+AL GEE+KNV LKLRKF S V++LVN+CTSRDY + GVCFV
Sbjct: 657 AALESLMCKALQGEEEKNVMLKLRKFGHNNHPYYSSGVFVLVNSCTSRDYTEKIIGVCFV 716
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQDIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDENACCSEWNAAMEK+TGW +H
Sbjct: 717 GQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKH 776
Query: 791 EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVAL 849
EVIGKMLP E+FG FC++K QD LTKF+I LYQGI E+ GFFN++G+++E +L
Sbjct: 777 EVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLLGFFNKEGKYIEASL 836
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
TA++ T+ EGKVIGCF F+QI+ D L GL++ + EL Y++QE+KNPL+G
Sbjct: 837 TANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES--AQSLNELTYMKQEIKNPLSG 892
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
IRF HKLLESS ISE QR++LETSDACE+QI TII+G DL+ IEEG
Sbjct: 893 IRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGADLKSIEEG 938
>gi|240255991|ref|NP_193547.4| phytochrome E [Arabidopsis thaliana]
gi|332278136|sp|P42498.2|PHYE_ARATH RecName: Full=Phytochrome E
gi|332658600|gb|AEE84000.1| phytochrome E [Arabidopsis thaliana]
Length = 1112
Score = 1328 bits (3438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/945 (68%), Positives = 766/945 (81%), Gaps = 29/945 (3%)
Query: 24 SSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAY 83
S+ + MKP K+ Y+ DA L A+F QS+ +GKSFNYS+SVISPP VP+E ITAY
Sbjct: 8 SAASNMKP-QPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNHVPDEHITAY 66
Query: 84 LSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDL-----RSRSEDFE-LNGLIGI 137
LS IQRGGL+QPFGC++AVEEP+FRI+G S+N + L L S S +F+ + GLIGI
Sbjct: 67 LSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLLSLPSTSHSGEFDKVKGLIGI 126
Query: 138 DARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPS 197
DARTLFTP SGASL+KAA+ EISLLNP+LVH SR+ +KPFYAILHRID GIV+DLEP+
Sbjct: 127 DARTLFTPSSGASLSKAASFTEISLLNPVLVH--SRTTQKPFYAILHRIDAGIVMDLEPA 184
Query: 198 KSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFH 257
KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y FH
Sbjct: 185 KSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFH 244
Query: 258 DDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKE 317
+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+QS+E
Sbjct: 245 EDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEE 304
Query: 318 LKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYI 377
LK+PLCLVNSTLR+PHGCH QYM NMGS+ASL +A+++ KDS KLWGLVV HH SPRY+
Sbjct: 305 LKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSSKLWGLVVGHHCSPRYV 364
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QLAEK +RTQ LLCDMLLRD +IVTQSP I
Sbjct: 365 PFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSPGI 424
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGYPGA 496
MDLVKCDGAALYY G+CWLVGVTP ESQ+KD+ WL+ NHG D TGL+TDSL +AGYPGA
Sbjct: 425 MDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLVDAGYPGA 484
Query: 497 ALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFL 556
LG AVCG+A A +SKD+L WFRS+TA +KWGGAKHHP+ KD+ G+MHPRSSF AFL
Sbjct: 485 ISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDDAGRMHPRSSFTAFL 544
Query: 557 EVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSV 616
EV K+RS PWE+SEI+AIHSL+++MR+SF + + GN + +EL+S
Sbjct: 545 EVAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSGN-----GVARDANELTSF 595
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL DE+V EES+ A+
Sbjct: 596 VCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLADEIVQEESRAAL 655
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQH----SVVYILVNACTSRDYKNNVKGVCFVGQ 732
E+L+C+AL GEE+K+V LKLRKF Q H S V +LVN+CTSRDY N+ GVCFVGQ
Sbjct: 656 ESLLCKALQGEEEKSVMLKLRKFG-QNNHPDYSSDVCVLVNSCTSRDYTENIIGVCFVGQ 714
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
DIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDENACCSEWNAAMEK+TGW +HEV
Sbjct: 715 DITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHEV 774
Query: 793 IGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVALTA 851
IGKMLP E+FG FC++K QD LTKF+I LYQGI G E+ FFN++G+++E +LTA
Sbjct: 775 IGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFFNKEGKYIEASLTA 834
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++ T+ EGKVI CF F+QI+ + + L L++ + EL Y+RQE+KNPLNGIR
Sbjct: 835 NKSTNIEGKVIRCFFFLQII--NKESGLSCPELKES--AQSLNELTYVRQEIKNPLNGIR 890
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGR 956
F HKLLESS IS +QRQ+LETSDACE+QI TII+ DL+ IEEG+
Sbjct: 891 FAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEEGK 935
>gi|226234969|dbj|BAH47474.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1327 bits (3434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/946 (67%), Positives = 765/946 (80%), Gaps = 29/946 (3%)
Query: 24 SSDAKMKPVNKGK---TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
S+ + MKP+ K + Y+ DAGL A+F+QSV SGKSFNYS+SVISP V +E I
Sbjct: 8 SAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNHVSDEHI 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLE---MLDLRSRSEDFELN---GL 134
TAYLS IQRGGL+QPFGC++AVEEP+FRI+G SENC+E +L L S S+ E N GL
Sbjct: 68 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL 127
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IGIDARTLF+P SGASL+KAA+ EISLLNP+LVHS ++ +KPFYAILHRID GIVIDL
Sbjct: 128 IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHS--KTTQKPFYAILHRIDAGIVIDL 185
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
E +KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y
Sbjct: 186 EAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVY 245
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV ++Q
Sbjct: 246 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKIVQ 305
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSP 374
S+ELK+PLCLVNSTLR+PH CH QYM NMGSIASL +A+++ KDS KLWGLVV HH SP
Sbjct: 306 SEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVGHHCSP 365
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
RY+PFPLRYACEFL+QAF LQL MELQ+ QLAEK +RTQ LLCDMLLRD +IVTQS
Sbjct: 366 RYVPFPLRYACEFLIQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQS 425
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGY 493
P IMDLVKCDGAALYY G+CWLVGVTP+E Q+KD+ WL+ NHG D TGL+TDSL + GY
Sbjct: 426 PGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDVGY 485
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA G A+CG+A A I+SKDFL WFRS+TA +KWGGAKHHP++KD+ G+MHPRSSFK
Sbjct: 486 PGAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFK 545
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEV K+RS PWE+SEI+AIHSL+++MR+SF + + N + + +EL
Sbjct: 546 AFLEVAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSANVVE-----RDANEL 596
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+S CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL +E+V EES+
Sbjct: 597 TSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESR 656
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQ---HSVVYILVNACTSRDYKNNVKGVCFV 730
A+E+L+C+AL GEE+KNV LKLRKF S V++LVN+CTSRDY + GVCFV
Sbjct: 657 AALESLMCKALQGEEEKNVMLKLRKFGHNNHPYYSSGVFVLVNSCTSRDYTEKIIGVCFV 716
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQDIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDENACCSEWNAAMEK+TGW +H
Sbjct: 717 GQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKH 776
Query: 791 EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVAL 849
EVIGKMLP E+FG FC++K QD LTKF+I LYQGI E+ GFFN++G+++ +L
Sbjct: 777 EVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLLGFFNKEGKYIVASL 836
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
TA++ T+ EGKVIGCF F+QI+ D L GL++ + EL Y++QE+KNPL+G
Sbjct: 837 TANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES--AQSLNELTYMKQEIKNPLSG 892
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
IRF HKLLESS ISE QR++LETSDACE+QI TII+G DL+ IEEG
Sbjct: 893 IRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEG 938
>gi|226234967|dbj|BAH47473.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1326 bits (3431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/946 (67%), Positives = 765/946 (80%), Gaps = 29/946 (3%)
Query: 24 SSDAKMKPVNKGK---TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
S+ + MKP+ K + Y+ DAGL A+F+QSV SGKSFNYS+SVISP V +E I
Sbjct: 8 SAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNHVSDEHI 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLE---MLDLRSRSEDFELN---GL 134
TAYLS IQRGGL+QPFGC++AVEEP+FRI+G SENC+E +L L S S+ E N GL
Sbjct: 68 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL 127
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IGIDARTLF+P SGASL+KAA+ EISLLNP+LVHS ++ +KPFYAILHRID GIVIDL
Sbjct: 128 IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHS--KTTQKPFYAILHRIDAGIVIDL 185
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
E +KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y
Sbjct: 186 EAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVY 245
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV ++Q
Sbjct: 246 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKIVQ 305
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSP 374
S+ELK+PLCLVNSTLR+PH CH QYM NMGSIASL +A+++ KDS KLWGLVV HH SP
Sbjct: 306 SEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVGHHCSP 365
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
RY+PFPLRYACEFL+QAF LQL MELQ+ QLAEK +RTQ LLCDMLLRD +IVTQS
Sbjct: 366 RYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQS 425
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGY 493
P IMDLVKCDGAALYY G+CWLVGVTP+E Q+KD+ WL+ NHG D TGL+TDSL + GY
Sbjct: 426 PGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDVGY 485
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA G A+CG+A A I+SKDFL WFRS+TA +KWGGAKHHP++KD+ G+MHPRSSFK
Sbjct: 486 PGAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFK 545
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEV K+RS PWE+SEI+AIHSL+++MR+SF + + N + + +EL
Sbjct: 546 AFLEVAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSANVVE-----RDANEL 596
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+S CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL +E+V EES+
Sbjct: 597 TSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESR 656
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQ---HSVVYILVNACTSRDYKNNVKGVCFV 730
A+E+L+C+AL GEE+KNV LKLRKF S V++LVN+CTSRDY + GVCFV
Sbjct: 657 AALESLMCKALQGEEEKNVMLKLRKFGHNNHPYYSSGVFVLVNSCTSRDYTEKIIGVCFV 716
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQDIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDENACCSEWNAAMEK+TGW +H
Sbjct: 717 GQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKH 776
Query: 791 EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVAL 849
EVIGKMLP E+FG FC++K QD LTKF+I LYQGI E+ GFFN++G+++ +L
Sbjct: 777 EVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLLGFFNKEGKYIVASL 836
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
TA++ T+ EGKVIGCF F+QI+ D L GL++ + EL Y++QE+KNPL+G
Sbjct: 837 TANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES--AQSLNELTYMKQEIKNPLSG 892
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
IRF HKLLESS ISE QR++LETSDACE+QI TII+G DL+ IEEG
Sbjct: 893 IRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEG 938
>gi|226234971|dbj|BAH47475.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1323 bits (3425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/946 (67%), Positives = 767/946 (81%), Gaps = 29/946 (3%)
Query: 24 SSDAKMKPVNKGK---TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
S+ + MKP+ K + Y+ DAGL A+F+QSV SGKSFNYS+SVISP V +E I
Sbjct: 8 SAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNHVSDEHI 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLE---MLDLRSRSEDFELN---GL 134
TAYLS IQRGGL+QPFGC++AVEEP+FRI+G SENC+E +L L S S+ E N GL
Sbjct: 68 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL 127
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IGIDARTLF+P SGASL+KAA+ EISLLNP+LVHS ++ +KPFYAILHRID GIVIDL
Sbjct: 128 IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHS--KTTQKPFYAILHRIDAGIVIDL 185
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
E +KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y
Sbjct: 186 EAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVY 245
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+Q
Sbjct: 246 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQ 305
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSP 374
S+ELK+PLCLVNSTLR+PH CH QYM NMGSIASL +A+++ KDS KLWGLVV HH SP
Sbjct: 306 SEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVGHHCSP 365
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
RY+PFPLRYACEFL+QAF LQL MELQ+ QLAEK +RTQ LLCDMLLRD +IVTQS
Sbjct: 366 RYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQS 425
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGY 493
P IMDLVKCDGAALYY G+CWLVGVTP+E Q+KD+ WL+ NHG D TGL+TDSL +AGY
Sbjct: 426 PGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGY 485
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA G A+CG+A A I+SKD+L WFRS+TA +KWGGAKHHP++KD+ G+MHPRSSFK
Sbjct: 486 PGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFK 545
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLE+ K+RS PWE+SEI+AIHSL+++MR+SF + + N + + +EL
Sbjct: 546 AFLEIAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSANVVE-----RDANEL 596
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+S CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL +E+V EES+
Sbjct: 597 TSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESR 656
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQ---HSVVYILVNACTSRDYKNNVKGVCFV 730
A+E+L+C+AL GEE+KNV LKLRKF S V +LVN+CTSRDY + GVCFV
Sbjct: 657 AALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIGVCFV 716
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQDIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDE+ACCSEWNAAMEK+TGW +H
Sbjct: 717 GQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKH 776
Query: 791 EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVAL 849
EVIGKMLP E+FG FC++K QD LTKF+I LYQGI E+ GFFN++G+++E +L
Sbjct: 777 EVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEASL 836
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
TA++ T+ EGKVIGCF F+QI+ D L GL++ + EL+Y++QE+KNPL+G
Sbjct: 837 TANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES--AQSLNELSYMKQEIKNPLSG 892
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
IRF HKLLESS ISE QR++LETSDACE+QI TII+G DL+ IEEG
Sbjct: 893 IRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEG 938
>gi|226234973|dbj|BAH47476.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1322 bits (3421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/946 (67%), Positives = 766/946 (80%), Gaps = 29/946 (3%)
Query: 24 SSDAKMKPVNKGK---TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
S+ + MKP+ K + Y+ DAGL A+F+QSV SGKSFNYS+SVISP V +E I
Sbjct: 8 SAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNHVSDEHI 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML-----DLRSRSEDFE-LNGL 134
TAYLS IQRGGL+QPFGC++AVEEP+FRI+G SENC+E L D S+ +F+ + GL
Sbjct: 68 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFDNVKGL 127
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IGIDARTLF+P SGASL+KAA+ EISLLNP+LVHS ++ +KPFYAILHRID GIVIDL
Sbjct: 128 IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHS--KTTQKPFYAILHRIDAGIVIDL 185
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
E +KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y
Sbjct: 186 EAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVY 245
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+Q
Sbjct: 246 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQ 305
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSP 374
S+ELK+PLCLVNSTLR+PH CH QYM NMGSIASL +A+++ KDS KLWGLVV HH SP
Sbjct: 306 SEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVGHHCSP 365
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
RY+PFPLRYACEFL+QAF LQL MELQ+ QLAEK +RTQ LLCDMLLRD +IVTQS
Sbjct: 366 RYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQS 425
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGY 493
P IMDLVKCDGAALYY G+CWLVGVTP+E Q+KD+ WL+ NHG D TGL+TDSL +AGY
Sbjct: 426 PGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGY 485
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA G A+CG+A A I+SKD+L WFRS+TA +KWGGAKHHP++KD+ G+MHPRSSFK
Sbjct: 486 PGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFK 545
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLE+ K+RS PWE+SEI+AIHSL+++MR+SF + + N + + +EL
Sbjct: 546 AFLEIAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSANVVE-----RDANEL 596
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+S CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL +E+V EES+
Sbjct: 597 TSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESR 656
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQ---HSVVYILVNACTSRDYKNNVKGVCFV 730
A+E+L+C+AL GEE+KNV LKLRKF S V +LVN+CTSRDY + GVCFV
Sbjct: 657 AALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIGVCFV 716
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQDIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDE+ACCSEWNAAMEK+TGW +H
Sbjct: 717 GQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKH 776
Query: 791 EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVAL 849
EVIGKMLP E+FG FC++K QD LTKF+I LYQGI E+ GFFN++G+++E +L
Sbjct: 777 EVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEASL 836
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
TA++ T+ EGKVIGCF F+QI+ D L GL++ + EL Y++QE+KNPL+G
Sbjct: 837 TANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES--AQSLNELTYMKQEIKNPLSG 892
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
IRF HKLLESS ISE QR++LETSDACE+QI TII+G DL+ IEEG
Sbjct: 893 IRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEG 938
>gi|226235029|dbj|BAH47480.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1321 bits (3420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/946 (67%), Positives = 766/946 (80%), Gaps = 29/946 (3%)
Query: 24 SSDAKMKPVNKGK---TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
S+ + MKP+ K + Y+ DAGL A+F+QSV SGKSFNYS+SVISP V +E I
Sbjct: 8 SAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNHVSDEHI 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLE---MLDLRSRSEDFELN---GL 134
TAYLS IQRGGL+QPFGC++AVEEP+FRI+G SENC+E +L L S S+ E N GL
Sbjct: 68 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL 127
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IGIDARTLF+P SGASL+KAA+ EISLLNP+LVHS ++ +KPFYAILHRID GIVIDL
Sbjct: 128 IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHS--KTTQKPFYAILHRIDAGIVIDL 185
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
E +KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y
Sbjct: 186 EAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVY 245
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+Q
Sbjct: 246 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQ 305
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSP 374
S+ELK+PLCLVNSTLR+PH CH QYM NMGSIASL +A+++ KDS KLWGLVV HH SP
Sbjct: 306 SEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVGHHCSP 365
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
RY+PFPLRYACEFL+QAF LQL MELQ+ QLAEK +RTQ LLCDMLLRD +IVTQS
Sbjct: 366 RYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQS 425
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGY 493
P IMDLVKCDGAALYY G+CWLVGVTP+E Q+KD+ WL+ NHG D TGL+TDSL +AGY
Sbjct: 426 PGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGY 485
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA G A+CG+A A I+SKD+L WFRS+TA +KWGGAKHHP++KD+ G+MHPRSSFK
Sbjct: 486 PGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFK 545
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLE+ K+RS PWE+SEI+AIHSL+++MR+SF + + N + + +EL
Sbjct: 546 AFLEIAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSANVVE-----RDANEL 596
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+S CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL +E+V EES+
Sbjct: 597 TSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESR 656
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQ---HSVVYILVNACTSRDYKNNVKGVCFV 730
A+E+L+C+AL GEE+KNV LKLRKF S V +LVN+CTSRDY + GVCFV
Sbjct: 657 AALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIGVCFV 716
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQDIT EK + D+F+RLQGDY+ I+QS+NPLIPPIFASDE+ACCSEWNAAMEK+TGW +H
Sbjct: 717 GQDITSEKEITDRFMRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKH 776
Query: 791 EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVAL 849
EVIGKMLP E+FG FC++K QD LTKF+I LYQGI E+ GFFN++G+++E +L
Sbjct: 777 EVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEASL 836
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
TA++ T+ EGKVIGCF F+QI+ D L GL++ + EL Y++QE+KNPL+G
Sbjct: 837 TANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES--AQSLNELTYMKQEIKNPLSG 892
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
IRF HKLLESS ISE QR++LETSDACE+QI TII+G DL+ IEEG
Sbjct: 893 IRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEG 938
>gi|226235031|dbj|BAH47481.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1320 bits (3417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/946 (67%), Positives = 766/946 (80%), Gaps = 29/946 (3%)
Query: 24 SSDAKMKPVNKGK---TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
S+ + MKP+ K + Y+ DAGL A+F+QSV SGKSFNYS+SVISP V +E I
Sbjct: 8 SAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNHVSDEHI 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLE---MLDLRSRSEDFELN---GL 134
TAYLS IQRGGL+QPFGC++AVEEP+FRI+G SENC+E +L L S S+ E N GL
Sbjct: 68 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL 127
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IGIDARTLF+P SGASL+KAA+ E SLLNP+LVHS ++ +KPFYAILHRID GIVIDL
Sbjct: 128 IGIDARTLFSPSSGASLSKAASFTENSLLNPVLVHS--KTTQKPFYAILHRIDAGIVIDL 185
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
E +KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y
Sbjct: 186 EAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVY 245
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+Q
Sbjct: 246 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQ 305
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSP 374
S+ELK+PLCLVNSTLR+PH CH QYM NMGSIASL +A+++ KDS KLWGLVV HH SP
Sbjct: 306 SEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVGHHCSP 365
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
RY+PFPLRYACEFL+QAF LQL MELQ+ QLAEK +RTQ LLCDMLLRD +IVTQS
Sbjct: 366 RYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQS 425
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGY 493
P IMDLVKCDGAALYY G+CWLVGVTP+E Q+KD+ WL+ NHG D TGL+TDSL +AGY
Sbjct: 426 PGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGY 485
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA G A+CG+A A I+SKD+L WFRS+TA +KWGGAKHHP++KD+ G+MHPRSSFK
Sbjct: 486 PGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFK 545
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLE+ K+RS PWE+SEI+AIHSL+++MR+SF + + N + + +EL
Sbjct: 546 AFLEIAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSANVVE-----RDANEL 596
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+S CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL +E+V EES+
Sbjct: 597 TSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESR 656
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQ---HSVVYILVNACTSRDYKNNVKGVCFV 730
A+E+L+C+AL GEE+KNV LKLRKF S V +LVN+CTSRDY + GVCFV
Sbjct: 657 AALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIGVCFV 716
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQDIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDE+ACCSEWNAAMEK+TGW +H
Sbjct: 717 GQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKH 776
Query: 791 EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVAL 849
EVIGKMLP E+FG FC++K QD LTKF+I LYQGI E+ GFFN++G+++E +L
Sbjct: 777 EVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEASL 836
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
TA++ T+ EGKVIGCF F+QI+ D L GL++ + EL+Y++QE+KNPL+G
Sbjct: 837 TANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES--AQSLNELSYMKQEIKNPLSG 892
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
IRF HKLLESS ISE QR++LETSDACE+QI TII+G DL+ IEEG
Sbjct: 893 IRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEG 938
>gi|226234977|dbj|BAH47478.1| phytochrome E [Cardamine nipponica]
gi|226235027|dbj|BAH47479.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1320 bits (3416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/946 (67%), Positives = 765/946 (80%), Gaps = 29/946 (3%)
Query: 24 SSDAKMKPVNKGK---TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
S+ + MKP+ K + Y+ DAGL A+F+QSV SGKSFNYS+SVISP V +E I
Sbjct: 8 SAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNHVSDEHI 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLE---MLDLRSRSEDFELN---GL 134
TAYLS IQRGGL+QPFGC++AVEEP+FRI+G SENC+E +L L S S+ E N GL
Sbjct: 68 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL 127
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IGIDARTLF+P SGASL+KAA+ EISLLNP+LVHS ++ +KPFYAILHRID GIVIDL
Sbjct: 128 IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHS--KTTQKPFYAILHRIDAGIVIDL 185
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
E +KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y
Sbjct: 186 EAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVY 245
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A V V+Q
Sbjct: 246 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATSVKVVQ 305
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSP 374
S+ELK+PLCLVNSTLR+PH CH QYM NMGSIASL +A+++ KDS KLWGLVV HH SP
Sbjct: 306 SEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVGHHCSP 365
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
RY+PFPLRYACEFL+QAF LQL MELQ+ QLAEK +RTQ LLCDMLLRD +IVTQS
Sbjct: 366 RYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQS 425
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGY 493
P IMDLVKCDGAALYY G+CWLVGVTP+E Q+KD+ WL+ NHG D TGL+TDSL +AGY
Sbjct: 426 PGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGY 485
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA G A+CG+A A I+SKD+L WFRS+TA +KWGGAKHHP++KD+ G+MHPRSSFK
Sbjct: 486 PGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFK 545
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLE+ K+RS PWE+SEI+AIHSL+++MR+SF + + N + + +EL
Sbjct: 546 AFLEIAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSANVVE-----RDANEL 596
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+S CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL +E+V EES+
Sbjct: 597 TSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESR 656
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQ---HSVVYILVNACTSRDYKNNVKGVCFV 730
A+E+L+C+AL GEE+KNV LKLRKF S V +LVN+CTSRDY + GVCFV
Sbjct: 657 AALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIGVCFV 716
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQDIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDE+ACCSEWNAAMEK+TGW +H
Sbjct: 717 GQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKH 776
Query: 791 EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVAL 849
EVIGKMLP E+FG FC++K QD LTKF+I LYQGI E+ GFFN++G+++E +L
Sbjct: 777 EVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEASL 836
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
TA++ T+ EGKVIGCF F+QI+ D L GL++ + EL Y++QE+KNPL+G
Sbjct: 837 TANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES--AQSLNELTYMKQEIKNPLSG 892
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
IRF HKLLESS ISE QR++LETSDACE+QI TII+G DL+ IEEG
Sbjct: 893 IRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEG 938
>gi|226234975|dbj|BAH47477.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1320 bits (3415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/946 (67%), Positives = 765/946 (80%), Gaps = 29/946 (3%)
Query: 24 SSDAKMKPVNKGK---TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
S+ + MKP+ K + Y+ DAGL A+F+QSV SGKSFNYS+SVISP V +E I
Sbjct: 8 SAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNHVSDEHI 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLE---MLDLRSRSEDFELN---GL 134
TAYLS IQRGGL+QPFGC++AVEEP+FRI+G SENC+E +L L S S+ E N GL
Sbjct: 68 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL 127
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IGIDARTLF+P SGASL+KAA+ EISLLNP+LVHS ++ +KPFYAILHRID GIVIDL
Sbjct: 128 IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHS--KTTQKPFYAILHRIDAGIVIDL 185
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
E +KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y
Sbjct: 186 EAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVY 245
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A V V+Q
Sbjct: 246 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATSVKVVQ 305
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSP 374
S+ELK+PLCLVNSTLR+PH CH QYM NMGSIASL +A+++ KDS KLWGLVV HH SP
Sbjct: 306 SEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVGHHCSP 365
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
RY+PFPLRYACEFL+QAF LQL MELQ+ QLAEK +RTQ LLCDMLLRD +IVTQS
Sbjct: 366 RYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQS 425
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGY 493
P IMDLVKCDGAALYY G+CWLVGVTP+E Q+KD+ WL+ NHG D TGL+TDSL +AGY
Sbjct: 426 PGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGY 485
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA G A+CG+A A I+SKD+L WFRS+TA +KWGGAKHHP++KD+ G+MHPRSSFK
Sbjct: 486 PGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFK 545
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLE+ K+RS PWE+SEI+AIHSL+++MR+SF + + N + + +EL
Sbjct: 546 AFLEIAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSANVVE-----RDANEL 596
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+S CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL +E+V EES+
Sbjct: 597 TSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESR 656
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQ---HSVVYILVNACTSRDYKNNVKGVCFV 730
A+E+L+C+AL GEE+KNV LKLRKF S V +LVN+CTSRDY + GVCFV
Sbjct: 657 AALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIGVCFV 716
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQDIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDE+ACCSEWNAAMEK+TGW +H
Sbjct: 717 GQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKH 776
Query: 791 EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVAL 849
EVIGKMLP E+FG FC++K QD LTKF+I LYQGI E+ GFFN++G+++E +L
Sbjct: 777 EVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEASL 836
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
TA++ T+ EGKVIGCF F+QI+ D L GL++ + EL Y++QE+KNPL+G
Sbjct: 837 TANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES--AQSLNELTYMKQEIKNPLSG 892
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
IRF HKLLESS ISE QR++LETSDACE+QI TII+G DL+ IEEG
Sbjct: 893 IRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDLKSIEEG 938
>gi|226235033|dbj|BAH47482.1| phytochrome E [Cardamine resedifolia]
Length = 1116
Score = 1315 bits (3403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/946 (67%), Positives = 762/946 (80%), Gaps = 29/946 (3%)
Query: 24 SSDAKMKPVNKGK---TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQI 80
S+ + MKP+ K + Y+ DAGL A+F+QSV SGKSFNYS+SVISP V +E I
Sbjct: 8 SAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVISPHNHVSDEHI 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLE---MLDLRSRSEDFELN---GL 134
TAYLS IQRGGL+QPFGC++AVEEP+FRI+G SENC+E +L L S S+ E N GL
Sbjct: 68 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL 127
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IGIDARTLF+P SGASL+KAA+ EISLLNP+LVHS ++ +KPFYAILHRID G VIDL
Sbjct: 128 IGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHS--KTTQKPFYAILHRIDAGTVIDL 185
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
E +KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCD VVEDVQ+LTGYDRVM+Y
Sbjct: 186 EAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDAVVEDVQRLTGYDRVMVY 245
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+Q
Sbjct: 246 QFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQ 305
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSP 374
S+ELK+PLCLVNSTLR+PH CH QYM NMGSIASL +A+++ KDS KLWGLVV HH SP
Sbjct: 306 SEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSSKLWGLVVGHHCSP 365
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
RY+PFPLRYACEFL+QAF LQL MELQ+ QLAEK +RTQ LLCDMLLRD +IVTQS
Sbjct: 366 RYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQS 425
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGY 493
P IMDLVKCDGAALYY G+CWLVGVTP+E Q+KD+ WL+ NHG D TGL+TDSL +AGY
Sbjct: 426 PGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGY 485
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA G A+CG+A A I+SKD+L WFRS+TA +KWGGAKHHP++KD+ G+MHPRSSFK
Sbjct: 486 PGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFK 545
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEV K+RS PWE+SEI+AIHSL+++MR+SF + + N + + +EL
Sbjct: 546 AFLEVAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSANVVE-----RDANEL 596
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+S CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL +E+V EES+
Sbjct: 597 TSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESR 656
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQ---HSVVYILVNACTSRDYKNNVKGVCFV 730
A+E+ +C+AL GEE+KNV LKLRKF S V +LVN+CTSRDY + GVCFV
Sbjct: 657 AALESFMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVNSCTSRDYTEKIIGVCFV 716
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQDIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDE+ACCSEWNAAMEK+TGW +H
Sbjct: 717 GQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHACCSEWNAAMEKLTGWSKH 776
Query: 791 EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVAL 849
EVIGKMLP E+FG FC++K QD LTKF+I LYQGI E+ GFFN++G+++E +L
Sbjct: 777 EVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIASHDIPESSLVGFFNKEGKYIEASL 836
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
TA++ T+ EGKVIGCF F+QI+ D L GL++ + L YI+QE+KNPL+G
Sbjct: 837 TANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES--AQSLNGLTYIKQEIKNPLSG 892
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
IRF HKLLESS ISE QR++LE+SDACE+QI TII+G DL+ IEEG
Sbjct: 893 IRFAHKLLESSEISETQRKFLESSDACEKQITTIIEGTDLKSIEEG 938
>gi|357450589|ref|XP_003595571.1| Phytochrome E [Medicago truncatula]
gi|87241383|gb|ABD33241.1| Bacteriophytochrome [Medicago truncatula]
gi|355484619|gb|AES65822.1| Phytochrome E [Medicago truncatula]
Length = 1122
Score = 1303 bits (3371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/933 (65%), Positives = 754/933 (80%), Gaps = 8/933 (0%)
Query: 24 SSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAY 83
S+++KM + + + Y DA LLAEFEQS GKSF YS++++ PP V EE++ Y
Sbjct: 17 SAESKMNTNKETEKTLAQYGVDAELLAEFEQSRVYGKSFEYSKTILDPPRLVSEEKMITY 76
Query: 84 LSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML-DLRSRSEDFELNGLIGIDARTL 142
LS+IQRGG IQPFGC++ +EE TFRIIGYSENC ++L D+ S GLIG+DA TL
Sbjct: 77 LSRIQRGGFIQPFGCLVVIEESTFRIIGYSENCFQLLGDIGSE----HFMGLIGVDATTL 132
Query: 143 FTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDP 202
FTPPSG+SL KA ASREIS LNPI V +R+ EKPFYAILHRIDVG++IDLEP++S P
Sbjct: 133 FTPPSGSSLVKAVASREISRLNPIWV--RARTTEKPFYAILHRIDVGVLIDLEPARSSGP 190
Query: 203 ALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHG 262
ALSL+G+ QSQK+AVSAISRLQ+ DI LLCDTVVE+VQKLTGY+RVM+Y FH+DDHG
Sbjct: 191 ALSLSGSFQSQKMAVSAISRLQSCRREDISLLCDTVVEEVQKLTGYERVMIYKFHEDDHG 250
Query: 263 EVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPL 322
EVVSE RRSDLE YLG+H+P+ DIPQAARFLFKQNRVR+I DCHA PV VIQS+ELK+PL
Sbjct: 251 EVVSETRRSDLESYLGLHYPSIDIPQAARFLFKQNRVRLIYDCHAKPVKVIQSRELKKPL 310
Query: 323 CLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLR 382
CLVNSTLRSPH CH QYM NMGSIASLVMAV+IN KD+ +LWGL+VCHHTSP ++ FP+R
Sbjct: 311 CLVNSTLRSPHDCHKQYMANMGSIASLVMAVVINEKDTTRLWGLLVCHHTSPHHVSFPVR 370
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
+ACEF++ F +QLYME+Q+A Q+ EK IL+TQ +LCDMLLRDAPF IVTQSPSIMDLVK
Sbjct: 371 HACEFVMHTFGMQLYMEIQLASQMEEKRILKTQTMLCDMLLRDAPFGIVTQSPSIMDLVK 430
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAALYY CWL+G+TPT+ Q+KDIA WLL+N+ D TGL+T+SL +AGYPGA LLG A
Sbjct: 431 CDGAALYYDENCWLLGITPTKLQVKDIAEWLLSNYSDSTGLTTESLVDAGYPGATLLGDA 490
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA+ARI + LFWFRSHTAKE++WGGAKHHP KD+GGKM+PR+SFKAFLEV+K++
Sbjct: 491 VCGMASARINQRHILFWFRSHTAKEIQWGGAKHHPTDKDDGGKMNPRTSFKAFLEVLKSK 550
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVR 622
S PWE+SEINAIHSLQ++M+D FQ+ + K + +++ + + G E+SS+A EMVR
Sbjct: 551 SLPWEISEINAIHSLQLIMQDLFQDT-DNTCPKTLKDFEKSDALIGGSHEISSIALEMVR 609
Query: 623 LIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICR 682
LIETA PIFGVDS G INGWN K+AELTGLP SEAMGKSL +EVVH +S+ + N++ R
Sbjct: 610 LIETAAVPIFGVDSDGLINGWNVKIAELTGLPTSEAMGKSLENEVVHVDSRETLTNILRR 669
Query: 683 ALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMD 742
AL G+++KNVELK+ +F L ++ VVY+++++C SRDY N + GV FVGQDIT EKV++
Sbjct: 670 ALQGQDNKNVELKINRFVLHQEKEVVYLMISSCISRDYTNAIVGVGFVGQDITFEKVIVK 729
Query: 743 KFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF 802
KFI+L+GDY+AI+ S+NPLIPPIFASDENACCSEWN AME+VTGW + EVIGKML EIF
Sbjct: 730 KFIKLEGDYKAIMHSLNPLIPPIFASDENACCSEWNVAMERVTGWKKDEVIGKMLLGEIF 789
Query: 803 GNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVI 862
G+FCR+KGQD LT FMILLY GI+GQ +E PFGF++R G+F+E +T ++RTDA +I
Sbjct: 790 GSFCRLKGQDALTDFMILLYHGISGQDSEKSPFGFYDRNGKFIETYITTNKRTDASEDII 849
Query: 863 GCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSI 922
GCFCF+ ++ DL + + +K KELAYI QE+KNPLNGIRF HKLLE++ I
Sbjct: 850 GCFCFLHVVTEDLNQPFQGHRSKCRQRISKSKELAYILQEMKNPLNGIRFTHKLLENTGI 909
Query: 923 SENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
SENQ+Q L+TS+ACERQIM II+ +DL I EG
Sbjct: 910 SENQKQLLDTSEACERQIMAIIEDIDLGSINEG 942
>gi|189409278|gb|ACC60970.1| phytochrome B [Vitis riparia]
Length = 1129
Score = 1301 bits (3368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/963 (65%), Positives = 766/963 (79%), Gaps = 19/963 (1%)
Query: 5 GNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNY 64
GNR T + H +S+ ++ + I Y DA L A +EQS SGKSF+Y
Sbjct: 4 GNRGTQSH----HQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDY 59
Query: 65 SRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRS 124
S+SV + + VPE+QITAYLSKIQRGG IQPFGCMLAV+E TFR+I +SEN EML L
Sbjct: 60 SQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTP 119
Query: 125 RS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFY 180
+S E E+ L+G D RTLFTP S L KA +REI+LLNP+ +HS + KPFY
Sbjct: 120 QSVPSLEKPEIL-LVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSG--KPFY 176
Query: 181 AILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVE 240
AILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLC+TVVE
Sbjct: 177 AILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVE 236
Query: 241 DVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVR 300
+V++LTGYDRVM+Y FH+D+HGEVV+E +RSDLEPY+G+H+PA DIPQA+RFLF+QNRVR
Sbjct: 237 NVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVR 296
Query: 301 MICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS 360
MI DCHA PV+VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVIIN D
Sbjct: 297 MIVDCHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGSDE 356
Query: 361 --------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNIL 412
M+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL+EK++L
Sbjct: 357 EAIGGRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVL 416
Query: 413 RTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWW 472
RTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + GVTPTE+Q+KDIA W
Sbjct: 417 RTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYLGKYYPTGVTPTEAQIKDIAEW 476
Query: 473 LLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGG 532
LL NH D TGLSTDSLA+AGYPGAA LG AVCGMA A ITS+DFLFWFRSHTAKE+KWGG
Sbjct: 477 LLANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGG 536
Query: 533 AKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEN 592
AKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ + +
Sbjct: 537 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGS 596
Query: 593 DSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTG 652
+SK + Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVAELTG
Sbjct: 597 NSKAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTG 656
Query: 653 LPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILV 712
L EAMGKSL+ ++V++ES+ V+ L+ AL GEEDKNVE+KLR F+ Q+ V+++V
Sbjct: 657 LSVEEAMGKSLVHDLVYKESEETVDKLLHHALRGEEDKNVEIKLRTFDSQQHKKAVFVVV 716
Query: 713 NACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENA 772
NAC+SRDY NN+ GVCFVGQD+T +KV+MDKFI +QGDY+AI+ S NPLIPPIFASDEN
Sbjct: 717 NACSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENT 776
Query: 773 CCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTEN 832
CSEWN AMEK+TGW R ++IGKML EIFG+ CR+KG D LTKFMI+L+ I GQ T+
Sbjct: 777 VCSEWNTAMEKLTGWSRGDIIGKMLVGEIFGSSCRLKGPDALTKFMIVLHNAIGGQDTDK 836
Query: 833 FPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAK 892
FPF FF++ G++V+ LTA++R + EG++IG FCF+QI P+LQ AL+ Q ++ +A+
Sbjct: 837 FPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFAR 896
Query: 893 IKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCI 952
+KELAYI QE+KNPL+GIRF + LLE++ ++E+Q+Q+LETS ACE+Q+ II +DL I
Sbjct: 897 MKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSI 956
Query: 953 EEG 955
E+G
Sbjct: 957 EDG 959
>gi|189409279|gb|ACC60966.1| phytochrome B [Vitis vinifera]
Length = 1129
Score = 1299 bits (3362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/963 (64%), Positives = 765/963 (79%), Gaps = 19/963 (1%)
Query: 5 GNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNY 64
GNR T + H +S+ ++ + I Y DA L A +EQS SGKSF+Y
Sbjct: 4 GNRGTQSH----HQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDY 59
Query: 65 SRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRS 124
S+SV + + VPE+QITAYLSKIQRGG IQPFGCMLAV+E TFR+I +SEN EML L
Sbjct: 60 SQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTP 119
Query: 125 RS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFY 180
+S E E+ L+G D RTLFTP S L KA +REI+LLNP+ +HS + KPFY
Sbjct: 120 QSVPSLEKPEIL-LVGTDVRTLFTPSSAVLLEKAFRAREITLLNPVWIHSKNSG--KPFY 176
Query: 181 AILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVE 240
AILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLC+TVVE
Sbjct: 177 AILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVE 236
Query: 241 DVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVR 300
+V++LTGYDRVM+Y FH+D+HGEVV+E +RSDLEPY+G+H+PA DIPQA+RFLF+QNRVR
Sbjct: 237 NVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVR 296
Query: 301 MICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS 360
MI DCHA PV+VIQ + L QPLCLV STLR+PHGCH QYM NMGS ASL MAVIIN D
Sbjct: 297 MIVDCHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIINGSDE 356
Query: 361 --------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNIL 412
M+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL+EK++L
Sbjct: 357 EAIGGRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVL 416
Query: 413 RTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWW 472
RTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + GVTPTE+Q+KDIA W
Sbjct: 417 RTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPTGVTPTEAQIKDIAEW 476
Query: 473 LLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGG 532
LL NH D TGLSTDSLA+AGYPGAA LG AVCGMA A ITS+DFLFWFRSHTAKE+KWGG
Sbjct: 477 LLANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGG 536
Query: 533 AKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEN 592
AKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ + +
Sbjct: 537 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGS 596
Query: 593 DSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTG 652
+SK + Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVAELTG
Sbjct: 597 NSKAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTG 656
Query: 653 LPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILV 712
L EAMGKSL+ ++V++ES+ V+ L+ AL GEEDKNVE+KLR F+ Q+ V+++V
Sbjct: 657 LSVEEAMGKSLVHDLVYKESEETVDKLLHHALRGEEDKNVEIKLRTFDSQQHKKAVFVVV 716
Query: 713 NACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENA 772
NAC+SRDY NN+ GVCFVGQD+T +KV+MDKFI +QGDY+AI+ S NPLIPPIFASDEN
Sbjct: 717 NACSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENT 776
Query: 773 CCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTEN 832
CSEWN AMEK+TGW R ++IGK+L EIFG+ CR+KG D LTKFMI+L+ I GQ T+
Sbjct: 777 VCSEWNTAMEKLTGWSRGDIIGKILVGEIFGSSCRLKGPDALTKFMIVLHNAIGGQDTDK 836
Query: 833 FPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAK 892
FPF FF++ G++V+ LTA++R + EG++IG FCF+QI P+LQ AL+ Q ++ +A+
Sbjct: 837 FPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFAR 896
Query: 893 IKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCI 952
+KELAYI QE+KNPL+GIRF + LLE++ ++E+Q+Q+LETS ACE+Q+ II +DL I
Sbjct: 897 MKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSI 956
Query: 953 EEG 955
E+G
Sbjct: 957 EDG 959
>gi|225431962|ref|XP_002278263.1| PREDICTED: phytochrome B-like [Vitis vinifera]
Length = 1129
Score = 1297 bits (3357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/963 (64%), Positives = 764/963 (79%), Gaps = 19/963 (1%)
Query: 5 GNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNY 64
GNR T + H +S+ ++ + I Y DA L A +EQS SGKSF+Y
Sbjct: 4 GNRGTQSH----HQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDY 59
Query: 65 SRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRS 124
S+SV + + VPE+QITAYLSKIQRGG IQPFGCMLAV+E TFR+I +SEN EML L
Sbjct: 60 SQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTP 119
Query: 125 RS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFY 180
+S E E+ L+G D RTLFTP S L KA +REI+LLNP+ +HS + KPFY
Sbjct: 120 QSVPSLEKPEIL-LVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSG--KPFY 176
Query: 181 AILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVE 240
AILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLC+TVVE
Sbjct: 177 AILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVE 236
Query: 241 DVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVR 300
+V++LTGYDRVM+Y FH+D+HGEVV+E +RSDLEPY+G+H+PA DIPQA+RFLF+QNRVR
Sbjct: 237 NVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVR 296
Query: 301 MICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS 360
MI DCHA PV+VIQ + L QPLCLV STLR+PHGCH QYM NMGS ASL MAVIIN D
Sbjct: 297 MIVDCHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIINGNDE 356
Query: 361 --------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNIL 412
M+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL+EK++L
Sbjct: 357 EAIGGRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVL 416
Query: 413 RTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWW 472
RTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALY G+ + GVTPTE+Q+KDIA W
Sbjct: 417 RTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGKYYPTGVTPTEAQIKDIAEW 476
Query: 473 LLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGG 532
LL NH D TGLSTDSLA+AGYPGAA LG AVCGMA A ITS+DFLFWFRSHTAKE+KWGG
Sbjct: 477 LLANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGG 536
Query: 533 AKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEN 592
AKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ + +
Sbjct: 537 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGS 596
Query: 593 DSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTG 652
+SK + Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVAELTG
Sbjct: 597 NSKAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTG 656
Query: 653 LPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILV 712
L EAMGKSL+ ++V++ES+ V+ L+ AL GEEDKNVE+KLR F+ Q+ V+++V
Sbjct: 657 LSVEEAMGKSLVHDLVYKESEETVDKLLHHALQGEEDKNVEIKLRTFDSQQHKKAVFVVV 716
Query: 713 NACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENA 772
NAC+SRDY NN+ GVCFVGQD+T +KV+MDKFI +QGDY+AI+ S NPLIPPIFASDEN
Sbjct: 717 NACSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENT 776
Query: 773 CCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTEN 832
CSEWN AMEK+TGW R ++IGKML EIFG+ CR+KG D LTKFMI+L+ I GQ T+
Sbjct: 777 VCSEWNTAMEKLTGWSRGDIIGKMLVGEIFGSSCRLKGPDALTKFMIVLHNAIGGQDTDK 836
Query: 833 FPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAK 892
FPF FF++ G++V+ LTA++R + EG++IG FCF+QI P+LQ AL+ Q ++ +A+
Sbjct: 837 FPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFAR 896
Query: 893 IKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCI 952
+KELAYI QE+KNPL+GIRF + LLE++ ++E+Q+Q+LETS ACE+Q+ II +DL I
Sbjct: 897 MKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSI 956
Query: 953 EEG 955
E+G
Sbjct: 957 EDG 959
>gi|2499557|sp|Q41046.1|PHY_PINSY RecName: Full=Phytochrome
gi|1237084|emb|CAA65510.1| phytochrome [Pinus sylvestris]
Length = 1131
Score = 1293 bits (3347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/934 (67%), Positives = 753/934 (80%), Gaps = 20/934 (2%)
Query: 37 TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPF 96
T + YN+DA LL FEQS SGKSF+Y+RS+ VPE+QITAYLS+IQRGG IQPF
Sbjct: 32 TAMAQYNSDARLLQVFEQSGESGKSFDYTRSIQVHNRAVPEQQITAYLSRIQRGGRIQPF 91
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IGIDARTLFTPPSGASL 151
GC+LAVEE TFRII YSEN EMLDL ++S E + + L IG D RTLFT S SL
Sbjct: 92 GCVLAVEETTFRIIAYSEN-EEMLDLGAQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSL 150
Query: 152 AKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VIDLEP ++GD +S AGAV
Sbjct: 151 EKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAV 207
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQ+LP GD+GLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 208 QSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRR 267
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS+EL QPLCLV ST
Sbjct: 268 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTPS 327
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGLVVCHHTSPRYIPFPL 381
+PHGCH QYM NMGSI SL+MAVIIN D SMKLWGLVVCHHTSPR +PFPL
Sbjct: 328 APHGCHAQYMANMGSIRSLLMAVIINGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPL 387
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
RYACEFL+QA LQL MELQ+A QL EK+ILRTQ LLCDMLLRDAP IVTQSPSI DLV
Sbjct: 388 RYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLV 447
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 448 KCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGD 507
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+ +MHPRSSFKAFLEVVK
Sbjct: 508 AVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKR 567
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PW+ EI+AIHSLQ+++R SF+++++ +K +++ N ++QG+DELSSVA EMV
Sbjct: 568 RSLPWDNVEIDAIHSLQLILRCSFRDIDDSG-TKTMVHSRLNYLRLQGIDELSSVASEMV 626
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETATAPI VD +G +NGWNAKVAELTGLP EAMG SL+ ++V E+S VE ++
Sbjct: 627 RLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLH 686
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLM 741
AL GEE+KNVE+ L+ F QK+ V ++VNAC+SRD+ +N+ GVCFVGQD+T +KV+M
Sbjct: 687 NALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVM 746
Query: 742 DKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREI 801
DKFIR+QGDY +I+QS NPLIPPIFASDE ACCSEWNAAMEKVTGW EVIGKML EI
Sbjct: 747 DKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEI 806
Query: 802 FGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKV 861
FG CR+KGQD +TKF I+L+Q GQ E FPF FF++QG++VE LTA++RTDA+G++
Sbjct: 807 FGGCCRLKGQDAVTKFTIVLHQCNHGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRI 866
Query: 862 IGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSS 921
G FCF +I +LQ ALE Q ++ +A++KELAYIRQE+KNPL G+ F KLLE +
Sbjct: 867 TGSFCFFRIASSELQHALEVQRQQEKKCFARLKELAYIRQEIKNPLYGMMFTRKLLEETD 926
Query: 922 ISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+S++Q+Q++ETS CERQ+ ++D MDL +E+G
Sbjct: 927 LSDDQKQFVETSAVCERQMQKVMDDMDLESLEDG 960
>gi|85679505|gb|ABC72086.1| phytochrome B [Solanum tuberosum]
Length = 1130
Score = 1292 bits (3343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/955 (65%), Positives = 752/955 (78%), Gaps = 22/955 (2%)
Query: 17 HNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPE 73
HN++ +SS VN +I I Y ADA L A FEQS SGK F+YS SV + +
Sbjct: 12 HNSSQAQSSGTS--NVNYKDSISKAIAQYTADARLHAVFEQSGESGKFFDYSESVKTTTQ 69
Query: 74 GVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDF 129
VPE QITAYL+KIQRGG IQPFGCM+AV+E +FR+I YSEN EML L +S E
Sbjct: 70 SVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENAFEMLSLTPQSVPSLEKC 129
Query: 130 ELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
E+ IG D RTLFTP S L +A +REI+LLNPI +HS + KPFYAILHR+DVG
Sbjct: 130 EIL-TIGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSG--KPFYAILHRVDVG 186
Query: 190 IVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYD 249
I IDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE V++LTGYD
Sbjct: 187 IAIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYD 246
Query: 250 RVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIP 309
RVM+Y FH+D+HGEVV+E +RSDLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA P
Sbjct: 247 RVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 306
Query: 310 VMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------S 360
V V Q + L QPLCLV STLR+PHGCH QYM NMGSIASL +AVIIN D S
Sbjct: 307 VRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNS 366
Query: 361 MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCD 420
M+LWGLVV HHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL+EK++LRTQ LLCD
Sbjct: 367 MRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCD 426
Query: 421 MLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDC 480
MLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KDI WLL HGD
Sbjct: 427 MLLRDSPPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLAYHGDS 486
Query: 481 TGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHK 540
TGLSTDSLA+AGYPGAA LG AVCGMA A I+SKDFLFWFRSHTAKE+KWGGAKHHPE K
Sbjct: 487 TGLSTDSLADAGYPGAASLGDAVCGMAVAYISSKDFLFWFRSHTAKEIKWGGAKHHPEDK 546
Query: 541 DNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNT 600
D+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ E N SK +
Sbjct: 547 DDGLRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASN-SKAIVHA 605
Query: 601 QQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMG 660
++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVAELTGL EAMG
Sbjct: 606 HLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMG 665
Query: 661 KSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDY 720
KSL+ E+V++ESQ E L+ AL GEEDKNVE+KLR F ++ V+++VNAC S+DY
Sbjct: 666 KSLVHELVYKESQETAEKLLYNALRGEEDKNVEIKLRTFGAEQLEKAVFVVVNACASKDY 725
Query: 721 KNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAA 780
NN+ GVCFVGQD+T EKV+MDKFI +QGDY+AI+ S NPLIPPIFASDEN CCSEWN A
Sbjct: 726 TNNIVGVCFVGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTA 785
Query: 781 MEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNR 840
MEK+TGW R E++GKML EIFG+ CR+KG D +TKFMI+L+ I GQ T+ FPF FF+R
Sbjct: 786 MEKLTGWSRGEIVGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDR 845
Query: 841 QGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIR 900
G++V+ LTA++R + EG IG FCF+QI P+LQ AL Q ++ Y+++KELAYI
Sbjct: 846 NGKYVQALLTANKRVNMEGNTIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYIC 905
Query: 901 QEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
QE+K+PLNGIRF + LLE+++++ENQ+QYLETS ACERQ+ II +DL IE+G
Sbjct: 906 QEIKSPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDVDLENIEDG 960
>gi|33302622|sp|P34094.2|PHYB_SOLTU RecName: Full=Phytochrome B
gi|2326872|emb|CAA74908.1| phytochrome B [Solanum tuberosum]
Length = 1130
Score = 1288 bits (3333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/930 (66%), Positives = 742/930 (79%), Gaps = 17/930 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y ADA L A FEQS SGK F+YS+SV + + VPE QITAYL+KIQRGG IQPFGC
Sbjct: 35 IAQYTADARLHAVFEQSGESGKFFDYSQSVKTTTQSVPERQITAYLTKIQRGGHIQPFGC 94
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
M+AV+E +FR+I YSEN EML L +S E E+ IG D RTLFTP S L +A
Sbjct: 95 MIAVDEASFRVIAYSENACEMLSLTPQSVPSLEKCEIL-TIGTDVRTLFTPSSSVLLERA 153
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+REI+LLNPI +HS + KPFYAILHR+DVGIVIDLEP+++ DPALS+AGAVQSQK
Sbjct: 154 FGAREITLLNPIWIHSKNSG--KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 211
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AIS LQ+LPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E +RSDLE
Sbjct: 212 LAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLE 271
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV V Q + L QPLCLV STLR+PHG
Sbjct: 272 PYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHG 331
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGLVVCHHTSPRYIPFPLRYAC 385
CH QYM NMGSIASL +AVIIN D SM+LWGLVV HHTS R IPFPLRYAC
Sbjct: 332 CHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYAC 391
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDG
Sbjct: 392 EFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDG 451
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSL +AGYPGAA LG AVCG
Sbjct: 452 AALYYQGKYYPLGVTPTEAQIKDIVEWLLAYHGDSTGLSTDSLPDAGYPGAASLGDAVCG 511
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS P
Sbjct: 512 MAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSSP 571
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
WE +E++AIHSLQ+++RDSF++ E N SK + ++QG+DELSSVA EMVRLIE
Sbjct: 572 WENAEMDAIHSLQLILRDSFKDAEASN-SKAIVHAHLGEMELQGIDELSSVAREMVRLIE 630
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TATAPIF VD G INGWNAKVAELTG+ EAMGKSL+ ++V++ESQ E L+ AL
Sbjct: 631 TATAPIFAVDVEGRINGWNAKVAELTGVSVEEAMGKSLVHDLVYKESQETAEKLLYNALR 690
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
GEEDKNVE+KLR F ++ V+++VNAC S+DY NN+ GVCFVGQD+T EKV+MDKFI
Sbjct: 691 GEEDKNVEIKLRTFGAEQLEKAVFVVVNACASKDYTNNIVGVCFVGQDVTGEKVVMDKFI 750
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF 805
+QGDY+AI+ S NPLIPPIFASDEN CCSEWN AMEK+TGW R E++GKML EIFG+
Sbjct: 751 NIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEIVGKMLVGEIFGSC 810
Query: 806 CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCF 865
CR+KG D +TKFMI+L+ I GQ T+ FPF FF+R G++V+ LTA++R + EG IG F
Sbjct: 811 CRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAF 870
Query: 866 CFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN 925
CF+QI P+LQ AL Q ++ Y+++KELAYI QE+K+PLNGIRF + LLE+++++EN
Sbjct: 871 CFIQIASPELQQALRVQRQQEKKCYSQMKELAYICQEIKSPLNGIRFTNSLLEATNLTEN 930
Query: 926 QRQYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+QYLETS ACERQ+ II +DL IE+G
Sbjct: 931 QKQYLETSAACERQMSKIIRDIDLENIEDG 960
>gi|2370331|emb|CAA74992.1| phytochrome B [Nicotiana plumbaginifolia]
Length = 1135
Score = 1281 bits (3316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/930 (66%), Positives = 742/930 (79%), Gaps = 17/930 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGV-PEEQITAYLSKIQRGGLIQPFG 97
I Y ADA L A FEQS SGKSF+YS+SV + + V PE+QITAYL+KIQRGG IQPFG
Sbjct: 40 IAQYTADARLHAVFEQSGESGKSFDYSQSVKTTTQSVVPEQQITAYLTKIQRGGHIQPFG 99
Query: 98 CMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAK 153
CM+AV+E +F +I YSEN EML L +S E E+ +G D RTLFTP S L +
Sbjct: 100 CMIAVDEASFGVIAYSENACEMLSLTPQSVPSLERPEIL-TVGTDVRTLFTPSSSVLLER 158
Query: 154 AAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQ 213
A +REI+LLNPI +HS + KPFYAILHR+DVGIVIDLEP+K+ DPALS+AGAVQSQ
Sbjct: 159 AFGAREITLLNPIWIHSKNSG--KPFYAILHRVDVGIVIDLEPAKTEDPALSIAGAVQSQ 216
Query: 214 KLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDL 273
KLAV AIS LQ+LPGGD+ +LCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E +R DL
Sbjct: 217 KLAVRAISHLQSLPGGDVKILCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDL 276
Query: 274 EPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPH 333
EPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV V+Q + L QPLCLV STLR+PH
Sbjct: 277 EPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVVQDESLMQPLCLVGSTLRAPH 336
Query: 334 GCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYAC 385
GCH QYM NMGSIASL +AVIIN D SM+LWGLVV HHTS R IPFPLRYAC
Sbjct: 337 GCHAQYMANMGSIASLTLAVIINGNDEEAVGGRSSMRLWGLVVGHHTSARCIPFPLRYAC 396
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDG
Sbjct: 397 EFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDG 456
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAALLG AVCG
Sbjct: 457 AALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGLSTDSLADAGYPGAALLGDAVCG 516
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS P
Sbjct: 517 MAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLP 576
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
WE +E++AIHSLQ+++RDSF++ E N V + Q ++QG+DELSSVA EMVRLIE
Sbjct: 577 WENAEMDAIHSLQLILRDSFKDAEASNSMAVV-HAQLGEMELQGIDELSSVAREMVRLIE 635
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TATAPIF VD G INGWNAKVAELT L EAMGKSL+ ++VHEESQ ENL+ AL
Sbjct: 636 TATAPIFAVDVDGRINGWNAKVAELTDLSVEEAMGKSLVHDLVHEESQETAENLLFNALR 695
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
GEEDKNVE+KLR F ++ V+++VNAC+S+DY NN+ GVCFVGQD+T +KV+MDKFI
Sbjct: 696 GEEDKNVEMKLRTFGSEQPKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFI 755
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF 805
+QGDY+AI+ S NPLIPPIF SDEN CCSEWN AME +TGW R E+IGKML E FG+
Sbjct: 756 HIQGDYKAIVHSPNPLIPPIFVSDENTCCSEWNTAMENLTGWSRGEIIGKMLVGETFGSC 815
Query: 806 CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCF 865
CR+KG D +TKFMI+L+ I GQ T+ FPF F +R G++V+ LTA++R + EG++IG F
Sbjct: 816 CRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFSDRNGKYVQALLTANKRVNMEGQIIGAF 875
Query: 866 CFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN 925
CF+QI P+LQ AL Q +D Y+++KELAY+ QE+K+PLNGIRF + LLE++ ++E+
Sbjct: 876 CFIQIASPELQQALRVQRQQDKKCYSQMKELAYLCQEIKSPLNGIRFTNSLLEATDLTED 935
Query: 926 QRQYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+QYLETS ACERQ+ II +DL IE+G
Sbjct: 936 QKQYLETSTACERQMSKIIRDVDLENIEDG 965
>gi|464387|sp|P29130.2|PHYB_TOBAC RecName: Full=Phytochrome B
gi|295346|gb|AAA34092.1| type II phytochrome [Nicotiana tabacum]
Length = 1132
Score = 1273 bits (3295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/930 (66%), Positives = 743/930 (79%), Gaps = 18/930 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGV-PEEQITAYLSKIQRGGLIQPFG 97
I Y ADA L A FEQS SGKSF+YS+S+ + + V PE+QITAYL+KIQRGG IQPFG
Sbjct: 38 IAQYTADARLHAVFEQSGESGKSFDYSQSIKTTTQSVVPEQQITAYLTKIQRGGHIQPFG 97
Query: 98 CMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAK 153
CM+AV+E +FR+I YSEN EML L +S E E+ +G D RTLFTP S L +
Sbjct: 98 CMIAVDEASFRVIAYSENACEMLSLTPQSVPSLERPEIL-TVGTDVRTLFTPSSSVLLER 156
Query: 154 AAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQ 213
A +REI+LLNPI +HS + KPFYAILHR+DVGIVIDLEP+++ DPALS+AGAVQSQ
Sbjct: 157 AFGAREITLLNPIWIHSKNSG--KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 214
Query: 214 KLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDL 273
KLAV AIS LQ+LPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E + DL
Sbjct: 215 KLAVRAISHLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKIPDL 274
Query: 274 EPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPH 333
EPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV V+Q + L QPLCLV STLR+PH
Sbjct: 275 EPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVVQDESLMQPLCLVGSTLRAPH 334
Query: 334 GCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYAC 385
GCH QYM NMGSIASL +AVIIN D SM+LWGLVV HHTS R IPFPLRYAC
Sbjct: 335 GCHAQYMANMGSIASLTLAVIINGNDEEAVGGRSSMRLWGLVVGHHTSARCIPFPLRYAC 394
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IV QSPSIMDLVKCDG
Sbjct: 395 EFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVIQSPSIMDLVKCDG 454
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAALLG AVCG
Sbjct: 455 AALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGLSTDSLADAGYPGAALLGDAVCG 514
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS P
Sbjct: 515 MAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLP 574
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
WE +E++AIHSL +++RDSF++ E N SK + Q ++QG+DELSSVA EMVRLIE
Sbjct: 575 WENAEMDAIHSL-LILRDSFKDAEASN-SKAVVHAQLGEMELQGIDELSSVAREMVRLIE 632
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TATAPIF VD G INGWNAKVAELT L EAMGKSL+ ++VH+ESQ E L+ AL
Sbjct: 633 TATAPIFAVDVEGRINGWNAKVAELTDLSVEEAMGKSLVHDLVHKESQETAEKLLFNALR 692
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
GEEDKNVE+KLR F ++ V+++VNAC+S+DY NN+ GVCFVGQD+T +KV+MDKFI
Sbjct: 693 GEEDKNVEIKLRTFGPEQLKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFI 752
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF 805
+QGDY+AI+ S NPLIPPIFASDEN CCSEWN AMEK+TGW R E+IGKML EIFG+
Sbjct: 753 HIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEIIGKMLVGEIFGSC 812
Query: 806 CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCF 865
CR+KG D +TKFMI+L+ I Q T+ FPF FF+R G++V+ LTA++R + EG++IG F
Sbjct: 813 CRLKGPDAMTKFMIVLHNAIGVQDTDKFPFSFFDRNGKYVQALLTANKRVNMEGQIIGAF 872
Query: 866 CFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN 925
CF+QI P+LQ AL Q ++ Y+++KELAY+ QE+K+PLNGIRF + LLE++ ++EN
Sbjct: 873 CFIQIASPELQQALRVQRQQEKKCYSQMKELAYLCQEIKSPLNGIRFTNSLLEATDLTEN 932
Query: 926 QRQYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+QYLETS ACERQ+ II +DL IE+G
Sbjct: 933 QKQYLETSAACERQMSKIIRDVDLENIEDG 962
>gi|255556392|ref|XP_002519230.1| phytochrome B, putative [Ricinus communis]
gi|223541545|gb|EEF43094.1| phytochrome B, putative [Ricinus communis]
Length = 1141
Score = 1273 bits (3293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/929 (65%), Positives = 745/929 (80%), Gaps = 16/929 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS SGKSF+YS+SV + + + E+QITAYLSKIQRGG IQPFGC
Sbjct: 47 IAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTNQSIAEQQITAYLSKIQRGGHIQPFGC 106
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
M+AV+E +FR+I YSEN E+L L +S E E+ IG D RTLFT S L KA
Sbjct: 107 MIAVDEASFRVIAYSENARELLGLMPQSVPSLEKPEILS-IGTDVRTLFTQSSALLLEKA 165
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+REI+LLNP+ +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQK
Sbjct: 166 FGAREITLLNPLWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQK 223
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AIS+LQ+LP GD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E ++ DLE
Sbjct: 224 LAVRAISQLQSLPSGDVRLLCDTVVECVRELTGYDRVMVYKFHEDEHGEVVAENKQPDLE 283
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY+G+H+PA DIPQA+RFLFKQ+RVRMI DCHA PV +IQ + L QPLCLV STLR+PHG
Sbjct: 284 PYIGLHYPATDIPQASRFLFKQSRVRMIVDCHATPVSIIQDEALMQPLCLVGSTLRAPHG 343
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYACE 386
CH QYM NMGSIASL MAVIIN D SM+LWGLVVCHHTS R IPFPLRYACE
Sbjct: 344 CHAQYMANMGSIASLAMAVIINGNDDEAIGGRSSMRLWGLVVCHHTSARSIPFPLRYACE 403
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGA
Sbjct: 404 FLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGA 463
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYY G+ + +GVTP E+Q+KDI WLL HGD TGLSTDSLA+AGYPGAALLG AVCGM
Sbjct: 464 ALYYQGKYYPLGVTPAEAQIKDIVEWLLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGM 523
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A IT+KDFLFWFRSHTAKE+KWGGAKHHPE KD+ +MHPRSSFKAFLEVVK+RS PW
Sbjct: 524 AVAYITNKDFLFWFRSHTAKEIKWGGAKHHPEDKDDSQRMHPRSSFKAFLEVVKSRSLPW 583
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
+ +E++AIHSLQ+++RDSF++ E N SK N Q G ++QG+DELSSVA EMVRLIET
Sbjct: 584 DNAEMDAIHSLQLILRDSFRDAEATN-SKAVANAQLRGLELQGMDELSSVAREMVRLIET 642
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
ATAPIF VD G INGWNAKVAELTGL EAMGKSL+ +++++ES+ V+ L+ RAL G
Sbjct: 643 ATAPIFAVDIDGCINGWNAKVAELTGLSVEEAMGKSLVHDLIYKESKETVDQLLRRALRG 702
Query: 687 EEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIR 746
EEDKN+E+K+R F + V+++VNAC+S+DY NN+ GVCFVGQDIT +KV+MDKFI
Sbjct: 703 EEDKNIEIKMRTFGFGHEKKAVFVVVNACSSKDYMNNIVGVCFVGQDITGQKVVMDKFIH 762
Query: 747 LQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFC 806
+QGDY AI+ S NPLIPPIFASDEN CC EWN AMEK+TGW + E+IGKML E+FG+ C
Sbjct: 763 IQGDYRAIVHSPNPLIPPIFASDENTCCLEWNTAMEKLTGWAQGEIIGKMLVGEVFGSCC 822
Query: 807 RMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFC 866
R+K D+LT+FMI+L+ I GQ T+ FPF FF++ G+ V+ LTAS+R + +G++IG FC
Sbjct: 823 RLKSPDVLTRFMIVLHNAIGGQDTDKFPFSFFDKNGKVVQALLTASKRVNMDGQIIGAFC 882
Query: 867 FMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQ 926
F+QI P+LQ AL+AQ ++ + ++KELAYI QE+KNPL+GIRF + LLE++ ++E+Q
Sbjct: 883 FLQIASPELQQALKAQRQQEKKGFTRMKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQ 942
Query: 927 RQYLETSDACERQIMTIIDGMDLRCIEEG 955
+Q+LETS ACE+QI+ II +DL IE+G
Sbjct: 943 KQFLETSAACEKQILKIIRDVDLESIEDG 971
>gi|59798480|sp|Q9ZS62.1|PHYB1_SOLLC RecName: Full=Phytochrome B1
gi|4038600|emb|CAA05293.1| phytochrome B1 [Solanum lycopersicum]
Length = 1131
Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/954 (64%), Positives = 748/954 (78%), Gaps = 19/954 (1%)
Query: 17 HNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPE 73
HN++ ++ + +N +I I Y ADA L A FEQS SGKSF+YS+SV + +
Sbjct: 12 HNSSQGQAQSSGTSNMNYKDSISKAIAQYTADARLHAVFEQSGESGKSFDYSQSVKTTTQ 71
Query: 74 GVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFE 130
VPE QITAYL+KIQRGG IQPFGCM+AV+E +FRII YSEN EML L +S D
Sbjct: 72 SVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRIIAYSENACEMLSLTPQSVPSLDKS 131
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+G D RTLFTP S L +A +REI+LLNPI +HS + KPFYAILHR+DVGI
Sbjct: 132 EILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSG--KPFYAILHRVDVGI 189
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
VIDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE V++LTGYDR
Sbjct: 190 VIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDR 249
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM+Y FH+D+HGEVV+E +RSDLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV
Sbjct: 250 VMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPV 309
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SM 361
V Q + L QPLCLV STLR+PHGCH QYM NMGSIASL +AVIIN D SM
Sbjct: 310 RVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNSM 369
Query: 362 KLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDM 421
+LWGLVV HHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL+EK++LRTQ LLCDM
Sbjct: 370 RLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDM 429
Query: 422 LLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCT 481
LLRD+P IVTQSPSIMDLVKCDGAALYY + + +GVTPTE+Q+KDI WLL HGD T
Sbjct: 430 LLRDSPPGIVTQSPSIMDLVKCDGAALYYQRKYYPLGVTPTEAQIKDIVEWLLAYHGDST 489
Query: 482 GLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKD 541
GLSTDSLA+AGYPGAA LG AVCGMA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD
Sbjct: 490 GLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKD 549
Query: 542 NGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ 601
+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ E N +
Sbjct: 550 DGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASNSKAIVHALG 609
Query: 602 QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGK 661
+ ++QG+DELSSVA EMVRLIETATAPIFGVD +G INGWN KV ELTGL A EA GK
Sbjct: 610 E--MELQGIDELSSVAREMVRLIETATAPIFGVDVNGRINGWNEKVVELTGLSAEEAKGK 667
Query: 662 SLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYK 721
SL+ +++++ESQ + E L+ AL G E KNVE+KLR F ++ V+++VNAC+SRDY
Sbjct: 668 SLVHDLLYKESQESAEKLLYNALRGVEGKNVEIKLRTFGAEQVEKAVFLVVNACSSRDYT 727
Query: 722 NNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAM 781
N++ GV FVGQD+T EK++MDKFI +QGDY+AI+ S NPLIPPIFASDEN CSEWN AM
Sbjct: 728 NSIVGVSFVGQDVTGEKIVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTSCSEWNTAM 787
Query: 782 EKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQ 841
EK++GW R E++GKML EIFG+ CR+KG D +TKFMI+L+ I GQ T+ FPF FF+R
Sbjct: 788 EKLSGWSREEIVGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRN 847
Query: 842 GQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQ 901
G++V+ LTA++R + EG IG FCF+QI P+LQ AL Q ++ Y+++KELAYI Q
Sbjct: 848 GKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYICQ 907
Query: 902 EVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
EVK+PLNGIRF + LLE+++++E Q+QYLETS ACERQ+ II +DL IE+G
Sbjct: 908 EVKSPLNGIRFTNSLLEATNLTEYQKQYLETSAACERQMSKIIRDVDLENIEDG 961
>gi|224101559|ref|XP_002312330.1| predicted protein [Populus trichocarpa]
gi|222852150|gb|EEE89697.1| predicted protein [Populus trichocarpa]
Length = 1142
Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/928 (65%), Positives = 744/928 (80%), Gaps = 14/928 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS SGKSF+YS+SV + + VPEEQITAYLSKIQRGG IQPFGC
Sbjct: 41 IAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQSVPEEQITAYLSKIQRGGHIQPFGC 100
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGLI--GIDARTLFTPPSGASLAKAA 155
M+AV+E +FR+I YSEN EML L +S + ++ G D RTLF P S A L KA
Sbjct: 101 MIAVDEGSFRVIAYSENAKEMLGLTPQSVPSLDKQEILSDGTDVRTLFRPSSSAMLEKAF 160
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
+REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKL
Sbjct: 161 GAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKL 218
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
AV +IS+LQ+LPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E +R+DLEP
Sbjct: 219 AVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAENKRADLEP 278
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
Y+G+H+P+ DIPQA+RFLFKQNRVRMI DCHA PV VIQ + L QPLCLV STLR+PHGC
Sbjct: 279 YIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVRVIQDEALMQPLCLVGSTLRAPHGC 338
Query: 336 HLQYMTNMGSIASLVMAVIINS--------KDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
H QYM NMGSIASL MAVIIN ++S +LWGLVVCHHTS R IPFPLRYACEF
Sbjct: 339 HAQYMANMGSIASLAMAVIINGNEEEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEF 398
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA
Sbjct: 399 LMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAA 458
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 459 LYYQGQYYPLGVTPTEAQIKDIVEWLLALHGDSTGLSTDSLADAGYPGAASLGNAVCGMA 518
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS WE
Sbjct: 519 VAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLLWE 578
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
+E++AIHSLQ+++RDSF+++E N SK + Q +++QG+DELSSVA EMVRLIETA
Sbjct: 579 NAEMDAIHSLQLILRDSFRDVEATN-SKAVVHAQLEDTELQGMDELSSVAREMVRLIETA 637
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
TAPIF VD G INGWNAKVAELTGL +AMGKSL+ ++V++E + V+ L+ RAL GE
Sbjct: 638 TAPIFAVDVDGCINGWNAKVAELTGLSVDKAMGKSLVHDLVYKEYEETVDKLLHRALRGE 697
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
EDKNVE+KLR F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T +KV+MDK++ +
Sbjct: 698 EDKNVEIKLRTFGSEHQKKALFVVVNACSSKDYMNNIVGVCFVGQDVTGQKVVMDKYVHI 757
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCR 807
QGDY+AI+ S NPLIPPIFASDEN CC EWN AMEK TGW R EVIGKML E+FG+ C+
Sbjct: 758 QGDYKAIVHSPNPLIPPIFASDENTCCLEWNTAMEKFTGWSRGEVIGKMLVGEVFGSCCQ 817
Query: 808 MKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCF 867
+KG D LTKFMI L+ I GQ T+ PF FF+R G++V+ LTA++R + EG+++G FCF
Sbjct: 818 LKGSDALTKFMIALHNAIGGQDTDKLPFSFFDRNGKYVQALLTANKRVNMEGEIVGAFCF 877
Query: 868 MQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQR 927
+QI +LQ AL+ Q ++ A++KELAYI QE++NPL+G+RF + LLE++ ++E+Q+
Sbjct: 878 LQIASNELQQALKVQRQQEKKCSARMKELAYICQEIRNPLSGLRFTNSLLENTDLTEDQK 937
Query: 928 QYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+LETS ACE+QI+ I +DL IE G
Sbjct: 938 QFLETSAACEKQILKITRDVDLESIENG 965
>gi|449432920|ref|XP_004134246.1| PREDICTED: phytochrome B-like [Cucumis sativus]
Length = 1132
Score = 1270 bits (3286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/930 (65%), Positives = 747/930 (80%), Gaps = 17/930 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS SGKSF+YS+S+ + + VPE+QITAYLSKIQRGG IQPFGC
Sbjct: 37 IAQYTVDARLHAVFEQSGESGKSFDYSQSIKTSTQSVPEQQITAYLSKIQRGGHIQPFGC 96
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
M+A+EE +FR+I YSEN E+L L +S E E+ IG D R LFT S L KA
Sbjct: 97 MIAIEEASFRVIAYSENARELLGLTPQSVPSLEKPEIL-TIGTDVRNLFTSNSAILLEKA 155
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+REI+LLNP+ +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQK
Sbjct: 156 FGAREITLLNPVWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQK 213
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AIS+LQALPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E +R DLE
Sbjct: 214 LAVRAISQLQALPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLE 273
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY+G+H+P+ DIPQA+RFLFKQNRVRMI DCHA PV VIQ L Q LCLV STLR+PHG
Sbjct: 274 PYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPVRVIQDAGLMQHLCLVGSTLRAPHG 333
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYACE 386
CH QYM NMGSIASL MAV+IN D S +LWGLVVCHHTS R IPFPLRYACE
Sbjct: 334 CHAQYMANMGSIASLAMAVVINGNDDEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACE 393
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGA
Sbjct: 394 FLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGA 453
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAALLG AVCGM
Sbjct: 454 ALYYQGKYYPLGVTPTEAQIKDIVEWLLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGM 513
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PW
Sbjct: 514 AVAYITKKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 573
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
E +E++AIHSLQ+++RDSF+ + +SK + +QG+DELSSVA EMVRLIET
Sbjct: 574 ENAEMDAIHSLQLILRDSFKN-DVAINSKAVVHPHLGDLDLQGIDELSSVAREMVRLIET 632
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
ATAPIF VD+ G INGWNAK+AELTGL EAMGKSL+ ++V++ES+ V+ L+ RAL G
Sbjct: 633 ATAPIFAVDADGRINGWNAKIAELTGLAVEEAMGKSLVRDLVYKESEETVDRLVSRALKG 692
Query: 687 EEDKNVELKLRKFELQK-QHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
EEDKN+E+K+R F ++ Q + +++VNAC+SRDY +N+ GVCFVGQD+T +KV MDKF+
Sbjct: 693 EEDKNIEIKMRTFGPEEDQRTPFFVVVNACSSRDYTDNIVGVCFVGQDVTCQKVFMDKFV 752
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF 805
+QGDY+AII S NPLIPPIFASD+N CCSEWN AMEK+TGW R ++IGKML E+FG+
Sbjct: 753 SIQGDYKAIIHSPNPLIPPIFASDDNTCCSEWNTAMEKLTGWSREDIIGKMLVGEVFGSC 812
Query: 806 CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCF 865
CR+KG D LTKFMI+L+ I GQ E +PF F++++G++V+ LTA++R + EG+++G F
Sbjct: 813 CRLKGPDALTKFMIVLHSAIGGQDNEKYPFSFYDKKGKYVQALLTANKRMNMEGQIVGAF 872
Query: 866 CFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN 925
CF+QI P+LQ L Q ++ + +A++KELAYI QEVK+PL+GIRF + LLE++ +SE+
Sbjct: 873 CFLQIASPELQQTLRMQRQQEKNRFARMKELAYICQEVKSPLSGIRFTNSLLEATDLSED 932
Query: 926 QRQYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+Q+LETS ACE+Q++ II+ MDL CI++G
Sbjct: 933 QKQFLETSVACEKQMLKIIEDMDLECIDDG 962
>gi|449516898|ref|XP_004165483.1| PREDICTED: phytochrome B-like [Cucumis sativus]
Length = 1132
Score = 1269 bits (3285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/930 (65%), Positives = 747/930 (80%), Gaps = 17/930 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS SGKSF+YS+S+ + + VPE+QITAYLSKIQRGG IQPFGC
Sbjct: 37 IAQYTVDARLHAVFEQSGESGKSFDYSQSIKTSTQSVPEQQITAYLSKIQRGGHIQPFGC 96
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
M+A+EE +FR+I YSEN E+L L +S E E+ IG D R LFT S L KA
Sbjct: 97 MIAIEEASFRVIAYSENARELLGLTPQSVPSLEKPEIL-TIGTDVRNLFTSNSAILLEKA 155
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+REI+LLNP+ +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQK
Sbjct: 156 FGAREITLLNPVWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQK 213
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AIS+LQALPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E +R DLE
Sbjct: 214 LAVRAISQLQALPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLE 273
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY+G+H+P+ DIPQA+RFLFKQNRVRMI DCHA PV VIQ L Q LCLV STLR+PHG
Sbjct: 274 PYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPVRVIQDAGLMQHLCLVGSTLRAPHG 333
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYACE 386
CH QYM NMGSIASL MAV+IN D S +LWGLVVCHHTS R IPFPLRYACE
Sbjct: 334 CHAQYMANMGSIASLAMAVVINGNDDEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACE 393
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGA
Sbjct: 394 FLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGA 453
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAALLG AVCGM
Sbjct: 454 ALYYQGKYYPLGVTPTEAQIKDIVEWLLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGM 513
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PW
Sbjct: 514 AVAYITKKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 573
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
E +E++AIHSLQ+++RDSF+ + +SK + +QG+DELSSVA EMVRLIET
Sbjct: 574 ENAEMDAIHSLQLILRDSFKN-DVAINSKAVVHPHLGDLDLQGIDELSSVAREMVRLIET 632
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
ATAPIF VD+ G INGWNAK+AELTGL EAMGKSL+ ++V++ES+ V+ L+ RAL G
Sbjct: 633 ATAPIFAVDADGRINGWNAKIAELTGLAVEEAMGKSLVRDLVYKESEETVDRLVSRALKG 692
Query: 687 EEDKNVELKLRKFELQK-QHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
EEDKN+E+K+R F ++ Q + +++VNAC+SRDY +N+ GVCFVGQD+T +KV MDKF+
Sbjct: 693 EEDKNIEIKMRTFGPEEDQRTPFFVVVNACSSRDYTDNIVGVCFVGQDVTCQKVFMDKFV 752
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF 805
+QGDY+AII S NPLIPPIFASD+N CCSEWN AMEK+TGW R ++IGKML E+FG+
Sbjct: 753 SIQGDYKAIIHSPNPLIPPIFASDDNTCCSEWNTAMEKLTGWSREDIIGKMLVGEVFGSC 812
Query: 806 CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCF 865
CR+KG D LTKFMI+L+ I GQ E +PF F++++G++V+ LTA++R + EG+++G F
Sbjct: 813 CRLKGPDALTKFMIVLHSAIGGQDNEKYPFSFYDKKGKYVQALLTANKRMNMEGQIVGAF 872
Query: 866 CFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN 925
CF+QI P+LQ L Q ++ + +A++KELAYI QEVK+PL+GIRF + LLE++ +SE+
Sbjct: 873 CFLQIASPELQQTLRMQRQQEKNRFARMKELAYICQEVKSPLSGIRFTNSLLEATDLSED 932
Query: 926 QRQYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+Q+LETS ACE+Q++ II+ MDL CI++G
Sbjct: 933 QKQFLETSVACEKQMLKIIEDMDLECIDDG 962
>gi|78643884|emb|CAJ21305.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1268 bits (3282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/967 (63%), Positives = 748/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FGN CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGNCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|10954091|gb|AAG25725.1|AF309806_1 phytochrome B1 [Populus trichocarpa]
Length = 1151
Score = 1267 bits (3278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/928 (65%), Positives = 743/928 (80%), Gaps = 14/928 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS SGKSF+YS+SV + + VPEEQITAYLSKIQRGG IQPFGC
Sbjct: 41 IAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQSVPEEQITAYLSKIQRGGHIQPFGC 100
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGLI--GIDARTLFTPPSGASLAKAA 155
M+AV+E +FR+I YSEN EML L +S + ++ G D RTLF P S A L KA
Sbjct: 101 MIAVDEGSFRVIAYSENAKEMLGLTPQSVPSLDKQEILSDGTDVRTLFRPSSSAMLEKAF 160
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
+REI LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKL
Sbjct: 161 GAREIILLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKL 218
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
AV +IS+LQ+LPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E +R+DLEP
Sbjct: 219 AVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAENKRADLEP 278
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
Y+G+H+P+ DIPQA+RFLFKQNRVRMI DCHA PV VIQ + L QPLCLV STLR+PHGC
Sbjct: 279 YIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVRVIQDEALMQPLCLVGSTLRAPHGC 338
Query: 336 HLQYMTNMGSIASLVMAVIINS--------KDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
H QYM NMGSIASL MAVIIN ++S +LWGLVVCHHTS R IPFPLRYACEF
Sbjct: 339 HAQYMANMGSIASLAMAVIINGNEEEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEF 398
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA
Sbjct: 399 LMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAA 458
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 459 LYYQGQYYPLGVTPTEAQIKDIVEWLLALHGDSTGLSTDSLADAGYPGAASLGNAVCGMA 518
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS WE
Sbjct: 519 VAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLLWE 578
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
+E++AIHSLQ+++RDSF+++E N SK + Q +++QG+DELSSVA EMVRLIETA
Sbjct: 579 NAEMDAIHSLQLILRDSFRDVEATN-SKAVVHAQLEDTELQGMDELSSVAREMVRLIETA 637
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
TAPIF VD G INGWNAKVAELTGL +AMGKSL+ ++V++E + V+ L+ RAL GE
Sbjct: 638 TAPIFAVDVDGCINGWNAKVAELTGLSVDKAMGKSLVHDLVYKEYEETVDKLLHRALRGE 697
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
EDKNVE+KLR F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T +KV+MDK++ +
Sbjct: 698 EDKNVEIKLRTFGSEHQKKALFVVVNACSSKDYMNNIVGVCFVGQDVTGQKVVMDKYVHI 757
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCR 807
QGDY+AI+ S NPLIPPIFASDEN CC EWN AMEK TGW R EVIGKML E+FG+ C+
Sbjct: 758 QGDYKAIVHSPNPLIPPIFASDENTCCLEWNTAMEKFTGWSRGEVIGKMLVGEVFGSCCQ 817
Query: 808 MKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCF 867
+KG D LTKFMI L+ I GQ T+ PF FF+R G++V+ LTA++R + EG+++G FCF
Sbjct: 818 LKGSDALTKFMIALHNAIGGQDTDKLPFSFFDRNGKYVQALLTANKRVNMEGEIVGAFCF 877
Query: 868 MQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQR 927
+QI +LQ AL+ Q ++ A++KELAYI QE++NPL+G+RF + LLE++ ++E+Q+
Sbjct: 878 LQIASNELQQALKVQRQQEKKCSARMKELAYICQEIRNPLSGLRFTNSLLENTDLTEDQK 937
Query: 928 QYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+LETS ACE+QI+ I +DL IE G
Sbjct: 938 QFLETSAACEKQILKITRDVDLESIENG 965
>gi|78643880|emb|CAJ21303.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1266 bits (3276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/937 (65%), Positives = 740/937 (78%), Gaps = 16/937 (1%)
Query: 31 PVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRG 90
P I Y DA L A FEQS +GKSF+YS+SV +P + VPEEQITAYLSKIQRG
Sbjct: 31 PTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRG 90
Query: 91 GLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPP 146
G IQPFGCM+A +E +FR+I YSEN +ML L +S E E+ +G D R LF P
Sbjct: 91 GHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEIL-FVGADVRILFRPS 149
Query: 147 SGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSL 206
S L KA +REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+
Sbjct: 150 SAVLLEKAFGAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSI 207
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVV+ V++LTGYDRVM+Y FH+D+HGEVV+
Sbjct: 208 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVA 267
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
E +R DLEPY+G+H+P+ DIPQA+RFLFKQNRVRMI DCHAIPV VIQ + L QPLCLV
Sbjct: 268 ENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVSVIQDEGLMQPLCLVG 327
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIP 378
STLR+PHGCH QYM NMGSIASL MAVII D SM+LWGLVVCHHTS R IP
Sbjct: 328 STLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIP 387
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLRD+P IVTQSPSIM
Sbjct: 388 FPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIM 447
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA
Sbjct: 448 DLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAF 507
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG AVCGMA A I +DFLFWFRSHTAKEVKWGGAKHHPE KD+G +MHPRSSFKAFLEV
Sbjct: 508 LGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 567
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK+RS PWE +E++AIHSLQ+++RDSF++ E N SK +TQ ++QG+DELSSVA
Sbjct: 568 VKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAVVHTQLKDMELQGMDELSSVAR 626
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETATAPIF VD G INGWNAKVAELTGL EAMGKSL+ ++V++E + V+
Sbjct: 627 EMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDK 686
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
LI RA+ GEEDKNVE+KLR F + Q V+++VNAC+S+DY +N+ GVCFVGQD+T +K
Sbjct: 687 LIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDNIVGVCFVGQDVTGQK 746
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
V+MDK++ +QGDY+AI+ S NP IPPIFASDEN CC EWN AMEK+TGW R EV+GKML
Sbjct: 747 VVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEKLTGWSRGEVVGKMLV 806
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FG+ CR+KG D LTKFMI L+ I G T+ PF FF+R + V+ LTA++R + +
Sbjct: 807 GEVFGSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMK 866
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
G +IG FCF+QI P+LQP+L+ Q ++ +A++KELAYI QE+KNPL+GI F + LLE
Sbjct: 867 GDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLE 926
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
++ ++E+Q+Q+LETS ACE+QI+ II +DL IE G
Sbjct: 927 NTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENG 963
>gi|78643894|emb|CAJ21310.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1266 bits (3276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/967 (63%), Positives = 748/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643898|emb|CAJ21312.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1266 bits (3276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/967 (63%), Positives = 748/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|258677127|gb|ACV87354.1| phytochrome B [Aquilegia formosa]
Length = 1132
Score = 1266 bits (3276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/945 (65%), Positives = 753/945 (79%), Gaps = 23/945 (2%)
Query: 32 VNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISP-PEGVPEEQITAYLSKIQRG 90
VNK I + DA L A FEQS SGK F+YS+S+ S + +PE+QITAYLS+IQRG
Sbjct: 33 VNKA---IAQFTVDARLHAVFEQSGESGKPFDYSQSIRSTTSQSIPEQQITAYLSRIQRG 89
Query: 91 GLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL--IGIDARTLFTPPS 147
G IQPFGCM++V+E +FR+I +SEN EMLDL +S + L +G D RTLFT S
Sbjct: 90 GHIQPFGCMISVDESSFRVIAFSENATEMLDLTPQSVPTLDKPQLLDVGTDVRTLFTQSS 149
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
L KA ++REI+LLNP+ +HS + KPFYAILH+IDVGIVIDLEP+++ DPALS+A
Sbjct: 150 VGLLEKAFSAREITLLNPVWIHSKNSG--KPFYAILHKIDVGIVIDLEPARTEDPALSIA 207
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQK+AV AISRLQ+LPGGDI +LCDTVVE+V+ LTGYDRVM+Y FHDD+HGEVV+E
Sbjct: 208 GAVQSQKIAVRAISRLQSLPGGDINILCDTVVENVRDLTGYDRVMVYKFHDDEHGEVVAE 267
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
+RSDLEP++G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV VIQ + L QPLCLV S
Sbjct: 268 SKRSDLEPFIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVHVIQDEALMQPLCLVGS 327
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS--------MKLWGLVVCHHTSPRYIPF 379
TLR+PHGCH QYM NMGSIASL +AV+IN D MKLWGLVVCHHTS R IPF
Sbjct: 328 TLRAPHGCHAQYMANMGSIASLALAVVINGNDEEGTSGRNPMKLWGLVVCHHTSARCIPF 387
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLR+ACEFL+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 388 PLRHACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMD 447
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDG+ALYY G+ + +GVTPTE+Q+KDI WL HGD TG+STDSLA+AGYPGAA L
Sbjct: 448 LVKCDGSALYYKGKFYPIGVTPTEAQMKDIVDWLWAYHGDSTGVSTDSLADAGYPGAASL 507
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AV GMA A ITS+DFLFWFRS+TAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 508 GDAVRGMAVAYITSRDFLFWFRSNTAKEIKWGGAKHHPEDKDDGHRMHPRSSFKAFLEVV 567
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
K+RS PWE +E++AIHSLQ+++RDSF++ E N SK + ++QGVDELSSVA E
Sbjct: 568 KSRSLPWENAEMDAIHSLQLILRDSFRDAEGSN-SKPLITSPPGDLELQGVDELSSVARE 626
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRLIETATAPIF VDS G INGWNAK+AELTGL EAMGKSL+ ++V +ES V+NL
Sbjct: 627 MVRLIETATAPIFAVDSDGRINGWNAKIAELTGLSVGEAMGKSLVHDLVFKESVEVVDNL 686
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKV 739
+ A G+EDKNVE+KLRKF +K ++++VNA +SRDY NN+ GVCFVGQD+T +KV
Sbjct: 687 LKHAFRGQEDKNVEIKLRKFIPRKPEEAIFVVVNARSSRDYTNNIVGVCFVGQDVTSQKV 746
Query: 740 LMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPR 799
+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R E++GKML
Sbjct: 747 VMDKFIHIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWDRGEIMGKMLVG 806
Query: 800 EIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEG 859
E+FG CR+KG D LTKFMI+L+ I GQ T+ FPF FFNR G++V+ LTA++R + EG
Sbjct: 807 EVFGGCCRLKGPDSLTKFMIVLHSAIGGQDTDKFPFAFFNRDGKYVQALLTANKRANLEG 866
Query: 860 KVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLES 919
++IG FCF+QI P+LQ ALE Q ++ +A++KELAYI QE+KNPL+GIRF + LLE+
Sbjct: 867 QIIGAFCFLQIASPELQHALEIQRQQEKKCFARVKELAYICQEIKNPLSGIRFTNTLLEA 926
Query: 920 SSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG-----RCVF 959
+ ++E+Q+Q+LETS ACERQ+M II +DL+ IE+G RC F
Sbjct: 927 TDLTEDQKQFLETSAACERQMMKIIKDVDLQNIEDGSLELERCDF 971
>gi|190586167|gb|ACE79200.1| phytochrome B-3 [Glycine max]
Length = 1100
Score = 1265 bits (3274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/930 (64%), Positives = 743/930 (79%), Gaps = 16/930 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS SG+SFNYS S+ E VPE+QITAYL KIQRGG IQPFG
Sbjct: 5 IAQYTEDARLHAVFEQSGESGRSFNYSESIRIASESVPEQQITAYLVKIQRGGFIQPFGS 64
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAK 153
M+AV+EP+FRI+GYS+N +ML + +S + + +G D R LFT S L K
Sbjct: 65 MIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGTDVRALFTHSSALLLEK 124
Query: 154 AAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQ 213
A ++REISL+NPI +HS R+ KPFY ILHRIDVGIVIDLEP+++ DPALS+AGAVQSQ
Sbjct: 125 AFSAREISLMNPIWIHS--RTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQ 182
Query: 214 KLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDL 273
KLAV AIS+LQ+LPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVVSE +R DL
Sbjct: 183 KLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKRPDL 242
Query: 274 EPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPH 333
EPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA V V+Q + L QPLCLV STLR+PH
Sbjct: 243 EPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPH 302
Query: 334 GCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYAC 385
GCH QYM NMGSIASLVMAVIIN D SM+LWGLVVCHHTS R IPFPLRYAC
Sbjct: 303 GCHAQYMANMGSIASLVMAVIINGNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPLRYAC 362
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL+QAF LQL MELQ+A Q EK +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDG
Sbjct: 363 EFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDG 422
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALY+ G + +GVTPTE+Q++DI WLL HGD TGLSTDSL +AGYPGAA LG AVCG
Sbjct: 423 AALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGAASLGDAVCG 482
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS P
Sbjct: 483 MAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLP 542
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
WE +E++AIHSLQ+++RDSF++ E N SK + + + ++QGVDELSSVA EMVRLIE
Sbjct: 543 WENAEMDAIHSLQLILRDSFKDAEHRN-SKAVADPRVSEQELQGVDELSSVAREMVRLIE 601
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TATAPIF VD G +NGWNAKV+ELTGLP EAMGKSL+ ++V +ES+ + L+ RAL
Sbjct: 602 TATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETMNKLLSRALK 661
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
GEEDKNVE+K+R F ++Q+ V+++VNAC+S+D+ NNV GVCFVGQD+T +K++MDKFI
Sbjct: 662 GEEDKNVEIKMRTFGPERQNKAVFLVVNACSSKDFTNNVVGVCFVGQDVTGQKIVMDKFI 721
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF 805
+QGDY+AI+ S NPLIPPIFASD+N CC EWN AMEK+TGW R +VIGKML E+FG+
Sbjct: 722 NIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRVDVIGKMLVGEVFGSC 781
Query: 806 CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCF 865
C++KG D +TKFMI+L+ + GQ T+ FPF F +R G++V+ LTA++R + EG++IG F
Sbjct: 782 CQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVNMEGQIIGAF 841
Query: 866 CFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN 925
CF+QI+ P+LQ AL+AQ ++ + + ++KELAYI Q VKNPL+GIRF + LLE++S++
Sbjct: 842 CFLQIMSPELQQALKAQRQQEKNSFGRMKELAYICQGVKNPLSGIRFTNSLLEATSLTNE 901
Query: 926 QRQYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+Q+LETS ACE+Q++ II +DL IE+G
Sbjct: 902 QKQFLETSVACEKQMLKIIRDVDLESIEDG 931
>gi|78643916|emb|CAJ21321.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1265 bits (3273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/967 (63%), Positives = 748/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643914|emb|CAJ21320.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1265 bits (3273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/967 (63%), Positives = 747/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FGN CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGNCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF +I P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFFRIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643918|emb|CAJ21322.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1265 bits (3273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/967 (63%), Positives = 746/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643906|emb|CAJ21316.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1264 bits (3272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/967 (63%), Positives = 748/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643912|emb|CAJ21319.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1264 bits (3272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/967 (63%), Positives = 748/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643856|emb|CAJ21291.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1264 bits (3272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/967 (63%), Positives = 748/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRLIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|357112543|ref|XP_003558068.1| PREDICTED: phytochrome B-like [Brachypodium distachyon]
Length = 1181
Score = 1264 bits (3272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/945 (64%), Positives = 742/945 (78%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DAGL A FEQS ASG+SF+YS+S+++PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 72 VAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPSTSSEQQIAAYLSRIQRGGHIQPFGC 131
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ +SEN ++LDL L+ +G D+R LF+PPSG
Sbjct: 132 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADSRLLFSPPSGVL 191
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 192 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 249
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FHDD+HGEV++E RR
Sbjct: 250 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAESRR 309
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ + QPLCLV STLR
Sbjct: 310 TDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPAMPQPLCLVGSTLR 369
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 370 SPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMGRGAIPSAMKLWGLVVCHHTSPRCI 429
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 430 PFPLRYACEFLMQAFGLQLNMELQLAYQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 489
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GA
Sbjct: 490 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTVCHGDSTGLSTDSLADAGYSGAT 549
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 550 ALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 609
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 610 VVKSRSLPWENAEMDAIHSLQLILRDSFRDAREGTSNSKAIVDGQVQLGELELRGIDELS 669
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+ +++ +ES+
Sbjct: 670 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLTVEEAMGKSLVTDLIFKESEE 729
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
VE L+ +AL GEEDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQDI
Sbjct: 730 IVEKLLSQALRGEEDKNVEIKLKTFGPEQSKGAIFVIVNACSSRDYTKNIVGVCFVGQDI 789
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKF+ +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EVIG
Sbjct: 790 TGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMEKLTGWSRGEVIG 849
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI L+ I GQ +E PF FF++ G++V+ LTA+ R
Sbjct: 850 KLLVGEVFGNCCRLKGPDALTKFMIALHNAIGGQDSEKLPFSFFDKNGKYVQALLTANTR 909
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q ++ YA++KELAYI QE+KNPL+GIRF +
Sbjct: 910 SKMDGEAIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTN 969
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 970 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQRIEDGSLVL 1014
>gi|78643900|emb|CAJ21313.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1264 bits (3272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/967 (63%), Positives = 746/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643896|emb|CAJ21311.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1264 bits (3270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/967 (63%), Positives = 747/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSH AKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHPAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTGLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643910|emb|CAJ21318.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1263 bits (3269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/967 (63%), Positives = 747/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH YM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643908|emb|CAJ21317.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1263 bits (3268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/967 (63%), Positives = 747/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFK
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKH 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643886|emb|CAJ21306.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1263 bits (3268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/967 (63%), Positives = 746/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGPFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|312282447|dbj|BAJ34089.1| unnamed protein product [Thellungiella halophila]
Length = 1172
Score = 1263 bits (3268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/967 (62%), Positives = 747/967 (77%), Gaps = 23/967 (2%)
Query: 6 NRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYS 65
NR G + P + ++K I Y DA L A FEQS SGKSF+YS
Sbjct: 32 NRREQAQSSGTKSLRPQNQPQSHTDSMSKA---IQQYTVDARLHAVFEQSGESGKSFDYS 88
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E TFRIIGYSEN EML L
Sbjct: 89 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESTFRIIGYSENAREMLGLT 148
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 149 PQSVPSLEKPEILAM-GTDVRSLFTASSSILLERAFVAREITLLNPVWIHS--KNTGKPF 205
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVV
Sbjct: 206 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVV 265
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E RR DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 266 ESVRDLTGYDRVMVYKFHEDEHGEVVAESRRDDLEPYIGLHYPATDIPQASRFLFKQNRV 325
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DCHA PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 326 RMIVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 385
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
++SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 386 DDGSNVAGGRNSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 445
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV PTE+Q+KD
Sbjct: 446 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKD 505
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 506 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 565
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAK HPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 566 KWGGAKRHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 625
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E +SK Q + QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+A
Sbjct: 626 EAALNSKTADGAVQCMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIA 685
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ +++++E++ V+ L+ RAL GEEDKNVE+KL+ F + Q V
Sbjct: 686 ELTGLSVEEAMGKSLVSDLIYKENEETVDKLLSRALRGEEDKNVEVKLKTFSPELQGKAV 745
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+
Sbjct: 746 FVVVNACSSKDYLNNIVGVCFVGQDVTDQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAA 805
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AME +TGW R EVIGKML E+FG+ CR+KG D +TKFMI+L+ I GQ
Sbjct: 806 DENTCCLEWNTAMENLTGWSRSEVIGKMLVGEVFGSCCRLKGPDAITKFMIVLHNAIGGQ 865
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ FPF FF+R+G+FV+ LTA++R +GKVIG FCF+QI P+LQ A+ Q +D +
Sbjct: 866 ETDKFPFPFFDRKGKFVQALLTANKRVSLDGKVIGAFCFVQIPSPELQQAIAVQRRQDTE 925
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+ K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q+LETS +CE+QI I+ MD
Sbjct: 926 CFTKAKELAYICQVIKNPLSGLRFTNSLLEATDLNEDQKQFLETSVSCEKQISRIVSDMD 985
Query: 949 LRCIEEG 955
L IE+G
Sbjct: 986 LEGIEDG 992
>gi|401782504|dbj|BAM36555.1| phytochrome B [Fragaria x ananassa]
Length = 1136
Score = 1263 bits (3267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/944 (64%), Positives = 748/944 (79%), Gaps = 18/944 (1%)
Query: 23 KSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITA 82
++S A + V+K + Y DA L A FEQS SGKSF+YS+S+ S + VPE+QITA
Sbjct: 29 RNSTAAAESVSKA---VAQYTVDARLHAVFEQS-ESGKSFDYSQSMRSTKDSVPEKQITA 84
Query: 83 YLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNG---LIGIDA 139
YLSKIQRGG IQPFGC +AV+E TF +I YSEN ++LD+ +S + +G D
Sbjct: 85 YLSKIQRGGHIQPFGCTIAVDESTFAVIAYSENARDLLDMMPQSVPVMQSREILTVGTDF 144
Query: 140 RTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKS 199
RTLF+P S L +A +REI+LLNPI +HS KPFYAILHRIDVG+VIDLEP++S
Sbjct: 145 RTLFSPSSSTLLEQAFGAREITLLNPIWIHSKISG--KPFYAILHRIDVGVVIDLEPARS 202
Query: 200 GDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDD 259
DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D
Sbjct: 203 EDPALSIAGAVQSQKLAVRAISKLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHED 262
Query: 260 DHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELK 319
+HGEV++E +R+DLEPYLG+H+PA DIPQA+RFLFKQNRVRMI DCHA PV VIQ + L
Sbjct: 263 EHGEVLAESKRADLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVQVIQDEGLM 322
Query: 320 QPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHH 371
QPLCLV STLR+PHGCH QYM NMGSIASL +AVIIN D SM+LWGLVVCHH
Sbjct: 323 QPLCLVGSTLRAPHGCHSQYMANMGSIASLALAVIINGNDDEAIGGRSSMRLWGLVVCHH 382
Query: 372 TSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIV 431
TS R IPFPLRYACEFL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLRD P IV
Sbjct: 383 TSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQLLEKHVLRTQTLLCDMLLRDTPTGIV 442
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
TQSPSIM+LVKCDGAALYY + + VGVTPTE+Q+KDI WLL++HG TGLSTDSL +A
Sbjct: 443 TQSPSIMNLVKCDGAALYYQDKYYPVGVTPTEAQIKDIVEWLLSSHGTSTGLSTDSLGDA 502
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG AVCGMA A IT +DFLFWFRSHTAKEVKWGGAKHHPE KD+G +MHPRSS
Sbjct: 503 GYPGAASLGDAVCGMAAAYITKRDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSS 562
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVD 611
FKAFLEVVK+RS PW+ +E++AIHSLQI++RDSF++ E N V N Q ++QG+D
Sbjct: 563 FKAFLEVVKSRSLPWDNAEMDAIHSLQIILRDSFKDAETNNLKAVTEN-QHGDLEIQGID 621
Query: 612 ELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEE 671
ELSSVA EMVRLIETATAPIF VD +G INGWNAK+AELTGL EA GKSL+ ++V++E
Sbjct: 622 ELSSVAREMVRLIETATAPIFAVDVNGCINGWNAKIAELTGLAVEEATGKSLVHDLVYKE 681
Query: 672 SQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVG 731
S+ V+ L+ AL GEEDKNVE+KLR F + + V+++VNAC+S+DY NN+ GVCFVG
Sbjct: 682 SEEIVDKLLIHALRGEEDKNVEIKLRTFGPEHDNKPVFVVVNACSSKDYTNNIVGVCFVG 741
Query: 732 QDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHE 791
QD+T +KV+MDKFI +QGDY+AI+ S NPLIPPIFASD+N CCSEWN AMEK+TGW R +
Sbjct: 742 QDVTGQKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCSEWNNAMEKLTGWSRGD 801
Query: 792 VIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
+IGKML EIFG+ CR+KG D +TKFMI+L+ I G T+ FPF FF+R G++V+ LTA
Sbjct: 802 MIGKMLVGEIFGSCCRLKGPDAITKFMIVLHNAIGGSDTDKFPFSFFDRNGKYVQALLTA 861
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
+RR + +G+VIG FCF+QI P+LQ AL Q ++ +A++KELAY+ QE+K+PL+GIR
Sbjct: 862 NRRVNVDGQVIGAFCFLQIPSPELQQALRVQRQQEKQCFARMKELAYMCQEIKSPLSGIR 921
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F + LL + +SE+Q+Q+LETS ACE+QI+ II +DL IE+G
Sbjct: 922 FTNSLLGGTELSEDQKQFLETSAACEKQILKIIKDVDLASIEDG 965
>gi|78643878|emb|CAJ21302.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1262 bits (3266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/967 (63%), Positives = 748/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ C++KG + LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCKLKGPNSLTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643858|emb|CAJ21292.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1262 bits (3266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/967 (63%), Positives = 744/967 (76%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKDSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH YM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|358248221|ref|NP_001240097.1| phytochrome B-like [Glycine max]
gi|312231793|gb|ACE79198.2| phytochrome B-1 [Glycine max]
Length = 1137
Score = 1262 bits (3266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/930 (64%), Positives = 741/930 (79%), Gaps = 16/930 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS SG+SFNYS S+ E VPE+QITAYL KIQRGG IQPFG
Sbjct: 42 IAQYTEDARLHAVFEQSGESGRSFNYSESIRIASESVPEQQITAYLVKIQRGGFIQPFGS 101
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAK 153
M+AV+EP+FRI+GYS+N +ML + +S + + +G D R LFT S L K
Sbjct: 102 MIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGTDVRALFTHSSALLLEK 161
Query: 154 AAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQ 213
A ++REISL+NPI +HS R+ KPFY ILHRIDVGIVIDLEP+++ DPALS+AGAVQSQ
Sbjct: 162 AFSAREISLMNPIWIHS--RTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQ 219
Query: 214 KLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDL 273
KLAV AIS+LQ+LPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVVSE +R DL
Sbjct: 220 KLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKRPDL 279
Query: 274 EPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPH 333
EPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA V V+Q + L QPLCLV STLR+PH
Sbjct: 280 EPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPH 339
Query: 334 GCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYAC 385
GCH QYM NMGSIASLVMAVIIN D SM+LWGLVVCHHTS R IPFPLRYAC
Sbjct: 340 GCHAQYMANMGSIASLVMAVIINGNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPLRYAC 399
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL+QAF LQL MELQ+A Q EK +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDG
Sbjct: 400 EFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDG 459
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALY+ G + +GVTPTE+Q++DI WLL HGD TGLSTDSL +AGYPGAA LG AVCG
Sbjct: 460 AALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGAASLGDAVCG 519
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS P
Sbjct: 520 MAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLP 579
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
WE +E++AIHSLQ+++RDSF++ E N SK + + ++QGVDELSSVA EMVRLIE
Sbjct: 580 WENAEMDAIHSLQLILRDSFKDAEHRN-SKAVVDPHVSEQELQGVDELSSVAREMVRLIE 638
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TATAPIF VD G +NGWNAKV+ELTGLP EAMGKSL+ ++V +ES+ + L+ RAL
Sbjct: 639 TATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETMNKLLSRALK 698
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
GEEDKNVE+K+R F + Q+ V+++VNAC+S+D+ NNV GVCFVGQD+T +K++MDKFI
Sbjct: 699 GEEDKNVEIKMRTFGPEHQNKAVFLVVNACSSKDFTNNVVGVCFVGQDVTGQKIVMDKFI 758
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF 805
+QGDY+AI+ S NPLIPPIFASD+N CC EWN AMEK+TGW R +VIGKML E+FG+
Sbjct: 759 NIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRVDVIGKMLVGEVFGSC 818
Query: 806 CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCF 865
C++KG D +TKFMI+L+ + GQ T+ FPF F +R G++V+ LTA++R + EG++IG F
Sbjct: 819 CQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVNMEGQIIGAF 878
Query: 866 CFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN 925
CF+QI+ P+LQ AL+AQ ++ + + ++KELAYI Q VKNPL+GIRF + LLE++S++
Sbjct: 879 CFLQIMSPELQQALKAQRQQEKNSFGRMKELAYICQGVKNPLSGIRFTNSLLEATSLTNE 938
Query: 926 QRQYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+Q+LETS ACE+Q++ II +DL IE+G
Sbjct: 939 QKQFLETSVACEKQMLKIIRDVDLESIEDG 968
>gi|78643890|emb|CAJ21308.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1261 bits (3264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/937 (64%), Positives = 738/937 (78%), Gaps = 16/937 (1%)
Query: 31 PVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRG 90
P I Y DA L A FEQS +GKSF+YS+SV +P + VPEEQITAYLSKIQRG
Sbjct: 31 PTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRG 90
Query: 91 GLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPP 146
G IQPFGCM+A +E +FR+I YSEN +ML L +S E E+ +G D R LF P
Sbjct: 91 GHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEIL-FVGADVRILFRPS 149
Query: 147 SGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSL 206
S L KA +REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+
Sbjct: 150 SAVLLEKAFGAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSI 207
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVV+ V++LTGYDRVM+Y FH+D+HGEVV+
Sbjct: 208 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVA 267
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
E +R DLEPY+G+H+P+ DIPQA+RFLFKQNRVRMI DCHAIPV VIQ + L QPLCLV
Sbjct: 268 ENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVSVIQDEGLMQPLCLVG 327
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIP 378
STLR+PHGCH QYM NMGSIASL MAVII D SM+LWGLVVCHHTS R IP
Sbjct: 328 STLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIP 387
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLRD+P IVTQSPSIM
Sbjct: 388 FPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIM 447
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA
Sbjct: 448 DLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAF 507
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG AVCGMA A I +DFLFWFRSHTAKEVKWGGAKHHPE KD+G +MHPRSSFKAFLEV
Sbjct: 508 LGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 567
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK+RS PWE +E++AIHSLQ+++RDSF++ E N V N Q ++QG+DELSSVA
Sbjct: 568 VKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHN-QLKDMELQGMDELSSVAR 626
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETATAPIF VD G INGWNAKVAELTGL EAMGKSL+ ++V++E + V+
Sbjct: 627 EMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDK 686
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
LI RA+ GEEDKNVE+KLR F + Q V+++VNAC+S+DY +N+ GVCFVGQD+T +K
Sbjct: 687 LIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDNIVGVCFVGQDVTGQK 746
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
V+MDK++ +QGDY+AI+ S NP IPPIFASDEN CC EWN A+EK+TGW R EV+GKML
Sbjct: 747 VVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEKLTGWSRGEVVGKMLV 806
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FG+ C++KG D LTKFMI L+ I G T+ PF FF+R + V+ LTA++R + +
Sbjct: 807 GEVFGSCCKLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMK 866
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
G +IG FCF+QI P+LQP+L+ Q ++ +A++KELAYI QE+KNPL+GI F + LLE
Sbjct: 867 GDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLE 926
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
++ ++E+Q+Q+LETS ACE+QI+ II +DL IE G
Sbjct: 927 NTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENG 963
>gi|78643876|emb|CAJ21301.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1261 bits (3264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/967 (63%), Positives = 746/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW + EV+GKML E+FGN C++KG + LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSKGEVVGKMLVGEVFGNCCKLKGPNALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643938|emb|CAJ21332.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1261 bits (3264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/967 (63%), Positives = 747/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ F FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLTFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643904|emb|CAJ21315.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1261 bits (3263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/967 (63%), Positives = 745/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL ME Q+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMEFQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R +V+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGQVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|224108734|ref|XP_002314949.1| phytochrome B2 [Populus trichocarpa]
gi|10954093|gb|AAG25726.1|AF309807_1 phytochrome B2 [Populus trichocarpa]
gi|222863989|gb|EEF01120.1| phytochrome B2 [Populus trichocarpa]
Length = 1146
Score = 1261 bits (3263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/929 (65%), Positives = 736/929 (79%), Gaps = 16/929 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS +G+SF+YS+SV + + VPE+QITAYLSKIQRGG IQPFGC
Sbjct: 39 IAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVPEQQITAYLSKIQRGGHIQPFGC 98
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
M+A +E +FR+I YSEN +ML L +S E E+ +G D R LF P S L KA
Sbjct: 99 MIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKA 157
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQK
Sbjct: 158 FGAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQK 215
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AIS+LQ+LPGGDI LLCDTVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLE
Sbjct: 216 LAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLE 275
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY+G+H+P+ DIPQA+RFLFKQNRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHG
Sbjct: 276 PYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAPHG 335
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYACE 386
CH QYM NMGSIASL MAVII D SM+LWGLVVCHHTS R IPFPLRYACE
Sbjct: 336 CHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACE 395
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGA
Sbjct: 396 FLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGA 455
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA LG AVCGM
Sbjct: 456 ALYYQGQYYPLGVTPTETQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGM 515
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A I +DFLFWFRSHTAKEVKWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PW
Sbjct: 516 AVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 575
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
E +E++AIHSLQ+++RDSF++ E N SK +TQ ++QG+DELSSVA EMVRLIET
Sbjct: 576 ENAEMDAIHSLQLILRDSFRDAEATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIET 634
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
ATAPIF VD G INGWNAKVAELTGL EAMGKSL+ ++V++E + V+ LI RA+ G
Sbjct: 635 ATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKG 694
Query: 687 EEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIR 746
EEDKNVE+KLR F + Q V+++VNAC+S+DY +N+ GVCFVGQDIT +KV+MDK++
Sbjct: 695 EEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDNIVGVCFVGQDITGQKVVMDKYVL 754
Query: 747 LQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFC 806
+QGDY+AI+ S NP IPPIFASDEN CC EWN AMEK+TGW R EV+GKML E+FG+ C
Sbjct: 755 IQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCC 814
Query: 807 RMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFC 866
R+KG D LTKFMI L+ I G T+ PF FF+R + V+ LTA++R + EG +IG FC
Sbjct: 815 RLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFC 874
Query: 867 FMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQ 926
F+QI P+LQ L+ Q ++ +A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q
Sbjct: 875 FLQIASPELQQTLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQ 934
Query: 927 RQYLETSDACERQIMTIIDGMDLRCIEEG 955
+Q+LETS ACE+QI+ II +DL IE G
Sbjct: 935 QQFLETSAACEKQILKIIRDIDLESIENG 963
>gi|78643892|emb|CAJ21309.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1261 bits (3263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/967 (63%), Positives = 745/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ D ALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDSALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643934|emb|CAJ21330.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1261 bits (3263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/967 (63%), Positives = 744/967 (76%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+ QP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGPFCFLQIASPEFQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643930|emb|CAJ21328.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1260 bits (3260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/967 (63%), Positives = 747/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EA+GKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAVGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ F FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLTFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643922|emb|CAJ21324.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1260 bits (3260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/967 (63%), Positives = 745/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ F FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLTFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643888|emb|CAJ21307.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1259 bits (3258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/967 (63%), Positives = 746/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + +PEEQITAYLSKIQRGG IQPFGCM A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSLPEEQITAYLSKIQRGGHIQPFGCMSAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIGLHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI +LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASLELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643902|emb|CAJ21314.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1259 bits (3258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/967 (63%), Positives = 745/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI +LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASLELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643868|emb|CAJ21297.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1259 bits (3258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/967 (63%), Positives = 747/967 (77%), Gaps = 18/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +IG FCF+QI+ P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNM--NIIGAFCFLQIVSPELQPSLKVQKQQEKK 894
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 895 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 954
Query: 949 LRCIEEG 955
L IE G
Sbjct: 955 LESIENG 961
>gi|78643920|emb|CAJ21323.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1259 bits (3258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/967 (63%), Positives = 745/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+ IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643932|emb|CAJ21329.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1259 bits (3257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/967 (63%), Positives = 743/967 (76%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFK
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKH 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH YM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFERNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|356555997|ref|XP_003546314.1| PREDICTED: phytochrome B-like isoform 1 [Glycine max]
Length = 1149
Score = 1259 bits (3257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/937 (64%), Positives = 743/937 (79%), Gaps = 16/937 (1%)
Query: 32 VNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGG 91
++ I Y DA L A FEQS SG+SF+YS+S+ E VPE+QITAYL KIQRGG
Sbjct: 47 IDSTSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRVTSESVPEQQITAYLLKIQRGG 106
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPP 146
IQPFG M+AV+EP+FRI+ YS+N +ML + +S + + +G D RTLFT
Sbjct: 107 FIQPFGSMIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHS 166
Query: 147 SGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSL 206
S L KA ++REISL+NPI +HS R+ KPFY ILHRIDVGIVIDLEP+++ DPALS+
Sbjct: 167 SAVLLEKAFSAREISLMNPIWIHS--RTSGKPFYGILHRIDVGIVIDLEPARTEDPALSI 224
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
AGAVQSQKLAV AIS+LQ+LPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+
Sbjct: 225 AGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVA 284
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA V V+Q + L QPLCLV
Sbjct: 285 ETKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVG 344
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIP 378
STLR+PHGCH QYM NMGS ASLVMAVIIN D SM+LWGLVVCHHTS R IP
Sbjct: 345 STLRAPHGCHAQYMANMGSTASLVMAVIINGNDEEGVGGRTSMRLWGLVVCHHTSARCIP 404
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+QAF LQL MELQ+A Q EK +LRTQ LLCDMLLRD+P IVTQSPSIM
Sbjct: 405 FPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIM 464
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY G + +GVTPTE+Q++DI WLL H D TGLSTDSLA+AGYPGAA
Sbjct: 465 DLVKCDGAALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAAS 524
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG AVCGMA A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEV
Sbjct: 525 LGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 584
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK+RS PWE +E++AIHSLQ+++RDSF++ E N SK + + + ++QGVDELSSVA
Sbjct: 585 VKSRSLPWENAEMDAIHSLQLILRDSFKDAEHSN-SKAVLDPRMSELELQGVDELSSVAR 643
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETATAPIF VD G INGWNAKV+ELTGLP EAMGKSL+ ++V +ES+ V+
Sbjct: 644 EMVRLIETATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDK 703
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
L+ RAL GEEDKNVE+K+R F + Q+ V+++VNAC+S+DY NNV GVCFVGQD+T +K
Sbjct: 704 LLSRALKGEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQK 763
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
++MDKFI +QGDY+AI+ + NPLIPPIFASD+N CC EWN AMEK+TGW R +VIGKML
Sbjct: 764 IVMDKFINIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLV 823
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FG+ C++KG D +TKFMI+L+ + G T+ FPF F +R G+ V+ LTA++R + +
Sbjct: 824 GEVFGSCCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMD 883
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
G++IG FCF+QI+ P+LQ AL+AQ ++ + +A++KELAYI Q VKNPL+GIRF + LLE
Sbjct: 884 GQIIGAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLE 943
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
++ +S Q+Q+LETS ACE+Q++ II +D+ IE+G
Sbjct: 944 ATCLSNEQKQFLETSAACEKQMLKIIHDVDIESIEDG 980
>gi|78643864|emb|CAJ21295.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1259 bits (3257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/937 (65%), Positives = 738/937 (78%), Gaps = 18/937 (1%)
Query: 31 PVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRG 90
P I Y DA L A FEQS +GKSF+YS+SV +P + VPEEQITAYLSKIQRG
Sbjct: 31 PTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRG 90
Query: 91 GLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPP 146
G IQPFGCM+A +E +FR+I YSEN +ML L +S E E+ +G D R LF P
Sbjct: 91 GHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEIL-FVGADVRILFRPS 149
Query: 147 SGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSL 206
S L KA +REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+
Sbjct: 150 SAVLLEKAFGAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSI 207
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVV+ V++LTGYDRVM+Y FH+D+HGEVV+
Sbjct: 208 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVA 267
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
E +R DLEPY+G+H+P+ DIPQA+RFLFKQNRVRMI DCHAIPV VIQ + L QPLCLV
Sbjct: 268 ENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVSVIQDEGLMQPLCLVG 327
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIP 378
STLR+PHGCH QYM NMGSIASL MAVII D SM+LWGLVVCHHTS R IP
Sbjct: 328 STLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIP 387
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLRD+P IVTQSPSIM
Sbjct: 388 FPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIM 447
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA
Sbjct: 448 DLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAF 507
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG AVCGMA A I +DFLFWFRSHTAKEVKWGGAKHHPE KD+G +MHPRSSFKAFLEV
Sbjct: 508 LGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 567
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK+RS PWE +E++AIHSLQ+++RDSF++ E N SK +TQ ++QG+DELSSVA
Sbjct: 568 VKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAVVHTQLKDMELQGMDELSSVAR 626
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETATAPIF VD G INGWNAKVAELTGL EAMGKSL+ ++V++E + V+
Sbjct: 627 EMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDK 686
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
LI RA+ GEEDKNVE+KLR F + Q V+++VNAC+S+DY +N+ GVCFVGQD+T +K
Sbjct: 687 LIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDNIVGVCFVGQDVTGQK 746
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
V+MDK++ +QGDY+AI+ S NP IPPIFASDEN CC EWN AMEK+TGW R EV+GKML
Sbjct: 747 VVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEKLTGWSRGEVVGKMLV 806
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FG+ CR+KG D LTKFMI L+ I G T+ PF FF+R + V+ LTA++R +
Sbjct: 807 GEVFGSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNI- 865
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
+IG FCF+QI P+LQP+L+ Q ++ +A++KELAYI QE+KNPL+GI F + LLE
Sbjct: 866 -NIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLE 924
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
++ ++E+Q+Q+LETS ACE+QI+ II +DL IE G
Sbjct: 925 NTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENG 961
>gi|78643860|emb|CAJ21293.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1258 bits (3256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/967 (63%), Positives = 745/967 (77%), Gaps = 18/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAANEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNM--NIIGAFCFLQIASPELQPSLKVQKQQEKK 894
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 895 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 954
Query: 949 LRCIEEG 955
L IE G
Sbjct: 955 LESIENG 961
>gi|78643866|emb|CAJ21296.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1258 bits (3256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/967 (63%), Positives = 746/967 (77%), Gaps = 18/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKK 894
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 895 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 954
Query: 949 LRCIEEG 955
L IE G
Sbjct: 955 LESIENG 961
>gi|78643874|emb|CAJ21300.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1258 bits (3256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/967 (63%), Positives = 746/967 (77%), Gaps = 18/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNM--NIIGAFCFLQIASPELQPSLKVQKQQEKK 894
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 895 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 954
Query: 949 LRCIEEG 955
L IE G
Sbjct: 955 LESIENG 961
>gi|240119405|dbj|BAH79251.1| phytochrome B [Cardamine resedifolia]
Length = 1184
Score = 1258 bits (3256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/937 (64%), Positives = 741/937 (79%), Gaps = 23/937 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEG--VPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + G VPE+QITAYLS+IQRGG IQPF
Sbjct: 67 IQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGFIQPF 126
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GCM+AV+E TFRIIGYSEN EML L +S E E+ + G D R+LF P S L
Sbjct: 127 GCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKPEILAM-GTDVRSLFAPSSSILLE 185
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNP+ +HS ++ KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQS
Sbjct: 186 RAFVAREITLLNPVWIHS--KNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQS 243
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AISRLQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R D
Sbjct: 244 QKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDD 303
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV+++Q L Q +CLV STLR+P
Sbjct: 304 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLLVQDDRLSQSMCLVGSTLRAP 363
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCHHTSPRYIPFPL 381
HGCH QYM NMGSIASL MAVIIN ++SMKLWGLVVCHHTS R IPFPL
Sbjct: 364 HGCHSQYMANMGSIASLAMAVIINGNEEDGRNAGGGRNSMKLWGLVVCHHTSSRCIPFPL 423
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
RYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQSPSIMDLV
Sbjct: 424 RYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLV 483
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAA Y G+ + +GV PTE+Q+KDI WLL NH D TGLSTDSL +AGYPGAA LG
Sbjct: 484 KCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADSTGLSTDSLGDAGYPGAAALGD 543
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+
Sbjct: 544 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 603
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK-VQGNTQ--QNGSKMQGVDELSSVAC 618
RS PWE +E++AIHSLQ+++RDSF+E E +SK V G Q ++ S QG+DEL +VA
Sbjct: 604 RSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAVQPCRDMSGEQGIDELGAVAR 663
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ +++++E++ V
Sbjct: 664 EMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNK 723
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
L+ RAL GEEDKNVELKL+ F + Q V+++VNAC+S+DY NN+ GVCFVGQD+T +K
Sbjct: 724 LLSRALKGEEDKNVELKLKTFSPELQGKAVFMIVNACSSKDYLNNIVGVCFVGQDVTGQK 783
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN C EWNAA+EK+TG R EVIGKML
Sbjct: 784 IVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTICLEWNAALEKLTGVSRGEVIGKMLV 843
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FGN CR+KG D LT+FMI+L+ I GQ T+ FPF FF+R G+FV+ LTA++R +
Sbjct: 844 GEVFGNCCRLKGPDALTRFMIVLHNAIGGQETDKFPFPFFDRNGKFVQALLTANKRVSLD 903
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
GKVIG FCF+QI P+LQ AL Q +D + + K KELAYI Q +K+PL+G+RF + LLE
Sbjct: 904 GKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKELAYICQVIKSPLSGLRFANSLLE 963
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+++++E+Q+Q+LETS +CE+QI I+ MDL IE+G
Sbjct: 964 ATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIEDG 1000
>gi|312231795|gb|ACE79199.2| phytochrome B-2 [Glycine max]
Length = 1149
Score = 1258 bits (3255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/937 (64%), Positives = 743/937 (79%), Gaps = 16/937 (1%)
Query: 32 VNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGG 91
++ I Y DA L A FEQS SG+SF+YS+S+ E VPE+QITAYL KIQRGG
Sbjct: 47 IDSTSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRVTSESVPEQQITAYLLKIQRGG 106
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPP 146
IQPFG M+AV+EP+FRI+ YS+N +ML + +S + + +G D RTLFT
Sbjct: 107 FIQPFGSMIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHS 166
Query: 147 SGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSL 206
S L KA ++REISL+NPI +HS R+ KPFY ILHRIDVGIVIDLEP+++ DPALS+
Sbjct: 167 SAVLLEKAFSAREISLMNPIWIHS--RTSGKPFYGILHRIDVGIVIDLEPARTEDPALSI 224
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
AGAVQSQKLAV AIS+LQ+LPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+
Sbjct: 225 AGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVA 284
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA V V+Q + L QPLCLV
Sbjct: 285 ETKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVG 344
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIP 378
STLR+PHGCH QYM NMGS ASLVMAVIIN D SM+LWGLV+CHHTS R IP
Sbjct: 345 STLRAPHGCHAQYMANMGSTASLVMAVIINGNDEEGVGGRTSMRLWGLVICHHTSARCIP 404
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+QAF LQL MELQ+A Q EK +LRTQ LLCDMLLRD+P IVTQSPSIM
Sbjct: 405 FPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIM 464
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY G + +GVTPTE+Q++DI WLL H D TGLSTDSLA+AGYPGAA
Sbjct: 465 DLVKCDGAALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAAS 524
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG AVCGMA A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEV
Sbjct: 525 LGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 584
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK+RS PWE +E++AIHSLQ+++RDSF++ E N SK + + + ++QGVDELSSVA
Sbjct: 585 VKSRSLPWENAEMDAIHSLQLILRDSFKDAEHSN-SKAVLDPRMSELELQGVDELSSVAR 643
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETATAPIF VD G INGWNAKV+ELTGLP EAMGKSL+ ++V +ES+ V+
Sbjct: 644 EMVRLIETATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDK 703
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
L+ RAL GEEDKNVE+K+R F + Q+ V+++VNAC+S+DY NNV GVCFVGQD+T +K
Sbjct: 704 LLSRALKGEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQK 763
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
++MDKFI +QGDY+AI+ + NPLIPPIFASD+N CC EWN AMEK+TGW R +VIGKML
Sbjct: 764 IVMDKFINIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLV 823
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FG+ C++KG D +TKFMI+L+ + G T+ FPF F +R G+ V+ LTA++R + +
Sbjct: 824 GEVFGSCCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMD 883
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
G++IG FCF+QI+ P+LQ AL+AQ ++ + +A++KELAYI Q VKNPL+GIRF + LLE
Sbjct: 884 GQIIGAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLE 943
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
++ +S Q+Q+LETS ACE+Q++ II +D+ IE+G
Sbjct: 944 ATCLSNEQKQFLETSAACEKQMLKIIHDVDIESIEDG 980
>gi|78643936|emb|CAJ21331.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1258 bits (3254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/937 (64%), Positives = 737/937 (78%), Gaps = 16/937 (1%)
Query: 31 PVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRG 90
P I Y DA L A FEQS +GKSF+YS+SV +P + VPEEQITAYLSKIQRG
Sbjct: 31 PTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRG 90
Query: 91 GLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPP 146
G IQPFGCM+A +E +FR+I YSEN +ML L +S E E+ +G D R LF P
Sbjct: 91 GHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEIL-FVGADVRILFRPS 149
Query: 147 SGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSL 206
S L KA +REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+
Sbjct: 150 SAVLLEKAFGAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSI 207
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVV+ V++LTGYDRVM+Y FH+D+HGEVV+
Sbjct: 208 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVA 267
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
E +R DLEPY+G+H+P+ DIPQA+RFLFK NRVRMI DCHAIPV VIQ + L QPLCLV
Sbjct: 268 ENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRMIVDCHAIPVSVIQDEGLMQPLCLVG 327
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIP 378
STLR+PHGCH QYM NMGSIASL MAVII D SM+LWGLVVCHHTS R IP
Sbjct: 328 STLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIP 387
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLRD+P IVTQSPSIM
Sbjct: 388 FPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIM 447
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA
Sbjct: 448 DLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAF 507
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG AVCGMA A I +DFLFWFRSHTAKEVKWGGAKHHPE KD+G +MHPRSSFKAFLEV
Sbjct: 508 LGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 567
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK+RS PWE +E++AIHSLQ+++RDSF++ E N V N Q ++QG+DELSSVA
Sbjct: 568 VKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHN-QLKDMELQGMDELSSVAR 626
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETATAPIF VD G INGWNAKVAELTGL EAMGKSL+ ++V++E + V+
Sbjct: 627 EMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDK 686
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
LI RA+ GEEDKNVE+KLR F + Q V+++VNAC+S+DY +N+ GVCFVGQD+T +K
Sbjct: 687 LIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDNIVGVCFVGQDVTGQK 746
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
V+MDK++ +QGDY+AI+ S NP IPPIFASDEN CC EWN A+EK+TGW R EV+GKML
Sbjct: 747 VVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEKLTGWSRGEVVGKMLV 806
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FG+ C++KG + LTKFMI L+ I G T+ PF FF+R + V+ LTA++R + +
Sbjct: 807 GEVFGSCCKLKGPNSLTKFMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMK 866
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
G +IG FCF+QI P+LQP+L+ Q ++ +A++KELAYI QE+KNPL+GI F + LLE
Sbjct: 867 GDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLE 926
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
++ ++E+Q+Q+LETS ACE+QI+ II +DL IE G
Sbjct: 927 NTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENG 963
>gi|78643946|emb|CAJ21336.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1258 bits (3254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/937 (65%), Positives = 738/937 (78%), Gaps = 16/937 (1%)
Query: 31 PVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRG 90
P I Y DA L A FEQS +GKSF+YS+SV +P + VPEEQITAYLSKIQRG
Sbjct: 31 PTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVPEEQITAYLSKIQRG 90
Query: 91 GLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPP 146
G IQPFGCM+A +E +FR+I YSEN +ML L +S E E+ +G D R LF P
Sbjct: 91 GHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEIL-FVGADVRILFRPS 149
Query: 147 SGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSL 206
S L KA +REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+
Sbjct: 150 SAVLLEKAFGAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSI 207
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVV+ V++LTGYDRVM+Y FH+D+HGEVV+
Sbjct: 208 AGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVA 267
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
E +R DLEPY+G+H+P+ DIPQA RFLFKQNRVRMI DCHAIPV VIQ + L QPLCLV
Sbjct: 268 ENKRVDLEPYIGLHYPSTDIPQAPRFLFKQNRVRMIVDCHAIPVSVIQDEGLMQPLCLVG 327
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIP 378
STLR+PHGCH QYM NMGSIASL MAVII D SM+LWGLVVCHHTS R IP
Sbjct: 328 STLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIP 387
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLRD+P IVTQSPSIM
Sbjct: 388 FPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIM 447
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA
Sbjct: 448 DLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAF 507
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG AVCGMA A I +DFLFWFRSHTAKEVKWGGAKHHPE KD+G +MHPRSSFKAFLEV
Sbjct: 508 LGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 567
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK+RS PWE +E++AIHSLQ+++RDSF++ E N SK +TQ ++QG+DELSSVA
Sbjct: 568 VKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAVVHTQLKDMELQGMDELSSVAR 626
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETATAPIF VD G INGWNAKVAELTGL EAMGKSL+ ++V++E + V+
Sbjct: 627 EMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDK 686
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
LI RA+ GEEDKNVE+KLR F + Q V+++VNAC+S+DY +N+ GVCFVGQD+T +K
Sbjct: 687 LIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDNIVGVCFVGQDVTGQK 746
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
V+MDK++ +QGDY+AI+ S NP IPPIFASDEN CC EWN A+EK+TGW R EV+GKML
Sbjct: 747 VVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTALEKLTGWSRGEVVGKMLV 806
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FG+ CR+KG D LTKFMI L+ I G T+ PF FF+R + V+ LTA++R + +
Sbjct: 807 GEVFGSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNIK 866
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
G +IG FCF+QI P+LQ +L+ Q ++ +A++KELAYI QE+KNPL+GI F + LLE
Sbjct: 867 GDIIGPFCFLQIASPELQQSLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLE 926
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
++ ++E+Q+Q+LETS ACE+QI+ II +DL IE G
Sbjct: 927 NTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENG 963
>gi|121309520|dbj|BAF44083.1| phytochrome b [Lotus japonicus]
Length = 1143
Score = 1258 bits (3254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/936 (63%), Positives = 748/936 (79%), Gaps = 22/936 (2%)
Query: 36 KTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQP 95
+ I Y DA L A +EQS G+SF+YS S+ E VPE+QITAYL++IQRGG IQP
Sbjct: 44 RKAIAQYTEDARLHAVYEQS---GESFDYSHSLRVTVESVPEQQITAYLARIQRGGYIQP 100
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRS------EDFELNGLIGIDARTLFTPPSGA 149
FGCM+AV++P+FR++ YS+N +ML + +S + + +G D R+LF+P S
Sbjct: 101 FGCMIAVDDPSFRLLAYSDNARDMLGITPQSVPSIDDDSSSSSFALGTDVRSLFSPSSAV 160
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
L KA A+REISL+NP+ +HS R+ +PFY ILHR+DVG+VIDLEP++S DPALS+AGA
Sbjct: 161 LLDKAFAAREISLMNPLWIHS--RTSGRPFYGILHRVDVGVVIDLEPARSDDPALSIAGA 218
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AIS+LQ+LPGGD+ LLCD VV+ V++LTGYDRVM+Y FH+D+HGEVV+E +
Sbjct: 219 VQSQKLAVRAISQLQSLPGGDVKLLCDAVVQSVRELTGYDRVMVYKFHEDEHGEVVAESK 278
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
R+DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV V+Q + L QPLCLV STL
Sbjct: 279 RADLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVGVVQDEALMQPLCLVGSTL 338
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKLWGLVVCHHTSPRYIPF 379
R+PHGCH QYM NMGSIASLVMAVIIN D SM+LWGLVVCHHTS R IPF
Sbjct: 339 RAPHGCHAQYMANMGSIASLVMAVIINGNDDDAVGVGGRSSMRLWGLVVCHHTSARCIPF 398
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A Q EK +LRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 399 PLRYACEFLMQAFGLQLNMELQMAAQSLEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 458
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALY G + +GVTP+ESQ++DI WLL HGD TGLSTDSLA+AGYPGA+ L
Sbjct: 459 LVKCDGAALYCQGSYYPLGVTPSESQIRDIIDWLLAFHGDSTGLSTDSLADAGYPGASSL 518
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 519 GDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 578
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
K+RS PW+ +E++AIHSLQ+++RDSF+E +E +DSK NT ++QGVDELSSVA E
Sbjct: 579 KSRSSPWDNAEMDAIHSLQLILRDSFKE-DEHSDSKAVVNTHLAELELQGVDELSSVARE 637
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRLIETATAPIF VD G INGWNAKV+ELTGLP EAMGKSL+ ++V++ES+ V+ L
Sbjct: 638 MVRLIETATAPIFAVDVEGHINGWNAKVSELTGLPVEEAMGKSLVRDLVYKESEETVDRL 697
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKV 739
+ RAL GEEDKNVE+KLR F + Q VY++VNAC+S+DY NN+ GVCFVGQD+T +KV
Sbjct: 698 LSRALKGEEDKNVEIKLRTFGPEHQDKAVYVVVNACSSKDYTNNIVGVCFVGQDVTGQKV 757
Query: 740 LMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPR 799
+MDKFI +QGDY+AI+ S NPLIPPIFASD+N CC EWN AMEK+TGW R +VIGK+L
Sbjct: 758 VMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLTGWGRADVIGKLLVG 817
Query: 800 EIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEG 859
E+FG+ C++KG D +TKFMI+L+ + GQ T+ FPF F +R G++V+ LTA++R +G
Sbjct: 818 EVFGSCCQLKGSDAITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRVSIDG 877
Query: 860 KVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLES 919
++IG FCF+QI+ P+LQ AL+ Q ++ + +A++KELAYI QEVKNPL+GIRF + LLE+
Sbjct: 878 QIIGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEA 937
Query: 920 SSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+ +++ Q+Q+LETS ACE+Q++ II +DL IE+G
Sbjct: 938 TGLTDEQKQFLETSAACEKQMLKIIRDVDLESIEDG 973
>gi|78643924|emb|CAJ21325.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1257 bits (3253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/967 (63%), Positives = 742/967 (76%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEHSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH YM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF R + V+ LTA++R + +G +IG FCF QI P+ QP+L+ Q ++
Sbjct: 837 DTDKLPFSFFERNEKNVQTLLTANKRVNIKGDIIGPFCFFQIASPEFQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643870|emb|CAJ21298.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1257 bits (3253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/967 (63%), Positives = 744/967 (76%), Gaps = 18/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKK 894
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 895 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 954
Query: 949 LRCIEEG 955
L IE G
Sbjct: 955 LESIENG 961
>gi|78643940|emb|CAJ21333.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1255 bits (3248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/967 (63%), Positives = 743/967 (76%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAANEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH YM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ C++KG + LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCKLKGPNSLTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643926|emb|CAJ21326.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1255 bits (3248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/967 (63%), Positives = 743/967 (76%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+ GAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSITGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRGLTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+ IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ C++KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCKLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|78643872|emb|CAJ21299.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1255 bits (3247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/967 (63%), Positives = 745/967 (77%), Gaps = 18/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +IG FCF+QI +LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASLELQPSLKVQKQQEKK 894
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 895 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 954
Query: 949 LRCIEEG 955
L IE G
Sbjct: 955 LESIENG 961
>gi|78643928|emb|CAJ21327.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1255 bits (3247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/967 (63%), Positives = 742/967 (76%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSTTCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+ IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF QI P+ QP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGPFCFFQIASPEFQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|388458330|gb|AFK31031.1| phytochrome b, partial [Oryza rufipogon]
gi|388458368|gb|AFK31050.1| phytochrome b, partial [Oryza rufipogon]
gi|388458370|gb|AFK31051.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1254 bits (3246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/945 (64%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|57791642|gb|AAW56589.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 1254 bits (3244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 20 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 77
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L
Sbjct: 78 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLM 137
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 138 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 194
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 195 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 254
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 255 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 314
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 315 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 374
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 375 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 434
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 435 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 494
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 495 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 554
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 555 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 614
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 615 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 674
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 675 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 734
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 735 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 794
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 795 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 854
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 855 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 914
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI II
Sbjct: 915 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIIG 974
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 975 DMDLESIEDGSFVL 988
>gi|388458362|gb|AFK31047.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1254 bits (3244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/945 (64%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSDASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|78643882|emb|CAJ21304.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1254 bits (3244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/967 (63%), Positives = 745/967 (77%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSTTCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N SK +TQ ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG + LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPNALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ F FF+R + V+ LTA++R + +G +IG FCF+QI +LQP+L+ Q ++
Sbjct: 837 DTDKLTFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASLELQPSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|388458276|gb|AFK31004.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1253 bits (3243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|164597988|gb|ABY61301.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1253 bits (3243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/974 (62%), Positives = 751/974 (77%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 23 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 80
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L
Sbjct: 81 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLM 140
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 141 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 197
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVV
Sbjct: 198 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVV 257
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 258 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 317
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 318 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 377
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 378 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 437
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 438 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 497
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 498 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 557
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 558 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 617
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E + +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 618 EADMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 677
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 678 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFTPELQG 737
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
+ V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 738 TAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 797
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 798 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 857
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 858 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 917
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 918 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 977
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 978 DMDLESIEDGSFVL 991
>gi|57791636|gb|AAW56586.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1253 bits (3242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 23 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 80
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L
Sbjct: 81 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLM 140
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 141 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 197
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 198 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 257
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 258 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 317
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 318 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 377
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 378 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 437
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 438 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 497
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 498 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 557
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 558 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 617
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 618 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 677
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 678 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 737
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 738 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 797
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 798 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 857
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 858 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 917
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 918 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 977
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 978 DMDLESIEDGSFVL 991
>gi|78643862|emb|CAJ21294.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1253 bits (3242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/967 (63%), Positives = 743/967 (76%), Gaps = 18/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+ GAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSITGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EA+GKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAVGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKK 894
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 895 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 954
Query: 949 LRCIEEG 955
L IE G
Sbjct: 955 LESIENG 961
>gi|39939388|gb|AAR32737.1| phytochrome B [Arabidopsis thaliana]
gi|164597996|gb|ABY61305.1| phytochrome B [Arabidopsis thaliana]
gi|164597998|gb|ABY61306.1| phytochrome B [Arabidopsis thaliana]
gi|164598004|gb|ABY61309.1| phytochrome B [Arabidopsis thaliana]
gi|164598006|gb|ABY61310.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1253 bits (3242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 23 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 80
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L
Sbjct: 81 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLM 140
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 141 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 197
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 198 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 257
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 258 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 317
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 318 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 377
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 378 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 437
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 438 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 497
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 498 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 557
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 558 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 617
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 618 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 677
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 678 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 737
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 738 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 797
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 798 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 857
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 858 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 917
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI II
Sbjct: 918 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIIG 977
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 978 DMDLESIEDGSFVL 991
>gi|293335473|ref|NP_001169810.1| uncharacterized protein LOC100383702 [Zea mays]
gi|37926866|gb|AAP06788.1| phytochrome B1 apoprotein [Zea mays]
Length = 1161
Score = 1253 bits (3242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/943 (63%), Positives = 740/943 (78%), Gaps = 24/943 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+YS+S+ +PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 54 VAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 113
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL------IGIDARTLFTPPSGASL 151
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P S L
Sbjct: 114 TLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPHVSLGADARLLFSPSSAVLL 173
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
+A A+REISLLNPI +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQ
Sbjct: 174 ERAFAAREISLLNPIWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 231
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 232 SQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRD 291
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
+LEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR+
Sbjct: 292 NLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGLSQPLCLVGSTLRA 351
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPF 379
PHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR IPF
Sbjct: 352 PHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRCIPF 411
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 412 PLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMD 471
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYY G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GAA L
Sbjct: 472 LVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHGDSTGLSTDSLADAGYLGAAAL 531
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G+AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 532 GEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 591
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELSSV 616
K+RS PWE +E++AIHSLQ+++RDSF++ E N+SK V G Q +++G++ELSSV
Sbjct: 592 KSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAIVNGQVQLRELELRGINELSSV 651
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
A EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES+ V
Sbjct: 652 AREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEATV 711
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ RAL GEEDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+T
Sbjct: 712 EKLLSRALRGEEDKNVEIKLKTFGSEQSKGPIFVVVNACSSRDYTQNIVGVCFVGQDVTG 771
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
+KV+MDKF+ +QGDY+AI+ + NPLIPPIFASDEN CSEWN AMEK+TGW R EV+GK
Sbjct: 772 QKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVVGKF 831
Query: 797 LPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTD 856
L E+FGN CR+KG D LTKFM++++ I GQ E FPF FF++ G++V+ LTA+ R+
Sbjct: 832 LIGEVFGNCCRLKGPDALTKFMVIIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANTRSK 891
Query: 857 AEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKL 916
+GK IG FCF+QI ++Q A E Q ++ YA++KELAYI QE+KNPL+GIRF + L
Sbjct: 892 MDGKSIGAFCFLQIASTEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSL 951
Query: 917 LESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
L+ + ++++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 952 LQMTDLNDDQRQFLETSSACEKQMSKIVKDASLQSIEDGSLVL 994
>gi|57791644|gb|AAW56590.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1253 bits (3241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 23 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 80
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L
Sbjct: 81 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLM 140
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 141 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 197
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 198 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 257
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 258 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 317
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 318 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 377
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 378 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 437
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 438 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 497
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 498 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 557
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 558 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 617
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 618 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 677
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 678 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 737
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 738 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 797
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 798 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 857
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 858 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 917
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI II
Sbjct: 918 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIIG 977
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 978 DMDLESIEDGSFVL 991
>gi|388458324|gb|AFK31028.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1253 bits (3241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQ +RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQTSRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|57791624|gb|AAW56580.1| phytochrome B [Arabidopsis thaliana]
gi|57791626|gb|AAW56581.1| phytochrome B [Arabidopsis thaliana]
gi|57791628|gb|AAW56582.1| phytochrome B [Arabidopsis thaliana]
gi|57791630|gb|AAW56583.1| phytochrome B [Arabidopsis thaliana]
gi|57791632|gb|AAW56584.1| phytochrome B [Arabidopsis thaliana]
gi|57791634|gb|AAW56585.1| phytochrome B [Arabidopsis thaliana]
gi|164597990|gb|ABY61302.1| phytochrome B [Arabidopsis thaliana]
gi|164597992|gb|ABY61303.1| phytochrome B [Arabidopsis thaliana]
gi|164597994|gb|ABY61304.1| phytochrome B [Arabidopsis thaliana]
gi|164598008|gb|ABY61311.1| phytochrome B [Arabidopsis thaliana]
gi|164598012|gb|ABY61313.1| phytochrome B [Arabidopsis thaliana]
gi|164598018|gb|ABY61316.1| phytochrome B [Arabidopsis thaliana]
gi|164598020|gb|ABY61317.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1253 bits (3241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 23 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 80
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L
Sbjct: 81 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLM 140
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 141 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 197
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 198 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 257
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 258 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 317
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 318 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 377
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 378 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 437
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 438 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 497
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 498 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 557
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 558 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 617
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 618 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 677
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 678 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 737
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 738 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 797
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 798 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 857
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 858 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 917
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 918 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 977
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 978 DMDLESIEDGSFVL 991
>gi|78643942|emb|CAJ21334.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1253 bits (3241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/967 (63%), Positives = 743/967 (76%), Gaps = 18/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR+I YSEN +ML
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L KA +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFK
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKH 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ C++KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCKLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNM--NIIGAFCFLQIASPELQPSLKVQKQQEKK 894
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 895 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 954
Query: 949 LRCIEEG 955
L IE G
Sbjct: 955 LESIENG 961
>gi|158513196|sp|A2XFW2.2|PHYB_ORYSI RecName: Full=Phytochrome B
Length = 1171
Score = 1253 bits (3241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458210|gb|AFK30971.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1253 bits (3241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVTESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE+Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEAQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|57791618|gb|AAW56577.1| phytochrome B [Arabidopsis thaliana]
Length = 1162
Score = 1252 bits (3240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 24 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 81
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML +
Sbjct: 82 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIM 141
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 142 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 198
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 199 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 258
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 259 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 318
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 319 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 378
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 379 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 438
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 439 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 498
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 499 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 558
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 559 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 618
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 619 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 678
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 679 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 738
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 739 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 798
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 799 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 858
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 859 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 918
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 919 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 978
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 979 DMDLESIEDGSFVL 992
>gi|388458316|gb|AFK31024.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 1252 bits (3240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQDI
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDI 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+QI I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQISKIVKDASLQSIEDGSLVL 1004
>gi|388458262|gb|AFK30997.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1252 bits (3240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELN-------GLIGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPASLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|414866482|tpg|DAA45039.1| TPA: phytochromeB1 [Zea mays]
Length = 1161
Score = 1252 bits (3240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/943 (63%), Positives = 740/943 (78%), Gaps = 24/943 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+YS+S+ +PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 54 VAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 113
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL------IGIDARTLFTPPSGASL 151
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P S L
Sbjct: 114 TLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPHVSLGADARLLFSPSSAVLL 173
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
+A A+REISLLNPI +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQ
Sbjct: 174 ERAFAAREISLLNPIWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 231
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 232 SQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRD 291
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
+LEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR+
Sbjct: 292 NLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGLSQPLCLVGSTLRA 351
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPF 379
PHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR IPF
Sbjct: 352 PHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRCIPF 411
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 412 PLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMD 471
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYY G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GAA L
Sbjct: 472 LVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHGDSTGLSTDSLADAGYLGAAAL 531
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G+AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 532 GEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 591
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELSSV 616
K+RS PWE +E++AIHSLQ+++RDSF++ E N+SK V G Q +++G++ELSSV
Sbjct: 592 KSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAIVNGQVQLRELELRGINELSSV 651
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
A EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES+ V
Sbjct: 652 AREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEATV 711
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ RAL GEEDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+T
Sbjct: 712 EKLLSRALRGEEDKNVEIKLKTFGSEQYKGPIFVVVNACSSRDYTQNIVGVCFVGQDVTG 771
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
+KV+MDKF+ +QGDY+AI+ + NPLIPPIFASDEN CSEWN AMEK+TGW R EV+GK
Sbjct: 772 QKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVVGKF 831
Query: 797 LPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTD 856
L E+FGN CR+KG D LTKFM++++ I GQ E FPF FF++ G++V+ LTA+ R+
Sbjct: 832 LIGEVFGNCCRLKGPDALTKFMVIIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANTRSK 891
Query: 857 AEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKL 916
+GK IG FCF+QI ++Q A E Q ++ YA++KELAYI QE+KNPL+GIRF + L
Sbjct: 892 MDGKSIGAFCFLQIASTEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSL 951
Query: 917 LESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
L+ + ++++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 952 LQMTDLNDDQRQFLETSSACEKQMSKIVKDASLQSIEDGSLVL 994
>gi|164597986|gb|ABY61300.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1252 bits (3240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 23 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 80
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L
Sbjct: 81 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLM 140
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 141 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 197
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 198 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 257
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 258 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 317
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 318 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 377
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 378 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 437
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 438 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 497
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 498 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 557
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 558 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 617
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 618 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 677
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 678 KIAELTGLSVEEAMGKSLVSDLIYKENKATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 737
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 738 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 797
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 798 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 857
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 858 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 917
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 918 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 977
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 978 DMDLESIEDGSFVL 991
>gi|388458350|gb|AFK31041.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM +MGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMADMGSIASLVMAVIISSGGDDDHNIARGSVPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLPRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|122247122|sp|Q10MG9.1|PHYB_ORYSJ RecName: Full=Phytochrome B
gi|30578178|dbj|BAC76432.1| phytochrome B [Oryza sativa Japonica Group]
gi|57506674|dbj|BAD86669.1| phytochrome B [Oryza sativa Japonica Group]
gi|108707763|gb|ABF95558.1| Phytochrome B, putative, expressed [Oryza sativa Japonica Group]
gi|388458242|gb|AFK30987.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458278|gb|AFK31005.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458280|gb|AFK31006.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458284|gb|AFK31008.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458248|gb|AFK30990.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458250|gb|AFK30991.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|78643944|emb|CAJ21335.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/967 (63%), Positives = 740/967 (76%), Gaps = 16/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A E +FR I YSEN ML
Sbjct: 61 SFDYSKSVKTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAANEQSFRGIAYSENAKNML 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R F P S L K +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGGDVRIFFRPSSAVLLEKTFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +G +IG FCF+QI P+LQ +L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQQSLKVQKQQEKK 896
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 897 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 956
Query: 949 LRCIEEG 955
L IE G
Sbjct: 957 LESIENG 963
>gi|57791620|gb|AAW56578.1| phytochrome B [Arabidopsis thaliana]
gi|57791622|gb|AAW56579.1| phytochrome B [Arabidopsis thaliana]
gi|164598016|gb|ABY61315.1| phytochrome B [Arabidopsis thaliana]
gi|164598022|gb|ABY61318.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 23 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 80
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML +
Sbjct: 81 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIM 140
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 141 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 197
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 198 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 257
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 258 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 317
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 318 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 377
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 378 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 437
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 438 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 497
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 498 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 557
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 558 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 617
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 618 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 677
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 678 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 737
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 738 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 797
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 798 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 857
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 858 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 917
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 918 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 977
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 978 DMDLESIEDGSFVL 991
>gi|15224231|ref|NP_179469.1| phytochrome B [Arabidopsis thaliana]
gi|130189|sp|P14713.1|PHYB_ARATH RecName: Full=Phytochrome B
gi|16423|emb|CAA35222.1| unnamed protein product [Arabidopsis thaliana]
gi|4185145|gb|AAD08948.1| phytochrome B [Arabidopsis thaliana]
gi|330251714|gb|AEC06808.1| phytochrome B [Arabidopsis thaliana]
Length = 1172
Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 27 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 84
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML +
Sbjct: 85 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIM 144
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 145 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 201
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 202 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 261
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 262 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 321
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 322 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 381
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 382 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 441
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 442 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 501
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 502 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 561
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 562 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 621
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 622 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 681
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 682 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 741
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 742 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 801
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 802 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 861
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 862 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 921
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 922 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 981
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 982 DMDLESIEDGSFVL 995
>gi|388458328|gb|AFK31030.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1251 bits (3238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADVLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+ E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLPVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458234|gb|AFK30983.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1251 bits (3238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYGFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRRI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|240119393|dbj|BAH79245.1| phytochrome B [Cardamine nipponica]
gi|240119395|dbj|BAH79246.1| phytochrome B [Cardamine nipponica]
gi|240119397|dbj|BAH79247.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1251 bits (3238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/937 (64%), Positives = 740/937 (78%), Gaps = 23/937 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEG--VPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + G VPE+QITAYLS+IQRGG IQPF
Sbjct: 67 IQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGFIQPF 126
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GCM+AV+E TFRIIGYSEN EML L +S E E+ + G D R+LF P S L
Sbjct: 127 GCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKPEILAM-GTDVRSLFAPSSSILLE 185
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +R+I++LNP+ +HS ++ KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQS
Sbjct: 186 RAFVARDITILNPVWIHS--KNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQS 243
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AISRLQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R D
Sbjct: 244 QKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDD 303
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV+++Q L Q +CLV STLR+P
Sbjct: 304 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLLVQDDRLSQSMCLVGSTLRAP 363
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCHHTSPRYIPFPL 381
HGCH QYM NMGSIASL MAVIIN ++SMKLWGLVVCHHTS R IPFPL
Sbjct: 364 HGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSMKLWGLVVCHHTSSRCIPFPL 423
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
RYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQSPSIMDLV
Sbjct: 424 RYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLV 483
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAA Y G+ + +GV PTE+Q+KDI WLL NH D TGLSTDSL EAGYPGAA LG
Sbjct: 484 KCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADSTGLSTDSLGEAGYPGAAALGD 543
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+
Sbjct: 544 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKS 603
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK-VQGNTQ--QNGSKMQGVDELSSVAC 618
RS PWE +E++AIHSLQ+++RDSF+E E +SK V G Q ++ S QG DEL +VA
Sbjct: 604 RSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAVQPCRDMSGEQGNDELGAVAR 663
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ +++++E++ V
Sbjct: 664 EMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNK 723
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
L+ RAL G+EDKNVE+KL+ F + Q V+++VNAC+S+DY NN+ GVCFVGQD+T +K
Sbjct: 724 LLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACSSKDYLNNIVGVCFVGQDVTGQK 783
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
++MDKFI +QGDY+AI+ + NPLIPPIFA+DEN C EWNAA+EK+TG R EVIGKML
Sbjct: 784 IVMDKFINIQGDYKAIVHNPNPLIPPIFAADENTICLEWNAALEKLTGVSRGEVIGKMLV 843
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FGN CR+KG D LT+FMI+L+ I GQ TE FPF FF+R G+FV+ LTA++R +
Sbjct: 844 GEVFGNCCRLKGPDALTRFMIVLHNAIGGQETEKFPFPFFDRNGKFVQALLTANKRVSLD 903
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
GKVIG FCF+QI P+LQ AL Q +D + + K KELAYI Q +K+PL+G+RF + LLE
Sbjct: 904 GKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKELAYICQVIKSPLSGLRFANSLLE 963
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+++++E+Q+Q+LETS +CE+QI I+ MDL IE+G
Sbjct: 964 ATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIEDG 1000
>gi|388458258|gb|AFK30995.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1251 bits (3237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSK-------------DSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSILSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458318|gb|AFK31025.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 1251 bits (3237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRRI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458212|gb|AFK30972.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1251 bits (3237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|158322024|gb|ABW33491.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 1251 bits (3237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/865 (69%), Positives = 711/865 (82%), Gaps = 19/865 (2%)
Query: 58 SGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCL 117
SGKSF+Y+RS+ S E VPE+QITAYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +
Sbjct: 3 SGKSFDYTRSIKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAV 62
Query: 118 EMLDLRSRS----EDFELNGL-IGIDARTLFTPPSGASLAKAAASREISLLNPILVH-SN 171
EMLDL +S E + + L IG D RTLFT S SL KAA ++EISL+NPI VH N
Sbjct: 63 EMLDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKN 122
Query: 172 SRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDI 231
SR KPFYAI+HRIDVG+VIDLEP ++GD +S AGAVQSQKLAV AISRLQ+LP GD+
Sbjct: 123 SR---KPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDV 179
Query: 232 GLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAAR 291
GLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+R
Sbjct: 180 GLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASR 239
Query: 292 FLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVM 351
FLF QNRVRMICDC A PV VIQS+EL QPLCLV STLR+PHGCH QYM NMGSIASLVM
Sbjct: 240 FLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVM 299
Query: 352 AVIINSKD---------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
AVIIN D SMKLWGLVVCHHTSPR +PFPLRYACEFL+QA LQL MELQ+
Sbjct: 300 AVIINGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQL 359
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
A QL EK+ILRTQ LLCDMLLRDAP IVTQSPSI DLVKCDGAALYYGG CWL+GVTPT
Sbjct: 360 AAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWLLGVTPT 419
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
E+Q+KDIA WLL +HGD TGLSTDSLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRS
Sbjct: 420 EAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRS 479
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTAKE+KWGGAKHHP+ KD+ +MHPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R
Sbjct: 480 HTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILR 539
Query: 583 DSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTING 642
SF+++++ +K +++ N ++QG+DELSSVA EMVRLIETATAPI VD +G +NG
Sbjct: 540 GSFRDIDDSG-TKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNG 598
Query: 643 WNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQ 702
WNAKVAELTGLP EAMG SL+ ++V E+S VE ++ AL GEE+KNVE+ L+ F Q
Sbjct: 599 WNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQ 658
Query: 703 KQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLI 762
K+ V ++VNAC+SRD+ +N+ GVCFVGQD+T +KV+MDKFIR+QGDY +I+QS NPLI
Sbjct: 659 KEKEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLI 718
Query: 763 PPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLY 822
PPIFASDE ACCSEWNAAMEKVTGW EVIGKML EIFG CR+KGQD +TKF I+L+
Sbjct: 719 PPIFASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLH 778
Query: 823 QGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQ 882
I GQ E FPF FF++QG++VE LTA++RTDA+G++ G FCF+QI +LQ ALE Q
Sbjct: 779 SAIDGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELQHALEVQ 838
Query: 883 GLEDMDIYAKIKELAYIRQEVKNPL 907
++ +A++KELAYIRQE+KNPL
Sbjct: 839 RQQEKKCFARLKELAYIRQEIKNPL 863
>gi|57791616|gb|AAW56576.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 1251 bits (3237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 20 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 77
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML +
Sbjct: 78 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIM 137
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 138 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 194
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 195 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 254
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 255 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 314
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 315 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 374
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 375 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 434
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 435 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 494
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 495 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 554
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 555 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 614
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 615 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 674
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 675 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 734
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 735 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 794
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 795 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 854
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 855 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 914
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 915 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 974
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 975 DMDLESIEDGSFVL 988
>gi|164598000|gb|ABY61307.1| phytochrome B [Arabidopsis thaliana]
gi|164598002|gb|ABY61308.1| phytochrome B [Arabidopsis thaliana]
gi|164598010|gb|ABY61312.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1251 bits (3237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 23 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 80
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L
Sbjct: 81 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLM 140
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 141 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 197
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVV
Sbjct: 198 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVV 257
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 258 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 317
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 318 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 377
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 378 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 437
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 438 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 497
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 498 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 557
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 558 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 617
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 618 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 677
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 678 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFTPELQG 737
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 738 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 797
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 798 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 857
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 858 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 917
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 918 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 977
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 978 DMDLESIEDGSFVL 991
>gi|388458346|gb|AFK31039.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1251 bits (3237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV V Q L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVTQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ + ++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPILVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458216|gb|AFK30974.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458218|gb|AFK30975.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458220|gb|AFK30976.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458260|gb|AFK30996.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458268|gb|AFK31000.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1251 bits (3237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458230|gb|AFK30981.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458288|gb|AFK31010.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458292|gb|AFK31012.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458294|gb|AFK31013.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458296|gb|AFK31014.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458300|gb|AFK31016.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458306|gb|AFK31019.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458364|gb|AFK31048.1| phytochrome b, partial [Oryza rufipogon]
gi|388458372|gb|AFK31052.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1251 bits (3236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|240119399|dbj|BAH79248.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1251 bits (3236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/937 (64%), Positives = 740/937 (78%), Gaps = 23/937 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEG--VPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + G VPE+QITAYLS+IQRGG IQPF
Sbjct: 67 IQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGFIQPF 126
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GCM+AV+E TFRIIGYSEN EML L +S E E+ + G D R+LF P S L
Sbjct: 127 GCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKPEILAM-GTDVRSLFAPSSSILLE 185
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +R+I++LNP+ +HS ++ KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQS
Sbjct: 186 RAFVARDITILNPVWIHS--KNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQS 243
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AISRLQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R D
Sbjct: 244 QKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDD 303
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV+++Q L Q +CLV STLR+P
Sbjct: 304 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLLVQDDRLSQSMCLVGSTLRAP 363
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCHHTSPRYIPFPL 381
HGCH QYM NMGSIASL MAVIIN ++SMKLWGLVVCHHTS R IPFPL
Sbjct: 364 HGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSMKLWGLVVCHHTSSRCIPFPL 423
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
RYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQSPSIMDLV
Sbjct: 424 RYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLV 483
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAA Y G+ + +GV PTE+Q+KDI WLL NH D TGLSTDSL EAGYPGAA LG
Sbjct: 484 KCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADSTGLSTDSLGEAGYPGAAALGD 543
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+
Sbjct: 544 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKS 603
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK-VQGNTQ--QNGSKMQGVDELSSVAC 618
RS PWE +E++AIHSLQ+++RDSF+E E +SK V G Q ++ S QG DEL +VA
Sbjct: 604 RSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAVQPCRDMSGEQGNDELGAVAR 663
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ +++++E++ V
Sbjct: 664 EMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNK 723
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
L+ RAL G+EDKNVE+KL+ F + Q V+++VNAC+S+DY NN+ GVCFVGQD+T +K
Sbjct: 724 LLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACSSKDYLNNIVGVCFVGQDVTGQK 783
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
++MDKFI +QGDY+AI+ + NPLIPPIFA+DEN C EWNAA+EK+TG R EVIGKML
Sbjct: 784 IVMDKFINIQGDYKAIVHNPNPLIPPIFAADENTICLEWNAALEKLTGVSRGEVIGKMLV 843
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FGN CR+KG D LT+FMI+L+ I GQ TE FPF FF+R G+FV+ LTA++R +
Sbjct: 844 GEVFGNCCRLKGPDALTRFMIVLHNAIGGQETEKFPFPFFDRNGKFVQALLTANKRVSLD 903
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
GKVIG FCF+QI P+LQ AL Q +D + + K KELAYI Q +K+PL+G+RF + LLE
Sbjct: 904 GKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKELAYICQVIKSPLSGLRFANSLLE 963
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+++++E+Q+Q+LETS +CE+QI I+ MDL IE+G
Sbjct: 964 ATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIEDG 1000
>gi|388458232|gb|AFK30982.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1251 bits (3236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LD+ L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDVSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|164598014|gb|ABY61314.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1251 bits (3236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/974 (62%), Positives = 748/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 23 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 80
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L
Sbjct: 81 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLM 140
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 141 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 197
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 198 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 257
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 258 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 317
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 318 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 377
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 378 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 437
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 438 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 497
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 498 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 557
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 558 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 617
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 618 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 677
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 678 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 737
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 738 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 797
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 798 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 857
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 858 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 917
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+R + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 918 DTECFTKAKELAYICQVIKNPLSGMRLANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 977
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 978 DMDLESIEDGSFVL 991
>gi|388458304|gb|AFK31018.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1250 bits (3235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGA+
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAI 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|240119391|dbj|BAH79244.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1250 bits (3235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/937 (64%), Positives = 740/937 (78%), Gaps = 23/937 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEG--VPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + G VPE+QITAYLS+IQRGG IQPF
Sbjct: 67 IQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGFIQPF 126
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GCM+AV+E TFRIIGYSEN EML L +S E E+ + G D R+LF P S L
Sbjct: 127 GCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKPEILAM-GTDVRSLFAPSSSILLE 185
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +R+I++LNP+ +HS ++ KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQS
Sbjct: 186 RAFVARDITILNPVWIHS--KNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQS 243
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AISRLQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R D
Sbjct: 244 QKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDD 303
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV+++Q L Q +CLV STLR+P
Sbjct: 304 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLLVQDDRLSQSMCLVGSTLRAP 363
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCHHTSPRYIPFPL 381
HGCH QYM NMGSIASL MAVIIN ++SMKLWGLVVCHHT+ R IPFPL
Sbjct: 364 HGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSMKLWGLVVCHHTTSRCIPFPL 423
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
RYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQSPSIMDLV
Sbjct: 424 RYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLV 483
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAA Y G+ + +GV PTE+Q+KDI WLL NH D TGLSTDSL EAGYPGAA LG
Sbjct: 484 KCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADSTGLSTDSLGEAGYPGAAALGD 543
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+
Sbjct: 544 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKS 603
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK-VQGNTQ--QNGSKMQGVDELSSVAC 618
RS PWE +E++AIHSLQ+++RDSF+E E +SK V G Q ++ S QG DEL +VA
Sbjct: 604 RSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAVQPCRDMSGEQGNDELGAVAR 663
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ +++++E++ V
Sbjct: 664 EMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNK 723
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
L+ RAL G+EDKNVE+KL+ F + Q V+++VNAC+S+DY NN+ GVCFVGQD+T +K
Sbjct: 724 LLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACSSKDYLNNIVGVCFVGQDVTGQK 783
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
++MDKFI +QGDY+AI+ + NPLIPPIFA+DEN C EWNAA+EK+TG R EVIGKML
Sbjct: 784 IVMDKFINIQGDYKAIVHNPNPLIPPIFAADENTICLEWNAALEKLTGVSRGEVIGKMLV 843
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FGN CR+KG D LT+FMI+L+ I GQ TE FPF FF+R G+FV+ LTA++R +
Sbjct: 844 GEVFGNCCRLKGPDALTRFMIVLHNAIGGQETEKFPFPFFDRNGKFVQALLTANKRVSLD 903
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
GKVIG FCF+QI P+LQ AL Q +D + + K KELAYI Q +K+PL+G+RF + LLE
Sbjct: 904 GKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKELAYICQVIKSPLSGLRFANSLLE 963
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+++++E+Q+Q+LETS +CE+QI I+ MDL IE+G
Sbjct: 964 ATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIEDG 1000
>gi|388458254|gb|AFK30993.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1250 bits (3235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRL ALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLHALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458236|gb|AFK30984.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458286|gb|AFK31009.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458310|gb|AFK31021.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1250 bits (3235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|158321996|gb|ABW33477.1| phytochrome P [Pinus sylvestris]
gi|158321998|gb|ABW33478.1| phytochrome P [Pinus sylvestris]
gi|158322000|gb|ABW33479.1| phytochrome P [Pinus sylvestris]
gi|158322002|gb|ABW33480.1| phytochrome P [Pinus sylvestris]
gi|158322004|gb|ABW33481.1| phytochrome P [Pinus sylvestris]
gi|158322006|gb|ABW33482.1| phytochrome P [Pinus sylvestris]
gi|158322008|gb|ABW33483.1| phytochrome P [Pinus sylvestris]
gi|158322010|gb|ABW33484.1| phytochrome P [Pinus sylvestris]
gi|158322012|gb|ABW33485.1| phytochrome P [Pinus sylvestris]
gi|158322014|gb|ABW33486.1| phytochrome P [Pinus sylvestris]
gi|158322016|gb|ABW33487.1| phytochrome P [Pinus sylvestris]
gi|158322020|gb|ABW33489.1| phytochrome P [Pinus sylvestris]
gi|158322022|gb|ABW33490.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 1250 bits (3235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/865 (69%), Positives = 711/865 (82%), Gaps = 19/865 (2%)
Query: 58 SGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCL 117
SGKSF+Y+RS+ S E VPE+QITAYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +
Sbjct: 3 SGKSFDYTRSIKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAV 62
Query: 118 EMLDLRSRS----EDFELNGL-IGIDARTLFTPPSGASLAKAAASREISLLNPILVH-SN 171
EMLDL +S E + + L IG D RTLFT S SL KAA ++EISL+NPI VH N
Sbjct: 63 EMLDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKN 122
Query: 172 SRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDI 231
SR KPFYAI+HRIDVG+VIDLEP ++GD +S AGAVQSQKLAV AISRLQ+LP GD+
Sbjct: 123 SR---KPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDV 179
Query: 232 GLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAAR 291
GLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+R
Sbjct: 180 GLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASR 239
Query: 292 FLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVM 351
FLF QNRVRMICDC A PV VIQS+EL QPLCLV STLR+PHGCH QYM NMGSIASLVM
Sbjct: 240 FLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVM 299
Query: 352 AVIINSKD---------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
AVIIN D SMKLWGLVVCHHTSPR +PFPLRYACEFL+QA LQL MELQ+
Sbjct: 300 AVIINGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQL 359
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
A QL EK+ILRTQ LLCDMLLRDAP IVTQSPSI DLVKCDGAALYYGG CW++GVTPT
Sbjct: 360 AAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPT 419
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
E+Q+KDIA WLL +HGD TGLSTDSLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRS
Sbjct: 420 EAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRS 479
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTAKE+KWGGAKHHP+ KD+ +MHPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R
Sbjct: 480 HTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILR 539
Query: 583 DSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTING 642
SF+++++ +K +++ N ++QG+DELSSVA EMVRLIETATAPI VD +G +NG
Sbjct: 540 GSFRDIDDSG-TKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNG 598
Query: 643 WNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQ 702
WNAKVAELTGLP EAMG SL+ ++V E+S VE ++ AL GEE+KNVE+ L+ F Q
Sbjct: 599 WNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQ 658
Query: 703 KQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLI 762
K+ V ++VNAC+SRD+ +N+ GVCFVGQD+T +KV+MDKFIR+QGDY +I+QS NPLI
Sbjct: 659 KEKEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLI 718
Query: 763 PPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLY 822
PPIFASDE ACCSEWNAAMEKVTGW EVIGKML EIFG CR+KGQD +TKF I+L+
Sbjct: 719 PPIFASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLH 778
Query: 823 QGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQ 882
I GQ E FPF FF++QG++VE LTA++RTDA+G++ G FCF+QI +LQ ALE Q
Sbjct: 779 SAIDGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELQHALEVQ 838
Query: 883 GLEDMDIYAKIKELAYIRQEVKNPL 907
++ +A++KELAYIRQE+KNPL
Sbjct: 839 RQQEKKCFARLKELAYIRQEIKNPL 863
>gi|388458334|gb|AFK31033.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y+RS+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTRSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHFVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYFGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|57791638|gb|AAW56587.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/974 (62%), Positives = 748/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 20 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 77
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L
Sbjct: 78 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLM 137
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 138 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 194
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 195 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 254
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 255 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 314
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 315 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 374
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 375 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 434
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 435 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 494
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 495 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 554
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 555 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 614
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 615 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 674
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 675 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 734
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 735 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 794
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 795 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 854
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 855 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 914
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+R + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 915 DTECFTKAKELAYICQVIKNPLSGMRLANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 974
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 975 DMDLESIEDGSFVL 988
>gi|388458244|gb|AFK30988.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRL ALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLHALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|326516988|dbj|BAJ96486.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1168
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 738/945 (78%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DAGL A FEQS ASG+SF+YS+S+++PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 59 VAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 118
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P SG
Sbjct: 119 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSPSSGVL 178
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 179 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 236
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FHDD+HGEV++E RR
Sbjct: 237 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAESRR 296
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
DLEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA V VIQ + QPLCLV STLR
Sbjct: 297 GDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGSTLR 356
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 357 SPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSPRCI 416
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 417 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 476
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAAL+Y G+ + +GVTPTE+Q+KDI WL HGD TGLSTDSLA+AGYPGA
Sbjct: 477 MDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYPGAT 536
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 537 ALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 596
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 597 VVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGIDELS 656
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSLI +++ +ES+
Sbjct: 657 SVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKDLIFKESEE 716
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
VE L+ +AL GEE NVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQDI
Sbjct: 717 IVEKLLSQALRGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDI 776
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKF+ +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AME +TGW R EV+G
Sbjct: 777 TGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMENLTGWSRGEVVG 836
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI L+ I GQ +E PF FF++ G++V+ LTA+ R
Sbjct: 837 KLLVGEVFGNCCRLKGPDALTKFMIALHNAIGGQDSEKSPFSFFDKNGKYVQALLTANTR 896
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q ++ YA++KELAYI QE+KNPL+GIRF +
Sbjct: 897 SKMDGETIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTN 956
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 957 SLLEMTDLKDDQRQFLETSAACEKQMSKIVKDASLQSIEDGSLVL 1001
>gi|57791640|gb|AAW56588.1| phytochrome B [Arabidopsis thaliana]
Length = 1161
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/974 (62%), Positives = 748/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 22 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 79
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L
Sbjct: 80 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLM 139
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 140 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 196
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 197 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 256
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 257 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 316
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 317 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 376
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 377 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 436
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 437 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 496
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 497 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 556
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 557 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 616
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 617 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 676
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 677 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 736
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 737 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 796
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVI KM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 797 FAADENTCCLEWNMAMEKLTGWSRSEVIEKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 856
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 857 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 916
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 917 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 976
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 977 DMDLESIEDGSFVL 990
>gi|240119403|dbj|BAH79250.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/937 (64%), Positives = 739/937 (78%), Gaps = 23/937 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEG--VPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + G VPE+QITAYLS+IQRGG IQPF
Sbjct: 67 IQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGFIQPF 126
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GCM+AV+E TFRIIGYSEN EML L +S E E+ + G D R+LF P S L
Sbjct: 127 GCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKPEILAM-GTDVRSLFAPSSSILLE 185
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +R+I++LNP+ +HS ++ KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQS
Sbjct: 186 RAFVARDITILNPVWIHS--KNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQS 243
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AISRLQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R D
Sbjct: 244 QKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDD 303
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV+++Q L Q +CLV STLR+P
Sbjct: 304 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLLVQDDRLSQSMCLVGSTLRAP 363
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCHHTSPRYIPFPL 381
HGCH QYM NMGSIASL MAVIIN ++SMKLWGLVVCHHTS R IPFPL
Sbjct: 364 HGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSMKLWGLVVCHHTSSRCIPFPL 423
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
RYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQSPSIMD V
Sbjct: 424 RYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDFV 483
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAA Y G+ + +GV PTE+Q+KDI WLL NH D TGLSTDSL EAGYPGAA LG
Sbjct: 484 KCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADSTGLSTDSLGEAGYPGAAALGD 543
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+
Sbjct: 544 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKS 603
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK-VQGNTQ--QNGSKMQGVDELSSVAC 618
RS PWE +E++AIHSLQ+++RDSF+E E +SK V G Q ++ S QG DEL +VA
Sbjct: 604 RSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAVQPCRDMSGEQGNDELGAVAR 663
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ +++++E++ V
Sbjct: 664 EMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNK 723
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
L+ RAL G+EDKNVE+KL+ F + Q V+++VNAC+S+DY NN+ GVCFVGQD+T +K
Sbjct: 724 LLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACSSKDYLNNIVGVCFVGQDVTGQK 783
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
++MDKFI +QGDY+AI+ + NPLIPPIFA+DEN C EWNAA+EK+TG R EVIGKML
Sbjct: 784 IVMDKFINIQGDYKAIVHNPNPLIPPIFAADENTICLEWNAALEKLTGVSRGEVIGKMLV 843
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FGN CR+KG D LT+FMI+L+ I GQ TE FPF FF+R G+FV+ LTA++R +
Sbjct: 844 GEVFGNCCRLKGPDALTRFMIVLHNAIGGQETEKFPFPFFDRNGKFVQALLTANKRVSLD 903
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
GKVIG FCF+QI P+LQ AL Q +D + + K KELAYI Q +K+PL+G+RF + LLE
Sbjct: 904 GKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKELAYICQVIKSPLSGLRFANSLLE 963
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+++++E+Q+Q+LETS +CE+QI I+ MDL IE+G
Sbjct: 964 ATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIEDG 1000
>gi|388458332|gb|AFK31032.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIP IFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPLIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|222624796|gb|EEE58928.1| hypothetical protein OsJ_10581 [Oryza sativa Japonica Group]
Length = 1128
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 19 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 78
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 79 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 138
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 139 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 196
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 197 QSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 256
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 257 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 316
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 317 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 376
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 377 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 436
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 437 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 496
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 497 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 556
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 557 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 616
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 617 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 676
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 677 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 736
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 737 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 796
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 797 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 856
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 857 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 916
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 917 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 961
>gi|388458264|gb|AFK30998.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1249 bits (3233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
PHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 LPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|57791614|gb|AAW56575.1| phytochrome B [Arabidopsis thaliana]
Length = 1162
Score = 1249 bits (3233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 24 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 81
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML +
Sbjct: 82 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIM 141
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 142 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 198
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 199 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 258
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 259 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 318
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 319 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 378
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 379 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 438
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 439 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 498
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 499 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 558
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 559 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 618
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 619 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 678
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 679 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 738
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 739 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 798
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 799 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 858
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 859 GGQDTDKFPFPFFDRNGKFVQALLTANKRVILEGKVIGAFCFLQIPSPELQQALAVQRRQ 918
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 919 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 978
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 979 DMDLESIEDGSFVL 992
>gi|240119401|dbj|BAH79249.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1249 bits (3233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/937 (64%), Positives = 740/937 (78%), Gaps = 23/937 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEG--VPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + G VPE+QITAYLS+IQRGG IQPF
Sbjct: 67 IQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGFIQPF 126
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GCM+AV+E TFRIIGYSEN EML L +S E E+ + G D R+LF P S L
Sbjct: 127 GCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKPEILAM-GTDVRSLFAPSSSILLE 185
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +R+I++LNP+ +HS ++ KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQS
Sbjct: 186 RAFVARDITILNPVWIHS--KNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQS 243
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AISRLQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R D
Sbjct: 244 QKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDD 303
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV+++Q L Q +CLV STLR+P
Sbjct: 304 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLLVQDDRLSQSMCLVGSTLRAP 363
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCHHTSPRYIPFPL 381
HGCH QYM NMGSIASL MAVIIN ++SMKLWGLVVCHHTS R IPFPL
Sbjct: 364 HGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSMKLWGLVVCHHTSSRCIPFPL 423
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
RYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQSPSIMDLV
Sbjct: 424 RYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLV 483
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAA Y G+ + +GV PTE+Q+KDI WLL NH D TGLSTDSL EAGYPGAA LG
Sbjct: 484 KCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADSTGLSTDSLGEAGYPGAAALGD 543
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+
Sbjct: 544 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKS 603
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK-VQGNTQ--QNGSKMQGVDELSSVAC 618
RS PWE +E++AIHSLQ+++RDSF+E E +SK V G Q ++ S QG DEL +VA
Sbjct: 604 RSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAVQPCRDMSGEQGNDELGAVAR 663
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ +++++E++ V
Sbjct: 664 EMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVNK 723
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
L+ RAL G+EDKNVE+KL+ F + Q V+++VNAC+S+DY NN+ GVCFVGQD+T +K
Sbjct: 724 LLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACSSKDYLNNIVGVCFVGQDVTGQK 783
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
++MDKFI +QGDY+AI+ + NPLIPPIFA+D+N C EWNAA+EK+TG R EVIGKML
Sbjct: 784 IVMDKFINIQGDYKAIVHNPNPLIPPIFAADDNTICLEWNAALEKLTGVSRGEVIGKMLV 843
Query: 799 REIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
E+FGN CR+KG D LT+FMI+L+ I GQ TE FPF FF+R G+FV+ LTA++R +
Sbjct: 844 GEVFGNCCRLKGPDALTRFMIVLHNAIGGQETEKFPFPFFDRNGKFVQALLTANKRVSLD 903
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
GKVIG FCF+QI P+LQ AL Q +D + + K KELAYI Q +K+PL+G+RF + LLE
Sbjct: 904 GKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKELAYICQVIKSPLSGLRFANSLLE 963
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+++++E+Q+Q+LETS +CE+QI I+ MDL IE+G
Sbjct: 964 ATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIEDG 1000
>gi|340007755|gb|AEK26584.1| phytochrome B1 [Populus tremula]
Length = 1128
Score = 1249 bits (3233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/922 (64%), Positives = 731/922 (79%), Gaps = 14/922 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS SGKSF+YS+SV + + VPEEQITAYLSKIQRGG IQPFGC
Sbjct: 41 IAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQSVPEEQITAYLSKIQRGGHIQPFGC 100
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGLI--GIDARTLFTPPSGASLAKAA 155
M+AV+E +FR+I YSEN EML +S + ++ G D RTLF P S A L KA
Sbjct: 101 MIAVDEGSFRVIAYSENAKEMLGFTPQSVPSLDKQEILSDGTDVRTLFRPSSSAMLEKAF 160
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
+REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKL
Sbjct: 161 GAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKL 218
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
AV +IS+LQ+LPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E +R+DLEP
Sbjct: 219 AVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAENKRADLEP 278
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
Y+G+H+P+ DIPQA+RFLFKQNRVRMI DCHA PV VIQ + L QPLCLV STLR+PHGC
Sbjct: 279 YIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVRVIQDEALMQPLCLVGSTLRAPHGC 338
Query: 336 HLQYMTNMGSIASLVMAVIINS--------KDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
H QYM NMGSIAS+ MAVIIN ++S +LWGLVVCHHTS R IPFPLRYACEF
Sbjct: 339 HAQYMANMGSIASMAMAVIINGNEEEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEF 398
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA
Sbjct: 399 LMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAA 458
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY G+ + GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 459 LYYQGQYYPSGVTPTEAQIKDIVEWLLALHGDSTGLSTDSLADAGYPGAASLGNAVCGMA 518
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS WE
Sbjct: 519 VAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLLWE 578
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
+E++AIHSLQ+++RDSF++ E N SK TQ +++QG+DELSSVA EMVRLIETA
Sbjct: 579 NAEMDAIHSLQLILRDSFRDAEATN-SKAVVRTQLEDTELQGMDELSSVAREMVRLIETA 637
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
TAPIF VD G INGWNAKVAELTGL AMGKSL+ ++V++E + V+ L+ RAL
Sbjct: 638 TAPIFAVDVDGCINGWNAKVAELTGLSVERAMGKSLVHDLVYKEYEETVDKLLHRALRXX 697
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
+KLR F+ + Q ++++VNAC+S+DY NN+ GVCFVGQD+T +KV+MDK++ +
Sbjct: 698 XXXXXXIKLRTFDSEHQKKALFVVVNACSSKDYMNNIVGVCFVGQDVTGQKVVMDKYVHI 757
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCR 807
QGDY+AI+ S NPLIPPIFASDEN CC EWN AMEK TGW R EVIGKML E+FG+FC+
Sbjct: 758 QGDYKAIVHSPNPLIPPIFASDENTCCLEWNTAMEKFTGWSRGEVIGKMLVGEVFGSFCQ 817
Query: 808 MKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCF 867
+KG D LTKFMI L+ I GQ T+ PF FF+R G++V+ LTA++R + EG++IG FCF
Sbjct: 818 LKGSDALTKFMIALHNAIGGQDTDKLPFSFFDRNGKYVQALLTANKRVNMEGEIIGAFCF 877
Query: 868 MQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQR 927
+QI +LQ AL+ Q ++ A++KELAYI QE++NPL+G+RF + LLE++ ++E+Q+
Sbjct: 878 LQIASNELQQALKVQRQQEKKCSARMKELAYICQEIRNPLSGLRFTNSLLENTDLTEDQK 937
Query: 928 QYLETSDACERQIMTIIDGMDL 949
Q+LETS ACE+QI+ I +DL
Sbjct: 938 QFLETSAACEKQILKITRDVDL 959
>gi|388458282|gb|AFK31007.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1249 bits (3232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S ++KLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAIKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458366|gb|AFK31049.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1249 bits (3232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+V DLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVTDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHGDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF++NRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRRNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458322|gb|AFK31027.1| phytochrome b, partial [Oryza officinalis]
Length = 1171
Score = 1249 bits (3232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QITAYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQITAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDGHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWEDAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T ++V+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQRVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|255642594|gb|ACU21557.1| phytochrome B [Medicago sativa]
Length = 1141
Score = 1249 bits (3232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/973 (62%), Positives = 754/973 (77%), Gaps = 30/973 (3%)
Query: 7 RETTNSIGGGHN--TTPFKSSDAKMKPVNKG--KTIIDHYNADAGLLAEFEQSVASGKSF 62
+ T++SI H T K ++ + VN K I Y DA L A FEQS G SF
Sbjct: 11 KTTSSSISQRHQLQITTTKETEQQNNNVNNKSMKKAIAQYIEDARLHAVFEQS---GDSF 67
Query: 63 NYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDL 122
+YS+S+ VPE+QITAYL+KIQRGG IQPFG M+AV+EP+FR++ YSEN +ML +
Sbjct: 68 DYSQSIRLTTASVPEQQITAYLAKIQRGGFIQPFGSMIAVDEPSFRVLAYSENARDMLGI 127
Query: 123 RSRS-------EDFELNGL-IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRS 174
+S ++ +G IG D R+LFT SG L KA ++REISL+NPI +HS RS
Sbjct: 128 TPQSVPSLEDDDESSSSGFNIGTDVRSLFTHSSGVLLEKAFSAREISLMNPIWIHS--RS 185
Query: 175 IEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLL 234
KPFY ILHRIDVG+VIDLEP++S DPALS+AGAVQSQKLAV AIS+LQ+LPGGD+ +L
Sbjct: 186 TGKPFYGILHRIDVGVVIDLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKVL 245
Query: 235 CDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLF 294
CD VVE V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLF
Sbjct: 246 CDAVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRIDLEPYMGLHYPATDIPQASRFLF 305
Query: 295 KQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVI 354
KQNRVRMI DC+A PV V Q + L QP+CLV STLR+PHGCH QYM NMGSIASL MAVI
Sbjct: 306 KQNRVRMIVDCNASPVRVFQDEALVQPVCLVGSTLRAPHGCHAQYMANMGSIASLAMAVI 365
Query: 355 INSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
IN D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+
Sbjct: 366 INGNDEDGVGIGGTGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQL 425
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
A Q EK +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAAL+Y G + +GVTPT
Sbjct: 426 AAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALFYQGNYYPLGVTPT 485
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
ESQ++DI WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A IT KDFLFWFRS
Sbjct: 486 ESQIRDIIEWLLAFHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRS 545
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS W+ +E++AIHSLQ+++R
Sbjct: 546 HTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSMQWDNAEMDAIHSLQLILR 605
Query: 583 DSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTING 642
DSF+E E NDSK +T ++QGVDELSSVA EMVRLIETATAPIF VD +G ING
Sbjct: 606 DSFKEAEN-NDSKAVVHTHMAELELQGVDELSSVAREMVRLIETATAPIFAVDVNGRING 664
Query: 643 WNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQ 702
WNAKV+ELTGL +AMGKSL+ ++V++ESQ V+ L+ AL GEEDKNVE+K+R F
Sbjct: 665 WNAKVSELTGLLVEDAMGKSLLHDLVYKESQETVDKLLSHALKGEEDKNVEIKMRTFGPG 724
Query: 703 KQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLI 762
Q+ V+I+VNAC+S+DY NN+ GVCFVGQD+T +KV+MDKFI +QGDY+AI+ S N LI
Sbjct: 725 NQNKAVFIVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNALI 784
Query: 763 PPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLY 822
PPIFASD+N CC EWN AMEK++GW R +VIGK+L E+FG+FC++KG D +TKFMI+L+
Sbjct: 785 PPIFASDDNTCCLEWNNAMEKLSGWSRTDVIGKLLVGEVFGSFCQLKGSDAMTKFMIVLH 844
Query: 823 QGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQ 882
+ GQ T+ FPF F + G++V+ LTA++R + +G++IG FCF+QI+ P+LQ AL Q
Sbjct: 845 NALGGQDTDKFPFSFVDGHGKYVQTFLTANKRVNIDGQIIGAFCFLQIVSPELQQALTVQ 904
Query: 883 GLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMT 942
+D +A++KELAYI QEVKNPL+GIRF + LLES+ +++ Q+Q LETS ACE+Q++
Sbjct: 905 RQQDSSCFARMKELAYICQEVKNPLSGIRFTNSLLESTCLTDEQKQLLETSAACEKQMLK 964
Query: 943 IIDGMDLRCIEEG 955
II +DL I++G
Sbjct: 965 IIRDIDLDSIDDG 977
>gi|388458272|gb|AFK31002.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1249 bits (3232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+RE SLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAARETSLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|158322018|gb|ABW33488.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 1249 bits (3232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/866 (69%), Positives = 712/866 (82%), Gaps = 19/866 (2%)
Query: 58 SGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCL 117
SGKSF+Y+RS+ S E VPE+QITAYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +
Sbjct: 3 SGKSFDYTRSIKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAV 62
Query: 118 EMLDLRSRS----EDFELNGL-IGIDARTLFTPPSGASLAKAAASREISLLNPILVH-SN 171
EMLDL +S E + + L IG D RTLFT S SL KAA ++EISL+NPI VH N
Sbjct: 63 EMLDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKN 122
Query: 172 SRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDI 231
SR KPFYAI+HRIDVG+VIDLEP ++GD +S AGAVQSQKLAV AISRLQ+LP GD+
Sbjct: 123 SR---KPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDV 179
Query: 232 GLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAAR 291
GLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+R
Sbjct: 180 GLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASR 239
Query: 292 FLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVM 351
FLF QNRVRMICDC A PV VIQS+EL QPLCLV STLR+PHGCH QYM NMGSIASLVM
Sbjct: 240 FLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVM 299
Query: 352 AVIINSKD---------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
AVIIN D SMKLWGLVVCHHTSPR +PFPLRYACEFL+QA LQL MELQ+
Sbjct: 300 AVIINGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQL 359
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
A QL EK+ILRTQ LLCDMLLRDAP IVTQSPSI DLVKCDGAALYYGG CW++GVTPT
Sbjct: 360 AAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPT 419
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
E+Q+KDIA WLL +HGD TGLSTDSLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRS
Sbjct: 420 EAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRS 479
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTAKE+KWGGAKHHP+ KD+ +MHPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R
Sbjct: 480 HTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILR 539
Query: 583 DSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTING 642
SF+++++ +K +++ N ++QG+DELSSVA EMVRLIETATAPI VD +G +NG
Sbjct: 540 GSFRDIDDSG-TKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNG 598
Query: 643 WNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQ 702
WNAKVAELTGLP EAMG SL+ ++V E+S VE ++ AL GEE+KNVE+ L+ F Q
Sbjct: 599 WNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQ 658
Query: 703 KQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLI 762
K+ V ++VNAC+SRD+ +N+ GVCFVGQD+T +KV+MDKFIR+QGDY +I+QS NPLI
Sbjct: 659 KEKEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLI 718
Query: 763 PPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLY 822
PPIFASDE ACCSEWNAAMEKVTGW+ EVIGKM EIFG CR+KGQD +TKF I+L+
Sbjct: 719 PPIFASDEYACCSEWNAAMEKVTGWIHDEVIGKMPVGEIFGGCCRLKGQDAVTKFTIVLH 778
Query: 823 QGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQ 882
I GQ E FPF FF++QG++VE LTA++RTDA+G++ G FCF+QI +LQ ALE Q
Sbjct: 779 SAIDGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELQHALEVQ 838
Query: 883 GLEDMDIYAKIKELAYIRQEVKNPLN 908
++ +A++KELAYIRQE+KNPL+
Sbjct: 839 RQQEKKCFARLKELAYIRQEIKNPLH 864
>gi|62199070|gb|AAX76779.1| putative phytochrome B [Triticum aestivum]
Length = 1166
Score = 1249 bits (3231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/945 (63%), Positives = 740/945 (78%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DAGL A FEQS ASG+SF+YS+S+++PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 57 VAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 116
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P SG
Sbjct: 117 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSPSSGVL 176
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 177 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 234
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FHDD+HGEV++E RR
Sbjct: 235 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAESRR 294
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
DLEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA V VIQ + QPLCLV STLR
Sbjct: 295 GDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGSTLR 354
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 355 SPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSPRCI 414
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 415 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHMLRTQTLLCDMLLRDSPTGIVTQSPSI 474
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAAL+Y G+ + +GVTPTE+Q+KDI WL HGD TGLSTDSLA+AGYPGA
Sbjct: 475 MDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYPGAT 534
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 535 ALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 594
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 595 VVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGIDELS 654
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+ +++ +ES+
Sbjct: 655 SVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLVKDLIFKESEE 714
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
VE L+ +AL GEE NVE+KL+ F ++ ++++VNAC+SRDY ++ GVCFVGQDI
Sbjct: 715 IVEKLLSQALKGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKSIVGVCFVGQDI 774
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKF+ +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 775 TGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMEKLTGWSRGEVVG 834
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ +E PF FF++ G++V+ LTA+ R
Sbjct: 835 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDSEKSPFSFFDKNGKYVQALLTANTR 894
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q ++ YA++KELAYI QE+KNPL+GIRF +
Sbjct: 895 SKMDGETIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTN 954
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 955 SLLEMTDLKDDQRQFLETSAACEKQMSKIVKDASLQSIEDGSLVL 999
>gi|388458348|gb|AFK31040.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1249 bits (3231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LL DMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLRDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMNGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458256|gb|AFK30994.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1249 bits (3231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPPSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+R ISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAARGISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458312|gb|AFK31022.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1249 bits (3231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN +++DL L+ +G DAR LF P S
Sbjct: 122 PLAVADDSSFRLLAYSENTADLVDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSADL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458320|gb|AFK31026.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 1248 bits (3230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SP+GCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPYGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458270|gb|AFK31001.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1248 bits (3230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN +MLDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADMLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +M+LWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMELWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL +ELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNIELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458238|gb|AFK30985.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458308|gb|AFK31020.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458376|gb|AFK31054.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1248 bits (3230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TENKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|39777267|gb|AAR30903.1| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 1248 bits (3230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/943 (63%), Positives = 740/943 (78%), Gaps = 24/943 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+YS+S+ +PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 71 VAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 130
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL------IGIDARTLFTPPSGASL 151
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P S L
Sbjct: 131 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPSSAVLL 190
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
+A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQ
Sbjct: 191 ERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 248
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQKLAV AISRLQALPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 249 SQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRD 308
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
+LEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ + QPLCLV STLR+
Sbjct: 309 NLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGSTLRA 368
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPF 379
PHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR IPF
Sbjct: 369 PHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRCIPF 428
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 429 PLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMD 488
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYY G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GAA L
Sbjct: 489 LVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGAAAL 548
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 549 GDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 608
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELSSV 616
K+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G++ELSSV
Sbjct: 609 KSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINELSSV 668
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
A EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES+ V
Sbjct: 669 AREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEEIV 728
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ RAL GEEDKNVE+KL+ F ++ + ++++VNAC+SRDY N+ GVCFVGQD+T
Sbjct: 729 EKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQDVTG 788
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
+KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CSEWN AMEK+TGW R EV+GK
Sbjct: 789 QKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVVGKF 848
Query: 797 LPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTD 856
L E+FG+FCR+KG D LTKFM++++ I GQ E FPF FF++ G++V+ LTA+ R+
Sbjct: 849 LIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANTRSK 908
Query: 857 AEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKL 916
+GK IG FCF+QI ++Q A E Q ++ YA++KELAYI QE+KNPL+GIRF + L
Sbjct: 909 MDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSL 968
Query: 917 LESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
L+ + ++++QRQ+LET ACE+Q+ I+ L+ IE+G V
Sbjct: 969 LQMTDLNDDQRQFLETCSACEKQMSKIVKDTTLQSIEDGSLVL 1011
>gi|388458290|gb|AFK31011.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1248 bits (3229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 736/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VI+LEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVINLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|39777291|gb|AAR30915.1| phytochrome B [Sorghum bicolor subsp. x drummondii]
Length = 1177
Score = 1248 bits (3229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/943 (63%), Positives = 740/943 (78%), Gaps = 24/943 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+YS+S+ +PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 70 VAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 129
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL------IGIDARTLFTPPSGASL 151
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P S L
Sbjct: 130 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPSSAVLL 189
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
+A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQ
Sbjct: 190 ERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 247
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQKLAV AISRLQALPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 248 SQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRD 307
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
+LEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ + QPLCLV STLR+
Sbjct: 308 NLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGSTLRA 367
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPF 379
PHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR IPF
Sbjct: 368 PHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRCIPF 427
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 428 PLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMD 487
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYY G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GAA L
Sbjct: 488 LVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGAAAL 547
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 548 GDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 607
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELSSV 616
K+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G++ELSSV
Sbjct: 608 KSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINELSSV 667
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
A EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES+ V
Sbjct: 668 AREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEEIV 727
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ RAL GEEDKNVE+KL+ F ++ + ++++VNAC+SRDY N+ GVCFVGQD+T
Sbjct: 728 EKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQDVTG 787
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
+KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CSEWN AMEK+TGW R EV+GK
Sbjct: 788 QKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVVGKF 847
Query: 797 LPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTD 856
L E+FG+FCR+KG D LTKFM++++ I GQ E FPF FF++ G++V+ LTA+ R+
Sbjct: 848 LIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANTRSK 907
Query: 857 AEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKL 916
+GK IG FCF+QI ++Q A E Q ++ YA++KELAYI QE+KNPL+GIRF + L
Sbjct: 908 MDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSL 967
Query: 917 LESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
L+ + ++++QRQ+LET ACE+Q+ I+ L+ IE+G V
Sbjct: 968 LQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVL 1010
>gi|242041157|ref|XP_002467973.1| hypothetical protein SORBIDRAFT_01g037340 [Sorghum bicolor]
gi|39777261|gb|AAR30900.1| phytochrome B [Sorghum bicolor]
gi|39777263|gb|AAR30901.1| phytochrome B [Sorghum bicolor]
gi|39777265|gb|AAR30902.1| phytochrome B [Sorghum bicolor]
gi|39777269|gb|AAR30904.1| phytochrome B [Sorghum bicolor]
gi|39777275|gb|AAR30907.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777277|gb|AAR30908.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777279|gb|AAR30909.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777281|gb|AAR30910.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777283|gb|AAR30911.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777285|gb|AAR30912.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777287|gb|AAR30913.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|241921827|gb|EER94971.1| hypothetical protein SORBIDRAFT_01g037340 [Sorghum bicolor]
Length = 1178
Score = 1248 bits (3229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/943 (63%), Positives = 740/943 (78%), Gaps = 24/943 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+YS+S+ +PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 71 VAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 130
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL------IGIDARTLFTPPSGASL 151
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P S L
Sbjct: 131 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPSSAVLL 190
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
+A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQ
Sbjct: 191 ERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 248
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQKLAV AISRLQALPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 249 SQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRD 308
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
+LEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ + QPLCLV STLR+
Sbjct: 309 NLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGSTLRA 368
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPF 379
PHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR IPF
Sbjct: 369 PHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRCIPF 428
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 429 PLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMD 488
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYY G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GAA L
Sbjct: 489 LVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGAAAL 548
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 549 GDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 608
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELSSV 616
K+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G++ELSSV
Sbjct: 609 KSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINELSSV 668
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
A EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES+ V
Sbjct: 669 AREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEEIV 728
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ RAL GEEDKNVE+KL+ F ++ + ++++VNAC+SRDY N+ GVCFVGQD+T
Sbjct: 729 EKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQDVTG 788
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
+KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CSEWN AMEK+TGW R EV+GK
Sbjct: 789 QKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVVGKF 848
Query: 797 LPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTD 856
L E+FG+FCR+KG D LTKFM++++ I GQ E FPF FF++ G++V+ LTA+ R+
Sbjct: 849 LIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANTRSK 908
Query: 857 AEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKL 916
+GK IG FCF+QI ++Q A E Q ++ YA++KELAYI QE+KNPL+GIRF + L
Sbjct: 909 MDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSL 968
Query: 917 LESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
L+ + ++++QRQ+LET ACE+Q+ I+ L+ IE+G V
Sbjct: 969 LQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVL 1011
>gi|39777289|gb|AAR30914.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
Length = 1178
Score = 1248 bits (3229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/943 (63%), Positives = 740/943 (78%), Gaps = 24/943 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+YS+S+ +PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 71 VAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 130
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL------IGIDARTLFTPPSGASL 151
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P S L
Sbjct: 131 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPSSAVLL 190
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
+A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQ
Sbjct: 191 ERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 248
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQKLAV AISRLQALPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 249 SQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRD 308
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
+LEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ + QPLCLV STLR+
Sbjct: 309 NLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGSTLRA 368
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPF 379
PHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR IPF
Sbjct: 369 PHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRCIPF 428
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 429 PLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMD 488
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYY G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GAA L
Sbjct: 489 LVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGAAAL 548
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 549 GDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 608
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELSSV 616
K+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G++ELSSV
Sbjct: 609 KSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINELSSV 668
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
A EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES+ V
Sbjct: 669 AREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEEIV 728
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ RAL GEEDKNVE+KL+ F ++ + ++++VNAC+SRDY N+ GVCFVGQD+T
Sbjct: 729 EKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQDVTG 788
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
+KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CSEWN AMEK+TGW R EV+GK
Sbjct: 789 QKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVVGKF 848
Query: 797 LPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTD 856
L E+FG+FCR+KG D LTKFM++++ I GQ E FPF FF++ G++V+ LTA+ R+
Sbjct: 849 LIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANTRSK 908
Query: 857 AEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKL 916
+GK IG FCF+QI ++Q A E Q ++ YA++KELAYI QE+KNPL+GIRF + L
Sbjct: 909 MDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSL 968
Query: 917 LESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
L+ + ++++QRQ+LET ACE+Q+ I+ L+ IE+G V
Sbjct: 969 LQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVL 1011
>gi|297600820|ref|NP_001049910.2| Os03g0309200 [Oryza sativa Japonica Group]
gi|255674454|dbj|BAF11824.2| Os03g0309200, partial [Oryza sativa Japonica Group]
Length = 1120
Score = 1248 bits (3229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/953 (63%), Positives = 740/953 (77%), Gaps = 27/953 (2%)
Query: 32 VNKGKTIID-HYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRG 90
V +GK Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRG
Sbjct: 3 VRRGKNRTHPQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRG 62
Query: 91 GLIQPFGCMLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTL 142
G IQPFGC LAV ++ +FR++ YSEN ++LDL L+ +G DAR L
Sbjct: 63 GHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLL 122
Query: 143 FTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDP 202
F P S L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DP
Sbjct: 123 FAPSSAVLLERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDP 180
Query: 203 ALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHG 262
ALS+AGAVQSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HG
Sbjct: 181 ALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHG 240
Query: 263 EVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPL 322
EVV+E RR++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPL
Sbjct: 241 EVVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPL 300
Query: 323 CLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVC 369
CLV STLRSPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVC
Sbjct: 301 CLVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVC 360
Query: 370 HHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFS 429
HHTSPR IPFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P
Sbjct: 361 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 420
Query: 430 IVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLA 489
IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA
Sbjct: 421 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 480
Query: 490 EAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPR 549
+AGYPGAA LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPR
Sbjct: 481 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 540
Query: 550 SSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSK 606
SSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +
Sbjct: 541 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 600
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
++G+DELSSVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++
Sbjct: 601 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 660
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
++ +ES+ V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ G
Sbjct: 661 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 720
Query: 727 VCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTG 786
VCFVGQD+T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TG
Sbjct: 721 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 780
Query: 787 WMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVE 846
W R EV+GK+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+
Sbjct: 781 WSRGEVVGKLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQ 840
Query: 847 VALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNP 906
LTA+ R+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNP
Sbjct: 841 ALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNP 900
Query: 907 LNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LNGIRF + LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 901 LNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 953
>gi|388458336|gb|AFK31034.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1248 bits (3229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ L+CDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLICDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESGE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS A E+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTASEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458354|gb|AFK31043.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1248 bits (3229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPIPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+ IDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVAIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDT+VE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTIVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKPFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458302|gb|AFK31017.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1248 bits (3228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TENKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458228|gb|AFK30980.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1248 bits (3228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RF F+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFPFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458374|gb|AFK31053.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1248 bits (3228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CC EWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCLEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|11134029|sp|P93527.2|PHYB_SORBI RecName: Full=Phytochrome B
gi|7110162|gb|AAB41398.2| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 1247 bits (3227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/943 (63%), Positives = 739/943 (78%), Gaps = 24/943 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+YS+S+ +PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 71 VAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 130
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL------IGIDARTLFTPPSGASL 151
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P S L
Sbjct: 131 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPSSAVLL 190
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
+A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQ
Sbjct: 191 ERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 248
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQKLAV AISRLQALPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 249 SQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRD 308
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
+LEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ + QPLCLV STLR+
Sbjct: 309 NLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGSTLRA 368
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPF 379
PHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR IPF
Sbjct: 369 PHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRCIPF 428
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 429 PLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMD 488
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYY G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GAA L
Sbjct: 489 LVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGAAAL 548
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 549 GDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 608
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELSSV 616
K+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G++ELSSV
Sbjct: 609 KSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINELSSV 668
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
A EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES+ V
Sbjct: 669 AREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEEIV 728
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ RAL GEEDKNVE+KL+ F ++ + ++++VNAC+SRDY N+ GVCFVGQD+T
Sbjct: 729 EKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQDVTG 788
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
+KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CSEWN AMEK+TGW R EV+GK
Sbjct: 789 QKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVVGKF 848
Query: 797 LPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTD 856
L E+FG+FCR+KG D LTKFM++++ I GQ E FPF FF++ G++V+ LTA+ R+
Sbjct: 849 LIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANTRSK 908
Query: 857 AEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKL 916
+GK IG FCF+QI ++Q A E Q ++ YA++KELAYI QE+KNPL+GIRF + L
Sbjct: 909 MDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSL 968
Query: 917 LESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
L+ + ++++QRQ+LET ACE Q+ I+ L+ IE+G V
Sbjct: 969 LQMTDLNDDQRQFLETCSACEEQMSKIVKDATLQSIEDGSLVL 1011
>gi|388458344|gb|AFK31038.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1247 bits (3226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+ A DIPQA+RFLF+QN VRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYFATDIPQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458352|gb|AFK31042.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1247 bits (3226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLL D+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLWDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458252|gb|AFK30992.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1247 bits (3226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRL ALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLHALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPH CH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHDCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458340|gb|AFK31036.1| phytochrome b, partial [Oryza rufipogon]
gi|388458342|gb|AFK31037.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1247 bits (3226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+ A DIPQA+RFLF+QN VRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYFATDIPQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458246|gb|AFK30989.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1247 bits (3226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A F QS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFGQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHR+DVG+VIDLEP+++ DPALS+AGA
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRVDVGVVIDLEPARTEDPALSIAGAA 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSK-------------DSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSILSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458356|gb|AFK31044.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1247 bits (3226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/945 (63%), Positives = 734/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL ME +A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMECSLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458274|gb|AFK31003.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1246 bits (3225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/945 (63%), Positives = 734/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEF +QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD P IVTQSPSI
Sbjct: 420 PFPLRYACEFFMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDTPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+K+I WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKNIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458298|gb|AFK31015.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1246 bits (3225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G +AR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGANARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CC EWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCLEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458266|gb|AFK30999.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1246 bits (3224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFYYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G +AR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGANARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TENRLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|39777293|gb|AAR30916.1| phytochrome B [Sorghum propinquum]
Length = 1177
Score = 1246 bits (3224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/943 (63%), Positives = 739/943 (78%), Gaps = 24/943 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+YS+S+ +PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 70 VAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 129
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL------IGIDARTLFTPPSGASL 151
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P S L
Sbjct: 130 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPHVSLGADARLLFSPSSAVLL 189
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
+A A+REISLLNP+ +HS R PFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQ
Sbjct: 190 ERAFAAREISLLNPLWIHS--RVSSNPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 247
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQKLAV AISRLQALPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 248 SQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRD 307
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
+LEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ + QPLCLV STLR+
Sbjct: 308 NLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGSTLRA 367
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPF 379
PHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR IPF
Sbjct: 368 PHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRCIPF 427
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 428 PLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMD 487
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYY G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GAA L
Sbjct: 488 LVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGAAAL 547
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 548 GDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 607
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELSSV 616
K+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G++ELSSV
Sbjct: 608 KSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINELSSV 667
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
A EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES+ V
Sbjct: 668 AREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEEIV 727
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ RAL GEEDKNVE+KL+ F ++ + ++++VNAC+SRDY N+ GVCFVGQD+T
Sbjct: 728 EKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQDVTG 787
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
+KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CSEWN AMEK+TGW R EV+GK
Sbjct: 788 QKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVVGKF 847
Query: 797 LPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTD 856
L E+FG+FCR+KG D LTKFM++++ I GQ E FPF FF++ G++V+ LTA+ R+
Sbjct: 848 LIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANTRSK 907
Query: 857 AEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKL 916
+GK IG FCF+QI ++Q A E Q ++ YA++KELAYI QE+KNPL+GIRF + L
Sbjct: 908 MDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSL 967
Query: 917 LESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
L+ + ++++QRQ+LET ACE+Q+ I+ L+ IE+G V
Sbjct: 968 LQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVL 1010
>gi|388458226|gb|AFK30979.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1246 bits (3224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHS Q+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSSQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPL+GIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRPHEKKCYARMKELAYIFQEIKNPLHGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458338|gb|AFK31035.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1246 bits (3223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/945 (63%), Positives = 734/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+ A DIPQA+RFLF+QN VRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYFATDIPQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ +++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPTFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458326|gb|AFK31029.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1246 bits (3223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/945 (63%), Positives = 734/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QP CLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPQCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFW RSHTAKE+KWGGAKHHPE KD+G +MH RSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWIRSHTAKEIKWGGAKHHPEDKDDGQRMHSRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKPFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458314|gb|AFK31023.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1246 bits (3223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/945 (63%), Positives = 734/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTS R I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSARCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TENKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|297836762|ref|XP_002886263.1| phytochrome B [Arabidopsis lyrata subsp. lyrata]
gi|297332103|gb|EFH62522.1| phytochrome B [Arabidopsis lyrata subsp. lyrata]
Length = 1163
Score = 1245 bits (3222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/967 (62%), Positives = 745/967 (77%), Gaps = 25/967 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV 68
TTN+ GG S ++P I Y DA L A FEQS SGKSF+YS+S+
Sbjct: 21 TTNNRRGGEQAQ--SSGTKSLRPRESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSL 78
Query: 69 ISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS 126
+ G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L +S
Sbjct: 79 KTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQS 138
Query: 127 ----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAI 182
E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPFYAI
Sbjct: 139 VPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPFYAI 195
Query: 183 LHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
LHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V
Sbjct: 196 LHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESV 255
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI
Sbjct: 256 RDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMI 315
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS----- 357
DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 316 VDCNAKPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDG 375
Query: 358 ------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNI 411
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +
Sbjct: 376 SNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRV 435
Query: 412 LRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAW 471
LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD+
Sbjct: 436 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVE 495
Query: 472 WLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWG 531
WLL NH D TGLSTDSL +AGYP AA LG AVCGMA A IT +DFLFWFRSHTAKE+KWG
Sbjct: 496 WLLANHADSTGLSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 555
Query: 532 GAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEE 591
GAKHHPE KD+G +MHPR SF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 556 GAKHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAA 615
Query: 592 NDSK-VQGNTQ--QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
+SK V G Q ++ + QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+A
Sbjct: 616 MNSKAVDGAVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIA 675
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q V
Sbjct: 676 ELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAV 735
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+
Sbjct: 736 FVVVNACFSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAA 795
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EVIGKML E+FG+ C +KG D LTKFMI+L+ I GQ
Sbjct: 796 DENTCCLEWNMAMEKLTGWSRSEVIGKMLVGEVFGSCCMLKGPDALTKFMIVLHNAIGGQ 855
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ FPF FF+R G+FV+ LTA++R +GKVIG FCF+QI P+LQ AL Q +D +
Sbjct: 856 ETDKFPFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTE 915
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+ K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+ MD
Sbjct: 916 CFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMD 975
Query: 949 LRCIEEG 955
L IE+G
Sbjct: 976 LESIEDG 982
>gi|388458224|gb|AFK30978.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1245 bits (3222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/945 (63%), Positives = 734/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+V DLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVNDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QS KLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSLKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|39777271|gb|AAR30905.1| phytochrome B [Sorghum bicolor]
gi|39777273|gb|AAR30906.1| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 1245 bits (3222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/943 (63%), Positives = 739/943 (78%), Gaps = 24/943 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+YS+S+ +PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 71 VAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 130
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL------IGIDARTLFTPPSGASL 151
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P S L
Sbjct: 131 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPSSAVLL 190
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
+A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQ
Sbjct: 191 ERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 248
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQKLAV AISRLQALPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 249 SQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRD 308
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
+LEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ + QPLCLV STLR+
Sbjct: 309 NLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGSTLRA 368
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPF 379
PHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR IPF
Sbjct: 369 PHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRCIPF 428
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 429 PLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMD 488
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYY G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GAA L
Sbjct: 489 LVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGAAAL 548
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 549 GDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 608
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELSSV 616
K+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G++ELSSV
Sbjct: 609 KSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQAQLGELELRGINELSSV 668
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES+ V
Sbjct: 669 PREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEEIV 728
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ RAL GEEDKNVE+KL+ F ++ + ++++VNAC+SRDY N+ GVCFVGQD+T
Sbjct: 729 EKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQDVTG 788
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
+KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CSEWN AMEK+TGW R EV+GK
Sbjct: 789 QKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVVGKF 848
Query: 797 LPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTD 856
L E+FG+FCR+KG D LTKFM++++ I GQ E FPF FF++ G++V+ LTA+ R+
Sbjct: 849 LIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANTRSK 908
Query: 857 AEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKL 916
+GK IG FCF+QI ++Q A E Q ++ YA++KELAYI QE+KNPL+GIRF + L
Sbjct: 909 MDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSL 968
Query: 917 LESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
L+ + ++++QRQ+LET ACE+Q+ I+ L+ IE+G V
Sbjct: 969 LQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVL 1011
>gi|388458214|gb|AFK30973.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458222|gb|AFK30977.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1245 bits (3221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/945 (63%), Positives = 734/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VI LEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIGLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ L CDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLPCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|78643948|emb|CAJ21337.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1244 bits (3220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/967 (62%), Positives = 740/967 (76%), Gaps = 18/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR I Y+EN M
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRGIAYNENAKNMR 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L K +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGGDVRILFRPSSAVLLEKTFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN A+EK+TGW R EV+GKML E+FG+ CR+KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKK 894
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 895 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 954
Query: 949 LRCIEEG 955
L IE G
Sbjct: 955 LESIENG 961
>gi|57791646|gb|AAW56591.1| phytochrome B [Arabidopsis lyrata]
Length = 1160
Score = 1244 bits (3220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/967 (62%), Positives = 745/967 (77%), Gaps = 25/967 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV 68
TTN+ GG S ++P I Y DA L A FEQS SGKSF+YS+S+
Sbjct: 18 TTNNRRGGEQAQ--SSGTKSLRPRESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSL 75
Query: 69 ISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS 126
+ G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML L +S
Sbjct: 76 KTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQS 135
Query: 127 ----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAI 182
E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPFYAI
Sbjct: 136 VPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPFYAI 192
Query: 183 LHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
LHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V
Sbjct: 193 LHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESV 252
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI
Sbjct: 253 RDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMI 312
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS----- 357
DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 313 VDCNAKPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDG 372
Query: 358 ------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNI 411
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +
Sbjct: 373 SNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRV 432
Query: 412 LRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAW 471
LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD+
Sbjct: 433 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVE 492
Query: 472 WLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWG 531
WLL NH D TGLSTDSL +AGYP AA LG AVCGMA A IT +DFLFWFRSHTAKE+KWG
Sbjct: 493 WLLANHADSTGLSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWG 552
Query: 532 GAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEE 591
GAKHHPE KD+G +MHPR SF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 553 GAKHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAA 612
Query: 592 NDSK-VQGNTQ--QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
+SK V G Q ++ + QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+A
Sbjct: 613 MNSKAVDGAVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIA 672
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q V
Sbjct: 673 ELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAV 732
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+
Sbjct: 733 FVVVNACFSKDYLNNIVGVCFVGQDVTGQKLVMDKFINIQGDYKAIVHSPNPLIPPIFAA 792
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EVIGKML E+FG+ C +KG D LTKFMI+L+ I GQ
Sbjct: 793 DENTCCLEWNMAMEKLTGWSRSEVIGKMLVGEVFGSCCMLKGPDALTKFMIVLHNAIGGQ 852
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ FPF FF+R G+FV+ LTA++R +GKVIG FCF+QI P+LQ AL Q +D +
Sbjct: 853 ETDKFPFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTE 912
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+ K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+ MD
Sbjct: 913 CFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMD 972
Query: 949 LRCIEEG 955
L IE+G
Sbjct: 973 LESIEDG 979
>gi|78643950|emb|CAJ21338.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1244 bits (3220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/967 (62%), Positives = 740/967 (76%), Gaps = 18/967 (1%)
Query: 1 MGLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGK 60
M Q R++ ++ + P I Y DA L A FEQS +GK
Sbjct: 1 MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK 60
Query: 61 SFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEML 120
SF+YS+SV +P + VPEEQITAYLSKIQRGG IQPFGCM+A +E +FR I Y+EN M
Sbjct: 61 SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRGIAYNENAKNMR 120
Query: 121 DLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIE 176
L +S E E+ +G D R LF P S L K +REI+LLNPI +HS +
Sbjct: 121 GLTPQSVPSLEKQEIL-FVGGDVRILFRPSSAVLLEKTFGAREITLLNPIWIHSKNSG-- 177
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCD
Sbjct: 178 KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCD 237
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
TVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+P+ DIPQA+RFLFKQ
Sbjct: 238 TVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQ 297
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
NRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHGCH QYM NMGSIASL MAVII
Sbjct: 298 NRVRMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIY 357
Query: 357 SKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
D SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 358 GNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLE 417
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAALYY G+ + +GVTPTE+Q+KD
Sbjct: 418 KHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKD 477
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A I +DFLFWFRSHTAKEV
Sbjct: 478 IVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEV 537
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++
Sbjct: 538 KWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDA 597
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
E N V N Q ++QG+DELSSVA EMVRLIETATAPIF VD G INGWNAKVA
Sbjct: 598 EATNSKAVVHN-QLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVA 656
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ ++V++E + V+ LI RA+ GEEDKNVE+KLR F + Q V
Sbjct: 657 ELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAV 716
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +KV+MDK++ +QGDY+AI+ S NP IPPIFAS
Sbjct: 717 FVVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFAS 776
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
DEN CC EWN AMEK+TGW R EV+GKML E+FG+ C++KG D LTKFMI L+ I G
Sbjct: 777 DENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCKLKGPDALTKFMIALHNAIGGI 836
Query: 829 GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMD 888
T+ PF FF+R + V+ LTA++R + +IG FCF+QI P+LQP+L+ Q ++
Sbjct: 837 DTDKLPFSFFDRNEKNVQTLLTANKRVNI--NIIGAFCFLQIASPELQPSLKVQKQQEKK 894
Query: 889 IYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS ACE+QI+ II +D
Sbjct: 895 SFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDID 954
Query: 949 LRCIEEG 955
L IE G
Sbjct: 955 LESIENG 961
>gi|388458360|gb|AFK31046.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1243 bits (3217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/945 (63%), Positives = 734/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSDASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+L WFRSHTAKE+KWGGAKHHPE KD+G +M PRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLSWFRSHTAKEIKWGGAKHHPEDKDDGQRMRPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458240|gb|AFK30986.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1242 bits (3214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/945 (63%), Positives = 733/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVV V++L GYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVGHVRELIGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF V + G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVGTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458358|gb|AFK31045.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1242 bits (3213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/945 (63%), Positives = 735/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SP+GC+ QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPNGCYAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLST SLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTVSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|6469491|emb|CAA40795.2| phytochrome B [Oryza sativa Indica Group]
Length = 1171
Score = 1241 bits (3210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/945 (63%), Positives = 733/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R PFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSNPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLVVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHGQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRT LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTGTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 DLGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC++RDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSTRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|388458208|gb|AFK30970.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1240 bits (3209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/945 (63%), Positives = 733/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VI LEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIGLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ L CDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLPCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
S+LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 SNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKL GLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSTPSAMKLRGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQALLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGY GAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYSGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>gi|293336623|ref|NP_001168077.1| phytochromeB2 [Zea mays]
gi|37926881|gb|AAP06789.1| phytochrome B2 apoprotein [Zea mays]
gi|413955930|gb|AFW88579.1| phytochromeB2 [Zea mays]
Length = 1166
Score = 1239 bits (3205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/943 (62%), Positives = 736/943 (78%), Gaps = 24/943 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ YN DA L A FEQS ASG+SF+YS+S+ +PP E+QI AYLS+IQRGG IQP GC
Sbjct: 56 VAQYNLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPLGC 115
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL------IGIDARTLFTPPSGASL 151
LAV ++ +FR++ +SEN ++LDL L+ + +G DAR F+P S L
Sbjct: 116 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSVALPPVSLGADARLYFSPSSAVLL 175
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
+A A+REISLLNP+ +HS R+ KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQ
Sbjct: 176 ERAFAAREISLLNPLWIHS--RASSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 233
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 234 SQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHEDEHGEVVAESRRD 293
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
+LEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHAIPV VIQ L Q LCLV STLR+
Sbjct: 294 NLEPYLGLHYPATDIPQASRFLFQQNRVRMIADCHAIPVRVIQDPGLSQQLCLVGSTLRA 353
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPF 379
PHGCH QYM NMGSIASLVMAVII+S SMKLWGLVVCHHTSPR IPF
Sbjct: 354 PHGCHAQYMANMGSIASLVMAVIISSGGDDERTGRGAISSSMKLWGLVVCHHTSPRCIPF 413
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P I+TQSPS+MD
Sbjct: 414 PLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPAGIITQSPSVMD 473
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYY G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GA L
Sbjct: 474 LVKCDGAALYYRGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGAVAL 533
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 534 GDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 593
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELSSV 616
K+RS WE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G++ELSSV
Sbjct: 594 KSRSLSWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQRQLGELELRGINELSSV 653
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
A EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +E V
Sbjct: 654 AREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKECDDIV 713
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ RAL GEEDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+T
Sbjct: 714 EKLLSRALRGEEDKNVEIKLKTFGSEQSKGAIFVIVNACSSRDYTQNIVGVCFVGQDVTG 773
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
+KV+MDKFI +QGDY+AI+ + NPL+PPIFASDEN CSEWN AMEK+TGW R EV+GK
Sbjct: 774 QKVVMDKFINIQGDYKAIVHNPNPLLPPIFASDENTSCSEWNTAMEKLTGWSREEVVGKF 833
Query: 797 LPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTD 856
L E+FGN CR+KG D LTKFM++++ I G +E FPF FF++ G++V+ LTA+ R+
Sbjct: 834 LIGEVFGNCCRLKGPDALTKFMVVIHNAIEGHDSEKFPFSFFDKNGKYVQALLTANTRSK 893
Query: 857 AEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKL 916
+GK IG FCF+QI ++Q A E Q ++ YA++KELAYI QE+KNPL+GIRF + L
Sbjct: 894 MDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSL 953
Query: 917 LESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
L+ + ++++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 954 LQMTDLNDDQRQFLETSSACEKQMSKIVKDASLKSIEDGSLVL 996
>gi|57791679|gb|AAW56607.1| phytochrome B [Cleome hassleriana]
Length = 1045
Score = 1238 bits (3203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/917 (64%), Positives = 726/917 (79%), Gaps = 23/917 (2%)
Query: 58 SGKSFNYSRSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSEN 115
SGKSF+YSRS+ + G VPE+QITAYLSKIQRGG IQPFGCM+AV+E TF+II YSEN
Sbjct: 3 SGKSFDYSRSLKTTTYGSSVPEKQITAYLSKIQRGGYIQPFGCMIAVDESTFKIISYSEN 62
Query: 116 CLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSN 171
EML L +S E E+ IG D R+LFTP S L +A +REI+LLNP+ +HS
Sbjct: 63 AREMLGLMPQSVPSIEKPEILA-IGTDVRSLFTPSSTVLLERAFVAREITLLNPVWIHS- 120
Query: 172 SRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDI 231
++ KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI
Sbjct: 121 -KNTGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDI 179
Query: 232 GLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAAR 291
LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+DLEPY+G+H+PA DIPQA+R
Sbjct: 180 KLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRADLEPYIGLHYPATDIPQASR 239
Query: 292 FLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVM 351
FLFKQNRVRMI DCHA PV VIQ + L QPLCLV STLR+PHGCH QYM NMGS+ASL M
Sbjct: 240 FLFKQNRVRMIVDCHATPVCVIQDERLTQPLCLVGSTLRAPHGCHAQYMANMGSLASLAM 299
Query: 352 AVIINS-----------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMEL 400
AVIIN ++SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MEL
Sbjct: 300 AVIINGNEEEAGSVAGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMEL 359
Query: 401 QVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVT 460
Q+A+Q++EK +LRTQ LLCDMLLRD+P IVTQ PSIMDLVKCDGAA Y GR + +GV
Sbjct: 360 QLALQMSEKRVLRTQTLLCDMLLRDSPTGIVTQKPSIMDLVKCDGAAFLYQGRYYPLGVA 419
Query: 461 PTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWF 520
P+E+Q+KDI WLL NHGD TGLSTDSLA+AGYPGAA LG AVCGMA A IT KDFLFWF
Sbjct: 420 PSEAQIKDIVEWLLANHGDSTGLSTDSLADAGYPGAATLGDAVCGMAVAYITRKDFLFWF 479
Query: 521 RSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIV 580
RSHTAKE+KWGGAKHHPE KD+ +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ++
Sbjct: 480 RSHTAKEIKWGGAKHHPEDKDDSQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLI 539
Query: 581 MRDSFQEMEEENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSG 638
+RDSF+E E N ++V Q G M QG+DELS+VA EMVRLIETAT PI VD G
Sbjct: 540 LRDSFKESETVN-TRVAVRADQPGGDMAVQGLDELSAVAREMVRLIETATVPILAVDVEG 598
Query: 639 TINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRK 698
INGWN K+AELTGL EAMGKSL+ +++++E + VE L+ AL GEEDKNVE+K++
Sbjct: 599 RINGWNGKIAELTGLSVEEAMGKSLVRDLIYKEYEETVEKLLSHALRGEEDKNVEIKMKT 658
Query: 699 FELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSV 758
F + + V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S
Sbjct: 659 FSRELEGQAVFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIVHSP 718
Query: 759 NPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFM 818
NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGKML E+FG+ CR+KG D LTKFM
Sbjct: 719 NPLIPPIFAADENTCCLEWNTAMEKLTGWSRAEVIGKMLVGEVFGSCCRLKGPDTLTKFM 778
Query: 819 ILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPA 878
I+L+ I G+ T+ F F FF+R G+FV+ LTA++R +GK+ G FCFMQI P+LQ A
Sbjct: 779 IVLHNAIGGEETDKFSFPFFDRNGKFVQALLTANKRVSIDGKITGAFCFMQIPSPELQQA 838
Query: 879 LEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACER 938
L Q ++ + ++ KELAYI Q +KNPL+G+RF + LLE++ +SE+Q+Q LETS +CE+
Sbjct: 839 LAVQRQQETECISRAKELAYICQVIKNPLSGLRFTNLLLEATGLSEDQKQLLETSVSCEK 898
Query: 939 QIMTIIDGMDLRCIEEG 955
QI II M+L IE+G
Sbjct: 899 QISRIIGDMNLETIEDG 915
>gi|124359940|gb|ABN07956.1| GAF; Heavy metal sensor kinase [Medicago truncatula]
Length = 1152
Score = 1235 bits (3196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/930 (64%), Positives = 734/930 (78%), Gaps = 30/930 (3%)
Query: 36 KTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQITAYLSKIQRGG 91
K I Y DA L A FEQS G SF+YS+S+ + + VPE+QITAYL+KIQRGG
Sbjct: 45 KKAIAQYTEDARLHAVFEQS---GDSFDYSQSIRLTTAAHSQSVPEQQITAYLAKIQRGG 101
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-------EDFELNGL-IGIDARTLF 143
IQPFG M+AV+EP+FR++ YSEN +ML + +S ++ +G IG D R+LF
Sbjct: 102 FIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRSLF 161
Query: 144 TPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPA 203
T SG L KA A+REISL+NPI +HS RS KPFY ILHRIDVG+VIDLEP++S DPA
Sbjct: 162 THSSGVLLEKAFAAREISLMNPIWIHS--RSTGKPFYGILHRIDVGVVIDLEPARSEDPA 219
Query: 204 LSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGE 263
LS+AGAVQSQKLAV AIS+LQ+LPGGD+ +LCD VVE V++LTGYDRVM+Y FH+D+HGE
Sbjct: 220 LSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGE 279
Query: 264 VVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLC 323
VV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V Q + L QP+C
Sbjct: 280 VVAESKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVC 339
Query: 324 LVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD------------SMKLWGLVVCHH 371
LV STLR+PHGCH QYM NMGSIASL MAVIIN D SM+LWGLVVCHH
Sbjct: 340 LVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHH 399
Query: 372 TSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIV 431
TS R IPFPLRYACEFL+QAF LQL MELQ+A Q EK +LRTQ LLCDMLLRD+P IV
Sbjct: 400 TSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIV 459
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
TQSPSIMDLVKC+GAAL+Y G + +GVTPTESQ++DI WLL HGD TGLSTDSLA+A
Sbjct: 460 TQSPSIMDLVKCNGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADA 519
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG AVCGMA A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSS
Sbjct: 520 GYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 579
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVD 611
FKAFLEVVK+RS W+ +E++AIHSLQ+++RDSF+E E NDSK +T ++QGVD
Sbjct: 580 FKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAEN-NDSKAVVHTHMAELELQGVD 638
Query: 612 ELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEE 671
ELSSVA EMVRLIETATAPIF VD +G INGWNAKV+ELTGL +AMGKSL+ ++V++E
Sbjct: 639 ELSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKE 698
Query: 672 SQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVG 731
SQ V+ L+ AL GEEDKNVE+K+R F Q+ V+I+VNAC+S+DY NN+ GVCFVG
Sbjct: 699 SQETVDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVG 758
Query: 732 QDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHE 791
QD+T +KV+MDKFI +QGDY+AI+ S N LIPPIFASD+N CC EWN AMEK++GW R +
Sbjct: 759 QDVTGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWNNAMEKLSGWSRTD 818
Query: 792 VIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
VIGK+L E+FG+FC++KG D +TKFMI+L+ + GQ T+ FPF F +R G+FV+ LTA
Sbjct: 819 VIGKLLVGEVFGSFCQLKGSDAMTKFMIVLHNALGGQDTDKFPFSFVDRHGKFVQTFLTA 878
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R + +G++IG FCF+QI+ P+LQ AL Q +D +A++KELAYI QEVKNPL+GIR
Sbjct: 879 NKRVNMDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAYICQEVKNPLSGIR 938
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIM 941
F + LLES+ +++ Q+Q LETS ACE+Q++
Sbjct: 939 FTNSLLESTCLTDEQKQLLETSVACEKQML 968
>gi|357448917|ref|XP_003594734.1| Phytochrome b1 [Medicago truncatula]
gi|355483782|gb|AES64985.1| Phytochrome b1 [Medicago truncatula]
Length = 1198
Score = 1235 bits (3195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/930 (64%), Positives = 734/930 (78%), Gaps = 30/930 (3%)
Query: 36 KTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQITAYLSKIQRGG 91
K I Y DA L A FEQS G SF+YS+S+ + + VPE+QITAYL+KIQRGG
Sbjct: 45 KKAIAQYTEDARLHAVFEQS---GDSFDYSQSIRLTTAAHSQSVPEQQITAYLAKIQRGG 101
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-------EDFELNGL-IGIDARTLF 143
IQPFG M+AV+EP+FR++ YSEN +ML + +S ++ +G IG D R+LF
Sbjct: 102 FIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRSLF 161
Query: 144 TPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPA 203
T SG L KA A+REISL+NPI +HS RS KPFY ILHRIDVG+VIDLEP++S DPA
Sbjct: 162 THSSGVLLEKAFAAREISLMNPIWIHS--RSTGKPFYGILHRIDVGVVIDLEPARSEDPA 219
Query: 204 LSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGE 263
LS+AGAVQSQKLAV AIS+LQ+LPGGD+ +LCD VVE V++LTGYDRVM+Y FH+D+HGE
Sbjct: 220 LSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGE 279
Query: 264 VVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLC 323
VV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V Q + L QP+C
Sbjct: 280 VVAESKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVC 339
Query: 324 LVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD------------SMKLWGLVVCHH 371
LV STLR+PHGCH QYM NMGSIASL MAVIIN D SM+LWGLVVCHH
Sbjct: 340 LVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHH 399
Query: 372 TSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIV 431
TS R IPFPLRYACEFL+QAF LQL MELQ+A Q EK +LRTQ LLCDMLLRD+P IV
Sbjct: 400 TSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIV 459
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
TQSPSIMDLVKC+GAAL+Y G + +GVTPTESQ++DI WLL HGD TGLSTDSLA+A
Sbjct: 460 TQSPSIMDLVKCNGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADA 519
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG AVCGMA A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSS
Sbjct: 520 GYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 579
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVD 611
FKAFLEVVK+RS W+ +E++AIHSLQ+++RDSF+E E NDSK +T ++QGVD
Sbjct: 580 FKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKE-AENNDSKAVVHTHMAELELQGVD 638
Query: 612 ELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEE 671
ELSSVA EMVRLIETATAPIF VD +G INGWNAKV+ELTGL +AMGKSL+ ++V++E
Sbjct: 639 ELSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKE 698
Query: 672 SQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVG 731
SQ V+ L+ AL GEEDKNVE+K+R F Q+ V+I+VNAC+S+DY NN+ GVCFVG
Sbjct: 699 SQETVDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVG 758
Query: 732 QDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHE 791
QD+T +KV+MDKFI +QGDY+AI+ S N LIPPIFASD+N CC EWN AMEK++GW R +
Sbjct: 759 QDVTGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWNNAMEKLSGWSRTD 818
Query: 792 VIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
VIGK+L E+FG+FC++KG D +TKFMI+L+ + GQ T+ FPF F +R G+FV+ LTA
Sbjct: 819 VIGKLLVGEVFGSFCQLKGSDAMTKFMIVLHNALGGQDTDKFPFSFVDRHGKFVQTFLTA 878
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R + +G++IG FCF+QI+ P+LQ AL Q +D +A++KELAYI QEVKNPL+GIR
Sbjct: 879 NKRVNMDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAYICQEVKNPLSGIR 938
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIM 941
F + LLES+ +++ Q+Q LETS ACE+Q++
Sbjct: 939 FTNSLLESTCLTDEQKQLLETSVACEKQML 968
>gi|302818893|ref|XP_002991119.1| hypothetical protein SELMODRAFT_161430 [Selaginella moellendorffii]
gi|300141213|gb|EFJ07927.1| hypothetical protein SELMODRAFT_161430 [Selaginella moellendorffii]
Length = 1143
Score = 1234 bits (3193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/956 (62%), Positives = 735/956 (76%), Gaps = 37/956 (3%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQR 89
+K + ADA L A +E+S SG SF+Y++SV S E +P + +TAYL ++QR
Sbjct: 16 SKHSVRVAQTTADAKLHAVYEESGESGDSFDYTKSVNATKSTGESIPAQAVTAYLQRMQR 75
Query: 90 GGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS------EDFELNGLIGIDARTLF 143
GGL+QPFGCMLAVEE +FR+I +S+N EMLDL +S +L G IG DAR+LF
Sbjct: 76 GGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGAGQQDLLG-IGSDARSLF 134
Query: 144 TPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPA 203
TP S ++L KAA + ++S+LNPI VH + + KPFYAI+HRIDVG+V+DLEP K+ D +
Sbjct: 135 TPASASALEKAAGAIDVSMLNPISVHCKTSA--KPFYAIVHRIDVGLVLDLEPVKASDTS 192
Query: 204 L-SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHG 262
+ S AGA+QS KLA AISRLQ+LPGGDIGLLCDTVVE+V++LTGYDRVM Y FHDD+HG
Sbjct: 193 VGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHDDEHG 252
Query: 263 EVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPL 322
EVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC A PV + Q K+L+QP+
Sbjct: 253 EVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAAPVKISQDKDLRQPI 312
Query: 323 CLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS--------------------MK 362
L STLR+PHGCH QYM NMGS+ASLVMAVIIN D K
Sbjct: 313 SLAGSTLRAPHGCHAQYMGNMGSVASLVMAVIINDNDDEYRSSSGGGGGGGGAYQQKGRK 372
Query: 363 LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDML 422
LWG+VVCHHTSPR +PFPLR ACEFL+Q F LQL ME+++A QL EK+ILRTQ LLCDML
Sbjct: 373 LWGMVVCHHTSPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDML 432
Query: 423 LRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTG 482
LRDAP IV+QSP+IMDLVKCDGAALYYG R WL+GVTP+E+Q+KDIA WLL +H D TG
Sbjct: 433 LRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGVTPSEAQIKDIADWLLEHHKDSTG 492
Query: 483 LSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDN 542
LSTDSLA+AGYPGAA LG VCGMA A+IT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+
Sbjct: 493 LSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHDPDDKDD 552
Query: 543 GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQ 602
G KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SF ++ +++D+K + +
Sbjct: 553 GRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFHDI-DDSDTKTMIHARL 611
Query: 603 NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKS 662
N K+QG+DELS+VA EMVRLIETATAPI VDSSG INGWNAKVAELTGLP +EAMG+S
Sbjct: 612 NDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVTEAMGRS 671
Query: 663 LIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKN 722
L ++V +ES VE L+ AL G+E++NVELKL+ F +QK V ++VNAC SRD +
Sbjct: 672 LAKDLVLQESADMVERLLYLALQGDEEQNVELKLKTFGVQKDKEAVILVVNACASRDVSD 731
Query: 723 NVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAME 782
NV GVCFVGQD+T +KV+MDKF R+QGDY+AI+Q+ NPLIPPIF +DE CSEWN AME
Sbjct: 732 NVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFGYCSEWNPAME 791
Query: 783 KVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFN 839
K++GW R EV+GKML EIFG +CR+KGQD +TKFMI+L GQ TE FPF FF+
Sbjct: 792 KLSGWKREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQDTEKFPFAFFD 851
Query: 840 RQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYI 899
RQG++VE LTA++R DAEG + G FCF+ I +LQ AL Q + +K+KELAYI
Sbjct: 852 RQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVALSKLKELAYI 911
Query: 900 RQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
RQE+KNPL GI F L+E++ +SE+Q+QY+ET CE+QI I+D MDL IE+G
Sbjct: 912 RQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDG 967
>gi|302819945|ref|XP_002991641.1| hypothetical protein SELMODRAFT_161807 [Selaginella moellendorffii]
gi|300140490|gb|EFJ07212.1| hypothetical protein SELMODRAFT_161807 [Selaginella moellendorffii]
Length = 1142
Score = 1233 bits (3189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/955 (62%), Positives = 735/955 (76%), Gaps = 36/955 (3%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQR 89
+K + ADA L A +E+S SG SF+Y++SV S E +P + +TAYL ++QR
Sbjct: 16 SKHSVRVAQTTADAKLHAVYEESGESGDSFDYTKSVNATKSTGESIPAQAVTAYLQRMQR 75
Query: 90 GGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS------EDFELNGLIGIDARTLF 143
GGL+QPFGCMLAVEE +FR+I +S+N EMLDL +S +L G IG DAR+LF
Sbjct: 76 GGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGAGQQDLLG-IGSDARSLF 134
Query: 144 TPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPA 203
TP S ++L KAA + ++S+LNPI VH + + KPFYAI+HRIDVG+V+DLEP K+ D +
Sbjct: 135 TPASASALEKAAGAIDVSMLNPISVHCKTSA--KPFYAIVHRIDVGLVLDLEPVKASDTS 192
Query: 204 L-SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHG 262
+ S AGA+QS KLA AISRLQ+LPGGDIGLLCDTVVE+V++LTGYDRVM Y FHDD+HG
Sbjct: 193 VGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHDDEHG 252
Query: 263 EVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPL 322
EVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC A PV + Q K+L+QP+
Sbjct: 253 EVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAAPVKISQDKDLRQPI 312
Query: 323 CLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------------MKL 363
L STLR+PHGCH QYM NMGS+ASLVMAVIIN D KL
Sbjct: 313 SLAGSTLRAPHGCHAQYMGNMGSVASLVMAVIINDNDDEYRSSSGGGGGGGAYQQKGRKL 372
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WG+VVCHHTSPR +PFPLR ACEFL+Q F LQL ME+++A QL EK+ILRTQ LLCDMLL
Sbjct: 373 WGMVVCHHTSPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLL 432
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IV+QSP+IMDLVKC+GAALYYG R WL+GVTP+E+Q+KDIA WLL +H D TGL
Sbjct: 433 RDAPIGIVSQSPNIMDLVKCNGAALYYGKRFWLLGVTPSEAQIKDIADWLLEHHKDSTGL 492
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG VCGMA A+IT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G
Sbjct: 493 STDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHDPDDKDDG 552
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SF ++ +++D+K + + N
Sbjct: 553 RKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFHDI-DDSDTKTMIHARLN 611
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELS+VA EMVRLIETATAPI VDSSG INGWNAKVAELTGLP +EAMG+SL
Sbjct: 612 DLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVTEAMGRSL 671
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
++V +ES VE L+ AL G+E++NVELKL+ F +QK V ++VNAC SRD +N
Sbjct: 672 AKDLVLQESADMVERLLYLALQGDEEQNVELKLKTFGVQKDKEAVILVVNACASRDVSDN 731
Query: 724 VKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEK 783
V GVCFVGQD+T +KV+MDKF R+QGDY+AI+Q+ NPLIPPIF +DE CSEWN AMEK
Sbjct: 732 VVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFGYCSEWNPAMEK 791
Query: 784 VTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNR 840
++GW R EV+GKML EIFG +CR+KGQD +TKFMI+L GQ TE FPF FF+R
Sbjct: 792 LSGWKREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQDTEKFPFAFFDR 851
Query: 841 QGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIR 900
QG++VE LTA++R DAEG + G FCF+ I +LQ AL Q + +K+KELAYIR
Sbjct: 852 QGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVALSKLKELAYIR 911
Query: 901 QEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
QE+KNPL GI F L+E++ +SE+Q+QY+ET CE+QI I+D MDL IE+G
Sbjct: 912 QEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDG 966
>gi|13429830|dbj|BAB39687.1| phytochrome [Marchantia paleacea subsp. diptera]
Length = 1126
Score = 1229 bits (3180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/944 (63%), Positives = 724/944 (76%), Gaps = 25/944 (2%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQR 89
+K I ADA L A FE+S SG SF+Y++S+ S E VP + +TAYL ++QR
Sbjct: 16 SKHSVRIVQTTADAKLQAVFEESGESGDSFDYTKSINASKSTGESVPAQAVTAYLQRMQR 75
Query: 90 GGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTP 145
GGL Q FGCMLAVEE TFR++ YSEN EMLDL ++ ++ G IG DARTLF
Sbjct: 76 GGLTQTFGCMLAVEELTFRVLAYSENAPEMLDLMPQAVPCVGQQDVLG-IGTDARTLFNS 134
Query: 146 PSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALS 205
S +L KAA + ++S+ NPI V S KPFYAI+HRID G+VID+EP + DP++S
Sbjct: 135 ASAVALEKAAGALDVSMFNPISVQCKSSG--KPFYAIVHRIDAGLVIDIEPVRPSDPSVS 192
Query: 206 LAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVV 265
AGA+QS KLA AISRLQ+LPGGDIGLLCDTVVE+V++LTGYDRVM Y FH+D+HGEVV
Sbjct: 193 AAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVV 252
Query: 266 SEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLV 325
+EIRRSDLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC A PV VIQ KEL+QPL L
Sbjct: 253 AEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCCAQPVQVIQDKELRQPLSLA 312
Query: 326 NSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-----------SMKLWGLVVCHHTSP 374
STLR+PHGCH QYM NMGSIASLVMAVIIN D KLWGLVVCHHT+P
Sbjct: 313 GSTLRAPHGCHAQYMGNMGSIASLVMAVIINVNDEEYSSRGYHHKGRKLWGLVVCHHTTP 372
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R +PFPLR ACEFL+Q F LQL ME+++A QL EK ILRTQ LLCDMLLRDAP IV+QS
Sbjct: 373 RSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKRILRTQTLLCDMLLRDAPIGIVSQS 432
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDLVKCDGAALYYG R W++G TPTE Q+KDIA WLL H D TGLSTDSLA+AGYP
Sbjct: 433 PNIMDLVKCDGAALYYGKRYWVLGTTPTELQIKDIADWLLEYHKDSTGLSTDSLADAGYP 492
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKH P+ KD+G KMHPRSSFKA
Sbjct: 493 GAASLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHDPDDKDDGRKMHPRSSFKA 552
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DELS
Sbjct: 553 FLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLQGMDELS 611
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+VA EMVRLIETATAPI VDSSG INGWNAKVAELTGLP SEAMG+SL+ ++ EES
Sbjct: 612 TVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVSEAMGRSLVKDLALEESVE 671
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
VE L+ AL GEE++NVE+KL+ + QK V ++VNAC+SRD NV GVCFVGQD+
Sbjct: 672 TVERLLYLALQGEEEQNVEIKLQTYGAQKDKGAVILIVNACSSRDVTENVVGVCFVGQDV 731
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKF R+QGDY+AI+Q+ NPLIPPIF SDE CSEWN AMEK+ GW R EVIG
Sbjct: 732 TGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGSDEFGYCSEWNPAMEKLAGWKREEVIG 791
Query: 795 KMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
KML EIFG CR+KGQD +TKFMI+L + GQ +E FPF FF+RQG+FVE LTA
Sbjct: 792 KMLVGEIFGTQMMCCRLKGQDAMTKFMIVLNSAMDGQDSEKFPFAFFDRQGKFVEALLTA 851
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++RTD+EG G FCF+QI +L AL Q + ++K+KELAYIRQE+KNPL GI
Sbjct: 852 NKRTDSEGAFTGVFCFLQIASMELLQALTVQRATEKVAFSKLKELAYIRQEIKNPLYGIM 911
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F L+E ++++E Q+Q++ETS CERQ+ I+D MDL IE+G
Sbjct: 912 FTRNLVEDTNLTEEQKQFIETSALCERQLRRILDDMDLESIEDG 955
>gi|6502525|gb|AAF14344.1|AF069305_1 phytochrome B [Pisum sativum]
Length = 1121
Score = 1228 bits (3178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/941 (63%), Positives = 732/941 (77%), Gaps = 27/941 (2%)
Query: 36 KTIIDHYNADAGLLAEFEQSVASGKSFNYSRS--VISPPEGVPEEQITAYLSKIQRGGLI 93
+ I Y DA L A FE+S G SF+Y++S V + E VPE+QITAYL+KIQRGG I
Sbjct: 17 RKAIAQYTEDAXLHAVFEKS---GDSFDYAQSIRVTAATESVPEQQITAYLAKIQRGGFI 73
Query: 94 QPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----ED---FELNGLIGIDARTLFTPP 146
QPFG M+AV+E +FR++ YSEN +ML + +S ED +G+D R+LF+
Sbjct: 74 QPFGSMIAVDETSFRVLAYSENARDMLGIAPQSVPSMEDDSSSSSFFSLGVDVRSLFSAS 133
Query: 147 SGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSL 206
S L KA ++REISL+NPI +HS RS KPFY ILHRID+G+VIDLEP++S DPALS+
Sbjct: 134 SSVLLEKAFSAREISLMNPIWIHS--RSTGKPFYGILHRIDIGVVIDLEPARSEDPALSI 191
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
AGAVQSQKLAV AIS+LQALPGGD+ LLCD VVE V++LTGYDRVM+Y FH+D+HGEVV+
Sbjct: 192 AGAVQSQKLAVRAISQLQALPGGDVKLLCDAVVESVRELTGYDRVMVYKFHEDEHGEVVA 251
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V Q + L QP+CLV
Sbjct: 252 ESKRVDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLVG 311
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINSKD------------SMKLWGLVVCHHTSP 374
STLR+PHGCH QYM NMGSIASL MAVIIN D SM+LWGLVVCHHTS
Sbjct: 312 STLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGGGIGGAARGSMRLWGLVVCHHTSA 371
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R IPFPLRYACEFL+QAF LQL MELQ+A+Q EK +L+TQ LLCDMLLRD+ IVTQS
Sbjct: 372 RCIPFPLRYACEFLMQAFGLQLNMELQLAVQSLEKRVLKTQTLLCDMLLRDSHTGIVTQS 431
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
PSIMDLVKCDGAALYY G +GVTPTESQ++DI WLL H D TGLSTDSLA+AGYP
Sbjct: 432 PSIMDLVKCDGAALYYQGNYHPLGVTPTESQIRDIIDWLLAFHSDSTGLSTDSLADAGYP 491
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GAA LG AVCGMA A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G KMHPRSSFKA
Sbjct: 492 GAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQKMHPRSSFKA 551
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEVVK RS W+ +E++AIHSLQ+++RDSF+E E NDSK +T ++QGVDELS
Sbjct: 552 FLEVVKIRSMQWDNAEMDAIHSLQLILRDSFKE-AENNDSKAVVHTHMAELELQGVDELS 610
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETATAPIF VD G INGWNAKV+ELTGL EAMGKSL+ ++V++ES+
Sbjct: 611 SVAREMVRLIETATAPIFAVDVDGRINGWNAKVSELTGLLVEEAMGKSLVHDLVYKESRE 670
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ L+ AL GEEDKNVE+K++ F Q+ V+I+VNAC+S+DY NN+ GVCFVGQDI
Sbjct: 671 TVDKLLSHALKGEEDKNVEIKMKTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQDI 730
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ S NPLIPPIFASD+N CC EWN AMEK++GW R +VIG
Sbjct: 731 TGQKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLSGWSRADVIG 790
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FG+FC++KG D +TKFMI+L+ + G T+ FP F +R G++V LTA++R
Sbjct: 791 KLLVGEVFGSFCQLKGSDAMTKFMIVLHNALGGHDTDKFPLSFLDRHGKYVHTFLTANKR 850
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G++IG FCF+QI+ P+LQ AL Q +D A++KELAYI QEVKNPL+GIRF +
Sbjct: 851 VNMDGQIIGAFCFLQIVNPELQQALTVQRQQDSSSLARMKELAYICQEVKNPLSGIRFTN 910
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
LLES+ +++ Q+Q LETS ACE+Q++ I+ + L IE+G
Sbjct: 911 SLLESTCLTDEQKQLLETSVACEKQMLKIVRDIALESIEDG 951
>gi|57791652|gb|AAW56594.1| phytochrome D [Arabidopsis thaliana]
gi|57791654|gb|AAW56595.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1223 bits (3165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 586/938 (62%), Positives = 729/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSRKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WLL NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+AFLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETAT PIF VD G INGWNAK+AELTGL +AMGKSL+ E++++E + V+
Sbjct: 658 REMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSV 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E + ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|255642598|gb|ACU21558.1| phytochrome B [Medicago sativa]
Length = 1061
Score = 1223 bits (3164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/900 (64%), Positives = 721/900 (80%), Gaps = 23/900 (2%)
Query: 76 PEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-------ED 128
PE+QITAYL+KIQRGG IQPFG M+AV+EP+FR++ Y+EN +ML + +S ++
Sbjct: 1 PEQQITAYLAKIQRGGFIQPFGSMIAVDEPSFRVLAYNENARDMLGITPQSVPSLEDDDE 60
Query: 129 FELNGL-IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
+G IG D R+LFT SG L KA ++REISL+NPI +HS RS KPFY ILHRID
Sbjct: 61 SSSSGFNIGTDVRSLFTHSSGVLLEKAFSAREISLMNPIWIHS--RSTGKPFYGILHRID 118
Query: 188 VGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTG 247
VG+VIDLEP++S DPALS+AGAVQSQKLAV AIS+LQ+LPGGD+ +LCD VVE V++LTG
Sbjct: 119 VGVVIDLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTG 178
Query: 248 YDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHA 307
YDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A
Sbjct: 179 YDRVMVYKFHEDEHGEVVAESKRIDLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCNA 238
Query: 308 IPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------- 359
PV V Q + L QP+CLV STLR+PHGCH QYM NMGSIASL MAVIIN D
Sbjct: 239 SPVRVFQDEALVQPVCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGG 298
Query: 360 ----SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQ 415
SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A Q +EK +LRTQ
Sbjct: 299 TGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSSEKRVLRTQ 358
Query: 416 VLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLN 475
LLCDMLLRD+P IVTQSPSIMDLVKCDGAAL+Y G + +GVTPTESQ++DI WLL
Sbjct: 359 TLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALFYQGNYYPLGVTPTESQIRDIIEWLLA 418
Query: 476 NHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKH 535
HGD TGLSTDSLA+AGYPGAA LG AVCGMA A IT KDFLFWFRSHTAKE+KWGGAKH
Sbjct: 419 FHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKH 478
Query: 536 HPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK 595
HPE KD+G +MHPRSSFKAFLEVVK+RS W+ +E++AIHSLQ+++RDSF+E E NDSK
Sbjct: 479 HPEDKDDGQRMHPRSSFKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKE-AENNDSK 537
Query: 596 VQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPA 655
+T ++QGVDELSSVA EMVRLIETATAPIF VD +G INGWNAKV+ELTGL
Sbjct: 538 AVVHTHMAELELQGVDELSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLV 597
Query: 656 SEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNAC 715
+AMGKSL+ ++V++ESQ V+ L+ AL GEEDKNVE+K+R F Q+ V+I+VNAC
Sbjct: 598 EDAMGKSLLHDLVYKESQETVDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNAC 657
Query: 716 TSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCS 775
+S+DY NN+ GVCFVGQD+T +KV+MDKFI +QGDY+AI+ S N LIPPIFASD+N CC
Sbjct: 658 SSKDYTNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCL 717
Query: 776 EWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPF 835
EWN AMEK++GW R +VIGK+L E+FG+FC++KG D +TKFMI+L+ + GQ T+ FPF
Sbjct: 718 EWNNAMEKLSGWSRTDVIGKLLVGEVFGSFCQLKGSDAMTKFMIVLHNALGGQDTDEFPF 777
Query: 836 GFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKE 895
F +R G++V+ LTA++R + +G++IG FCF+QI+ P+LQ AL Q +D +A++KE
Sbjct: 778 SFVDRHGKYVQTFLTANKRVNIDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKE 837
Query: 896 LAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
LAYI QEVKNPL+GIRF + LLES+ +++ Q+Q LETS ACE+Q++ II +DL I++G
Sbjct: 838 LAYICQEVKNPLSGIRFTNSLLESTCLTDEQKQLLETSAACEKQMLKIIRDIDLDSIDDG 897
>gi|57791668|gb|AAW56602.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1222 bits (3162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/938 (62%), Positives = 730/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WLL NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+AFLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLI+TAT PIF VD G INGWNAK+AELTGL +AMGKSL+ E++++E + V+
Sbjct: 658 REMVRLIKTATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSV 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E + ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|327242615|gb|AEA41043.1| phytochrome B [Amphicarpaea edgeworthii]
Length = 1105
Score = 1221 bits (3159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/932 (63%), Positives = 734/932 (78%), Gaps = 22/932 (2%)
Query: 41 HYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCML 100
Y DA L A FEQS SGKSF+YS+S+ E VPE+QITAYL KIQRGG IQPFG M+
Sbjct: 7 QYTEDARLHAVFEQSGESGKSFDYSQSIRITSETVPEQQITAYLLKIQRGGFIQPFGSMI 66
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGL-IGIDARTLFTPPSGASLAKA 154
AV+E +FRI+ YS+N +ML + +S +D +L+ +G D RTLFT SG L KA
Sbjct: 67 AVDERSFRIMAYSDNARDMLGIIPQSVPSMDDDDKLHAFGLGTDVRTLFTHSSGVLLEKA 126
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
++REISL+NPI +HS R +PFY I HR+DVGIVIDLEP+++ DPALS+AGAVQSQK
Sbjct: 127 FSAREISLMNPIWIHS--RISGRPFYGIFHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 184
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AIS+LQ+LPGG++ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E +R DLE
Sbjct: 185 LAVRAISKLQSLPGGNVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLE 244
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA V V+Q + L QPLCLV STLR+PHG
Sbjct: 245 PYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASSVRVMQDEALLQPLCLVGSTLRAPHG 304
Query: 335 CHLQYMTNMGSIASLVMAVIIN--------SKDSMKLWGLVVCHHTSPRYIPFPLRYACE 386
CH QYM NMGSIASLVMAVIIN S+ SM+LWGLVVCHHTS R IPFPLRYACE
Sbjct: 305 CHAQYMANMGSIASLVMAVIINGNDEDGIGSRSSMRLWGLVVCHHTSARCIPFPLRYACE 364
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+QAF LQL MELQ+A+Q EK +LRTQ LLCDMLLRD+P IVTQSPSIM+LVKCDGA
Sbjct: 365 FLMQAFGLQLNMELQLAVQSMEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMNLVKCDGA 424
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYY G +GVTPTE+Q++DI WLL HGD TGLSTDSLA+AGYPGAALLG AVCGM
Sbjct: 425 ALYYRGNYCPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGM 484
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A IT KDFLFWFRSHT KE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PW
Sbjct: 485 AVAYITEKDFLFWFRSHTGKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSMPW 544
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
E +E++AIHSLQ+++RDSF++ E DSKV +++GVDELSSVA EMVRLIET
Sbjct: 545 ENAEMDAIHSLQLILRDSFKD-AEHRDSKVVVPCVPK-LELRGVDELSSVAREMVRLIET 602
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
ATAPIF VD G INGWNAKV+ELTGL EAMGKSLI ++V +ES+ V+ L+ RAL G
Sbjct: 603 ATAPIFAVDVDGHINGWNAKVSELTGLAVEEAMGKSLIRDLVFKESEETVDRLLSRALKG 662
Query: 687 EEDKNVEL----KLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMD 742
+ +LR F + Q+ V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MD
Sbjct: 663 ILSNTLAFWSIHRLRTFGPEHQNKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKIVMD 722
Query: 743 KFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF 802
KFI +QGDY+AI+ S NPLIPPIFASD+N CC EWN AMEK+TGW R +VIGKML RE+F
Sbjct: 723 KFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRSDVIGKMLVREVF 782
Query: 803 GNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVI 862
G+ C++KG D +TKFMI+L+ + GQ T+ FPF F +R G++++ LTA++R + G++I
Sbjct: 783 GSCCQLKGSDSMTKFMIVLHNALGGQETDKFPFSFLDRHGKYIQTFLTANKRINMNGQII 842
Query: 863 GCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSI 922
G FCF+QI+ P+LQ AL+AQ ++ + +A++KELAYI Q +KNPL+GIRF + LLE + +
Sbjct: 843 GAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGIKNPLSGIRFTNSLLEDTGL 902
Query: 923 SENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
++ Q+Q+LETS ACE+Q+ II +DL IE+
Sbjct: 903 TDEQKQFLETSSACEKQMSEIIHDIDLESIED 934
>gi|57791670|gb|AAW56603.1| phytochrome D [Arabidopsis thaliana]
gi|57791672|gb|AAW56604.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1220 bits (3157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/938 (62%), Positives = 730/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++A+EE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAIEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEV++E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVLAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WLL NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+AFLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLI+TAT PIF VD G INGWNAK+AELTGL +AMGKSL+ E++++E + V+
Sbjct: 658 REMVRLIKTATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSV 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E + ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|33333478|gb|AAQ11872.1| phytochrome B [Stellaria longipes]
Length = 1128
Score = 1220 bits (3156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 586/942 (62%), Positives = 731/942 (77%), Gaps = 21/942 (2%)
Query: 31 PVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQ 88
P + I Y DA L A FEQS SGKSF+YS+SV + E VPE+QITAYLSKIQ
Sbjct: 19 PSDTMSRAIAQYTIDARLHAVFEQSGESGKSFDYSQSVKTYTSAESVPEQQITAYLSKIQ 78
Query: 89 RGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL---------IGIDA 139
RGGLIQPFGCMLA+++ T+RII YS+N +E+L + + + L +G D
Sbjct: 79 RGGLIQPFGCMLAIDDLTYRIIAYSQNSVELLGFITTTTTTAVPSLEAVQQRIIAVGTDI 138
Query: 140 RTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKS 199
R+LF S L KA ++REI+LLNP+ +HS + KPFYAILHRIDVGIVIDLEP+++
Sbjct: 139 RSLFMSSSCVLLEKAFSAREITLLNPVWIHSKANG--KPFYAILHRIDVGIVIDLEPART 196
Query: 200 GDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDD 259
DPALS+AGAVQSQKLAV AIS+LQ+LPGGD+ LLCDTVVE V++L YDRVM+Y FH+D
Sbjct: 197 EDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRQLAAYDRVMVYKFHED 256
Query: 260 DHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELK 319
+HGEVV+E +R+DLEPYLG+H+PA DIPQA+RFLFKQNRVRMI DCHA V V+Q + L+
Sbjct: 257 EHGEVVAESKRADLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHADSVSVVQDERLR 316
Query: 320 QPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------SMKLWGLVVCHHT 372
QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D +M+LWGLVVCHHT
Sbjct: 317 QPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIINGNDDEGSTRNAMRLWGLVVCHHT 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
SPR IPFPLRYACEFL+QAF LQL MELQ++ Q+ EK +LRTQ LLCDM+LR++P IVT
Sbjct: 377 SPRSIPFPLRYACEFLMQAFGLQLNMELQLSAQVLEKRVLRTQTLLCDMILRESPTGIVT 436
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
QSPSIMDLVKCDGAAL + G+ + +GVTPTE QLKDI WLL+NHGD TGLSTDSLA+AG
Sbjct: 437 QSPSIMDLVKCDGAALLFCGKYYPLGVTPTELQLKDIVQWLLSNHGDSTGLSTDSLADAG 496
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGA L AVCGMA A IT DFLFWFRSH AKE+KWGGAKHHPE KD+ +M+PRSSF
Sbjct: 497 YPGALALADAVCGMAVAFITRSDFLFWFRSHPAKEIKWGGAKHHPEDKDDVQRMNPRSSF 556
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ EE SK + Q MQG+DE
Sbjct: 557 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKD-EETTHSKAIVHDQAGDVAMQGIDE 615
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
LSSVA EMVRLIETA APIF VD+ G INGWNAK +EL GL EAMGKSL+ ++V E+S
Sbjct: 616 LSSVAKEMVRLIETAMAPIFAVDADGCINGWNAKASELIGLSVEEAMGKSLVHDLVCEDS 675
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQ 732
+ + L+ AL G+EDKNVE+KL+ F Q+ VY++VNAC S+DY N + GVCFVG
Sbjct: 676 KNVTQELLLHALQGDEDKNVEIKLKAFGSQQHKKAVYVVVNACCSKDYTNKIVGVCFVGH 735
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
D+T +K +MDKF+ +QGDY+AI+ S +PLIPPIFASDEN+CC+EWN AME +TG+ + +V
Sbjct: 736 DVTGQKNVMDKFVNIQGDYKAIVHSPSPLIPPIFASDENSCCTEWNTAMEILTGYGKEDV 795
Query: 793 IGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
IGK L EIFG+ CR+KG D LTKFM++L+ I GQ ++ FPF F+NR G++V+ LTA+
Sbjct: 796 IGKTLVGEIFGSICRLKGHDSLTKFMVVLHNAIGGQDSDKFPFSFYNRGGRYVQGLLTAN 855
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+RT+ +G + G FCF+QI DLQ ALE Q ++ + ++KELAY+ QE+KNPLNGIRF
Sbjct: 856 KRTNIDGHITGAFCFLQIASSDLQQALEIQRQQENVCFERMKELAYLCQEIKNPLNGIRF 915
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
+ LLE++S+ E+Q+Q++ETS+ACE+QI I+ + L ++E
Sbjct: 916 ANSLLEATSLGEDQKQFIETSNACEKQIKKILGDIHLESVDE 957
>gi|57791650|gb|AAW56593.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1219 bits (3153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/938 (62%), Positives = 727/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WLL NH D TGLSTDSL + GYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDGGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+ FLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETAT PIF VD G INGWNAK+AELTGL +AMGKSL+ E++++E + V+
Sbjct: 658 REMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPI A+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPILAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSV 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E + ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|57791674|gb|AAW56605.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1218 bits (3152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/938 (62%), Positives = 728/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DV I+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVEILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVT PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTXRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WLL NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+AFLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETAT PIF VD G INGWNAK+AELTGL +AMGKSL+ E++++E + V+
Sbjct: 658 REMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSV 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E + ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|57791648|gb|AAW56592.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1218 bits (3151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/938 (62%), Positives = 727/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WLL NH D TGLSTDSL + GYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDGGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PR SF+ FLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRCSFQTFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETAT PIF VD G INGWNAK+AELTGL +AMGKSL+ E++++E + V+
Sbjct: 658 REMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSV 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E + ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|422898335|dbj|BAM67033.1| phytochrome b [Chrysanthemum seticuspe f. boreale]
Length = 1130
Score = 1218 bits (3151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/943 (62%), Positives = 736/943 (78%), Gaps = 18/943 (1%)
Query: 27 AKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP---EGVPEEQITAY 83
A VN I Y DA L A +EQS SGKSF+YS+S+ + + + E+Q+TAY
Sbjct: 27 ASTSVVNSMSKAIAQYAVDARLHAVYEQSGGSGKSFDYSQSIKTSATNDDSIAEQQMTAY 86
Query: 84 LSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDA 139
LSKIQRGG IQPFGCM+A++ TF++I +SEN E L L +S E E+ IG D
Sbjct: 87 LSKIQRGGHIQPFGCMIAIDNVTFKVIAFSENARERLGLAPQSVPSLEKPEIL-TIGTDV 145
Query: 140 RTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKS 199
+TLF S L A +REI+L NP LV S + KPFYAILHRIDVGIVIDLEP ++
Sbjct: 146 KTLFMNSSVLKLEHAFRAREITLSNPHLVQSKNSG--KPFYAILHRIDVGIVIDLEPVRT 203
Query: 200 GDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDD 259
DP +S AG+VQSQKLAV AIS++QALPGGDI LLCDTVV++V++LTGYDRVM+Y FH+D
Sbjct: 204 EDPGISGAGSVQSQKLAVRAISKVQALPGGDIKLLCDTVVQNVRELTGYDRVMVYKFHED 263
Query: 260 DHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELK 319
+HGEVV+E +R+DL+PY+G+H+PA DIPQA+RFLF+QNRVRMI DC+A PV V+Q L
Sbjct: 264 EHGEVVAESKRADLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCYANPVRVVQDDALM 323
Query: 320 QPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------SMKLWGLVVCHHT 372
QPLCLV STLR+PHGCH QYM NMGS ASL +AVIIN + +M LWGLVVCHHT
Sbjct: 324 QPLCLVGSTLRAPHGCHAQYMANMGSRASLALAVIINGNEDGAGGRGTMGLWGLVVCHHT 383
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
S R IPFPLR+ACEFL+QAF LQL +ELQ+A Q++EK ILRTQ LLCDMLLRD+P IVT
Sbjct: 384 SARCIPFPLRHACEFLMQAFGLQLNLELQLASQMSEKRILRTQTLLCDMLLRDSPTGIVT 443
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
QSPSIMDLVKCDGAALYY G+ + +G+TPTESQ+KDI WLL H D TGLSTDSLA+AG
Sbjct: 444 QSPSIMDLVKCDGAALYYQGKYYPIGITPTESQIKDIVDWLLACHTDSTGLSTDSLADAG 503
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGAA LG AVCGMA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSF
Sbjct: 504 YPGAATLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 563
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
AFLEVVK+RS PWE SE++AIHSLQ+++RDSF++ +E N SK Q + +QG+DE
Sbjct: 564 NAFLEVVKSRSLPWENSEMDAIHSLQLILRDSFKDSDESN-SKAVIKVQIDEMGLQGMDE 622
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
LSSVA EMVRLIETATAPIF VD G INGWNAK+AELTGL +EAMGKSL+ +++++ES
Sbjct: 623 LSSVAREMVRLIETATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVQDLIYKES 682
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQ 732
+ V L+ A+ GEEDKNVE+KL+ F L ++ V+++VNAC+S+DY +N+ GVCFVGQ
Sbjct: 683 EETVVKLLQNAIQGEEDKNVEIKLKTFNLAQEDDAVFVVVNACSSKDYTDNIVGVCFVGQ 742
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
D+T +KV+MDKF+++QGDY+AII S N LIPPIFASDEN CCSEWN AMEK+TGW R +V
Sbjct: 743 DVTRQKVVMDKFVQIQGDYKAIIHSPNALIPPIFASDENTCCSEWNTAMEKLTGWGREDV 802
Query: 793 IGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
IGKML EIFG+ CR+KG D LTKFMI+L+ I GQ T+ +PF FF+R+G++V+ LTA+
Sbjct: 803 IGKMLVGEIFGSCCRLKGPDSLTKFMIILHNAIGGQDTDKYPFSFFDRRGKYVQALLTAN 862
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+R + G+V G FCF+QI P+LQ A + Q ++ + ++KELAYI E+KNPL+GIRF
Sbjct: 863 KRVNLGGEVTGAFCFVQIASPELQQAFKIQRQQENKCFERMKELAYICHEIKNPLSGIRF 922
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+ LLE++ ++E+Q+Q LETS AC++Q++ II +D+ I+EG
Sbjct: 923 ANSLLEATDLTEDQKQLLETSAACQKQMLKIIKDVDMENIQEG 965
>gi|57791664|gb|AAW56600.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1218 bits (3151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/938 (62%), Positives = 727/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WLL NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+AFLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLI TAT PIF VD G INGWNAK+AELTGL +A GKSL+ E++ +E + V+
Sbjct: 658 REMVRLIXTATVPIFAVDIDGCINGWNAKIAELTGLSVEDAXGKSLVRELISKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSV 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E + ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|57791666|gb|AAW56601.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1217 bits (3150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/938 (62%), Positives = 728/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WLL NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+AFLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETAT PIF VD G INGWNAK+AELTGL +A+GKSL+ E++ +E + V+
Sbjct: 658 REMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDALGKSLVRELISKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLI PIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLILPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSV 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E + ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|5757903|gb|AAD50631.1|AF122901_1 phytochrome B2 [Solanum lycopersicum]
Length = 1121
Score = 1217 bits (3148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/928 (63%), Positives = 724/928 (78%), Gaps = 17/928 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS SGK+F+YS+SV + E V E QITAYL+K+QRGG IQPFGC
Sbjct: 36 VAQYTTDARLHAAFEQSGESGKNFDYSQSVRNSTESVTEHQITAYLNKMQRGGHIQPFGC 95
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL--IGIDARTLFTPPSGASLAKAA 155
+AVEE +F +I YSEN EMLD+ +S E N + IG D RTLF+ S L A
Sbjct: 96 TIAVEEASFCVIAYSENACEMLDIMPQSVPSLEKNEILKIGTDVRTLFSSSSSGLLEGAF 155
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
+REI+LLNPI VHS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKL
Sbjct: 156 GAREITLLNPIWVHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKL 213
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
AV AIS LQ+LPGGDI LLCDTVV+ V++LTGYDRVM+Y FHDD+HGEVV+E RRSDLEP
Sbjct: 214 AVRAISLLQSLPGGDIDLLCDTVVKSVRELTGYDRVMVYKFHDDEHGEVVAESRRSDLEP 273
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
Y+G+H+PA DIPQA+RFLFKQNRVRMI DC AIPV VIQ + L QPLCLV STLR+PHGC
Sbjct: 274 YIGLHYPATDIPQASRFLFKQNRVRMIVDCTAIPVRVIQDESLMQPLCLVGSTLRAPHGC 333
Query: 336 HLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEF 387
H QYM NMG++ASL +AV+IN D +M+LWGLVV HH+S R+IPFPLRYACEF
Sbjct: 334 HPQYMVNMGNVASLTLAVVINGNDDEVVGGRNAMRLWGLVVGHHSSARFIPFPLRYACEF 393
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL MELQ+A QLAEK +LRTQ +LCDMLLRD+P IVTQ+PSI+DLVKCDGAA
Sbjct: 394 LMQAFGLQLNMELQLASQLAEKRVLRTQTVLCDMLLRDSPTGIVTQNPSIVDLVKCDGAA 453
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY GR + +G+TPT +Q+K I WLL H D TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 454 LYYQGRYYPLGITPTAAQIKGIVEWLLTCHVDSTGLSTDSLADAGYPEAASLGAAVCGMA 513
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
A +TSK FLFWFRSHTA E+KWGGAKHHPE KD+ KMHPRSSFKAFLEVVKNRS PWE
Sbjct: 514 VAYVTSKYFLFWFRSHTASEIKWGGAKHHPEDKDDWQKMHPRSSFKAFLEVVKNRSLPWE 573
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
+E++AIHSLQ+++RDSF++ ++SK Q +QG+DEL SVA EMVRL+ETA
Sbjct: 574 NAEMDAIHSLQLILRDSFKDA---SNSKSIVRVQLREEGLQGMDELRSVAREMVRLVETA 630
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
TAPIF VD G IN WNAKVAELT L EA+GKSL+ ++VHEESQ +NL+ +AL GE
Sbjct: 631 TAPIFAVDVEGRINAWNAKVAELTELSVEEAIGKSLVHDLVHEESQTTAQNLLRKALRGE 690
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
EDKN+E+KLR F ++ V++ VNAC+++DY NN+ GV F+GQDIT +KV++DKF+R+
Sbjct: 691 EDKNIEIKLRTFGAEQLKKTVFVEVNACSNKDYTNNIVGVSFIGQDITAQKVVLDKFVRI 750
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCR 807
QGDY+AI+ S NPLIPPIF SDEN CC EWN AMEK++GW + E+IGKML EIFG FCR
Sbjct: 751 QGDYKAIMHSPNPLIPPIFVSDENTCCFEWNTAMEKLSGWNKEEIIGKMLVGEIFGTFCR 810
Query: 808 MKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCF 867
+KG D +T FMI+L++ I GQ + FPF F +R G+FV+ LTA++R + +G++IG FCF
Sbjct: 811 LKGPDDMTNFMIMLHKAIGGQEIDKFPFSFSDRNGKFVQALLTANKRVNVDGQIIGAFCF 870
Query: 868 MQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQR 927
+QI P+LQ L Q ++ +KELAYI +E+KNPLNGIRF + LLE++ ++ENQ+
Sbjct: 871 LQIASPELQKTL-MQRQQEKTSNIHMKELAYICRELKNPLNGIRFTNSLLEATELTENQK 929
Query: 928 QYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+LETS ACERQ+ II +DL IE+G
Sbjct: 930 QFLETSAACERQMSKIIRDIDLDNIEDG 957
>gi|15234859|ref|NP_193360.1| phytochrome D [Arabidopsis thaliana]
gi|12644264|sp|P42497.2|PHYD_ARATH RecName: Full=Phytochrome D
gi|2244983|emb|CAB10404.1| phytochrome D [Arabidopsis thaliana]
gi|7268374|emb|CAB78667.1| phytochrome D [Arabidopsis thaliana]
gi|332658321|gb|AEE83721.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1217 bits (3148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/938 (62%), Positives = 728/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WL+ NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+ FLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETAT PIF VD G INGWNAK+AELTGL +AMGKSL+ E++++E + V+
Sbjct: 658 REMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSI 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|57791662|gb|AAW56599.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1216 bits (3146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/938 (62%), Positives = 728/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNM SIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMCSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +G+TPT+SQ+ DI WLL NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYSLGMTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+AFLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVXQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETAT PIF VD G INGWNAK+AELTGL +AMGKSL+ E++++E + V+
Sbjct: 658 REMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ F F FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFSFPFFDRKGEFIQALLTLNKRVSV 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E + ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|57791656|gb|AAW56596.1| phytochrome D [Arabidopsis thaliana]
gi|57791658|gb|AAW56597.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1215 bits (3144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/938 (62%), Positives = 728/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y F +D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFREDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A V V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASAVRVVQDDRLTQSICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WLL NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+AFLEVVK
Sbjct: 538 DAVCGMAIACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETAT PIF VD G INGWNAK+AELTGL +A+GKSL+ E++++E + V+
Sbjct: 658 REMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAIGKSLVRELIYKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSV 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E + ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|452814|emb|CAA54072.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1215 bits (3143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/938 (62%), Positives = 727/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEF +QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFFMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WL+ NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+ FLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETAT PIF VD G INGWNAK+AELTGL +AMGKSL+ E++++E + V+
Sbjct: 658 REMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSI 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|297800528|ref|XP_002868148.1| phytochrome D [Arabidopsis lyrata subsp. lyrata]
gi|297313984|gb|EFH44407.1| phytochrome D [Arabidopsis lyrata subsp. lyrata]
Length = 1165
Score = 1214 bits (3142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/982 (59%), Positives = 739/982 (75%), Gaps = 30/982 (3%)
Query: 2 GLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKG------KTIIDHYNADAGLLAEFEQS 55
G + NR S ++ +P N G I Y DA L A FEQS
Sbjct: 18 GHRVNRSRHTSAEQAQSSASKAQRSQNQQPQNHGAGTESTSKAIQQYTVDARLHAVFEQS 77
Query: 56 VASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYS 113
SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPFGC++AVEE TF IIGYS
Sbjct: 78 GESGKSFDYSQSLKTAPYDPSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYS 137
Query: 114 ENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVH 169
EN EML L S+S ++ IG D R+LF S L +A +REI+LLNPI +H
Sbjct: 138 ENAREMLGLMSQSVPSIKEISEVLTIGTDLRSLFKSSSIVLLERAFVAREITLLNPIWIH 197
Query: 170 SNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGG 229
S ++ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGG
Sbjct: 198 S--KNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGG 255
Query: 230 DIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQA 289
DI LLCDTVV+ V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA
Sbjct: 256 DIKLLCDTVVDSVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQA 315
Query: 290 ARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASL 349
+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+PHGCH QYMTNMGSIASL
Sbjct: 316 SRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASL 375
Query: 350 VMAVIINS-------------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQL 396
MAVIIN ++SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL
Sbjct: 376 AMAVIINGNEEDGNGGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQL 435
Query: 397 YMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWL 456
MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDLVKC+GAA Y G+ +
Sbjct: 436 NMELQLALQVSEKRVLRMQTLLCDMLLRDSPTGIVTQRPSIMDLVKCNGAAFLYQGKYYS 495
Query: 457 VGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDF 516
+GV PTE+Q+ DI WLL NH D TGLSTDSL +AGYP AA LG AVCGMA A IT +DF
Sbjct: 496 LGVAPTEAQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDF 555
Query: 517 LFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHS 576
LFWFRSHT KE+KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK++ PWE +E++AIHS
Sbjct: 556 LFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSQCQPWETAEMDAIHS 615
Query: 577 LQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFG 633
LQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA EM+RLIETAT PIF
Sbjct: 616 LQLILRDSFKESEAMDSKASAPGGVQPHGDDMAEQGMQEIGAVAREMIRLIETATVPIFA 675
Query: 634 VDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVE 693
VD G INGWNAK+AELTGL EAMGKSL+ +++++E + + L+ AL G+E KNVE
Sbjct: 676 VDIDGCINGWNAKIAELTGLSVEEAMGKSLVRDLIYKEYKETADRLLSCALKGDEGKNVE 735
Query: 694 LKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEA 753
+KL+ F + Q V+++VNAC+S+DY NN+ GVCFVGQD+T K +MDKFI +QGDY+A
Sbjct: 736 VKLKTFGPELQGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTGHKFVMDKFINIQGDYKA 795
Query: 754 IIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDM 813
II S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L RE+FG+ CR+KG D
Sbjct: 796 IIHSPNPLIPPIFAADENTCCIEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDA 855
Query: 814 LTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVP 873
LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R +GK+IG FCF+QI P
Sbjct: 856 LTKFMIVLHNAIGGQETDKFPFPFFDREGKFIQALLTLNKRVSVDGKIIGAFCFLQIPSP 915
Query: 874 DLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETS 933
+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LLE+++++E+Q+Q LETS
Sbjct: 916 ELQQALEVQRRQESEYFSRRKELAYIFQFIKNPLSGLRFTNSLLEATNLNEDQKQLLETS 975
Query: 934 DACERQIMTIIDGMDLRCIEEG 955
+CE+QI I+ MD++ IE+G
Sbjct: 976 VSCEKQISKIVGEMDVKSIEDG 997
>gi|57791660|gb|AAW56598.1| phytochrome D [Arabidopsis thaliana]
Length = 1126
Score = 1212 bits (3136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/938 (62%), Positives = 727/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y F +D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFREDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A V V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASAVRVVQDDRLTQSICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WLL NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+AFLEVVK
Sbjct: 538 DAVCGMAIACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETAT PIF VD G INGWNAK+AELTGL +A+GKSL+ E++++E + V+
Sbjct: 658 REMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAIGKSLVRELIYKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNV +KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSXALKGDEGKNVXVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSV 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E + ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>gi|168042146|ref|XP_001773550.1| phytochrome 4 [Physcomitrella patens subsp. patens]
gi|139001628|dbj|BAF51710.1| phytochrome4 [Physcomitrella patens]
gi|162675089|gb|EDQ61588.1| phytochrome 4 [Physcomitrella patens subsp. patens]
Length = 1126
Score = 1208 bits (3126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 586/944 (62%), Positives = 725/944 (76%), Gaps = 25/944 (2%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQR 89
+K + ADA L A +E+S SG SF+YS+SV S E VP +TAYL ++QR
Sbjct: 16 SKHSVRVAQTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGENVPALAVTAYLQRMQR 75
Query: 90 GGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTP 145
GGL+Q FGCML V+E +FR+I YSEN EMLDL ++ E+ G IG DARTLFTP
Sbjct: 76 GGLVQTFGCMLCVDESSFRVIAYSENAPEMLDLMPQAVPSVGQQEVLG-IGTDARTLFTP 134
Query: 146 PSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALS 205
S A+L K A + ++++LNPI VH RS KPFYAILHRIDVG+VID EP + D +S
Sbjct: 135 SSAAALEKCAGAVDVTMLNPISVHC--RSSGKPFYAILHRIDVGLVIDFEPVRPNDAVVS 192
Query: 206 LAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVV 265
AGA+QS KLA AISRLQALPGGDIGLLCDTVVE+V++L+GYDRVM Y FH+D+HGEV+
Sbjct: 193 SAGALQSHKLAAKAISRLQALPGGDIGLLCDTVVEEVRQLSGYDRVMAYKFHEDEHGEVL 252
Query: 266 SEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLV 325
+EIRRSDLEPYLG+H+PA DIPQA+RFLF +NRVRMI DC+A PV V+Q K+L+QP+ L
Sbjct: 253 AEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCYAPPVKVVQDKDLRQPISLA 312
Query: 326 NSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-----------SMKLWGLVVCHHTSP 374
STLR+PHGCH QYM NM SIASLVMAVI+N D KLWGLVVCHHTSP
Sbjct: 313 GSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNSRGGQQRGRKLWGLVVCHHTSP 372
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R + FPLR ACEFL+Q F LQL ME+++A QL EK+ILRTQ LLCDMLLRDAP IV+QS
Sbjct: 373 RTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQS 432
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDLVKCDGAALYYG R WL+G+TP E Q+K+IA WLL +H D TGLSTDSLA+AGYP
Sbjct: 433 PNIMDLVKCDGAALYYGKRFWLLGITPNEVQIKEIADWLLEHHQDSTGLSTDSLADAGYP 492
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GAA LG AVCGMA A+IT +DFLFWFRSHTAKE+KWGGAKH P+ KD+G KMHPRSSFKA
Sbjct: 493 GAAQLGDAVCGMAAAKITPRDFLFWFRSHTAKEIKWGGAKHDPDEKDDGRKMHPRSSFKA 552
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DELS
Sbjct: 553 FLEVVKRRSLPWEDIEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLQGMDELS 611
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+VA EMVRLIETATAPI VDSSG INGWNAKVAELTGLP EAMG+SL+ +++ EES
Sbjct: 612 TVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVGEAMGRSLVKDLILEESID 671
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ L+ AL GEE++N+E++L+ F QK+ V ++VNAC+SRD ++NV GVCFVGQD+
Sbjct: 672 VVQRLLYLALQGEEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDVQDNVVGVCFVGQDV 731
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K ++DKF R+QGDY+AI+Q+ NPLIPPIF +DE CSEWN +MEK+TGW R EV+G
Sbjct: 732 TGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPSMEKLTGWKREEVLG 791
Query: 795 KMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L EIFG CR+KGQD +TKFMI L + GQ T+ FPF FF+RQG++V+ LT
Sbjct: 792 KLLVGEIFGMQLMCCRLKGQDAMTKFMIALNSAMDGQDTDRFPFSFFDRQGKYVDALLTV 851
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++RTDAEG + G FCF+ +L AL Q + +AK+KELAYIRQE+KNPL GI
Sbjct: 852 NKRTDAEGSITGVFCFLHTTSVELLQALTVQRATEKVAFAKLKELAYIRQEIKNPLYGIM 911
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F L+E + +SE+QRQ++ETS CERQ+ ++D MDL IE+G
Sbjct: 912 FTRNLMEDTDLSEDQRQFVETSAVCERQLRKVLDDMDLESIEDG 955
>gi|57791676|gb|AAW56606.1| phytochrome D [Arabidopsis halleri]
Length = 1165
Score = 1206 bits (3120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 586/981 (59%), Positives = 735/981 (74%), Gaps = 29/981 (2%)
Query: 2 GLQGNRETTNSIGGGHNTTPFKSSDAKMKPVNKG------KTIIDHYNADAGLLAEFEQS 55
G + NR S ++ +P N G I Y DA L A FEQS
Sbjct: 18 GHRVNRSRHTSAEQAQSSASKAQRSQNQQPQNHGAGTESTSKAIQQYTVDARLHAVFEQS 77
Query: 56 VASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYS 113
SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPFGC++AVEE TF IIGYS
Sbjct: 78 GESGKSFDYSQSLKTAPYDPSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYS 137
Query: 114 ENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVH 169
EN EML L S+S E+ IG D R+LF S L +A +REI+LLNPI +H
Sbjct: 138 ENAREMLGLMSQSVPSIEEISEVLTIGTDLRSLFKSSSIVLLERAFVAREITLLNPIWIH 197
Query: 170 SNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGG 229
S ++ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGG
Sbjct: 198 S--KNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGG 255
Query: 230 DIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQA 289
DI LLCDTVV+ V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA
Sbjct: 256 DIKLLCDTVVDSVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQA 315
Query: 290 ARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASL 349
+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+PHGCH QYMTNMGSIASL
Sbjct: 316 SRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASL 375
Query: 350 VMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLY 397
MA+IIN ++SM+LWGLVVCHHTS R IPFPLR ACEFL+QAF LQL
Sbjct: 376 AMAIIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRCACEFLMQAFGLQLN 435
Query: 398 MELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLV 457
MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDLVKC+GAA Y G+ + +
Sbjct: 436 MELQLALQVSEKRVLRMQTLLCDMLLRDSPTGIVTQRPSIMDLVKCNGAAFLYQGKYYSL 495
Query: 458 GVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFL 517
GV PTE+Q+ DI WLL NH D TGLSTDSL +AGYP AA LG AVCGMA A IT +DFL
Sbjct: 496 GVAPTEAQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFL 555
Query: 518 FWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSL 577
FWFRSHT KE+KWGGAKHHPE KD+G +M PR+SF+AFLEVVK+R PWE +E++AIHSL
Sbjct: 556 FWFRSHTEKEIKWGGAKHHPEDKDDGQRMXPRASFQAFLEVVKSRCQPWETAEMDAIHSL 615
Query: 578 QIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGV 634
Q+++RDSF+E E ++ + G Q +G M QG+ E+ +VA EM+RLIETAT PIF V
Sbjct: 616 QLILRDSFKESEAMDSKASAPGGVQPHGDDMAEQGLQEIGTVAREMIRLIETATVPIFAV 675
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVEL 694
D G INGWNAK+AELTGL EAMGKSL+ +++++E + + L+ AL G+E KNVE+
Sbjct: 676 DIDGCINGWNAKIAELTGLSVEEAMGKSLVRDLIYKEYEETADRLLSCALKGDEGKNVEV 735
Query: 695 KLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAI 754
KL+ F + Q V+++VNAC+S+DY NN+ GVCFVGQD+T K++MDKFI +QGDY+AI
Sbjct: 736 KLKTFAPELQGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAI 795
Query: 755 IQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDML 814
I S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L RE+FG+ CR+KG D L
Sbjct: 796 IHSPNPLIPPIFAADENTCCIEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDAL 855
Query: 815 TKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPD 874
TKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R +GK+IG FCF+QI P+
Sbjct: 856 TKFMIVLHNAIGGQETDKFPFPFFDREGKFIQALLTLNKRVSVDGKIIGAFCFLQIPSPE 915
Query: 875 LQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSD 934
LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS
Sbjct: 916 LQQALEVQRRQESEYFSRRKELAYIFQFIKNPLSGLRFTNSLLEATDLNEDQKQLLETSV 975
Query: 935 ACERQIMTIIDGMDLRCIEEG 955
+CE+QI I+ MD+ I +G
Sbjct: 976 SCEKQISKIVGEMDVISIGDG 996
>gi|25986843|gb|AAM94952.1| phytochrome [Physcomitrella patens]
Length = 1126
Score = 1201 bits (3108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/944 (61%), Positives = 722/944 (76%), Gaps = 25/944 (2%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQR 89
+K + ADA L A +E+S SG SF+YS+SV S E VP +TAYL ++QR
Sbjct: 16 SKHSVRVAQTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGENVPALAVTAYLQRMQR 75
Query: 90 GGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTP 145
GGL+Q FGCML V+E +FR+I YSEN EMLDL ++ E+ G IG DARTLFTP
Sbjct: 76 GGLVQTFGCMLCVDESSFRVIAYSENAPEMLDLMPQAVPSVGQQEVLG-IGTDARTLFTP 134
Query: 146 PSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALS 205
S A+L K A + ++++LNPI VH RS KPFYAILHRIDVG+VID EP + D +S
Sbjct: 135 SSAAALEKCAGAVDVTMLNPISVHC--RSSGKPFYAILHRIDVGLVIDFEPVRPNDAVVS 192
Query: 206 LAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVV 265
AGA+QS KLA AISRLQALPGGDIGLLCDTVVE+V++L+GYDRVM Y FH+D+HGEV+
Sbjct: 193 SAGALQSHKLAAKAISRLQALPGGDIGLLCDTVVEEVRQLSGYDRVMAYKFHEDEHGEVL 252
Query: 266 SEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLV 325
+EIRRSDLEPYLG+H+PA DIPQA+RFLF +NRVRMI DC+A PV V+Q K+L+QP+ L
Sbjct: 253 AEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCYAPPVKVVQDKDLRQPISLA 312
Query: 326 NSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-----------SMKLWGLVVCHHTSP 374
STLR+PHGCH QYM NM SIASLVMAVI+N D KLWGLVVCHHTSP
Sbjct: 313 GSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNSRGGQQRGRKLWGLVVCHHTSP 372
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R + FPLR ACEFL+ F LQL ME+++A QL EK+ILRTQ LLCDMLLRDAP IV+QS
Sbjct: 373 RTVSFPLRSACEFLMLVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQS 432
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDLVKCDGAALYYG R WL+G+TP E Q+K+IA W L +H D TGLSTDSLA+AGYP
Sbjct: 433 PNIMDLVKCDGAALYYGKRFWLLGITPNEVQIKEIADWFLEHHQDSTGLSTDSLADAGYP 492
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GAA LG AVCGMA A+IT +DFLFWFRSHTAKE+KWGGAKH P+ KD+G KMHPRSSFKA
Sbjct: 493 GAAQLGDAVCGMAAAKITPRDFLFWFRSHTAKEIKWGGAKHDPDEKDDGRKMHPRSSFKA 552
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEVVK RS PWE E++AIHSLQ++ R SFQ++ +++D+K + + N K+QG+DELS
Sbjct: 553 FLEVVKRRSLPWEDIEMDAIHSLQLISRGSFQDI-DDSDTKTMIHARLNDLKLQGMDELS 611
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+VA EMVRLIETATAPI VDSSG INGWNAKVAELTGLP EAMG+SL+ +++ EES
Sbjct: 612 TVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVGEAMGRSLVKDLILEESID 671
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ L+ AL GEE++N+E++L+ F QK+ V ++VNAC+SRD ++NV GVCFVGQD+
Sbjct: 672 VVQRLLYLALQGEEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDVQDNVVGVCFVGQDV 731
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K ++DKF R+QGDY+AI+Q+ NPLIPPIF +DE CSEWN +MEK+TGW R EV+G
Sbjct: 732 TGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPSMEKLTGWKREEVLG 791
Query: 795 KMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L EIFG CR+KGQD +TKFMI L + GQ T+ FPF FF+RQG++V+ LT
Sbjct: 792 KLLVGEIFGMQLMCCRLKGQDAMTKFMIALNSAMDGQDTDRFPFSFFDRQGKYVDALLTV 851
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++RTDAEG + G FCF+ +L AL Q + +AK+KELAYIRQE+KNPL GI
Sbjct: 852 NKRTDAEGSITGVFCFLHTTSVELLQALTVQRATEKVAFAKLKELAYIRQEIKNPLYGIM 911
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F L+E + +SE+QRQ++ETS CERQ+ ++D MDL IE+G
Sbjct: 912 FTRNLMEDTDLSEDQRQFVETSAVCERQLRKVLDDMDLESIEDG 955
>gi|400792|sp|Q01549.1|PHY1_SELMA RecName: Full=Phytochrome 1
gi|22603|emb|CAA43698.1| phytochrome [Selaginella martensii]
Length = 1134
Score = 1199 bits (3103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/948 (62%), Positives = 721/948 (76%), Gaps = 30/948 (3%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQR 89
+K + ADA L A +E+S SG SF+YS+S+ S E +P + +TAYL ++QR
Sbjct: 16 SKHSVRVAQTTADAKLHAVYEESGESGDSFDYSKSINATKSTGETIPAQAVTAYLQRMQR 75
Query: 90 GGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNG-----LIGIDARTLFT 144
GGL+QPFGCMLAVEE +FR+I +S+N EMLDL +S +G IG DARTLFT
Sbjct: 76 GGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGSGQQDVLTIGTDARTLFT 135
Query: 145 PPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPAL 204
+ A A A ++S+LNPI V S + + KPFYAI+HRIDVG+V+DLEP K+ D +
Sbjct: 136 AAASALEKAAGAV-DLSMLNPIWVQSKTSA--KPFYAIVHRIDVGLVMDLEPVKASDTRV 192
Query: 205 -SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGE 263
S AGA+QS KLA AISRLQ+LPGGDIGLLCDTVVE+V+ +TGYD VM Y FH+D+HGE
Sbjct: 193 GSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRDVTGYDLVMAYKFHEDEHGE 252
Query: 264 VVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLC 323
VV+EIRRSDLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC A PV + Q KEL+QP+
Sbjct: 253 VVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAPPVKITQDKELRQPIS 312
Query: 324 LVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------------SMKLWGLVVCH 370
L STLR+PHGCH QYM NMGS+ASLVMA+IIN D +LWGLVVCH
Sbjct: 313 LAGSTLRAPHGCHAQYMGNMGSVASLVMAMIINDNDEPSGGGGGGGQHKGRRLWGLVVCH 372
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTSPR +PF LR ACEFL+Q F LQL ME VA + EK+ILRTQ LLCDMLLRDAP I
Sbjct: 373 HTSPRSVPF-LRSACEFLMQVFGLQLNMEAAVAAHVREKHILRTQTLLCDMLLRDAPIGI 431
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
V+QSP+IMDLVKCDGAALYYG R WL+G+TP+E+Q+KDIA WLL +H D TGLSTDSLA+
Sbjct: 432 VSQSPNIMDLVKCDGAALYYGKRFWLLGITPSEAQIKDIAEWLLEHHKDSTGLSTDSLAD 491
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG VCGMA A+IT+KDFLFWFRSHTAKEVKWGGAKH P+ KD+G KMHPRS
Sbjct: 492 AGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPDDKDDGRKMHPRS 551
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGV 610
SFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+
Sbjct: 552 SFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLQGM 610
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
DELS+VA EMVRLIETATAPI VDSSG INGWNAKVA++TGLP +EAMG+SL E+V
Sbjct: 611 DELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVADVTGLPVTEAMGRSLAKELVLH 670
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
ES VE L+ AL G+E++NVELKL+ F QK V ++VNAC SRD +NV GVCFV
Sbjct: 671 ESADMVERLLYLALQGDEEQNVELKLKTFGGQKDKEAVILVVNACASRDVSDNVVGVCFV 730
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQD+T +KV+MDKF R+QGDY+AI+Q+ NPLIPPIF +DE CSEWN AMEK++GW R
Sbjct: 731 GQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFGYCSEWNPAMEKLSGWRRE 790
Query: 791 EVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EV+GKML EIFG +CR+KGQD +TKFMI+L GQ TE FPF FF+RQG++VE
Sbjct: 791 EVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQDTEKFPFAFFDRQGKYVEA 850
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
LTA++R DAEG + G FCF+ I +LQ AL Q + +K+KELAYIRQE+KNPL
Sbjct: 851 LLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVALSKLKELAYIRQEIKNPL 910
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
GI F L+E++ +SE+Q+QY+ET CE+QI I+D MDL IE+G
Sbjct: 911 YGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDG 958
>gi|168017219|ref|XP_001761145.1| phytochrome 5a [Physcomitrella patens subsp. patens]
gi|162687485|gb|EDQ73867.1| phytochrome 5a [Physcomitrella patens subsp. patens]
Length = 1123
Score = 1191 bits (3082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/941 (61%), Positives = 721/941 (76%), Gaps = 22/941 (2%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQITAYLSKIQ 88
+K + ADA L A +E+S SG SF+YS+SV S + VP + +TAYL ++Q
Sbjct: 16 SKHSVRVQQTTADAKLQAAYEESNDSGDSFDYSKSVGQAAKSTVQQVPAQAVTAYLQRMQ 75
Query: 89 RGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFT 144
RGGL Q FGCMLAVEE TFR+I YSEN L+MLDL ++ ++ G IG D+R+LFT
Sbjct: 76 RGGLTQTFGCMLAVEENTFRVIAYSENALDMLDLMPQAVPSVGQQDVLG-IGTDSRSLFT 134
Query: 145 PPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPAL 204
P S A+L +A ++S++NP+ VHS RS KPFYAILHRIDVGIV+D EP + D +
Sbjct: 135 PSSAAALERATQQSDLSMVNPVSVHS--RSSGKPFYAILHRIDVGIVMDFEPVRPNDVVV 192
Query: 205 SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEV 264
S AG + S KLA AISRLQ+LPGGDIGLLCDTVVE+V++LTGYDRVM Y FH+D+HGEV
Sbjct: 193 SSAGTIHSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEV 252
Query: 265 VSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCL 324
++EIRRSDLEPYLG+H+PA DIPQA+RFLF +NR RMI DC+A PV VIQ K+L+QPL L
Sbjct: 253 LAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRFRMIVDCYAPPVKVIQDKDLRQPLTL 312
Query: 325 VNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN-------SKDSMKLWGLVVCHHTSPRYI 377
STLR+PHGCH QYM NMGSIAS+ MAV++N S+ + +LWGLVVCHHTS R I
Sbjct: 313 AGSTLRAPHGCHAQYMGNMGSIASVTMAVVVNDQEDDGGSQKARRLWGLVVCHHTSARMI 372
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
FPLR ACEFL+Q F LQL ME+++A QL EK+ILRTQ LLCDMLLRDAP IV+QSP+I
Sbjct: 373 SFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQSPNI 432
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYYG R WL+G+TP+E Q+K+IA WLL H D TGLSTDSLA+AGYPGA
Sbjct: 433 MDLVKCDGAALYYGNRFWLLGITPSEQQIKEIADWLLECHKDSTGLSTDSLADAGYPGAN 492
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LLG AVCGMA ARIT KDFLFWFRSHTAKE+KWGGAKH + +D+G KM PRSSF AFLE
Sbjct: 493 LLGDAVCGMAAARITPKDFLFWFRSHTAKEIKWGGAKHDADDRDDGRKMTPRSSFNAFLE 552
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVA 617
VVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DELS+VA
Sbjct: 553 VVKRRSVPWEDIEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLQGMDELSTVA 611
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETAT PI VDSSG INGWNAKVAELTGL +AMG+SL+ +++ EES V+
Sbjct: 612 NEMVRLIETATTPILAVDSSGFINGWNAKVAELTGLSVGDAMGRSLVKDLILEESVEDVQ 671
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL GEE++NVE++LR F QK V ++VNAC+SRD + NV GVCFVGQD+T +
Sbjct: 672 RLLYLALQGEEEQNVEIRLRTFGPQKAKGAVILIVNACSSRDVQENVVGVCFVGQDVTGQ 731
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K+L DKF R+ GDY++I+Q+ NPLIPPIF SD+ C+EW+ +MEK+TGW R EV+GKML
Sbjct: 732 KMLHDKFTRIHGDYKSIVQNPNPLIPPIFGSDDLGYCTEWSPSMEKLTGWKRDEVLGKML 791
Query: 798 PREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
E+FG CR+KGQD +TKFMI+L + GQ T+ +PF FF+RQG+FVE LTA++R
Sbjct: 792 VGEVFGMHLMCCRLKGQDAVTKFMIVLNNAMDGQDTDKYPFSFFDRQGKFVEALLTANKR 851
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
TDA+G + G FCF+ I P+L AL Q + +AK+KELAYIRQE+KNPL GI F
Sbjct: 852 TDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKELAYIRQEIKNPLYGIMFTR 911
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
L+E + +S++Q+Q+++TS CERQ+ I+D MDL IE+G
Sbjct: 912 NLMEDTDLSDDQKQFMDTSAVCERQLRKILDDMDLESIEDG 952
>gi|168060714|ref|XP_001782339.1| phytochrome 2 [Physcomitrella patens subsp. patens]
gi|139001623|dbj|BAF51708.1| phytochrome2 [Physcomitrella patens]
gi|162666198|gb|EDQ52859.1| phytochrome 2 [Physcomitrella patens subsp. patens]
Length = 1130
Score = 1188 bits (3074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/944 (61%), Positives = 720/944 (76%), Gaps = 25/944 (2%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQR 89
+K + ADA L A +E+S SG SF+YS+SV S E V + +TAYL ++QR
Sbjct: 16 SKHSVRVAQTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGENVSAQAVTAYLQRMQR 75
Query: 90 GGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTP 145
GGL+Q FGCML VEE FR+I +SEN EMLDL ++ E+ G IG DARTLFTP
Sbjct: 76 GGLMQTFGCMLCVEESNFRVIAFSENAPEMLDLMPQAVPSVGQQEVLG-IGTDARTLFTP 134
Query: 146 PSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALS 205
S A+L K A + ++++LNPI VH RS KPFYAILHRIDVG+VID EP +S D +S
Sbjct: 135 SSAAALEKCAGAVDVTMLNPISVHC--RSSGKPFYAILHRIDVGLVIDFEPVRSNDAIVS 192
Query: 206 LAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVV 265
AG +QS KLA AISRLQALPGGDIGLLCD VV++V++L+GYDRVM Y FH+D+HGEV+
Sbjct: 193 SAGVLQSHKLAAKAISRLQALPGGDIGLLCDIVVQEVRELSGYDRVMAYKFHEDEHGEVL 252
Query: 266 SEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLV 325
+EIRRSDLEPYLG+H+PA DIPQA+RFLF +N+VRMI DC A PV VIQ K+L+QP+ L
Sbjct: 253 AEIRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMIGDCFASPVKVIQDKDLRQPISLA 312
Query: 326 NSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-----------SMKLWGLVVCHHTSP 374
STLR+PHGCH QYM NM SIASLVMAVI+N D KLWGLVVCHHTSP
Sbjct: 313 GSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNARGGQQRGRKLWGLVVCHHTSP 372
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R + FPLR ACEFL+Q F LQL ME+++A QL EK+ILRTQ LLCDMLLRDAP IV+QS
Sbjct: 373 RTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQS 432
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDLVKCDGAALYYG R WL+G+TP ++Q+K+IA WLL +H D TGLSTDSLA+AGYP
Sbjct: 433 PNIMDLVKCDGAALYYGKRFWLLGITPNDAQIKEIADWLLEHHQDSTGLSTDSLADAGYP 492
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GAA LG AVCGMA A+ITSKDFLFWFRSHTAKE+KWGGAKH P+ KD+G KMHPRSSFKA
Sbjct: 493 GAAQLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPDEKDDGRKMHPRSSFKA 552
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FL VVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DELS
Sbjct: 553 FLVVVKRRSLPWEDIEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLQGMDELS 611
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+VA EMVRLIETATAPI VDS G INGWNAKVAELTGLP EAMG+SL+ +++ ES
Sbjct: 612 TVANEMVRLIETATAPILAVDSGGFINGWNAKVAELTGLPVEEAMGRSLVKDLILNESID 671
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ L+ AL G+E++N+E++L+ F QK+ V ++VNAC+SRD ++NV GVCFVGQD+
Sbjct: 672 VVQRLLHLALQGDEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDVQDNVVGVCFVGQDV 731
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K ++DKF R+QGDY+AI+Q+ NPLIPPIF +DE CSEWN +MEK+TGW R EVIG
Sbjct: 732 TGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPSMEKLTGWKREEVIG 791
Query: 795 KMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L EIFG CR+K QD +TKFMI+L + GQ T+ FPF FF+RQG++V+ LT
Sbjct: 792 KLLVGEIFGIQLMCCRLKSQDAMTKFMIVLNGAMDGQDTDRFPFSFFDRQGKYVDPLLTV 851
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++RTDAEG + G FCF+ +L AL Q + +AK+KELAYIRQE+KNPL GI
Sbjct: 852 NKRTDAEGSITGVFCFLHTTSVELLQALTVQRSTEKVAFAKLKELAYIRQEIKNPLYGIV 911
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F L+E + +S +QRQ++ETS CERQ+ I+D +DL IE+G
Sbjct: 912 FTRNLMEDTDLSVDQRQFVETSAVCERQLRKILDDLDLESIEDG 955
>gi|190586169|gb|ACE79201.1| phytochrome B-4 [Glycine max]
Length = 867
Score = 1184 bits (3063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/870 (64%), Positives = 698/870 (80%), Gaps = 16/870 (1%)
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAK 153
M+AV+EP+FRI+ YS+N +ML + +S + + +G D RTLFT S L K
Sbjct: 1 MIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSAVLLEK 60
Query: 154 AAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQ 213
A ++REISL+NPI +HS R+ KPFY ILHRIDVGIVIDLEP+++ DPALS+AGAVQSQ
Sbjct: 61 AFSAREISLMNPIWIHS--RTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQ 118
Query: 214 KLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDL 273
KLAV AIS+LQ+LPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E +R DL
Sbjct: 119 KLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKRPDL 178
Query: 274 EPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPH 333
EPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA V V+Q + L QPLCLV STLR+PH
Sbjct: 179 EPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPH 238
Query: 334 GCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYAC 385
GCH QYM NMGS ASLVMAVIIN D SM+LWGLV+CHHTS R IPFPLRYAC
Sbjct: 239 GCHAQYMANMGSTASLVMAVIINGNDEEGVGGRTSMRLWGLVICHHTSARCIPFPLRYAC 298
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL+QAF LQL MELQ+A Q EK +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDG
Sbjct: 299 EFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDG 358
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALYY G + +GVTPTE+Q++DI WLL H D TGLSTDSLA+AGYPGAA LG AVCG
Sbjct: 359 AALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDAVCG 418
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS P
Sbjct: 419 MAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLP 478
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
WE +E++AIHSLQ+++RDSF++ E N SK + + + ++QGVDELSSVA EMVRLIE
Sbjct: 479 WESAEMDAIHSLQLILRDSFKDAEHSN-SKAVLDPRMSELELQGVDELSSVAREMVRLIE 537
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TATAPIF VD G INGWNAKV+ELTGLP EAMGKSL+ ++V +ES+ V+ L+ RAL
Sbjct: 538 TATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRALK 597
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
GEEDKNVE+K+R F + Q+ V+++VNAC+S+DY NNV GVCFVGQD+T +K++MDKFI
Sbjct: 598 GEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVMDKFI 657
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF 805
+QGDY+AI+ + NPLIPPIFASD+N CC EWN AMEK+TGW R +VIGKML E+FG+
Sbjct: 658 NIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEVFGSC 717
Query: 806 CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCF 865
C++KG D +TKFMI+L+ + G T+ FPF F +R G+ V+ LTA++R + +G++IG F
Sbjct: 718 CQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMDGQIIGAF 777
Query: 866 CFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN 925
CF+QI+ P+LQ AL+AQ ++ + +A++KELAYI Q VKNPL+GIRF + LLE++ +S
Sbjct: 778 CFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLEATCLSNE 837
Query: 926 QRQYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+Q+LETS ACE+Q++ II +D+ IE+G
Sbjct: 838 QKQFLETSAACEKQMLKIIHDVDIESIEDG 867
>gi|356555999|ref|XP_003546315.1| PREDICTED: phytochrome B-like isoform 2 [Glycine max]
Length = 867
Score = 1184 bits (3063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/870 (64%), Positives = 698/870 (80%), Gaps = 16/870 (1%)
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAK 153
M+AV+EP+FRI+ YS+N +ML + +S + + +G D RTLFT S L K
Sbjct: 1 MIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSAVLLEK 60
Query: 154 AAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQ 213
A ++REISL+NPI +HS R+ KPFY ILHRIDVGIVIDLEP+++ DPALS+AGAVQSQ
Sbjct: 61 AFSAREISLMNPIWIHS--RTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQ 118
Query: 214 KLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDL 273
KLAV AIS+LQ+LPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E +R DL
Sbjct: 119 KLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKRPDL 178
Query: 274 EPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPH 333
EPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA V V+Q + L QPLCLV STLR+PH
Sbjct: 179 EPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPH 238
Query: 334 GCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYAC 385
GCH QYM NMGS ASLVMAVIIN D SM+LWGLVVCHHTS R IPFPLRYAC
Sbjct: 239 GCHAQYMANMGSTASLVMAVIINGNDEEGVGGRTSMRLWGLVVCHHTSARCIPFPLRYAC 298
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL+QAF LQL MELQ+A Q EK +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDG
Sbjct: 299 EFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDG 358
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALYY G + +GVTPTE+Q++DI WLL H D TGLSTDSLA+AGYPGAA LG AVCG
Sbjct: 359 AALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDAVCG 418
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS P
Sbjct: 419 MAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLP 478
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
WE +E++AIHSLQ+++RDSF++ E N SK + + + ++QGVDELSSVA EMVRLIE
Sbjct: 479 WENAEMDAIHSLQLILRDSFKDAEHSN-SKAVLDPRMSELELQGVDELSSVAREMVRLIE 537
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TATAPIF VD G INGWNAKV+ELTGLP EAMGKSL+ ++V +ES+ V+ L+ RAL
Sbjct: 538 TATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRALK 597
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
GEEDKNVE+K+R F + Q+ V+++VNAC+S+DY NNV GVCFVGQD+T +K++MDKFI
Sbjct: 598 GEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVMDKFI 657
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF 805
+QGDY+AI+ + NPLIPPIFASD+N CC EWN AMEK+TGW R +VIGKML E+FG+
Sbjct: 658 NIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEVFGSC 717
Query: 806 CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCF 865
C++KG D +TKFMI+L+ + G T+ FPF F +R G+ V+ LTA++R + +G++IG F
Sbjct: 718 CQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMDGQIIGAF 777
Query: 866 CFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN 925
CF+QI+ P+LQ AL+AQ ++ + +A++KELAYI Q VKNPL+GIRF + LLE++ +S
Sbjct: 778 CFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLEATCLSNE 837
Query: 926 QRQYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+Q+LETS ACE+Q++ II +D+ IE+G
Sbjct: 838 QKQFLETSAACEKQMLKIIHDVDIESIEDG 867
>gi|2499554|sp|Q39557.1|PHY2_CERPU RecName: Full=Phytochrome 2
gi|1314837|gb|AAB67863.1| phytochrome photoreceptor CERPU;PHY0;2 [Ceratodon purpureus]
Length = 1121
Score = 1183 bits (3061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/952 (60%), Positives = 715/952 (75%), Gaps = 18/952 (1%)
Query: 19 TTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEE 78
+ P K+ + +K + ADA L A +E S SG SF+YS+SV E VP
Sbjct: 2 SAPKKTYSSTTSAKSKHSVRVAQTTADAALEAVYEMSGDSGDSFDYSKSVGQSAESVPAG 61
Query: 79 QITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDF--ELNGL-I 135
+TAYL ++QRGGLIQ FGCM+AVEEP F +I YSEN E LDL ++ E++ L I
Sbjct: 62 AVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSMGEMDVLGI 121
Query: 136 GIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLE 195
G D RTLFTP SGA+L KAAA+++ISLLNPI VH R KP YAI HRID+GIVID E
Sbjct: 122 GTDIRTLFTPSSGAALEKAAATQDISLLNPITVHC--RRSGKPLYAIAHRIDIGIVIDFE 179
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
K D ++S AGA+QS KLA AI+RLQALPGGDIGLLCDTVVE+V++LTGYDRVM Y
Sbjct: 180 AVKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYK 239
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRR DLEPYLG+H+PA DIPQA+RFLF +NRVR+I DC A PV +IQ
Sbjct: 240 FHEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASPVKLIQD 299
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------MKLWGL 366
++KQP+ L STLR+PHGCH QYM NMGSIASLVMAVIIN + KLWGL
Sbjct: 300 PDIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAIQRGRKLWGL 359
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLR ACEFL+Q F +QL ME+++A QL EK+ILRTQ LLCDMLLRDA
Sbjct: 360 VVCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLCDMLLRDA 419
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IV+Q+P+IMDLVKCDGAALYYG R WL+G TPTE+Q+KDIA WLL H D TGLSTD
Sbjct: 420 PIGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKDSTGLSTD 479
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+A YPGA LLG AVCGMA A+IT+KDFLFWFRSHTAKEVKWGGAKH P KD+G KM
Sbjct: 480 SLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAEKDDGRKM 539
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K
Sbjct: 540 HPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLK 598
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+ G+DELS VA EMVRLIETATAPI VDS+G INGWNAK+A +TGLP SEAMG+SL+ +
Sbjct: 599 LHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEAMGRSLVKD 658
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V +ES VE L+ A GEE++NVE+KL+ F Q + V ++VNAC+SRD ++V G
Sbjct: 659 LVLDESVVVVERLLYLASQGEEEQNVEIKLKTFGTQTEKEAVILIVNACSSRDVSDSVVG 718
Query: 727 VCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTG 786
VCFVGQD+T +K+ MDKF R+QGDY+ I+++ +PLIPPIF DE C EWN AME +TG
Sbjct: 719 VCFVGQDVTGQKMFMDKFTRIQGDYKTIVKNPHPLIPPIFGGDEYGYCFEWNPAMEALTG 778
Query: 787 WMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQ 843
W EV+GK+L EIFG CR+K QD +TKFMI L + G T+ F F F NR+G+
Sbjct: 779 WKHDEVVGKLLVGEIFGMEMMCCRLKSQDSMTKFMISLNNAMDGTNTDKFSFSFCNREGK 838
Query: 844 FVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEV 903
FVE L+ ++RT+A+G + G FCF+QI +LQ AL Q + AK+KELAYIRQE+
Sbjct: 839 FVEALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLKELAYIRQEI 898
Query: 904 KNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
KNPL GI F +LLE + +S++Q+Q+L+TS CE+Q+ +++ MDL IE+G
Sbjct: 899 KNPLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDG 950
>gi|25986847|gb|AAM94954.1| phytochrome [Physcomitrella patens]
Length = 1130
Score = 1181 bits (3056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 577/944 (61%), Positives = 718/944 (76%), Gaps = 25/944 (2%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQR 89
+K + ADA L A +E+S SG SF+YS+SV S E V + +TAYL ++QR
Sbjct: 16 SKHSVRVAQTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGENVSAQAVTAYLQRMQR 75
Query: 90 GGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTP 145
GGL+Q FGCML VEE FR+I +SEN EMLDL ++ E+ G IG DARTLFTP
Sbjct: 76 GGLMQTFGCMLCVEESNFRVIAFSENAPEMLDLMPQAVPSVGQQEVLG-IGTDARTLFTP 134
Query: 146 PSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALS 205
S A+L K A + ++++LNPI VH RS KPFYAILHRIDVG+VID EP +S D +S
Sbjct: 135 SSAAALEKCAGTVDVTMLNPISVHC--RSSGKPFYAILHRIDVGLVIDFEPVRSNDAIVS 192
Query: 206 LAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVV 265
AG +QS KLA AISRLQALPGGDIGLLCD VV++V++L+GYDRVM Y FH+D+HGEV+
Sbjct: 193 SAGVLQSHKLAAKAISRLQALPGGDIGLLCDIVVQEVRELSGYDRVMAYKFHEDEHGEVL 252
Query: 266 SEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLV 325
+EIRRSDLEPYLG+H+PA DIPQA+RFLF +N+VRMI DC A PV VIQ K+L+QP+ L
Sbjct: 253 AEIRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMIGDCFASPVKVIQDKDLRQPISLA 312
Query: 326 NSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-----------SMKLWGLVVCHHTSP 374
STLR+PHGCH QYM NM SIASLVMAVI+N D KLWGLVVCHHTSP
Sbjct: 313 GSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNARGGQQRGRKLWGLVVCHHTSP 372
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R + FPLR ACEFL+Q F LQL ME+++A QL EK+ILRTQ LLCDMLLRDAP IV+QS
Sbjct: 373 RTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQS 432
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDLVKCDGAAL+YG R WL+G+TP ++Q+K+IA WLL +H D TGLSTDSLA+AGYP
Sbjct: 433 PNIMDLVKCDGAALHYGKRFWLLGITPNDAQIKEIADWLLEHHQDSTGLSTDSLADAGYP 492
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GAA LG AVCGMA A+ITSKDFLFWFRSHTAKE+KWGGAKH P+ KD+G KMHPRSSFKA
Sbjct: 493 GAAQLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPDEKDDGRKMHPRSSFKA 552
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FL VVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+Q +DELS
Sbjct: 553 FLVVVKRRSLPWEDIEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLQDMDELS 611
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+VA EMVRLIETATAPI VDS G INGWNAKVAELTGLP EAMG+SL+ +++ ES
Sbjct: 612 TVANEMVRLIETATAPILAVDSGGFINGWNAKVAELTGLPVEEAMGRSLVKDLILNESID 671
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ L+ AL G+E++N+E++L+ F QK+ V ++VNAC+SRD ++NV GVCFVGQD+
Sbjct: 672 VVQRLLHLALQGDEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDVQDNVVGVCFVGQDV 731
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K ++DKF R+QGDY+AI+Q+ NPLIPPIF +DE CSEWN +MEK+TGW R EVIG
Sbjct: 732 TGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPSMEKLTGWKREEVIG 791
Query: 795 KMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L EIFG CR+K QD +TKFMI+L + GQ T+ FPF FF+RQG++V+ LT
Sbjct: 792 KLLVGEIFGIQLMCCRLKSQDAMTKFMIVLNGAMDGQDTDRFPFSFFDRQGKYVDPLLTV 851
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++RTDAEG + G FCF+ +L AL Q + +AK+KELAYIRQE+KNPL GI
Sbjct: 852 NKRTDAEGSITGVFCFLHTTSVELLQALTVQRSTEKVAFAKLKELAYIRQEIKNPLYGIV 911
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F L+E + +S +QRQ +ETS CERQ+ I+D +DL IE+G
Sbjct: 912 FTRNLMEDTDLSVDQRQLVETSAVCERQLRKILDDLDLESIEDG 955
>gi|1674478|gb|AAB19058.1| phytochrome photoreceptor [Ceratodon purpureus]
Length = 1121
Score = 1179 bits (3051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/952 (60%), Positives = 714/952 (75%), Gaps = 18/952 (1%)
Query: 19 TTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEE 78
+ P K+ + +K + ADA L A +E S SG SF+YS+SV E VP
Sbjct: 2 SAPKKTYSSTTSAKSKHSVRVAQTTADAALEAVYEMSGDSGDSFDYSKSVGQSAESVPAG 61
Query: 79 QITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDF--ELNGL-I 135
+TAYL ++QRGGLIQ FGCM+AVEEP F +I YSEN E LDL ++ E++ L I
Sbjct: 62 AVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSMGEMDVLGI 121
Query: 136 GIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLE 195
G D RTLFTP SGA+L KAAA+++ISLLNPI VH R KP YAI HRID+GIVID E
Sbjct: 122 GTDIRTLFTPSSGAALEKAAATQDISLLNPITVHC--RRSGKPLYAIAHRIDIGIVIDFE 179
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
K D ++S AGA+QS KLA AI+RLQALPGGDIGLLCDTVVE+V++LTGYDRVM Y
Sbjct: 180 AVKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYK 239
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRR DLEPYLG+H+PA DIPQA+RFLF +NRVR+I DC A PV +IQ
Sbjct: 240 FHEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASPVKLIQD 299
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
++KQP+ L STLR+PHGCH QYM NMGSIASLVMAVIIN + KLWGL
Sbjct: 300 PDIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAIQRGRKLWGL 359
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLR ACEFL+Q F +QL ME+++A QL EK+ILRTQ LLCDMLLRDA
Sbjct: 360 VVCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLCDMLLRDA 419
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IV+Q+P+IMDLVKCDGAALYYG R WL+G TPTE+Q+KDIA WLL H D TGLSTD
Sbjct: 420 PIGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKDSTGLSTD 479
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+ YPGA LLG AVCGMA A+IT+KDFLFWFRSHTAKEVKWGGAKH P KD+G KM
Sbjct: 480 SLADRNYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAEKDDGRKM 539
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K
Sbjct: 540 HPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLK 598
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+ G+DELS VA EMVRLIETATAPI VDS+G INGWNAK+A +TGLP SEAMG+SL+ +
Sbjct: 599 LHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEAMGRSLVKD 658
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V +ES VE L+ A GEE++NVE+KL+ F Q + V ++VNAC+SRD ++V G
Sbjct: 659 LVLDESVVVVERLLYLASQGEEEQNVEIKLKTFGTQTEKEAVILIVNACSSRDVSDSVVG 718
Query: 727 VCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTG 786
VCFVGQD+T +K+ MDKF R+QGDY+ I+++ +PLIPPIF DE C EWN AME +TG
Sbjct: 719 VCFVGQDVTGQKMFMDKFTRIQGDYKTIVKNPHPLIPPIFGGDEYGYCFEWNPAMEALTG 778
Query: 787 WMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQ 843
W E++GK+L EIFG CR+K QD +TKFMI L + G T+ F F F NR+G+
Sbjct: 779 WKHDELVGKLLVGEIFGMEMMCCRLKSQDSMTKFMISLNNAMDGTNTDKFSFSFCNREGK 838
Query: 844 FVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEV 903
FVE L+ ++RT+A+G + G FCF+QI +LQ AL Q + AK+KELAYIRQE+
Sbjct: 839 FVEALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLKELAYIRQEI 898
Query: 904 KNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
KNPL GI F +LLE + +S++Q+Q+L+TS CE+Q+ +++ MDL IE+G
Sbjct: 899 KNPLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDG 950
>gi|168003331|ref|XP_001754366.1| phytochrome 5c [Physcomitrella patens subsp. patens]
gi|162694468|gb|EDQ80816.1| phytochrome 5c [Physcomitrella patens subsp. patens]
Length = 1124
Score = 1176 bits (3041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/942 (60%), Positives = 714/942 (75%), Gaps = 23/942 (2%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEG----VPEEQITAYLSKIQ 88
+K + ADA L A +E+S SG +FNYS+SV + VP + +++YL ++Q
Sbjct: 16 SKHSVRVQQTTADAKLQAVYEESNDSGDAFNYSKSVGQAAKATVQQVPAQAVSSYLQRMQ 75
Query: 89 RGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFT 144
RGGL Q FGCMLAVEE TFR+I YSEN EMLDL + ++ G IG DAR+LFT
Sbjct: 76 RGGLTQTFGCMLAVEESTFRVIAYSENAPEMLDLVPHAVPSVGQQDVLG-IGADARSLFT 134
Query: 145 PPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPAL 204
P S ++L +AA++ ++S++NPI VHS RS KPFYAI+HRIDVG+VID EP + D +
Sbjct: 135 PSSASALERAASTSDLSMVNPISVHS--RSSGKPFYAIVHRIDVGVVIDFEPVRPNDVII 192
Query: 205 SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEV 264
S AGA+ S KLA A++RLQ+LPGGDIGLLCD VVE+V++LTGYDRVM Y FHDD+HGEV
Sbjct: 193 STAGALHSHKLAAKAVARLQSLPGGDIGLLCDAVVEEVRELTGYDRVMAYKFHDDEHGEV 252
Query: 265 VSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCL 324
++EIRRSDLE YLG+H+P+ DIPQA+RFLF +NRVRMI DC A PV VIQ K+L+QP+ L
Sbjct: 253 LAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPPVKVIQDKDLRQPITL 312
Query: 325 VNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRY 376
STLR+PHGCH QYM NMGS+AS+ +AVI+N ++ +LWGLVVCHHTS R
Sbjct: 313 AGSTLRAPHGCHAQYMGNMGSVASITLAVIVNDQEEDFGVQQKGRRLWGLVVCHHTSART 372
Query: 377 IPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPS 436
I FPLR ACEFL+Q F LQL ME+++ Q+ EK+ILRTQ LLCDMLLRDAP IV+QSP+
Sbjct: 373 ISFPLRSACEFLMQVFGLQLNMEVELQAQVKEKHILRTQTLLCDMLLRDAPIGIVSQSPN 432
Query: 437 IMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGA 496
IMDLVKCDGAALYYG R WL+G TPTE Q+ +IA WLL H D TGLSTDSLA+AGYPGA
Sbjct: 433 IMDLVKCDGAALYYGKRFWLLGTTPTEQQITEIADWLLEYHKDSTGLSTDSLADAGYPGA 492
Query: 497 ALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFL 556
LLG AVCGMA ARIT KDFLFWFRSHTAKE+KWGGAKH + KD+G KM PRSSF AFL
Sbjct: 493 NLLGDAVCGMAAARITPKDFLFWFRSHTAKEIKWGGAKHDADEKDDGRKMAPRSSFNAFL 552
Query: 557 EVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSV 616
EVVK RS PWE E++AIHSLQ+++R SFQ++ +++D K + + + K+QG+DELS+V
Sbjct: 553 EVVKRRSVPWEDIEMDAIHSLQLILRGSFQDI-DDSDGKTMIHARLHDLKLQGMDELSTV 611
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
A EMVRLIETAT PI VDSSG INGWNAKVAELTGLP +AMG+SL+ +++ EES AV
Sbjct: 612 ANEMVRLIETATVPILAVDSSGFINGWNAKVAELTGLPVGDAMGRSLVKDLILEESVEAV 671
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ AL GEE++NVE++L+ F QK V+ ++VNAC+SRD + NV GVCFVGQD+T
Sbjct: 672 ERLLYLALQGEEEQNVEVRLKTFGQQKSKGVLILIVNACSSRDVQENVVGVCFVGQDVTG 731
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
+K++ DKF R+ GDY++I+Q+ NPLIPPIF DE C+EW+ +MEK+TGW R EV+GKM
Sbjct: 732 QKMVHDKFTRIHGDYKSIVQNPNPLIPPIFGGDELGYCTEWSPSMEKLTGWKREEVLGKM 791
Query: 797 LPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASR 853
L E+FG CR+KGQD +TKFMI+L + GQ T+ FPF FF+RQG+FVE LTA++
Sbjct: 792 LVGEVFGVQLMCCRLKGQDAVTKFMIVLNNAMDGQDTDKFPFSFFDRQGKFVEALLTANK 851
Query: 854 RTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFV 913
RTDA+ + G FCF+ P+L AL Q + +AK+KELAYIRQE+KNPL GI F
Sbjct: 852 RTDADDYITGVFCFLHTASPELLQALTVQRATEKVAFAKLKELAYIRQEIKNPLYGIMFT 911
Query: 914 HKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
L+E + +SE Q+Q+++TS CERQ+ I+D MDL IE+G
Sbjct: 912 RNLMEDTDLSEEQKQFMDTSAVCERQLRKILDDMDLESIEDG 953
>gi|168051425|ref|XP_001778155.1| phytochrome 1 [Physcomitrella patens subsp. patens]
gi|139001617|dbj|BAF51707.1| phytochrome1 [Physcomitrella patens]
gi|162670477|gb|EDQ57045.1| phytochrome 1 [Physcomitrella patens subsp. patens]
Length = 1123
Score = 1172 bits (3031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/933 (61%), Positives = 708/933 (75%), Gaps = 19/933 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVI-SPPEGVPEEQITAYLSKIQRGGLIQPFG 97
+ ADA L A FE+S SG SF+YS+SV S E +P +TAYL ++QRGGL Q FG
Sbjct: 23 VAQTTADAALQAVFEKSGDSGDSFDYSKSVSKSTAESLPSGAVTAYLQRMQRGGLTQSFG 82
Query: 98 CMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGL-IGIDARTLFTPPSGASLAKA 154
CM+AVE FR+I YSEN E+LDL ++ E++ L IG D RTLFT S ASL KA
Sbjct: 83 CMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASLEKA 142
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
A ++E+SLLNPI V N R K YAI HRID+GIVID E K+ D +S AGA+QS K
Sbjct: 143 AEAQEMSLLNPITV--NCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSHK 200
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQALPGGDIGLLCDTVVE+V++LTGYDRVM Y FH+D+HGEVV+EIRR+DLE
Sbjct: 201 LAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADLE 260
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+P DIPQA+RFLF +N+VR+I DC A PV VIQ L+QP+ L STLRSPHG
Sbjct: 261 PYLGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPHG 320
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIPFPLRYAC 385
CH QYM NMGSIASLVMAVIIN + KLWGLVVCHHTSPR +PFPLR AC
Sbjct: 321 CHAQYMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSAC 380
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
FL+Q F LQL ME+++A QL EK+ILRTQ LLCDMLLRDAP IV+Q P+IMDLVKCDG
Sbjct: 381 GFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCDG 440
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALYYG R WL+G TPTESQ+KDIA WLL H D TGLSTDSLA+A YP A LLG AVCG
Sbjct: 441 AALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCG 500
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA A+IT+KDFLFWFRSHTAKE+KWGGAKH P KD+G KMHPRSSFKAFLEVVK RS P
Sbjct: 501 MAAAKITAKDFLFWFRSHTAKEIKWGGAKHDPGEKDDGRKMHPRSSFKAFLEVVKRRSLP 560
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
WE E++AIHSLQ+++R SFQ++ +++D+K + + N K+ +DELS VA EMVRLIE
Sbjct: 561 WEDVEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIE 619
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TATAPI VDS+G INGWNAK+A++TGLP SEAMG+SL+ ++V +ES VE L+ AL
Sbjct: 620 TATAPILAVDSNGMINGWNAKIAQVTGLPVSEAMGRSLVKDLVTDESVAVVERLLYLALR 679
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
GEE++NVE+KL+ F Q + VV ++VNAC+SRD NV GVCFVGQD+T +K+ MDKF
Sbjct: 680 GEEEQNVEIKLKTFGTQTEKGVVILIVNACSSRDVSENVVGVCFVGQDVTGQKMFMDKFT 739
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFG-- 803
R+QGDY+ I+Q+ +PLIPPIF +DE C EWN AME +TGW + EV+GK+L EIFG
Sbjct: 740 RIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGKLLVGEIFGMQ 799
Query: 804 -NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVI 862
CRMK QD +TKFMI L + GQ T+ F F FF+R+G++V+V L+ ++RT+A+G +
Sbjct: 800 MMCCRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTNKRTNADGVIT 859
Query: 863 GCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSI 922
G FCF+QI +LQ AL+ Q + AK+KELAYIRQE+KNPL GI F +LLE + +
Sbjct: 860 GVFCFLQIASSELQQALKVQRATEKVAVAKLKELAYIRQEIKNPLCGITFTRQLLEDTDL 919
Query: 923 SENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
S++Q+Q+L+TS CE+Q+ +++ MDL IE+G
Sbjct: 920 SDDQQQFLDTSAVCEQQLQKVLNDMDLESIEDG 952
>gi|168029421|ref|XP_001767224.1| phytochrome 5b3 [Physcomitrella patens subsp. patens]
gi|162681479|gb|EDQ67905.1| phytochrome 5b3 [Physcomitrella patens subsp. patens]
Length = 1131
Score = 1165 bits (3014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/941 (60%), Positives = 712/941 (75%), Gaps = 21/941 (2%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQITAYLSKIQ 88
+K + ADA L A +E+S SG SF+YS+SV S + VP + +TAYL ++Q
Sbjct: 16 SKHSVRVQQTTADAKLQAVYEESNDSGDSFDYSKSVGQATKSTVQQVPAQAVTAYLQRMQ 75
Query: 89 RGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGLIGI--DARTLFTP 145
RGGL Q FGCMLAVEE TFR+I YSEN EMLDL ++ L ++GI DAR LFTP
Sbjct: 76 RGGLTQNFGCMLAVEESTFRVIAYSENAPEMLDLMPQAVPSVGLKEVLGIGTDARLLFTP 135
Query: 146 PSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALS 205
S ++L +AAA+ +++++NPI VHS R+ KPFYAI+HRIDVGIVID EP +S D +S
Sbjct: 136 SSASTLERAAATSDLTMVNPISVHS--RNSGKPFYAIVHRIDVGIVIDFEPVRSNDVVIS 193
Query: 206 LAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVV 265
AGA+ S KLA A+SRLQ+LPGGDIGLLCD VVE+V++LTGYDRVM Y FHDD+HGEV+
Sbjct: 194 TAGALHSHKLAAKAVSRLQSLPGGDIGLLCDAVVEEVRELTGYDRVMAYKFHDDEHGEVL 253
Query: 266 SEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLV 325
+EIRRSDLE YLG+H+P+ DIPQA+RFLF +NRVRMI DC A PV VIQ K+L+QP+ L
Sbjct: 254 AEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPPVKVIQDKDLRQPITLA 313
Query: 326 NSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYI 377
STLR+PHGCH QYM NMGS+AS+ +AVI++ ++ +LWGLVVCHHTSPR I
Sbjct: 314 GSTLRAPHGCHAQYMGNMGSVASITLAVIVHDQEEDFGVQQKGRRLWGLVVCHHTSPRTI 373
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
FPLR ACEFL+Q F LQL ME+++ Q+ EK+ILRTQ LLCDMLLRDAP IV+QSP+I
Sbjct: 374 SFPLRSACEFLMQVFGLQLNMEVELQAQMKEKHILRTQTLLCDMLLRDAPVGIVSQSPNI 433
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY + WL+G TP+E Q+++IA WLL +H D TGLSTDSLA+AGYPGA
Sbjct: 434 MDLVKCDGAALYYENQFWLLGTTPSEEQIEEIAAWLLEHHKDSTGLSTDSLADAGYPGAN 493
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LLG AVCGMA ARI+SKDFL WFRSH+AKE+KWGGAKH E +D+ KM PRSSF AFLE
Sbjct: 494 LLGDAVCGMAAARISSKDFLLWFRSHSAKEIKWGGAKHDAEDRDDSRKMTPRSSFNAFLE 553
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVA 617
VVK RS PWE E++AIHSLQ+++R SFQ+++ K +++ + K+QG+DELS+VA
Sbjct: 554 VVKRRSVPWEDIEMDAIHSLQLILRGSFQDVDGSG-GKTMIHSRLHDLKLQGMDELSTVA 612
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETATAPI VDS+G INGWNAKVAELTGLP EAMG+SL+ +++ EE VE
Sbjct: 613 NEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGEAMGRSLVKDLILEEYVEVVE 672
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL GEE++N+E+ L+ F QK V ++VNAC+SRD + NV GVCFVGQD+T +
Sbjct: 673 RLLYLALQGEEEQNIEVSLKTFGAQKAKGAVILVVNACSSRDVQENVVGVCFVGQDVTGQ 732
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++ DKF R+ GDY++I+QS NPLIPPIF SDE C EW+ +MEK+TGW R EV+GKML
Sbjct: 733 KMVHDKFTRIHGDYKSIVQSPNPLIPPIFGSDELGYCIEWSPSMEKLTGWKREEVLGKML 792
Query: 798 PREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
EIFG CR+KGQD +TKFMI+L + GQ T+ +PF F +RQG+ VE LTA++R
Sbjct: 793 VGEIFGVHQMCCRLKGQDAVTKFMIVLNNAMDGQDTDKYPFSFHDRQGKLVEALLTANKR 852
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
TDA+G + G FCF+ I P+L AL Q + +AK+KELAYIRQE+KNPL GI F
Sbjct: 853 TDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKELAYIRQEIKNPLYGIMFTR 912
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
L+E + +S+ Q+QY++TS CERQ+ I+D MDL IE+G
Sbjct: 913 NLMEDTDLSDEQKQYMDTSAVCERQLRKILDDMDLESIEDG 953
>gi|159147355|gb|ABW91071.1| phytochrome-4 [Ceratodon purpureus]
Length = 1125
Score = 1163 bits (3009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/952 (59%), Positives = 719/952 (75%), Gaps = 26/952 (2%)
Query: 24 SSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPE-----GVPEE 78
SS A +K +K + ADA L A +E+S SG SF+YS+SV + VP +
Sbjct: 9 SSGASVK--SKHSVRVAQTTADAKLFAVYEESNNSGDSFDYSKSVGQAAKPAVQAQVPAQ 66
Query: 79 QITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL 134
+TAYL ++QRGGL Q FGCM+AVEE TFR+I YSEN E+LDL ++ E+ G
Sbjct: 67 AVTAYLQRMQRGGLTQTFGCMIAVEENTFRVIAYSENAPELLDLMPQAVPSVGQQEVLG- 125
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG DAR+LFTP S A+L +AA++ +++++NPI VH+ RS KPFYAI+HRIDVG+V+D
Sbjct: 126 IGTDARSLFTPSSVAALERAASTHDLTMVNPISVHT--RSSGKPFYAIVHRIDVGVVMDF 183
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP + D +S AG + S KLA AI+RLQ+LPGGDIGLLCDTVVE+V++LTGYDRVM Y
Sbjct: 184 EPVRPNDVVISTAGTLHSHKLAAKAIARLQSLPGGDIGLLCDTVVEEVRELTGYDRVMAY 243
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FHDD+HGEV++EIRRSDLE YLG+H+P+ DIPQA+RFLF +NRVRMI DC A P VIQ
Sbjct: 244 KFHDDEHGEVLAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPPXKVIQ 303
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS--------MKLWGL 366
K+L+QP+ L STLR+PHGCH QYM NMGS+AS+ +AVI+N ++ +LWGL
Sbjct: 304 DKDLRQPVTLAGSTLRAPHGCHAQYMGNMGSVASITLAVIVNDQEDDFGVQQKGRRLWGL 363
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTS R I +PLR ACEFL+Q F LQL ME+++ Q+ EK+ILRTQ LLCDMLLRDA
Sbjct: 364 VVCHHTSARTISYPLRCACEFLMQVFGLQLNMEVELQAQMREKHILRTQTLLCDMLLRDA 423
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IV+QSP+IMDLVKCDGAALYY R WL+G+TP+E Q+KD+A WLL NH D TGLSTD
Sbjct: 424 PIGIVSQSPNIMDLVKCDGAALYYNDRFWLLGITPSEQQIKDVAEWLLENHKDSTGLSTD 483
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYP A LLG AVCGMA ARI+ DFLFWFRSHTAKE+KWGGAK + KD+G KM
Sbjct: 484 SLADAGYPSANLLGDAVCGMAAARISPSDFLFWFRSHTAKEIKWGGAKQEADEKDDGRKM 543
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
PRSS AFLEVVK RS PWE E++AIHSLQ+++R SFQE++ ++ SK + + + K
Sbjct: 544 TPRSSLNAFLEVVKRRSLPWEDIEMDAIHSLQLILRGSFQEIDGDS-SKSMIHARLHDMK 602
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELS+VA EMVRLIETATAPI VDS+G INGWNAKVAELTGLP +AMG+SL+++
Sbjct: 603 LQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGDAMGRSLVND 662
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
++ +ES VE L+ AL GEE++N+E++LR F QK V ++VNAC+SRD + NV G
Sbjct: 663 LILDESVEVVERLLYLALQGEEEQNIEVQLRTFGPQKSKGAVILIVNACSSRDVQENVVG 722
Query: 727 VCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTG 786
VCFVGQD+T +K++ DKF R+ GDY++I+Q+ NPLIPPIF SDE C+EW+ +MEK+TG
Sbjct: 723 VCFVGQDVTGQKMVHDKFTRIHGDYKSIVQNPNPLIPPIFGSDELGSCTEWSPSMEKLTG 782
Query: 787 WMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQ 843
W R EV+GKML E+FG CR+KGQD +TKFMI++ + GQ T+ +PF FF+R G+
Sbjct: 783 WKREEVLGKMLVGEVFGMQQMCCRLKGQDAVTKFMIVINNAMDGQDTDKYPFSFFDRNGK 842
Query: 844 FVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEV 903
FVE LTA++RTDA+G + G FCF+ I P+L AL Q + +AK+KELAYIRQE+
Sbjct: 843 FVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKELAYIRQEI 902
Query: 904 KNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
KNPL GI F L+E + +S+ Q+Q+++TS CERQ+ I+D MDL IE+G
Sbjct: 903 KNPLYGIMFTRNLMEDTDLSDEQKQFMDTSAVCERQLRKILDDMDLESIEDG 954
>gi|3724346|dbj|BAA33775.1| phytochrome 2 [Adiantum capillus-veneris]
Length = 1140
Score = 1162 bits (3007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/948 (59%), Positives = 716/948 (75%), Gaps = 31/948 (3%)
Query: 36 KTIIDHYNADAGLLAEFEQSVASG----KSFNYSRSVISP-----PEGVPEEQITAYLSK 86
+ ++ ADA L A FEQ+ + G SF+Y RS+ E VP + +TAYL +
Sbjct: 30 RVVVAQTTADAKLHAVFEQAQSEGDTGGSSFDYMRSIEDARGSVLSERVPAQAVTAYLQR 89
Query: 87 IQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL---IGIDARTL 142
+QRGGLIQPFGCMLA+EE +FR+I YSEN EMLDL +S + L IG DARTL
Sbjct: 90 MQRGGLIQPFGCMLALEEGSFRVIAYSENAAEMLDLMPQSVPSVGVQVLVLGIGTDARTL 149
Query: 143 FTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDP 202
FT S A+L KA+ + ++S+LNPI VH RS KPF AI+HRIDVG+VID EP + D
Sbjct: 150 FTYASAAALEKASGAVDVSMLNPITVHC--RSSSKPFNAIVHRIDVGLVIDFEPVRPADV 207
Query: 203 AL-SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
A+ + AGA+QS KLA AISRLQALP GDI LLCD+VVE+V++LTGYDRVM Y FH+D+H
Sbjct: 208 AVWAAAGALQSHKLAAKAISRLQALPVGDIDLLCDSVVEEVRELTGYDRVMAYKFHEDEH 267
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC A+PV VIQ KEL+QP
Sbjct: 268 GEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRALPVRVIQDKELRQP 327
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-----------MKLWGLVVCH 370
L L STLR+PHGCH QYM NMGSIASLVMAV++N D +LWGLVVCH
Sbjct: 328 LSLAGSTLRAPHGCHSQYMANMGSIASLVMAVVVNDNDEDVSNRSQQPKMRRLWGLVVCH 387
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HT+PR +PF LR ACEFL+Q F LQL MEL++A Q+ EK+ILRTQ LLCDMLLRDAP I
Sbjct: 388 HTTPRAVPFALRSACEFLMQVFGLQLNMELELAAQMREKHILRTQTLLCDMLLRDAPIGI 447
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
V++SP+IMDLVKCDGAALYYG WL+G TP E+Q+KD+A WLL+ H D TGLSTDSLA+
Sbjct: 448 VSESPNIMDLVKCDGAALYYGKNFWLLGTTPIEAQIKDLAEWLLDVHRDSTGLSTDSLAD 507
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A+IT++DFLFWFRSHTAKE+KWGGAKH PE +D+G KMHPRS
Sbjct: 508 AGYPGAAALGDAVCGMAAAKITTRDFLFWFRSHTAKEIKWGGAKHDPEDRDDGRKMHPRS 567
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGV 610
SFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+ G+
Sbjct: 568 SFKAFLEVVKRRSLPWEDMEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLHGM 626
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
DELS+VA EMVRLIETATAPIF VD+ G INGWNAKVAELTGL EAM +SL+ +VV
Sbjct: 627 DELSTVANEMVRLIETATAPIFAVDAGGFINGWNAKVAELTGLTVEEAMSRSLVRDVVVN 686
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S E ++ AL G+E++NVE+KL+ + Q V ++VNAC+SRD+ +NV GVCFV
Sbjct: 687 ASMETAERVLDLALQGQEEQNVEIKLKTYGDQAIKGPVILIVNACSSRDFTDNVVGVCFV 746
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQD+T +KV+MDKF R+QGDY+ I+Q+ NPLIPPIF +DE CSEWN AMEK +GW R
Sbjct: 747 GQDVTGQKVVMDKFTRIQGDYKTIVQNPNPLIPPIFGADEFGYCSEWNPAMEKFSGWKRE 806
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
+VIGKML E+FG+ C+++GQD +TKFMI+L + G+ ++ FPFGFF+R G++ E
Sbjct: 807 DVIGKMLIGEVFGSDLACCKLRGQDSMTKFMIILNAAMGGRDSDRFPFGFFDRYGKYAEA 866
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L A++RTD++G + G FCF+ P+LQ AL+ Q ++KE+AY++QE++NPL
Sbjct: 867 LLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTALDRLKEVAYMKQEIRNPL 926
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
GI F KLL+++++++ Q+Q +ETS CE+Q+ I+D + +++G
Sbjct: 927 YGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDEDNFEKLDQG 974
>gi|3724336|dbj|BAA33774.1| phytochrome 2 [Adiantum capillus-veneris]
Length = 973
Score = 1162 bits (3005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/938 (59%), Positives = 711/938 (75%), Gaps = 31/938 (3%)
Query: 36 KTIIDHYNADAGLLAEFEQSVASG----KSFNYSRSVISP-----PEGVPEEQITAYLSK 86
+ ++ ADA L A FEQ+ + G SF+Y RS+ E VP + +TAYL +
Sbjct: 30 RVVVAQTTADAKLHAVFEQAQSEGDTGGSSFDYMRSIEDARGSVLSERVPAQAVTAYLQR 89
Query: 87 IQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL---IGIDARTL 142
+QRGGLIQPFGCMLA+EE +FR+I YSEN EMLDL +S + L IG DARTL
Sbjct: 90 MQRGGLIQPFGCMLALEEGSFRVIAYSENAAEMLDLMPQSVPSVGVQVLVLGIGTDARTL 149
Query: 143 FTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDP 202
FT S A+L KA+ + ++S+LNPI VH RS KPF AI+HRIDVG+VID EP + D
Sbjct: 150 FTYASAAALEKASGAVDVSMLNPITVHC--RSSSKPFNAIVHRIDVGLVIDFEPVRPADV 207
Query: 203 AL-SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
A+ + AGA+QS KLA AISRLQALP GDI LLCD+VVE+V++LTGYDRVM Y FH+D+H
Sbjct: 208 AVWAAAGALQSHKLAAKAISRLQALPVGDIDLLCDSVVEEVRELTGYDRVMAYKFHEDEH 267
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC A+PV VIQ KEL+QP
Sbjct: 268 GEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRALPVRVIQDKELRQP 327
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-----------MKLWGLVVCH 370
L L STLR+PHGCH QYM NMGSIASLVMAV++N D +LWGLVVCH
Sbjct: 328 LSLAGSTLRAPHGCHSQYMANMGSIASLVMAVVVNDNDEDVSNRSQQPKMRRLWGLVVCH 387
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HT+PR +PF LR ACEFL+Q F LQL MEL++A Q+ EK+ILRTQ LLCDMLLRDAP I
Sbjct: 388 HTTPRAVPFALRSACEFLMQVFGLQLNMELELAAQMREKHILRTQTLLCDMLLRDAPIGI 447
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
V++SP+IMDLVKCDGAALYYG WL+G TP E+Q+KD+A WLL+ H D TGLSTDSLA+
Sbjct: 448 VSESPNIMDLVKCDGAALYYGKNFWLLGTTPIEAQIKDLAEWLLDVHRDSTGLSTDSLAD 507
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A+IT++DFLFWFRSHTAKE+KWGGAKH PE +D+G KMHPRS
Sbjct: 508 AGYPGAAALGDAVCGMAAAKITTRDFLFWFRSHTAKEIKWGGAKHDPEDRDDGRKMHPRS 567
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGV 610
SFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+ G+
Sbjct: 568 SFKAFLEVVKRRSLPWEDMEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLHGM 626
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
DELS+VA EMVRLIETATAPIF VD+ G INGWNAKVAELTGL EAM +SL+ +VV
Sbjct: 627 DELSTVANEMVRLIETATAPIFAVDAGGFINGWNAKVAELTGLTVEEAMSRSLVRDVVVN 686
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S E ++ AL G+E++NVE+KL+ + Q V ++VNAC+SRD+ +NV GVCFV
Sbjct: 687 ASMETAERVLDLALQGQEEQNVEIKLKTYGDQAIKGPVILIVNACSSRDFTDNVVGVCFV 746
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQD+T +KV+MDKF R+QGDY+ I+Q+ NPLIPPIF +DE CSEWN AMEK +GW R
Sbjct: 747 GQDVTGQKVVMDKFTRIQGDYKTIVQNPNPLIPPIFGADEFGYCSEWNPAMEKFSGWKRE 806
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
+VIGKML E+FG+ C+++GQD +TKFMI+L + G+ ++ FPFGFF+R G++ E
Sbjct: 807 DVIGKMLIGEVFGSDLACCKLRGQDSMTKFMIILNAAMGGRDSDRFPFGFFDRYGKYAEA 866
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L A++RTD++G + G FCF+ P+LQ AL+ Q ++KE+AY++QE++NPL
Sbjct: 867 LLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSARTALDRLKEVAYMKQEIRNPL 926
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
GI F KLL+++++++ Q+Q +ETS CE+Q+ I+D
Sbjct: 927 YGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILD 964
>gi|25986845|gb|AAM94953.1| phytochrome [Physcomitrella patens]
Length = 1123
Score = 1159 bits (2999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/929 (61%), Positives = 704/929 (75%), Gaps = 19/929 (2%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVI-SPPEGVPEEQITAYLSKIQRGGLIQPFGCMLA 101
ADA L A FE+S SG SF+YS+SV S E +P +TAYL ++QRGGL Q FGCM+A
Sbjct: 27 TADAALQAVFEKSGDSGDSFDYSKSVSKSTAESLPSGAVTAYLQRMQRGGLTQSFGCMIA 86
Query: 102 VEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGL-IGIDARTLFTPPSGASLAKAAASR 158
VE FR+I YSEN E+LDL ++ E++ L IG D RTLFT S ASL KAA ++
Sbjct: 87 VEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASLEKAAEAQ 146
Query: 159 EISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVS 218
E+SLLNPI V N R K YAI HRID+GIVID E K+ D +S AGA+QS KLA
Sbjct: 147 EMSLLNPITV--NCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSHKLAAK 204
Query: 219 AISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLG 278
AI+RLQALPGG+IGLLCDTVVE+V++LTGYDRVM Y FH+D+HGEVV+EIRR+DLEPYLG
Sbjct: 205 AITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADLEPYLG 264
Query: 279 IHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQ 338
+H+P DIPQA+RFLF +N+VR+I DC A PV VIQ L+QP+ L STLRSPHGCH Q
Sbjct: 265 LHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPHGCHAQ 324
Query: 339 YMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
YM NMGSIASLVMAVIIN + KLWGLVVCHHTSPR +PFPLR AC FL+
Sbjct: 325 YMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACGFLM 384
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
Q F LQL ME+++A QL EK+ILRTQ LLCDMLLRDAP IV+Q P+IMDLVKCDGAALY
Sbjct: 385 QVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCDGAALY 444
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YG R WL+G TPTESQ+KDIA WLL H D TGLSTDSLA+A YP A LLG AVCGMA A
Sbjct: 445 YGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMAAA 504
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
+IT+KDFLFWFRSHTAKE+KWGGAKH P KD+G KMHPRSSFKAFLEVVK RS PWE
Sbjct: 505 KITAKDFLFWFRSHTAKEIKWGGAKHDPGEKDDGRKMHPRSSFKAFLEVVKRRSLPWEDV 564
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++D+K + + N K+ +DELS VA EMVRLIETATA
Sbjct: 565 EMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIETATA 623
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEED 689
PI VDS+G INGWNAK+A++TGLP SEA G+SL+ ++V +ES VE L+ AL GEE+
Sbjct: 624 PILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAVVERLLYLALRGEEE 683
Query: 690 KNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQG 749
+NVE+KL+ F Q + VV ++V+AC+S NV GVCFVGQD+T +K+ MDKF R+QG
Sbjct: 684 QNVEIKLKTFGTQTEKGVVILIVDACSSIHVSENVVGVCFVGQDVTGQKMFMDKFTRIQG 743
Query: 750 DYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFG---NFC 806
DY+ I+Q+ +PLIPPIF +DE C EWN AME +TGW + EV+GK+L EIFG C
Sbjct: 744 DYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGKLLVGEIFGMQMMCC 803
Query: 807 RMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFC 866
RMK QD +TKFMI L + GQ T+ F F FF+R+G++V+V L+ ++RT+A+G + G FC
Sbjct: 804 RMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTNKRTNADGVITGVFC 863
Query: 867 FMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQ 926
F+QI +LQ AL+ Q + AK+KELAYIRQE+KNPL GI F +LLE + +S++Q
Sbjct: 864 FLQIASSELQQALKVQRATEKVAVAKLKELAYIRQEIKNPLCGITFTRQLLEDTDLSDDQ 923
Query: 927 RQYLETSDACERQIMTIIDGMDLRCIEEG 955
+Q+L+TS CE+Q+ +++ MDL IE+G
Sbjct: 924 QQFLDTSAVCEQQLQKVLNDMDLESIEDG 952
>gi|139001625|dbj|BAF51709.1| phytochrome3 [Physcomitrella patens]
Length = 1122
Score = 1159 bits (2997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/929 (61%), Positives = 696/929 (74%), Gaps = 20/929 (2%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEG-VPEEQITAYLSKIQRGGLIQPFGCMLA 101
ADA L A FE+S SG +F+YS+SV G + +TAYL ++QRGGL Q FGCM+A
Sbjct: 27 TADAALHAVFEKSGVSGDNFDYSKSVSKSTAGSLHTGAVTAYLQRMQRGGLTQSFGCMVA 86
Query: 102 VEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGL-IGIDARTLFTPPSGASLAKAAASR 158
VEE FR+I YSEN E LDL ++ E+N L IG D RTLFTP S ASL KAA ++
Sbjct: 87 VEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFTPSSAASLEKAAETQ 146
Query: 159 EISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVS 218
EISLLNPI V+ S+ KP YAI HRID+GIVID E D +S GA+QS KLA
Sbjct: 147 EISLLNPITVYCRSK---KPLYAIAHRIDIGIVIDFEAVNMNDVTISADGALQSHKLAAK 203
Query: 219 AISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLG 278
AI+RLQALPGGDIGLLCDTVVE+V++LTGYDRVM Y FH+D+HGEVV+EIRR+DLEPYLG
Sbjct: 204 AITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVAEIRRTDLEPYLG 263
Query: 279 IHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQ 338
+H+PA DIPQA+RFLF +NRVRMI DC A PV ++Q L+QP+ L STLRSPHGCH Q
Sbjct: 264 LHYPATDIPQASRFLFMKNRVRMIGDCSAPPVKIVQDPNLRQPVSLAGSTLRSPHGCHAQ 323
Query: 339 YMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
YM NMGSI+S+VMAVIIN + KLWGLVVCHHTSPR +PFPLR ACEFL+
Sbjct: 324 YMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACEFLM 383
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
Q F LQL ME+++A QL EK+ILRTQ LLCDMLLRDAP IV+Q P+IMDLVKCDGAALY
Sbjct: 384 QVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQVPNIMDLVKCDGAALY 443
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YG R WL+G TPTESQ+KDIA WLL H D TGLSTDSLA+A YP A LLG AVCGMA A
Sbjct: 444 YGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMAAA 503
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
+ITSKDFLFWFRSHTAKE+KWGGAKH P KD+ KMHPRSSFKAFLEVVK RS PWE
Sbjct: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSSFKAFLEVVKRRSLPWEDV 563
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++D+K + + N K+ +DELS VA EMVRLIETATA
Sbjct: 564 EMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLHDMDELSIVANEMVRLIETATA 622
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEED 689
PI VDS+G INGWNAK+A+ TGLP +EAMG+SL+ ++V +ES VE L+ AL GEE+
Sbjct: 623 PILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEVVERLLYLALRGEEE 682
Query: 690 KNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQG 749
+ VE+KL+ F Q V ++VNAC SRD NV GVCFVGQD+T +K+ MDKF R+QG
Sbjct: 683 QGVEIKLKTFGAQTVKGAVILIVNACASRDVSENVVGVCFVGQDVTGQKMFMDKFTRIQG 742
Query: 750 DYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFG---NFC 806
DY+ I+Q+ +PLIPPIF +DE C EWN AME +TGW R EVIGK+L EIFG C
Sbjct: 743 DYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKRDEVIGKLLVGEIFGMQKMCC 802
Query: 807 RMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFC 866
+MK QD +TKFMI L + GQ T+ F FF+R+G++V+ L+ ++RT+A+G + G C
Sbjct: 803 QMKSQDAMTKFMISLNSAMDGQNTDKFSLSFFDREGRYVDALLSTNKRTNADGAITGVIC 862
Query: 867 FMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQ 926
F+QI +LQ AL Q + AK+KELAYIRQE+KNPL GI F +LLE + +S +Q
Sbjct: 863 FLQIASSELQQALRVQQATEKVAIAKLKELAYIRQEIKNPLCGITFTRQLLEDTDLSNDQ 922
Query: 927 RQYLETSDACERQIMTIIDGMDLRCIEEG 955
+Q+L+TS CE+Q+ +++ +DL IE+G
Sbjct: 923 KQFLDTSAVCEQQLQKVLNDLDLESIEDG 951
>gi|1172496|sp|P42499.1|PHYB_SOYBN RecName: Full=Phytochrome B
gi|516103|gb|AAA34000.1| phytochrome B [Glycine max]
Length = 1156
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/954 (60%), Positives = 710/954 (74%), Gaps = 45/954 (4%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y D G+ A FEQS SG+SFNYS S+ E VPE+QITAYL KIQRGG IQPFG
Sbjct: 42 IAQYTED-GVHAVFEQSGESGRSFNYSESIRIASESVPEQQITAYLVKIQRGGFIQPFGS 100
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS---------EDFELNG--------------LI 135
M+AV+EP+FRI+GYS+N +ML + +S F L +
Sbjct: 101 MIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGPQSVPSLDDKNDAAFAL 160
Query: 136 GIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLE 195
G D R LFT S L KA ++REISL+NPI +HS R+ KPFY ILHRIDVGIVIDLE
Sbjct: 161 GTDVRALFTHSSALLLEKAFSAREISLMNPIWIHS--RTSGKPFYGILHRIDVGIVIDLE 218
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P+++ DPALS+AGAVQSQ+ V AIS+LQ+LP D+ LLCDTVVE V++LTGYDRVM+Y
Sbjct: 219 PARTEDPALSIAGAVQSQEALVRAISQLQSLPSADVKLLCDTVVESVRELTGYDRVMVYK 278
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVVSE +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA V V+Q
Sbjct: 279 FHEDEHGEVVSESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQD 338
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLV 367
+ L QPLCLV STL +PHGCH QYM NMGSIASLVMAVIIN D SM+LWGLV
Sbjct: 339 EALVQPLCLVGSTLGAPHGCHAQYMANMGSIASLVMAVIINGNDEEGVGGRSSMRLWGLV 398
Query: 368 VCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAP 427
VCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A Q EK +LRTQ LLCDMLLRD+P
Sbjct: 399 VCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSP 458
Query: 428 FSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDS 487
IVTQSPSIMDLVKCDGAALY+ G + +GVTPTE+Q++DI WLL HGD TGLSTDS
Sbjct: 459 TGIVTQSPSIMDLVKCDGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDS 518
Query: 488 LAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMH 547
L +AGYPG LG G A IT KDFLFWFRSHTAKE+KWGGAK + G +MH
Sbjct: 519 LGDAGYPGLPRLGMQFVGWQVAYITEKDFLFWFRSHTAKEIKWGGAKLILRTRMMGQRMH 578
Query: 548 PRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM 607
P SSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ E N SK + + ++
Sbjct: 579 PLSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEHRN-SKAVVDPHVSEQEL 637
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QGVDELSSVA EMVRLIETATAPIF VD G +NGWNAKV+ELTGLP EAMGKSL+ ++
Sbjct: 638 QGVDELSSVAREMVRLIETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDL 697
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
V +ES+ V L+ R EEDKNVE K+R F + Q+ +++VNAC+S+ + NNV GV
Sbjct: 698 VFKESEETVNKLLSR----EEDKNVETKMRTFGKEHQNKAAFLVVNACSSKHFTNNVVGV 753
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CFVGQ++T +K++M KFI +QGDY+AI+ S NPLIPPIFASD+N CC EWN AMEK+
Sbjct: 754 CFVGQNVTGQKIVMHKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLDPS 813
Query: 788 MRH------EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQ 841
+ +VIGKML E+FG+ C++KG D +TKFMI+L+ + GQ T+ FPF F +R
Sbjct: 814 NENVTVGGVDVIGKMLVGEVFGSCCQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRH 873
Query: 842 GQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQ 901
G++V+ LTA++R + EG++IG FCF+QI+ P+LQ AL+AQ ++ + ++KELAYI Q
Sbjct: 874 GKYVQTFLTANKRVNMEGQIIGAFCFLQIMSPELQQALKAQRQQEKEFLGRMKELAYICQ 933
Query: 902 EVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
VK PL+GIRF + LLE++S++ Q+Q+LETS ACE+Q++ II +DL IE+G
Sbjct: 934 GVKKPLSGIRFTNSLLEATSLTNEQKQFLETSVACEKQMLKIIRDVDLESIEDG 987
>gi|25986851|gb|AAM94956.1| phytochrome [Ceratodon purpureus]
Length = 1126
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/944 (59%), Positives = 714/944 (75%), Gaps = 25/944 (2%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEG-----VPEEQITAYLSKI 87
+K + +DA L A +E+S SG SF+YS+SV + VP + +TAYL ++
Sbjct: 16 SKHSVRVAQTTSDAKLQAVYEESNDSGDSFDYSKSVAQAAKSTGQQQVPAQAVTAYLQRM 75
Query: 88 QRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLF 143
QRGGL Q FGCMLAVEE TFR+I YSEN E+LD+ ++ ++ G IG DAR+LF
Sbjct: 76 QRGGLTQTFGCMLAVEENTFRVIAYSENAPELLDVMPQAVPSLGQQDVLG-IGTDARSLF 134
Query: 144 TPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPA 203
TP S +L +AA + ++SL+NPI VHS R+ KPFYAI+HRIDVGIV+ EP + D
Sbjct: 135 TPSSATALERAAGAADLSLVNPISVHS--RASGKPFYAIIHRIDVGIVMGFEPVRPNDVI 192
Query: 204 LSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGE 263
+S AG + S KLA AI+RLQAL GGDIGLLCDTVVE+V++LTGYDRVM Y FH+D+HGE
Sbjct: 193 VSTAGTLHSHKLAAKAIARLQALSGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGE 252
Query: 264 VVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLC 323
V++EIRRSDLEPYLG+H+P+ DIPQA+RFLF +NRVRMI DC A PV VIQ K+L+QP+
Sbjct: 253 VLAEIRRSDLEPYLGLHYPSTDIPQASRFLFMKNRVRMIVDCWAPPVKVIQDKDLRQPIS 312
Query: 324 LVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGLVVCHHTSP 374
L STLR+PHGCH QYM NMGS+AS+ MAVI N ++ + +LWGLVVCHHTS
Sbjct: 313 LAGSTLRAPHGCHAQYMGNMGSVASVTMAVIXNDQEDDFGGQQTRARRLWGLVVCHHTSA 372
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R I FPLR ACEFL+Q F LQL ME+++ Q EK+ILRTQ +LCDMLLRDAP IV+Q
Sbjct: 373 RTISFPLRSACEFLMQVFGLQLNMEVELENQKREKHILRTQTMLCDMLLRDAPVGIVSQC 432
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDLVKCDGAALYYG R WL+G+TP+E Q+++IA WLL +H D TGLSTDSLA+AGYP
Sbjct: 433 PNIMDLVKCDGAALYYGKRFWLLGITPSEEQIEEIANWLLEHHQDSTGLSTDSLADAGYP 492
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GA LLG AVCGMA ARIT DFLFWFRSHTAKE+K GGAKH + KD+G KM PRSSF A
Sbjct: 493 GANLLGDAVCGMAAARITPTDFLFWFRSHTAKEIKRGGAKHEADDKDDGRKMTPRSSFNA 552
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEV+K RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DELS
Sbjct: 553 FLEVMKRRSVPWEDIEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLQGMDELS 611
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+VA EMVRLIETATAPI VDS+G INGWNAKVAELTGLP +AMG+SL+ +++ +ES
Sbjct: 612 TVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGDAMGRSLVQDLIVDESVE 671
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
VE L+ AL G+E+++VE++LR F QK V ++VNAC+SRD ++NV GVCFVGQD+
Sbjct: 672 VVERLLYLALQGDEEQDVEIQLRTFGPQKGKGAVILIVNACSSRDVQDNVVGVCFVGQDV 731
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K + DKF R+ GDY++I+Q+ NPLIPPIF SDE C+EW+ +MEK+TGW R EV+G
Sbjct: 732 TSQKQVHDKFTRIHGDYKSIVQNPNPLIPPIFGSDELGYCTEWSPSMEKLTGWKRDEVLG 791
Query: 795 KMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
KML E+FG CR+KGQD +TKFMI+L + GQ T+ +PF F++RQG+FVE LTA
Sbjct: 792 KMLVGEVFGTQQICCRLKGQDSVTKFMIVLNNAMDGQDTDKYPFSFYDRQGKFVEALLTA 851
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++RTDA+G + G FCF+ I P+L AL Q + +AK+KELAYIRQE+KNPL GI
Sbjct: 852 NKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKELAYIRQEIKNPLYGIM 911
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F L+E + +S+ Q+Q+++TS CERQ+ I+D MDL IE+G
Sbjct: 912 FTRNLMEDTDLSDEQKQFMDTSAVCERQLRKILDDMDLESIEDG 955
>gi|168027033|ref|XP_001766035.1| phytochrome 3 [Physcomitrella patens subsp. patens]
gi|162682678|gb|EDQ69094.1| phytochrome 3 [Physcomitrella patens subsp. patens]
Length = 1123
Score = 1154 bits (2984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/934 (60%), Positives = 697/934 (74%), Gaps = 21/934 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEG-VPEEQITAYLSKIQRGGLIQPFG 97
+ ADA L A FE+S SG +F+YS+SV G + +TAYL ++QRGGL Q FG
Sbjct: 23 VAQTTADAALHAVFEKSGVSGDNFDYSKSVSKSTAGSLHTGAVTAYLQRMQRGGLTQSFG 82
Query: 98 CMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGL-IGIDARTLFTPPSGASLAKA 154
CM+AVEE FR+I YSEN E LDL ++ E+N L IG D RTLFTP S ASL KA
Sbjct: 83 CMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFTPSSAASLEKA 142
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
A ++EISLLNPI V+ S+ KP YAI HRID+GIVID E D +S GA+QS K
Sbjct: 143 AETQEISLLNPITVYCRSK---KPLYAIAHRIDIGIVIDFEAVNMNDVTISADGALQSHK 199
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQALPGGDIGLLCDTVVE+V++LTGYDRVM Y FH+D+HGEVV+EIRR+DLE
Sbjct: 200 LAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVAEIRRTDLE 259
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF +NRVRMI DC A PV ++Q L+QP+ L STLRSPHG
Sbjct: 260 PYLGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPVKIVQDPNLRQPVSLAGSTLRSPHG 319
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIPFPLRYAC 385
CH QYM NMGSI+S+VMAVIIN + KLWGLVVCHHTSPR +PFPLR AC
Sbjct: 320 CHAQYMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKLWGLVVCHHTSPRTVPFPLRSAC 379
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL+Q F LQL ME+++A QL EK+ILRTQ LLCDMLLRDAP IV+Q P+IMDLVKCDG
Sbjct: 380 EFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQVPNIMDLVKCDG 439
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALYYG R WL+G TPTESQ+KDIA WLL H D TGLSTDSLA+A YP A LLG AVCG
Sbjct: 440 AALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCG 499
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA A+ITSKDFLFWFRSHTAKE+KWGGAKH P KD+ KMHPRSSFKAFLEVVK RS P
Sbjct: 500 MAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSSFKAFLEVVKRRSLP 559
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
WE E++AIHSLQ+++R SFQ++ +++D+K + + N K+ +DELS VA EMVRLIE
Sbjct: 560 WEDVEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLHDMDELSIVANEMVRLIE 618
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TATAPI VDS+G INGWNAK+A+ TGLP +EAMG+SL+ ++V +ES VE L+ AL
Sbjct: 619 TATAPILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEVVERLLYLALR 678
Query: 686 G-EEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKF 744
G EE++ VE+KL+ F Q V ++VNAC SRD NV GVCFVGQD+T +K+ MDKF
Sbjct: 679 GSEEEQGVEIKLKTFGAQTVKGAVILIVNACASRDVSENVVGVCFVGQDVTGQKMFMDKF 738
Query: 745 IRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFG- 803
R+QGDY+ I+Q+ +PLIPPIF +DE C EWN AME +TGW R EVIGK+L EIFG
Sbjct: 739 TRIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKRDEVIGKLLVGEIFGM 798
Query: 804 --NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKV 861
C+MK QD +TKFMI L + GQ T+ F FF+R+G++V+ L+ ++RT+A+G +
Sbjct: 799 QKMCCQMKSQDAMTKFMISLNSAMDGQNTDKFSLSFFDREGRYVDALLSTNKRTNADGAI 858
Query: 862 IGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSS 921
G CF+QI +LQ AL Q + AK+KELAYIRQE+KNPL GI F +LLE +
Sbjct: 859 TGVICFLQIASSELQQALRVQQATEKVAIAKLKELAYIRQEIKNPLCGITFTRQLLEDTD 918
Query: 922 ISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+S +Q+Q+L+TS CE+Q+ +++ +DL IE+G
Sbjct: 919 LSNDQKQFLDTSAVCEQQLQKVLNDLDLESIEDG 952
>gi|25986849|gb|AAM94955.1| phytochrome [Physcomitrella patens]
Length = 1122
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/933 (60%), Positives = 694/933 (74%), Gaps = 20/933 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEG-VPEEQITAYLSKIQRGGLIQPFG 97
+ ADA L A FE+S SG +F+YS+SV G + +TAYL ++QRGGL Q FG
Sbjct: 23 VAQTTADAALHAVFEKSGVSGDNFDYSKSVSKSTAGSLHTGAVTAYLQRMQRGGLTQSFG 82
Query: 98 CMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGL-IGIDARTLFTPPSGASLAKA 154
CM+AVEE FR+I YSEN E LDL ++ E+N L IG D RTLFTP S ASL KA
Sbjct: 83 CMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFTPSSAASLEKA 142
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
A ++EISLLNPI V+ S+ KP YAI HRID+GIVID E D +S GA+QS K
Sbjct: 143 AETQEISLLNPITVYCRSK---KPLYAIAHRIDIGIVIDFEAVNMNDVTISADGALQSHK 199
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQALPGGDIGLLCDTVVE+V++LTGYDRVM Y FH+D+HGEVV+EIRR+DLE
Sbjct: 200 LAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVAEIRRTDLE 259
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF +NRVRMI DC A P ++Q L+QP+ L STLRSPHG
Sbjct: 260 PYLGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPEKIVQDPNLRQPVSLAGSTLRSPHG 319
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIPFPLRYAC 385
CH QYM NMGSI+S+VMAVIIN + K WGLVVCHHTSPR +PFPLR AC
Sbjct: 320 CHAQYMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKQWGLVVCHHTSPRTVPFPLRSAC 379
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL+Q F LQL ME+++A QL EK+ILRTQ LLCDMLLRDAP IV+Q P+IMDLVKCDG
Sbjct: 380 EFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPTGIVSQVPNIMDLVKCDG 439
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALYYG R WL+G TPTESQ+KDIA WLL H D TGLSTDSLA+A YP A LLG AVCG
Sbjct: 440 AALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCG 499
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA A+ITSKDFLFWFRSHTAKE+KWGGAKH P KD+ KMHPRS FKAFLEVVK RS P
Sbjct: 500 MAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSPFKAFLEVVKRRSLP 559
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
WE E++AIHSLQ+++R SFQ++ +++D+K + + N K+ +DELS VA EMVRLIE
Sbjct: 560 WEDVEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLHDMDELSIVANEMVRLIE 618
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TATAPI VDS+G INGWNAK+A+ TGLP +EAMG+SL+ ++V +ES VE L+ AL
Sbjct: 619 TATAPILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEVVERLLYLALR 678
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
GEE++ VE+KL+ F Q V ++VNAC SRD NV GVCFVGQD+T +K+ MDKF
Sbjct: 679 GEEEQGVEIKLKTFGAQTVKGAVTLIVNACASRDVSENVVGVCFVGQDVTGQKMFMDKFT 738
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFG-- 803
R+QGDY+ I+Q+ +PLIPPIF +DE C EWN AME +TGW R EVIGK+L EIFG
Sbjct: 739 RIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKRDEVIGKLLVGEIFGMQ 798
Query: 804 -NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVI 862
C+MK QD +TKFMI L + GQ T+ F FF+R+G++V+ L+ ++RT+A+G +
Sbjct: 799 KMCCQMKSQDAMTKFMISLNSAMDGQNTDKFSLSFFDREGRYVDALLSTNKRTNADGAIT 858
Query: 863 GCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSI 922
G CF+QI +LQ AL Q + AK+KELAYIRQE+KNPL GI F +LLE + +
Sbjct: 859 GVICFLQIASSELQQALRVQQATEKVAIAKLKELAYIRQEIKNPLCGITFTRQLLEDTDL 918
Query: 923 SENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
S +Q+Q+L+TS CE+Q+ +++ +DL IE+G
Sbjct: 919 SNDQKQFLDTSAVCEQQLQKVLNDLDLESIEDG 951
>gi|297740631|emb|CBI30813.3| unnamed protein product [Vitis vinifera]
Length = 877
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/704 (76%), Positives = 614/704 (87%), Gaps = 2/704 (0%)
Query: 252 MLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVM 311
M+Y FHDDDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVR+ICDC+A V
Sbjct: 1 MVYKFHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNAKAVR 60
Query: 312 VIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHH 371
VIQS+ELKQPLCLVNSTLRSPHGCHLQYM NMG IASL MAV+IN D+ KLWGLVVCHH
Sbjct: 61 VIQSEELKQPLCLVNSTLRSPHGCHLQYMFNMGCIASLAMAVVINGNDATKLWGLVVCHH 120
Query: 372 TSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIV 431
TSPRY+PFPLRYACEFL+QAF LQLYMELQ+A QLAEK ILR Q LLCDMLLR+AP IV
Sbjct: 121 TSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCDMLLREAPLGIV 180
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
T SPSIMDL+KCDGAALYYGGRCWL+GVTPTESQ+KDIA WLL HGD TGLSTDSLA+A
Sbjct: 181 THSPSIMDLLKCDGAALYYGGRCWLLGVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADA 240
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAALLG AVCGMATARITSKDFL WFRSHTAKEVKWGGAKHHPE KD+GG+MHPRSS
Sbjct: 241 GYPGAALLGDAVCGMATARITSKDFLLWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSS 300
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVD 611
FKAFLEVVK+RS PWEVS+INAIHSLQ++MRDSFQ++E+ + KV +TQ+ S+MQG++
Sbjct: 301 FKAFLEVVKSRSLPWEVSDINAIHSLQLIMRDSFQDIEDSS-GKVMVHTQKYDSEMQGLN 359
Query: 612 ELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEE 671
EL SVACEMV+LIETATAPIFGVDSSG INGWNAK+AELTGL A EAMGKSL+DE+VHE+
Sbjct: 360 ELGSVACEMVKLIETATAPIFGVDSSGCINGWNAKIAELTGLQAKEAMGKSLVDEIVHED 419
Query: 672 SQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVG 731
+GAV+NL+CRAL G+EDKNVELKL+ F L +Q S +YI+VNACTSRDY N++ GVCFVG
Sbjct: 420 LRGAVDNLLCRALQGKEDKNVELKLKNFGLNQQDSALYIVVNACTSRDYTNDIVGVCFVG 479
Query: 732 QDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHE 791
QDIT EK++MDKFIRLQGDY+AI+Q +NPLIPPIFASD NACCSEWN ++EK+TG MRHE
Sbjct: 480 QDITSEKIVMDKFIRLQGDYKAIVQCLNPLIPPIFASDGNACCSEWNTSLEKLTGCMRHE 539
Query: 792 VIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
VI KMLP E+FG C +K QD LT+F ILLYQ I+GQ TE FPFGFF++ G+ VEV LTA
Sbjct: 540 VIRKMLPGEVFGGLCPLKSQDTLTRFTILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTA 599
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++RTDA G VIGCFCF+QI PD L G E + ++K KELAYIRQE+KNPLNGIR
Sbjct: 600 NKRTDANGNVIGCFCFLQIDTPDKHQGL-GHGPEYRECFSKFKELAYIRQEMKNPLNGIR 658
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F HKLLE+++ S Q+Q+LETS+ACERQ+M+II +D+ IEEG
Sbjct: 659 FTHKLLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEG 702
>gi|1125699|gb|AAC49128.1| phytochrome [Mesotaenium caldariorum]
gi|1587953|prf||2207374B phytochrome photoreceptor
Length = 1142
Score = 1145 bits (2961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/971 (57%), Positives = 709/971 (73%), Gaps = 35/971 (3%)
Query: 18 NTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISP----PE 73
+T+ S + K + + ADA L FE S A G SF+Y++SV + E
Sbjct: 2 STSRMSQSSGESTAKTKREVRVAQATADAKLNTAFEASAAVGGSFDYTKSVGASLNAGSE 61
Query: 74 GVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELN 132
+P +TAYL ++QRGG+ Q FGCML VEE +FR+ +SEN EMLDL ++
Sbjct: 62 AIPSSAVTAYLQRMQRGGITQTFGCMLMVEEGSFRVRAFSENAGEMLDLVPQAVPSMGQQ 121
Query: 133 GLI--GIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
LI G D RTLFT S + L KAA + ++S++NP+ + S R+ +KPF+A+LHRIDVG+
Sbjct: 122 SLIAVGTDIRTLFTSASVSLLEKAAMATDVSVMNPVSLQS--RAAKKPFFAVLHRIDVGL 179
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
V+DLEP + DP +S AGA+QS KLA AISRLQ+LPGGDIGLLCD VVE+V++LTGYDR
Sbjct: 180 VVDLEPVRPSDPNVSAAGAMQSHKLAAKAISRLQSLPGGDIGLLCDAVVEEVRELTGYDR 239
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQAARFLF +NRVR+ICDC A PV
Sbjct: 240 VMAYKFHEDEHGEVIAEIRRSDLEPYLGLHYPATDIPQAARFLFMKNRVRIICDCSAPPV 299
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
VIQ +K P+ L STLR HGCH QYM NMGS+ASLVMAVIIN S
Sbjct: 300 KVIQDPTMKHPISLAGSTLRGVHGCHAQYMANMGSVASLVMAVIINDNSSEEGATAAGGI 359
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
KLWGLVVCHH+SPRY+PFPLR ACEFL+Q F LQL ME++++ QL EK+ILRTQ
Sbjct: 360 LHKGRKLWGLVVCHHSSPRYVPFPLRSACEFLMQVFGLQLNMEVELSSQLREKHILRTQT 419
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDMLLRDAP IV+QSP+I DLVKCDGAAL+Y GR WL+GVTP+E+Q++DIA WLL++
Sbjct: 420 LLCDMLLRDAPMGIVSQSPNITDLVKCDGAALFYHGRAWLLGVTPSEAQVRDIAAWLLDS 479
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSLA+AGYP A LG +VCGMA ARITSKDFLFWFRSH KEVKW GAK
Sbjct: 480 HKDSTGLSTDSLADAGYPNADSLGVSVCGMAAARITSKDFLFWFRSHAQKEVKWAGAKQE 539
Query: 537 PEHKDN-----GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM--- 588
P +D GG+MHPRSSF+AFLEVVK RS PWE E++AIHSLQ+++R SFQ+M
Sbjct: 540 PGDRDREEGEEGGRMHPRSSFQAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSFQDMEGE 599
Query: 589 --EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
+ +K N + N K+QG+DELS+VA EMVRLIETATAPI VDS G +NGWNAK
Sbjct: 600 GGGSQQGNKRMINARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSLGCVNGWNAK 659
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKF--ELQKQ 704
V+ELTGLP SEAMGKSL+ ++V ES+ AVE ++ AL GEE++NVE++L+ + +L
Sbjct: 660 VSELTGLPVSEAMGKSLVKDLVQRESREAVERVLYMALNGEEEQNVEIQLKTWGPQLHSH 719
Query: 705 HSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPP 764
V ++VNAC SRD +V GVCFVGQD+T EK ++DKFIR+QGDY I++S N LIPP
Sbjct: 720 GGTVILVVNACASRDVSESVVGVCFVGQDVTGEKEVLDKFIRIQGDYTTIVRSRNSLIPP 779
Query: 765 IFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQG 824
IF SDE CC+EWN AMEK+TG R +VIG+ML ++FG+ R++G D LT+FMI+L +
Sbjct: 780 IFGSDEYGCCTEWNPAMEKLTGVRREDVIGRMLMGDVFGSALRLRGSDGLTQFMIVLNRA 839
Query: 825 ITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGL 884
+ G T+ FPF F++R+G+ V+ LTA++RTDA+G + G FCF+ + +LQ AL Q
Sbjct: 840 MDGADTDKFPFTFYDREGKCVDSLLTANKRTDADGAITGVFCFLHTVSLELQQALSVQKA 899
Query: 885 EDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTII 944
+ AK KELAYIRQE++NPL+GI F +E + +SE+Q+Q +ETS CE+Q+ I+
Sbjct: 900 AERVAEAKAKELAYIRQEIQNPLDGIHFARSFIEHTELSEDQKQLMETSATCEKQLRRIL 959
Query: 945 DGMDLRCIEEG 955
D MDL IEEG
Sbjct: 960 DDMDLESIEEG 970
>gi|548512|sp|P36505.1|PHY1_PHYPA RecName: Full=Phytochrome 1
gi|402606|emb|CAA52933.1| phytochrome [Physcomitrella patens]
Length = 1132
Score = 1140 bits (2948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/929 (60%), Positives = 697/929 (75%), Gaps = 19/929 (2%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVI-SPPEGVPEEQITAYLSKIQRGGLIQPFGCMLA 101
ADA L A FE+S SG SF+YS+SV S E +P +TAYL ++QRGGL Q FGCM+A
Sbjct: 27 TADAALQAVFEKSGDSGDSFDYSKSVSKSTAESLPSGAVTAYLQRMQRGGLTQSFGCMIA 86
Query: 102 VEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGL-IGIDARTLFTPPSGASLAKAAASR 158
VE FR+I YSEN E+LDL ++ E++ L IG D RTLFT S ASL KAA ++
Sbjct: 87 VEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASLEKAAEAQ 146
Query: 159 EISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVS 218
E+SLLNPI V N R K YAI HRID+GIVID E K+ D +S AGA+QS KLA
Sbjct: 147 EMSLLNPITV--NCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSHKLAAK 204
Query: 219 AISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLG 278
AI+RLQALPGG+IGLLCDTVVE+V++LTGYDRVM Y FH+D+HGEVV+EIRR+DLEPYLG
Sbjct: 205 AITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADLEPYLG 264
Query: 279 IHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQ 338
+H+P DIPQA+RFLF +N+VR+I DC A PV VIQ L+QP+ L STLRSPHGCH Q
Sbjct: 265 LHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPHGCHAQ 324
Query: 339 YMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
YM NMGSIASLVMAVIIN + KLWGLVVCHHTSPR +PFPLR AC FL+
Sbjct: 325 YMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACGFLM 384
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
Q F LQL ME++ A QL EK+ILRTQ LLCDMLLRDAP IV+Q P+IMDLVKCDGAALY
Sbjct: 385 QVFGLQLNMEVESAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCDGAALY 444
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YG WL+G TPTESQ+KDIA WLL H D TGLSTDSLA+A YP A LLG AVCGMA A
Sbjct: 445 YGKPFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMAAA 504
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
+IT+KDFLFWFRSHTAKE+KWGGAKH P +G KMHPRSSFKAFLEVVK RS PWE
Sbjct: 505 KITAKDFLFWFRSHTAKEIKWGGAKHDPGENHDGRKMHPRSSFKAFLEVVKRRSLPWEDV 564
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ ++D+K + + N K+ +DELS VA EMVRLIETATA
Sbjct: 565 EMDAIHSLQLILRGSFQDI-ADSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIETATA 623
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEED 689
PI VDS+G INGWNAK+A++TGLP SEA G+SL+ ++V +ES VE L+ AL GEE+
Sbjct: 624 PILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAVVERLLYLALRGEEE 683
Query: 690 KNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQG 749
+NVE+KL+ F Q + VV ++V+AC+S NV GVCFVGQD+T +K+ MDKF R+QG
Sbjct: 684 QNVEIKLKTFGTQTEKGVVILIVDACSSIHVSENVVGVCFVGQDVTGQKMFMDKFTRIQG 743
Query: 750 DYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFG---NFC 806
DY+ I+Q+ +PLIPPIF +DE C EWN AME +TGW + EV+GK+L EIFG C
Sbjct: 744 DYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGKLLVGEIFGMQMMCC 803
Query: 807 RMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFC 866
RMK QD +TKFMI L + GQ T+ F F FF+R+G++V+V L+ ++RT+A+G + G FC
Sbjct: 804 RMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTNKRTNADGVITGVFC 863
Query: 867 FMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQ 926
F+QI +LQ AL+ Q + AK+KELAYI +E+KNPL G+ F +LLE + +S++Q
Sbjct: 864 FLQIASSELQQALKVQRATEKVAVAKLKELAYIVREIKNPLCGLTFTRQLLEDTDLSDDQ 923
Query: 927 RQYLETSDACERQIMTIIDGMDLRCIEEG 955
+Q+L+TS CE+Q+ ++ MDL IE+G
Sbjct: 924 QQFLDTSAVCEQQLQKSLNDMDLESIEDG 952
>gi|6226671|sp|P42496.2|PHY_ADICA RecName: Full=Phytochrome 1
gi|3327373|dbj|BAA31710.1| phytochrome [Adiantum capillus-veneris]
gi|3337115|dbj|BAA31856.1| phytochrome 1 [Adiantum capillus-veneris]
Length = 1118
Score = 1134 bits (2934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/933 (58%), Positives = 705/933 (75%), Gaps = 27/933 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I +ADA L A +E+S SG SF+YS+SV + EG+ + +TAYL ++QRGGL+Q FGC
Sbjct: 22 IAQTSADAKLYAAYEESSESG-SFDYSQSVSAGKEGISSQLVTAYLQRMQRGGLVQQFGC 80
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRSEDF--ELNGL-IGIDARTLFTPPSGASLAKAA 155
++AVEE TFR++ Y N EMLD+ +++ + + L IG D RTL +P S ++L +
Sbjct: 81 LIAVEEETFRVLAYGANAPEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASASALDRVI 140
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
++S+ NPI V S RS KPFYAILHR DVG+VIDLEP + D +++ GA+QS KL
Sbjct: 141 GVVDVSMFNPITVQS--RSSGKPFYAILHRNDVGLVIDLEPIRPDDASIT-GGALQSHKL 197
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
A AI+RLQ+LPGGDIGLLCD+VVE+V +LTG+DRVM Y FH+D+HGEVV+EIRR+DLEP
Sbjct: 198 AAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRRTDLEP 257
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
Y+G+H+PA DIPQAARFLF +NRVRMICDC PV +IQ K L QP+ L S LR+PHGC
Sbjct: 258 YIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSKLRAPHGC 317
Query: 336 HLQYMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIPFPLRYACE 386
H QYM NM SI+SLVMAVI+N D +KLWGLVVCHHTSPRY+PFP+R ACE
Sbjct: 318 HTQYMANMNSISSLVMAVIVNDSDDDSPGHSSQGIKLWGLVVCHHTSPRYVPFPVRSACE 377
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+Q FSLQL ME+ +A Q+ EK+ILRTQ LLCDMLLRDAP IV+QSP+IMDLV CDGA
Sbjct: 378 FLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVTCDGA 437
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYYG +CWL+G TPTE+Q+ DIA WLL+ H D TGLSTDSLA+ GYP A+ LG AVCG+
Sbjct: 438 ALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLGDAVCGL 497
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A+IT+ DFLFWFRSHTAKEV+WGGA+H PE +D+G +MHPRSSFKAFLEVVK +S PW
Sbjct: 498 AAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVKQQSLPW 557
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
E E++AIHSLQ+++R SFQ++++ N +K + + N K+QG+DELS+VA EMVRLIET
Sbjct: 558 EDVEMDAIHSLQLILRGSFQDIDDSN-TKTMIHARLNDLKLQGLDELSTVASEMVRLIET 616
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
ATAPI VD G INGWN KVAELTGL AMGKSL E+VHEES+ VE ++ AL G
Sbjct: 617 ATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERVLHLALEG 676
Query: 687 EEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIR 746
EE++++E+ LR ++ KQ VV ++VN C SRD NNV GVCFVGQD+T +K+++D+FIR
Sbjct: 677 EEEQDIEIHLRTYDQHKQKGVVILIVNTCCSRDVSNNVVGVCFVGQDVTGQKLVLDRFIR 736
Query: 747 LQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFG--- 803
+QGDY+AI+QS+NPLIPPIF +DE CSEWNAAMEK++ W R EV+GKML EIFG
Sbjct: 737 IQGDYKAIVQSLNPLIPPIFGADEYGFCSEWNAAMEKLSNWRREEVLGKMLVGEIFGLQM 796
Query: 804 NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
CR++GQD++TK MI+L + GQ +E FP F++R G+ VE L AS+RTDA+G++ G
Sbjct: 797 VCCRLQGQDVVTKLMIVLNDAVNGQESEKFPLVFYDRNGRRVEALLIASKRTDADGRITG 856
Query: 864 CFCFMQILVPD-LQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSI 922
FCF+ P+ LQ + + E +D KEL+Y+++E+K PL G+ F +LE +++
Sbjct: 857 VFCFLHTASPELLQALIIKRAKEKVD-----KELSYVKEELKKPLEGLAFTRTVLEGTNL 911
Query: 923 SENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+ QRQ ++T+ CERQ+ I++ DL IEEG
Sbjct: 912 TIEQRQLIKTNAWCERQLRKILED-DLNNIEEG 943
>gi|740579|prf||2005378A phytochrome
Length = 1117
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/933 (58%), Positives = 705/933 (75%), Gaps = 28/933 (3%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I +A+A L A +E+S SG SF+YS+SV + EG+ + +TAYL ++QRGGL+Q FGC
Sbjct: 22 IAQTSANAKLYAAYEESSESG-SFDYSQSVSAGKEGISSQLVTAYLQRMQRGGLVQQFGC 80
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRSEDF--ELNGL-IGIDARTLFTPPSGASLAKAA 155
++AVEE TFR++ E EMLD+ +++ + + L IG D RTL +P S ++L +
Sbjct: 81 LIAVEEETFRVLHMCE-APEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASASALDRVI 139
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
++S+ NPI V S RS KPFYAILHR DVG+VIDLEP + D +++ GA+QS KL
Sbjct: 140 GVVDVSMFNPITVQS--RSSGKPFYAILHRNDVGLVIDLEPIRPDDASIT-GGALQSHKL 196
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
A AI+RLQ+LPGGDIGLLCD+VVE+V +LTG+DRVM Y FH+D+HGEVV+EIRR+DLEP
Sbjct: 197 AAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRRTDLEP 256
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
Y+G+H+PA DIPQAARFLF +NRVRMICDC PV +IQ K L QP+ L STLR+PHGC
Sbjct: 257 YIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSTLRAPHGC 316
Query: 336 HLQYMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIPFPLRYACE 386
H QYM NM SI+SLVMAVI+N D +KLWGLVVCHHTSPRY+PFP+R ACE
Sbjct: 317 HTQYMANMNSISSLVMAVIVNDSDDDSAGHSSQGIKLWGLVVCHHTSPRYVPFPVRSACE 376
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+Q FSLQL ME+ +A Q+ EK+ILRTQ LLCDMLLRDAP IV+QSP+IMDLV CDGA
Sbjct: 377 FLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVTCDGA 436
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYYG +CWL+G TPTE+Q+ DIA WLL+ H D TGLSTDSLA+ GYP A+ LG AVCG+
Sbjct: 437 ALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLGDAVCGL 496
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A+IT+ DFLFWFRSHTAKEV+WGGA+H PE +D+G +MHPRSSFKAFLEVVK +S PW
Sbjct: 497 AAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVKQQSLPW 556
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
E E++AIHSLQ+++R SFQ++++ N +K + + N K+QG+DELS+VA EMVRLIET
Sbjct: 557 EDVEMDAIHSLQLILRGSFQDIDDSN-TKTMIHARLNDLKLQGLDELSTVASEMVRLIET 615
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
ATAPI VD G INGWN KVAELTGL AMGKSL E+VHEES+ VE ++ AL G
Sbjct: 616 ATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERVLHLALEG 675
Query: 687 EEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIR 746
EE++++E+ LR ++ KQ VV ++VN C SRD NNV GVCFVGQD+T +K+++D+FIR
Sbjct: 676 EEEQDIEIHLRTYDQHKQKGVVILIVNTCCSRDVSNNVVGVCFVGQDVTGQKLVLDRFIR 735
Query: 747 LQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFG--- 803
+QGDY+AI+QS+NPLIPPIF +DE CSEWNAAMEK++ W R EV+GKML EIFG
Sbjct: 736 IQGDYKAIVQSLNPLIPPIFGADEYGFCSEWNAAMEKLSNWRREEVLGKMLVGEIFGLQM 795
Query: 804 NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
CR++GQD++TK MI+L + GQ +E FP F++R G+ VE L AS+RTDA+G++ G
Sbjct: 796 VCCRLQGQDVVTKLMIVLNDAVNGQESEKFPLVFYDRNGRRVEALLIASKRTDADGRITG 855
Query: 864 CFCFMQILVPD-LQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSI 922
FCF+ P+ LQ + + E +D KEL+Y+++E+K PL G+ F +LE +++
Sbjct: 856 VFCFLHTASPELLQALIIKRAKEKVD-----KELSYVKEELKKPLEGLAFTRTVLEGTNL 910
Query: 923 SENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+ QRQ ++T+ CERQ+ I++ DL IEEG
Sbjct: 911 TIEQRQLIKTNAWCERQLRKILED-DLNNIEEG 942
>gi|77963962|gb|ABB13323.1| phytochrome B [Hordeum vulgare subsp. vulgare]
gi|77963964|gb|ABB13324.1| phytochrome B [Hordeum vulgare subsp. vulgare]
gi|77963966|gb|ABB13325.1| phytochrome B [Hordeum vulgare subsp. vulgare]
Length = 814
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/814 (66%), Positives = 646/814 (79%), Gaps = 26/814 (3%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DAGL A FEQS ASG+SF+YS+S+++PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 2 VAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 61
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P SG
Sbjct: 62 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSPSSGVL 121
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 122 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 179
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FHDD+HGEV++E RR
Sbjct: 180 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAESRR 239
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
DLEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA V VIQ + QPLCLV STLR
Sbjct: 240 GDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGSTLR 299
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 300 SPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSPRCI 359
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 360 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 419
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAAL+Y G+ + +GVTPTE+Q+KDI WL HGD TGLSTDSLA+AGYPGA
Sbjct: 420 MDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYPGAT 479
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 480 ALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 539
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEM-EEENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 540 VVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGIDELS 599
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSLI +++ +ES+
Sbjct: 600 SVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKDLIFKESEE 659
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
VE L+ +AL GEE NVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQDI
Sbjct: 660 IVEKLLSQALRGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDI 719
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKF+ +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AME +TGW R EV+G
Sbjct: 720 TGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMENLTGWSRGEVVG 779
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQ 828
K+L E+FGN CR+KG D LTKFMI L+ I GQ
Sbjct: 780 KLLVGEVFGNCCRLKGPDALTKFMIALHNAIGGQ 813
>gi|2499556|sp|Q40762.1|PHY_PICAB RecName: Full=Phytochrome
gi|1399958|gb|AAB03339.1| phytochrome [Picea abies]
Length = 1136
Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/950 (58%), Positives = 696/950 (73%), Gaps = 39/950 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEG--VPEEQITAYLSKIQRGGLIQP 95
+I DA L AEFE SV SF+Y++S+ + VP E + AYL ++Q+ LIQP
Sbjct: 28 VITQTPVDAKLQAEFEGSV---HSFDYTKSIDISGDSSSVPSETVKAYLQRLQKEMLIQP 84
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--------------IGIDART 141
FGC+LAVEE + ++GYSEN EMLD+ + G IG+DART
Sbjct: 85 FGCVLAVEEGSCAVVGYSENAPEMLDVVGGAHAVPSIGGQQQEGGGGGGGLLRIGMDART 144
Query: 142 LFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGD 201
LF P S A+L KAA ++ L+NPI V N KPFYAIL+RID G+VID EP D
Sbjct: 145 LFKPASAAALQKAATFADMHLVNPIFVRCNRSG--KPFYAILNRIDAGLVIDFEPVMPSD 202
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
+S AGA+QS KLA AISRLQ+LPGGDI LLCDTVV++V++LTGYDRVM Y FH+D+H
Sbjct: 203 VPVSAAGALQSYKLAAKAISRLQSLPGGDIRLLCDTVVQEVRELTGYDRVMAYRFHEDEH 262
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E+RR DLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC A PV VIQ K L+QP
Sbjct: 263 GEVVAEMRRPDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCCAPPVNVIQDKRLRQP 322
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVV 368
L L STLR+PHGCH QYM NMGSIASLVM+V N ++ KLWGLVV
Sbjct: 323 LSLCGSTLRAPHGCHAQYMANMGSIASLVMSVTTNENGDDSEGGGQQQPQNRRKLWGLVV 382
Query: 369 CHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPF 428
CHHTSPR IPFPLRYACEFL+Q F +QL E+++A QL EK+ILR Q +LCDMLLRDAP
Sbjct: 383 CHHTSPRVIPFPLRYACEFLMQVFGIQLNKEVELAAQLREKHILRVQPVLCDMLLRDAPV 442
Query: 429 SIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSL 488
IV+Q+P+IMDLVKCDGAAL YG R WL+G TPTE+Q+ DIA WLL +H D TGLSTDSL
Sbjct: 443 GIVSQTPNIMDLVKCDGAALLYGKRLWLLGTTPTEAQILDIADWLLEHHRDSTGLSTDSL 502
Query: 489 AEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHP 548
AEAGYPGAA LG AVCG+A ARITSKDFLFWFRSHTAKE+ WGGAKH P KD+G +MHP
Sbjct: 503 AEAGYPGAASLGDAVCGIAAARITSKDFLFWFRSHTAKEIIWGGAKHDPNDKDDGRRMHP 562
Query: 549 RSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQ 608
RSSFKAFLEVVK RS PWE E++AIHSLQ+++RDSF ++ +++DSK + + N ++Q
Sbjct: 563 RSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRDSFHDI-DDSDSKTMIHARLNDLRLQ 621
Query: 609 GVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVV 668
G+DELS+V EMVRLIETAT PI +DS+G +NGWN K AELTGL A E +G+ LID V
Sbjct: 622 GIDELSAVTNEMVRLIETATVPILAIDSNGLVNGWNTKAAELTGLLADEVIGRPLIDLVQ 681
Query: 669 HEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVC 728
H+ + V+ ++ AL GEE++NVE+KL+ F +Q++ V ++VNAC+SRD + NV GVC
Sbjct: 682 HDSVE-IVKKMLYLALQGEEEQNVEIKLKTFGIQEEKGPVVLIVNACSSRDLEENVVGVC 740
Query: 729 FVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWM 788
FV QD+T +++ MDKF LQGDY AI+Q+ NPLIPPIF +DE CSEWN AMEK+TGW
Sbjct: 741 FVAQDVTWQRIAMDKFTHLQGDYRAIVQNPNPLIPPIFGADEYGYCSEWNPAMEKLTGWK 800
Query: 789 RHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFV 845
R EVIGKML E+FG C++KGQD LTK I+L + G+ TE FPF FF+R G+
Sbjct: 801 REEVIGKMLVGEVFGIHRMSCQLKGQDGLTKLRIVLNNAMAGKETEKFPFSFFDRHGKNT 860
Query: 846 EVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKN 905
E L+A++RTDAEG + G FCF+ + +LQ AL+ Q + + ++KELAYIRQE++N
Sbjct: 861 EALLSANKRTDAEGIITGVFCFLHVTSTELQQALQVQRMAEQAAMDRLKELAYIRQEIRN 920
Query: 906 PLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
PL GI F KL+ES+ +SE Q+Q ++TS C+RQ++ ++D DL IE+G
Sbjct: 921 PLYGIIFTRKLMESTDLSEEQKQIVQTSALCQRQLVKVLDDADLESIEDG 970
>gi|156753023|gb|ABU94257.1| phytochrome P [Pinus sylvestris]
gi|156753027|gb|ABU94259.1| phytochrome P [Pinus sylvestris]
gi|156753029|gb|ABU94260.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/727 (71%), Positives = 605/727 (83%), Gaps = 14/727 (1%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID
Sbjct: 14 IGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVID 70
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD +S AGAVQSQKLAV AISRLQ+LP GD+GLLCDTVVE+V++LTGYDRVM+
Sbjct: 71 LEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMV 130
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 131 YKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVI 190
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLW 364
QS+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D SMKLW
Sbjct: 191 QSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGGGSGRNSMKLW 250
Query: 365 GLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLR 424
GLVVCHHTSPR +PFPLRYACEFL+QA LQL MELQ+A QL EK+ILRTQ LLCDMLLR
Sbjct: 251 GLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 310
Query: 425 DAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLS 484
DAP IVTQSPSIMDLVKCDGAALYYGG CWL+GVTPTE+Q+KDIA WLL +HGD TGLS
Sbjct: 311 DAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPTEAQIKDIADWLLEHHGDSTGLS 370
Query: 485 TDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGG 544
TDSLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+
Sbjct: 371 TDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDAR 430
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNG 604
+MHPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N
Sbjct: 431 RMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLND 489
Query: 605 SKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLI 664
++QG+DELSSVA EMVRLIETATAPI VD +G +NGWNAKVAELTGLP EAMG SL+
Sbjct: 490 LRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLV 549
Query: 665 DEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNV 724
++V E+S VE ++ AL GEE+KNVE+ L+ F QK+ V ++VNAC+SRD+ +N+
Sbjct: 550 QDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNI 609
Query: 725 KGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKV 784
GVCFVGQD+T +KV+MDKFIR+QGDY +I+QS NPLIPPIFASDE ACCSEWNAAMEKV
Sbjct: 610 VGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAMEKV 669
Query: 785 TGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQF 844
TGW EVIGKML EIFG CR+KGQD +TKF I+L+ I GQ E FPF FF++QG++
Sbjct: 670 TGWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHSAIDGQEIEKFPFAFFDKQGKY 729
Query: 845 VEVALTA 851
VE LTA
Sbjct: 730 VEALLTA 736
>gi|156752995|gb|ABU94243.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/727 (71%), Positives = 605/727 (83%), Gaps = 14/727 (1%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID
Sbjct: 14 IGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVID 70
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD +S AGAVQSQKLAV AISRLQ+LP GD+GLLCDTVVE+V++LTGYDRVM+
Sbjct: 71 LEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMV 130
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 131 YKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVI 190
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLW 364
QS+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D SMKLW
Sbjct: 191 QSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGGGSGRNSMKLW 250
Query: 365 GLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLR 424
GLVVCHHTSPR +PFPLRYACEFL+QA LQL MELQ+A QL EK+ILRTQ LLCDMLLR
Sbjct: 251 GLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 310
Query: 425 DAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLS 484
DAP IVTQSPSI DLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLS
Sbjct: 311 DAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLS 370
Query: 485 TDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGG 544
TDSLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+
Sbjct: 371 TDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDAR 430
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNG 604
+MHPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SF+++++ +K +++ N
Sbjct: 431 RMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDIDDSG-TKTMVHSRLND 489
Query: 605 SKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLI 664
++QG+DELSSVA EMVRLIETATAPI VD +G +NGWNAKVAELTGLP +EAMG SL+
Sbjct: 490 LRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVAEAMGMSLV 549
Query: 665 DEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNV 724
++V E+S VE ++ AL GEE+KNVE+ L+ F QK+ V ++VNAC+SRD+ +N+
Sbjct: 550 QDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNI 609
Query: 725 KGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKV 784
GVCFVGQD+T +KV+MDKFIR+QGDY +I+QS NPLIPPIFASDE ACCSEWNAAMEKV
Sbjct: 610 VGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAMEKV 669
Query: 785 TGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQF 844
TGW EVIGKML EIFG CR+KGQD +TKF I+L+ I GQ E FPF FF++QG++
Sbjct: 670 TGWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHSAIDGQEIEKFPFAFFDKQGKY 729
Query: 845 VEVALTA 851
VE LTA
Sbjct: 730 VEALLTA 736
>gi|156752953|gb|ABU94222.1| phytochrome P [Pinus sylvestris]
gi|156752955|gb|ABU94223.1| phytochrome P [Pinus sylvestris]
gi|156752957|gb|ABU94224.1| phytochrome P [Pinus sylvestris]
gi|156752959|gb|ABU94225.1| phytochrome P [Pinus sylvestris]
gi|156752961|gb|ABU94226.1| phytochrome P [Pinus sylvestris]
gi|156752963|gb|ABU94227.1| phytochrome P [Pinus sylvestris]
gi|156752965|gb|ABU94228.1| phytochrome P [Pinus sylvestris]
gi|156752967|gb|ABU94229.1| phytochrome P [Pinus sylvestris]
gi|156752969|gb|ABU94230.1| phytochrome P [Pinus sylvestris]
gi|156752971|gb|ABU94231.1| phytochrome P [Pinus sylvestris]
gi|156752973|gb|ABU94232.1| phytochrome P [Pinus sylvestris]
gi|156752975|gb|ABU94233.1| phytochrome P [Pinus sylvestris]
gi|156752977|gb|ABU94234.1| phytochrome P [Pinus sylvestris]
gi|156752979|gb|ABU94235.1| phytochrome P [Pinus sylvestris]
gi|156752981|gb|ABU94236.1| phytochrome P [Pinus sylvestris]
gi|156752983|gb|ABU94237.1| phytochrome P [Pinus sylvestris]
gi|156752985|gb|ABU94238.1| phytochrome P [Pinus sylvestris]
gi|156752987|gb|ABU94239.1| phytochrome P [Pinus sylvestris]
gi|156752989|gb|ABU94240.1| phytochrome P [Pinus sylvestris]
gi|156752991|gb|ABU94241.1| phytochrome P [Pinus sylvestris]
gi|156752993|gb|ABU94242.1| phytochrome P [Pinus sylvestris]
gi|156752997|gb|ABU94244.1| phytochrome P [Pinus sylvestris]
gi|156752999|gb|ABU94245.1| phytochrome P [Pinus sylvestris]
gi|156753001|gb|ABU94246.1| phytochrome P [Pinus sylvestris]
gi|156753003|gb|ABU94247.1| phytochrome P [Pinus sylvestris]
gi|156753005|gb|ABU94248.1| phytochrome P [Pinus sylvestris]
gi|156753007|gb|ABU94249.1| phytochrome P [Pinus sylvestris]
gi|156753009|gb|ABU94250.1| phytochrome P [Pinus sylvestris]
gi|156753011|gb|ABU94251.1| phytochrome P [Pinus sylvestris]
gi|156753013|gb|ABU94252.1| phytochrome P [Pinus sylvestris]
gi|156753015|gb|ABU94253.1| phytochrome P [Pinus sylvestris]
gi|156753017|gb|ABU94254.1| phytochrome P [Pinus sylvestris]
gi|156753019|gb|ABU94255.1| phytochrome P [Pinus sylvestris]
gi|156753021|gb|ABU94256.1| phytochrome P [Pinus sylvestris]
gi|156753025|gb|ABU94258.1| phytochrome P [Pinus sylvestris]
gi|156753031|gb|ABU94261.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/727 (71%), Positives = 604/727 (83%), Gaps = 14/727 (1%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID
Sbjct: 14 IGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVID 70
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD +S AGAVQSQKLAV AISRLQ+LP GD+GLLCDTVVE+V++LTGYDRVM+
Sbjct: 71 LEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMV 130
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 131 YKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVI 190
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLW 364
QS+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D SMKLW
Sbjct: 191 QSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGGGSGRNSMKLW 250
Query: 365 GLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLR 424
GLVVCHHTSPR +PFPLRYACEFL+QA LQL MELQ+A QL EK+ILRTQ LLCDMLLR
Sbjct: 251 GLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 310
Query: 425 DAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLS 484
DAP IVTQSPSI DLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLS
Sbjct: 311 DAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLS 370
Query: 485 TDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGG 544
TDSLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+
Sbjct: 371 TDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDAR 430
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNG 604
+MHPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SF+++++ +K +++ N
Sbjct: 431 RMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDIDDSG-TKTMVHSRLND 489
Query: 605 SKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLI 664
++QG+DELSSVA EMVRLIETATAPI VD +G +NGWNAKVAELTGLP EAMG SL+
Sbjct: 490 LRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLV 549
Query: 665 DEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNV 724
++V E+S VE ++ AL GEE+KNVE+ L+ F QK+ V ++VNAC+SRD+ +N+
Sbjct: 550 QDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNI 609
Query: 725 KGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKV 784
GVCFVGQD+T +KV+MDKFIR+QGDY +I+QS NPLIPPIFASDE ACCSEWNAAMEKV
Sbjct: 610 VGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAMEKV 669
Query: 785 TGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQF 844
TGW EVIGKML EIFG CR+KGQD +TKF I+L+ I GQ E FPF FF++QG++
Sbjct: 670 TGWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHSAIDGQEIEKFPFAFFDKQGKY 729
Query: 845 VEVALTA 851
VE LTA
Sbjct: 730 VEALLTA 736
>gi|183239026|gb|ACC60971.1| phytochrome C [Vitis riparia]
Length = 1123
Score = 1063 bits (2748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/957 (54%), Positives = 682/957 (71%), Gaps = 29/957 (3%)
Query: 17 HNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPE 73
+ T +SS A+ K G ++ DA L FE+S + F+YS S+ IS
Sbjct: 7 NKTNCSRSSSARSK---HGARVVAQTPIDAQLHVNFEES---ERHFDYSASIDFNISSST 60
Query: 74 G-VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDF 129
G VP ++AYL K+QRG LIQPFGCM+AV+E ++ YSEN EMLDL S +
Sbjct: 61 GDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQ 120
Query: 130 ELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
+ IG D RTLF A+L KAA E++LLNPILVH R+ KPFYAILHRIDVG
Sbjct: 121 QEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHC--RNSGKPFYAILHRIDVG 178
Query: 190 IVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYD 249
++IDLEP D ++ AGA++S KLA AISRLQ+LP G+I LLCD +V++ +LTGYD
Sbjct: 179 LIIDLEPVNPADVPITAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYD 238
Query: 250 RVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIP 309
RVM+Y FH+D+HGEV++E R+ DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A P
Sbjct: 239 RVMVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPP 298
Query: 310 VMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS--------- 360
V VIQ+K L QPL L STLRSPHGCH QYM NMGS+ASLVM+V IN +D
Sbjct: 299 VKVIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESEQQKG 358
Query: 361 MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCD 420
KLWGLVVCH+TSPR++PFPLRYACEFLVQ F +Q+ E+++A Q+ EK+IL+TQ +LCD
Sbjct: 359 RKLWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCD 418
Query: 421 MLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDC 480
MLLRDAP IVTQSP++MDLV+CDGAALYY + WL+GVTPTE+Q++DI WLL H
Sbjct: 419 MLLRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEYHSGS 478
Query: 481 TGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHK 540
TGLSTDSL EAGYP A +LG AVCG+A +I S DFLFWFRSHTAKE+KWGGAKH P+ K
Sbjct: 479 TGLSTDSLMEAGYPAALVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDK 538
Query: 541 DNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNT 600
D+G KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S Q+ + +DSK+ N
Sbjct: 539 DDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQD-KSADDSKMIVNV 597
Query: 601 QQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMG 660
+ ++ D+L V EMVRLIETA+ PI VD++G INGWN K AELTGL +A+G
Sbjct: 598 PSVDASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIG 657
Query: 661 KSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDY 720
LID +V +S V+ ++ AL G E++NVE+KL+ F Q+ + V ++VNAC SRD
Sbjct: 658 MPLID-LVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACCSRDI 716
Query: 721 KNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAA 780
K+NV GVCFVGQDIT +K++MDK+ R+QGDY I+++ + LIPPIF DE+ C EWN A
Sbjct: 717 KDNVVGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLEWNDA 776
Query: 781 MEKVTGWMRHEVIGKMLPREIF--GNF-CRMKGQDMLTKFMILLYQGITGQGTENFPFGF 837
M+ ++G R E +ML E+F NF C++K D LTK ILL I GQ + FGF
Sbjct: 777 MQNLSGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKLLFGF 836
Query: 838 FNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELA 897
F++ G+++E L+A++RTDAEGK+ G CF+ + P+LQ A++ Q + + +K+LA
Sbjct: 837 FDQHGKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSLKKLA 896
Query: 898 YIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
YIRQ+++ PLNGI F+ L++SS +S++Q+++L TS C+ Q+ I+D DL IEE
Sbjct: 897 YIRQQIRKPLNGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIEE 953
>gi|283131697|dbj|BAI63255.1| phytochrome E [Pieris nana]
Length = 657
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/655 (77%), Positives = 571/655 (87%), Gaps = 7/655 (1%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELN---GLIGIDARTLFTPPSGA 149
IQPFGCMLA+EEP+F+IIGYSENC +L L + + FE N GLIGIDARTLF+P SG
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFILLGL-NLNNVFESNQERGLIGIDARTLFSPSSGV 124
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP +SGDPALSLAGA
Sbjct: 125 SLVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGA 182
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 183 VQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIR 242
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTL
Sbjct: 243 STDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTL 302
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+
Sbjct: 303 RAPHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLM 362
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+
Sbjct: 363 QAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALF 422
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
Y G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGM TA
Sbjct: 423 YCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTA 482
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+S
Sbjct: 483 RITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEIS 542
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EINAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+A
Sbjct: 543 EINAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASA 601
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
PIFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 602 PIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131681|dbj|BAI63247.1| phytochrome E [Pieris nana]
gi|283131757|dbj|BAI63238.1| phytochrome E [Pieris nana]
Length = 657
Score = 1055 bits (2727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/654 (77%), Positives = 571/654 (87%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+P SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSPSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|73760088|dbj|BAE20162.1| phytochrome [Mougeotia scalaris]
gi|73760098|dbj|BAE20167.1| phytochrome [Mougeotia scalaris]
Length = 1124
Score = 1054 bits (2725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/934 (56%), Positives = 678/934 (72%), Gaps = 21/934 (2%)
Query: 39 IDHYNADAGLLAEFE-QSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
+ +ADA L FE S + G SF+Y++SV ++P E + + +TAYL ++QRG +IQ
Sbjct: 23 VTQASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRGSIIQ 82
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGL-IGIDARTLFTPPSGASL 151
FGCM+AVE TFRII YSEN EML + +S + N + IG D R+L +P S + +
Sbjct: 83 SFGCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPTGDQQNAIGIGTDVRSLLSPSSVSVV 142
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEP-SKSGDPALSLAGAV 210
KA A+ ++S++NPI V+S + +KPF+AILH DVG+VIDLEP S S D A+ AGAV
Sbjct: 143 EKAVAANDVSMMNPITVYS--LATQKPFFAILHMNDVGLVIDLEPISSSSDSAMFSAGAV 200
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QS KLA AISRLQ+LPGGDI LCD VVE+V++LTGYDRVM Y FHDD+HGEVV+EIRR
Sbjct: 201 QSHKLAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRR 260
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF +NR+RMICDC + V V+Q + Q + L ST+R
Sbjct: 261 SDLEPYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGSTMR 320
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSM---------KLWGLVVCHHTSPRYIPFPL 381
HGCH QYM NMGS ASLVM+V IN + + KLWGL+VCHH++PR+IPFP+
Sbjct: 321 GVHGCHTQYMMNMGSTASLVMSVTINDTNEIAGGPGMKGRKLWGLIVCHHSTPRHIPFPI 380
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q F LQL ME+++A Q EK+ILRTQ LLCDMLLRDAP IV+QSP++MDLV
Sbjct: 381 RSACEFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMDLV 440
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAAL +GGRCWL+G++PT+ Q+KDIA WL+++H D TGLSTDSL +AGYP A LG
Sbjct: 441 KCDGAALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKARELGV 500
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
VCGMA ARIT DFLFWFR H KEVKW GAK +D G +MHPRSSFKAFLEVVK
Sbjct: 501 DVCGMAAARITENDFLFWFRGHAQKEVKWAGAKDGGSEED-GSRMHPRSSFKAFLEVVKQ 559
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PWE E++AIHSLQ+++R SFQ++E++ D K+ + + +QG++ELSSVA EMV
Sbjct: 560 RSLPWEDVEMDAIHSLQLILRGSFQDIEDKEDRKIV-HARLKEMHLQGMEELSSVASEMV 618
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETATAPI VD++G +NGWN K++ELTGL E MGKSL+ ++ H S+ VE L+
Sbjct: 619 RLIETATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLLY 678
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLM 741
AL GEE++NVE++L+ + +Q+ V ++VNAC SRD V GVCFV QD+T EK++
Sbjct: 679 MALNGEEEQNVEIRLKTWGMQQGKGPVILMVNACASRDVSEKVVGVCFVAQDVTGEKIVQ 738
Query: 742 DKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREI 801
DKF R+QGDY I++S N LIPPIF SDE+ C EWN AME+++G R E IGKML RE+
Sbjct: 739 DKFTRIQGDYTTIVRSHNSLIPPIFGSDESGFCVEWNPAMERLSGVKREEAIGKMLTREL 798
Query: 802 FGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKV 861
FG R+K D LTKFMI+L ++ T+ FPF F++R G+ VEV LT S+R ++EG V
Sbjct: 799 FGGILRLKNVDGLTKFMIVLNAAMSSHDTDKFPFTFYDRSGKIVEVLLTTSKRCNSEGVV 858
Query: 862 IGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSS 921
G FCF+ +LQ AL Q + K KELAYIRQE++NPL+GI F +E +
Sbjct: 859 TGVFCFLHTASSELQQALTVQKAAERVAEVKAKELAYIRQEIQNPLDGIHFARSFMEHTV 918
Query: 922 ISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+SE+Q+Q +ETS CE+Q+ I+ MDL IE+G
Sbjct: 919 LSEDQKQLIETSATCEKQLRRILADMDLASIEKG 952
>gi|283131691|dbj|BAI63252.1| phytochrome E [Pieris nana]
Length = 657
Score = 1053 bits (2722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/654 (76%), Positives = 569/654 (87%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLEEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+P SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSPSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNDNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF FLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNTFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|183239018|gb|ACC60967.1| phytochrome C [Vitis vinifera]
Length = 1118
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/957 (54%), Positives = 682/957 (71%), Gaps = 29/957 (3%)
Query: 17 HNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPP 72
+ T +SS A+ K G ++ DA L FE+S + F+YS SV S
Sbjct: 7 NKTNCSRSSSARSK---HGARVVAQTPIDAQLHVNFEES---ERHFDYSASVDFNISSST 60
Query: 73 EGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDF 129
VP ++AYL K+QRG LIQPFGCM+AV+E ++ YSEN EMLDL S +
Sbjct: 61 SDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQ 120
Query: 130 ELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
+ IG D RTLF A+L KAA E++LLNPILVH R+ KPFYAILHRIDVG
Sbjct: 121 QEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHC--RNSGKPFYAILHRIDVG 178
Query: 190 IVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYD 249
++IDLEP D ++ AGA++S KLA AISRLQ+LP G+I LLCD +V++ +LTGYD
Sbjct: 179 LIIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYD 238
Query: 250 RVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIP 309
RVM+Y FH+D+HGEV++E R+ DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A P
Sbjct: 239 RVMVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPP 298
Query: 310 VMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS--------- 360
V VIQ+K L QPL L STLRSPHGCH QYM NMGS+ASLVM+V IN +D
Sbjct: 299 VKVIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESKQQKG 358
Query: 361 MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCD 420
KLWGLVVCH+TSPR++PFPLRYACEFLVQ F +Q+ E+++A Q+ EK+IL+TQ +LCD
Sbjct: 359 RKLWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCD 418
Query: 421 MLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDC 480
MLLRDAP IVTQSP++MDLV+CDGAALYY + WL+GVTPTE+Q++DI WLL +H
Sbjct: 419 MLLRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEHHSGS 478
Query: 481 TGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHK 540
TGLSTDSL EAGYP A++LG AVCG+A +I S DFLFWFRSHTAKE+KWGGAKH P+ K
Sbjct: 479 TGLSTDSLMEAGYPAASVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDK 538
Query: 541 DNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNT 600
D+G KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S Q+ + +DSK+ N
Sbjct: 539 DDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQD-KSADDSKMIVNV 597
Query: 601 QQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMG 660
+ ++ D+L V EMVRLIETA+ PI VD++G INGWN K AELTGL +A+G
Sbjct: 598 PSVDASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIG 657
Query: 661 KSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDY 720
LI+ +V +S V+ ++ AL G E++NVE+KL+ F Q+ + V ++VNAC SRD
Sbjct: 658 MPLIN-LVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACCSRDI 716
Query: 721 KNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAA 780
K+NV GVCFVGQDIT +K++MDK+ R+QGDY I+++ + LIPPIF DE+ C EWN A
Sbjct: 717 KDNVVGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLEWNDA 776
Query: 781 MEKVTGWMRHEVIGKMLPREIF--GNF-CRMKGQDMLTKFMILLYQGITGQGTENFPFGF 837
M+ ++G R E +ML E+F NF C++K D LTK ILL I GQ + FGF
Sbjct: 777 MQNLSGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKLLFGF 836
Query: 838 FNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELA 897
F++ G+++E L+A++RTDAEGK+ G CF+ + P+LQ A++ Q + + +K+LA
Sbjct: 837 FDQHGKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSLKKLA 896
Query: 898 YIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
YIRQ+++ P+NGI F+ L++SS +S++Q+++L TS C+ Q+ I+D DL IEE
Sbjct: 897 YIRQQIRKPINGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIEE 953
>gi|283131701|dbj|BAI63257.1| phytochrome E [Pieris nana]
Length = 657
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/655 (77%), Positives = 571/655 (87%), Gaps = 7/655 (1%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELN---GLIGIDARTLFTPPSGA 149
IQPFGCMLA+EEP+F+IIGYSENC +L L + FE N GLIGIDARTLF+P SG
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNV-FESNQERGLIGIDARTLFSPSSGV 124
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP +SGDPALSLAGA
Sbjct: 125 SLVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGA 182
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 183 VQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIR 242
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTL
Sbjct: 243 STDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTL 302
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+
Sbjct: 303 RAPHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLM 362
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+
Sbjct: 363 QAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALF 422
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
Y G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATA
Sbjct: 423 YCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATA 482
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+S
Sbjct: 483 RITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEIS 542
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EINAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+A
Sbjct: 543 EINAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASA 601
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
PIFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 602 PIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131761|dbj|BAI63236.1| phytochrome E [Pieris nana]
Length = 657
Score = 1052 bits (2720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/654 (76%), Positives = 570/654 (87%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+P SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSPSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LP GDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131709|dbj|BAI63241.1| phytochrome E [Pieris nana]
Length = 657
Score = 1051 bits (2719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/655 (77%), Positives = 571/655 (87%), Gaps = 7/655 (1%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELN---GLIGIDARTLFTPPSGA 149
IQPFGCMLA+EEP+F+IIGYSENC +L L + FE N GLIGIDARTLF+P SG
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNV-FESNQERGLIGIDARTLFSPSSGV 124
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGA
Sbjct: 125 SLVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGA 182
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 183 VQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIR 242
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTL
Sbjct: 243 STDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTL 302
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+
Sbjct: 303 RAPHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLM 362
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+
Sbjct: 363 QAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALF 422
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
Y G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATA
Sbjct: 423 YCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATA 482
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+S
Sbjct: 483 RITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEIS 542
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EINAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+A
Sbjct: 543 EINAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASA 601
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
PIFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S G VENL+CRA
Sbjct: 602 PIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSCGVVENLMCRAF 656
>gi|283131699|dbj|BAI63256.1| phytochrome E [Pieris nana]
Length = 657
Score = 1051 bits (2719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/655 (77%), Positives = 571/655 (87%), Gaps = 7/655 (1%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELN---GLIGIDARTLFTPPSGA 149
IQPFGCMLA+EEP+F+IIGYSENC +L L + FE N GLIGIDARTLF+P SG
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNV-FESNQERGLIGIDARTLFSPSSGV 124
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGA
Sbjct: 125 SLVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGA 182
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 183 VQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIR 242
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTL
Sbjct: 243 STDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTL 302
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+
Sbjct: 303 RAPHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLM 362
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+
Sbjct: 363 QAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALF 422
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
Y G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGM TA
Sbjct: 423 YCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTA 482
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+S
Sbjct: 483 RITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEIS 542
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EINAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+A
Sbjct: 543 EINAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASA 601
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
PIFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 602 PIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131689|dbj|BAI63251.1| phytochrome E [Pieris nana]
gi|283131707|dbj|BAI63260.1| phytochrome E [Pieris japonica]
Length = 657
Score = 1051 bits (2719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/655 (77%), Positives = 571/655 (87%), Gaps = 7/655 (1%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELN---GLIGIDARTLFTPPSGA 149
IQPFGCMLA+EEP+F+IIGYSENC +L L + FE N GLIGID RTLF+P SG
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNV-FESNQERGLIGIDVRTLFSPSSGV 124
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGA
Sbjct: 125 SLVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGA 182
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 183 VQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIR 242
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTL
Sbjct: 243 STDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTL 302
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+
Sbjct: 303 RAPHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLM 362
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+
Sbjct: 363 QAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALF 422
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
Y G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATA
Sbjct: 423 YCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATA 482
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+S
Sbjct: 483 RITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEIS 542
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EINAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+A
Sbjct: 543 EINAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASA 601
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
PIFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 602 PIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|225447543|ref|XP_002268724.1| PREDICTED: phytochrome C [Vitis vinifera]
Length = 1118
Score = 1051 bits (2719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/957 (54%), Positives = 681/957 (71%), Gaps = 29/957 (3%)
Query: 17 HNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPP 72
+ T +SS A+ K G ++ DA L FE+S + F+YS SV S
Sbjct: 7 NKTNCSRSSSARSK---HGARVVAQTPIDAQLHVNFEES---ERHFDYSASVDFNISSST 60
Query: 73 EGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDF 129
VP ++AYL K+QRG LIQPFGCM+AV+E ++ YSEN EMLDL S +
Sbjct: 61 SDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQ 120
Query: 130 ELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
+ IG D RTLF A+L KAA E++LLNPILVH R+ KPFYAILHRIDVG
Sbjct: 121 QEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHC--RNSGKPFYAILHRIDVG 178
Query: 190 IVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYD 249
++IDLEP D ++ AGA++S KLA AISRLQ+LP G+I LLCD +V++ +LTGYD
Sbjct: 179 LIIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYD 238
Query: 250 RVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIP 309
RVM+Y FH+D+HGEV++E R+ DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A P
Sbjct: 239 RVMVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPP 298
Query: 310 VMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS--------- 360
V VIQ+K L QPL L STLRSPHGCH QYM NMGS+ASLVM+V IN +D
Sbjct: 299 VKVIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESEQQKG 358
Query: 361 MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCD 420
KLWGLVVCH+TSPR++PFPLRYACEFLVQ F +Q+ E+++A Q+ EK+IL+TQ +LCD
Sbjct: 359 RKLWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCD 418
Query: 421 MLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDC 480
MLLRDAP IVTQSP++MDLV+CDGAALYY + WL+GVTPTE+Q++DI WLL H
Sbjct: 419 MLLRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEYHSGS 478
Query: 481 TGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHK 540
TGLSTDSL EAGYP A++LG AVCG+A +I S DFLFWFRSHTAKE+KWGGAKH P+ K
Sbjct: 479 TGLSTDSLMEAGYPAASVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDK 538
Query: 541 DNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNT 600
D+G KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S Q+ + +DSK+ N
Sbjct: 539 DDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQD-KSADDSKMIVNV 597
Query: 601 QQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMG 660
+ ++ D+L V EMVRLIETA+ PI VD++G INGWN K AELTGL +A+G
Sbjct: 598 PSVDASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIG 657
Query: 661 KSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDY 720
LI+ +V +S V+ ++ AL G E++NVE+KL+ F Q+ + V ++VNAC SRD
Sbjct: 658 MPLIN-LVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACCSRDI 716
Query: 721 KNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAA 780
K+NV GVCFVGQDIT +K++MDK+ R+QGDY I+++ + LIPPIF DE+ C EWN A
Sbjct: 717 KDNVVGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLEWNDA 776
Query: 781 MEKVTGWMRHEVIGKMLPREIF--GNF-CRMKGQDMLTKFMILLYQGITGQGTENFPFGF 837
M+ ++G R E +ML E+F NF C++K D LTK ILL I GQ + FGF
Sbjct: 777 MQNLSGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKLLFGF 836
Query: 838 FNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELA 897
F++ G+++E L+A++RTDAEGK+ G CF+ + P+LQ A++ Q + + +K+LA
Sbjct: 837 FDQHGKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSLKKLA 896
Query: 898 YIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
YIRQ+++ PLNGI F+ L++SS +S++Q+++L TS C+ Q+ I+D DL IEE
Sbjct: 897 YIRQQIRKPLNGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIEE 953
>gi|283131673|dbj|BAI63243.1| phytochrome E [Pieris nana]
gi|283131695|dbj|BAI63254.1| phytochrome E [Pieris nana]
Length = 657
Score = 1051 bits (2718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/654 (76%), Positives = 569/654 (87%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+P SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSPSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP +SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGM TAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131679|dbj|BAI63246.1| phytochrome E [Pieris nana]
Length = 657
Score = 1051 bits (2717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/655 (77%), Positives = 570/655 (87%), Gaps = 7/655 (1%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELN---GLIGIDARTLFTPPSGA 149
IQPFGCMLA+EEP+F+IIGYSENC +L L + FE N GLIGID RTLF+P SG
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNV-FESNQERGLIGIDVRTLFSPSSGV 124
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGA
Sbjct: 125 SLVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGA 182
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 183 VQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIR 242
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTL
Sbjct: 243 STDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTL 302
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AV++N DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+
Sbjct: 303 RAPHGCHTQYMANMGSIASLVLAVVVNDNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLM 362
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+
Sbjct: 363 QAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALF 422
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
Y G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATA
Sbjct: 423 YCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATA 482
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+S
Sbjct: 483 RITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEIS 542
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EINAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+A
Sbjct: 543 EINAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASA 601
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
PIFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 602 PIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131685|dbj|BAI63249.1| phytochrome E [Pieris nana]
Length = 657
Score = 1051 bits (2717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/655 (77%), Positives = 570/655 (87%), Gaps = 7/655 (1%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELN---GLIGIDARTLFTPPSGA 149
IQPFGCMLA+EEP+F+IIGYSENC +L L + FE N GLIGIDARTLF+P SG
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNV-FESNQERGLIGIDARTLFSPSSGV 124
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP +SGDPALSLAGA
Sbjct: 125 SLVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGA 182
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 183 VQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIR 242
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTL
Sbjct: 243 STDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVGVIGTDELKQPLCLVNSTL 302
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+
Sbjct: 303 RAPHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLM 362
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+
Sbjct: 363 QAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALF 422
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
Y G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGM TA
Sbjct: 423 YCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTA 482
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+S
Sbjct: 483 RITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEIS 542
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EINAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+A
Sbjct: 543 EINAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASA 601
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
PIFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 602 PIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131687|dbj|BAI63250.1| phytochrome E [Pieris nana]
Length = 657
Score = 1051 bits (2717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/654 (76%), Positives = 568/654 (86%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLEEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+P SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSPSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP +SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNDNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGM TAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131671|dbj|BAI63242.1| phytochrome E [Pieris nana]
Length = 657
Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/655 (77%), Positives = 569/655 (86%), Gaps = 7/655 (1%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELN---GLIGIDARTLFTPPSGA 149
IQPFGCMLA+EEP F+IIGYSENC +L L + FE N GLIGIDARTLF+P SG
Sbjct: 66 IQPFGCMLAIEEPNFKIIGYSENCFNLLGLNLNNV-FESNQERGLIGIDARTLFSPSSGV 124
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP +SGDPALSLAGA
Sbjct: 125 SLVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGA 182
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 183 VQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIR 242
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTL
Sbjct: 243 STDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTL 302
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+
Sbjct: 303 RAPHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLM 362
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+
Sbjct: 363 QAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALF 422
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
Y G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGM TA
Sbjct: 423 YCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTA 482
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+S
Sbjct: 483 RITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEIS 542
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EINAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+A
Sbjct: 543 EINAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASA 601
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
PIFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 602 PIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131705|dbj|BAI63259.1| phytochrome E [Pieris nana]
Length = 657
Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/654 (76%), Positives = 569/654 (87%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+P SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSPSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP +SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IV QSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVMQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131675|dbj|BAI63244.1| phytochrome E [Pieris nana]
Length = 657
Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/655 (77%), Positives = 571/655 (87%), Gaps = 7/655 (1%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELN---GLIGIDARTLFTPPSGA 149
IQPFGCMLA+EEP+F+IIGYSENC +L L + FE N GLIGIDARTLF+P SG
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNV-FESNQERGLIGIDARTLFSPSSGV 124
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGA
Sbjct: 125 SLVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGA 182
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 183 VQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIR 242
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTL
Sbjct: 243 STDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTL 302
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+
Sbjct: 303 RAPHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLM 362
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQLYMELQ+A QL EK +L Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+
Sbjct: 363 QAFGLQLYMELQLASQLVEKKVLWMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALF 422
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
Y G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATA
Sbjct: 423 YCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATA 482
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+S
Sbjct: 483 RITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEIS 542
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EINAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+A
Sbjct: 543 EINAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASA 601
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
PIFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 602 PIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131693|dbj|BAI63253.1| phytochrome E [Pieris nana]
Length = 657
Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/655 (76%), Positives = 570/655 (87%), Gaps = 7/655 (1%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELN---GLIGIDARTLFTPPSGA 149
IQPFGCMLA+EEP+F+IIGYSENC +L L + FE N GLIGIDARTLF+P SG
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNV-FESNQERGLIGIDARTLFSPSSGV 124
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP +SGDPALSLAGA
Sbjct: 125 SLVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGA 182
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 183 VQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIR 242
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTL
Sbjct: 243 STDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTL 302
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+
Sbjct: 303 RAPHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLM 362
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+
Sbjct: 363 QAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALF 422
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
Y G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGM TA
Sbjct: 423 YCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTA 482
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITS+DFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+S
Sbjct: 483 RITSRDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEIS 542
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EINAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+A
Sbjct: 543 EINAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASA 601
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
PIFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 602 PIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131711|dbj|BAI63240.1| phytochrome E [Pieris nana]
Length = 657
Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/654 (76%), Positives = 569/654 (87%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+P SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSPSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LP GDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M PRSSF AFLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMFPRSSFNAFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131677|dbj|BAI63245.1| phytochrome E [Pieris nana]
gi|283131773|dbj|BAI63230.1| phytochrome E [Pieris nana]
Length = 657
Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/654 (76%), Positives = 570/654 (87%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+ SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSLSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|2507185|sp|P33529.2|PHY_MOUSC RecName: Full=Phytochrome
gi|1419681|emb|CAA64796.1| phytochrome [Mougeotia scalaris]
Length = 1124
Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/934 (56%), Positives = 676/934 (72%), Gaps = 21/934 (2%)
Query: 39 IDHYNADAGLLAEFE-QSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
+ +ADA L FE S + G SF+Y++SV ++P E + + +TAYL ++QRG +IQ
Sbjct: 23 VTQASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRGSIIQ 82
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGASL 151
FGCM+AVE TFRII YSEN EML + +S D + IG D R+L +P S + +
Sbjct: 83 SFGCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPTGDHQNAIGIGTDVRSLLSPSSVSVV 142
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEP-SKSGDPALSLAGAV 210
KA A+ ++S++NPI V+S + +K F+AILH DVG+VIDLEP S S D A+ AGAV
Sbjct: 143 EKAVAANDVSMMNPIAVYS--LATQKLFFAILHMNDVGLVIDLEPISSSSDSAMFSAGAV 200
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QS KLA AISRLQ+LPGGDI LCD VVE+V++LTGYDRVM Y FHDD+HGEVV+EIRR
Sbjct: 201 QSHKLAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRR 260
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF +NR+RMICDC + V V+Q + Q + L ST+R
Sbjct: 261 SDLEPYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGSTMR 320
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSM---------KLWGLVVCHHTSPRYIPFPL 381
HGCH QYM NMGS ASLVM+V IN + + KLWGL+VCHH++PR+IPFP+
Sbjct: 321 GVHGCHTQYMMNMGSTASLVMSVTINDTNEIAGGPGMKGRKLWGLIVCHHSTPRHIPFPI 380
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q F LQL ME+++A Q EK+ILRTQ LLCDMLLRDAP IV+QSP++MDLV
Sbjct: 381 RSACEFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMDLV 440
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAAL +GGRCWL+G++PT+ Q+KDIA WL+++H D TGLSTDSL +AGYP A LG
Sbjct: 441 KCDGAALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKARELGV 500
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
VCGMA ARIT DFLFWFR H KEVKW GAK +D G +MHPRSSFKAFLEVVK
Sbjct: 501 DVCGMAAARITENDFLFWFRGHAQKEVKWAGAKDGGSEED-GSRMHPRSSFKAFLEVVKQ 559
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PWE E++AIHSLQ+++R SFQ++E++ D K+ + + +QG++ELSSVA EMV
Sbjct: 560 RSLPWEDVEMDAIHSLQLILRGSFQDIEDKEDRKIV-HARLKEMHLQGMEELSSVASEMV 618
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETATAPI VD++G +NGWN K++ELTGL E MGKSL+ ++ H S+ VE L+
Sbjct: 619 RLIETATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLLY 678
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLM 741
AL GEE++NVE++L+ + +Q+ V ++VNAC SRD V GVCFV QD+T EK++
Sbjct: 679 MALNGEEEQNVEIRLKTWGMQQGKGPVILMVNACASRDVSEKVVGVCFVAQDVTGEKIVQ 738
Query: 742 DKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREI 801
DKF R+QGDY I++S N LIPPIF SDE+ C EWN AME+++G R E IGKML RE+
Sbjct: 739 DKFTRIQGDYTTIVRSHNSLIPPIFGSDESGFCVEWNPAMERLSGVKREEAIGKMLTREL 798
Query: 802 FGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKV 861
FG R+K D LTKFMI+L ++ T+ FPF F++R G+ VEV LT S+R ++EG V
Sbjct: 799 FGGILRLKNVDGLTKFMIVLNAAMSSHDTDKFPFTFYDRSGKIVEVLLTTSKRCNSEGVV 858
Query: 862 IGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSS 921
G FCF+ +LQ AL Q + K KELAYIRQE++NPL+GI F +E +
Sbjct: 859 TGVFCFLHTASSELQQALTVQKAAERVAEVKAKELAYIRQEIQNPLDGIHFARSFMEHTV 918
Query: 922 ISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+SE+Q+Q +ETS CE+Q+ I+ MDL IE+G
Sbjct: 919 LSEDQKQLIETSATCEKQLRRILADMDLASIEKG 952
>gi|283131755|dbj|BAI63239.1| phytochrome E [Pieris nana]
Length = 657
Score = 1049 bits (2712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/654 (76%), Positives = 569/654 (87%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+P SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSPSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LP GDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSCGVVENLMCRAF 656
>gi|283131703|dbj|BAI63258.1| phytochrome E [Pieris nana]
Length = 657
Score = 1048 bits (2711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/655 (76%), Positives = 569/655 (86%), Gaps = 7/655 (1%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELN---GLIGIDARTLFTPPSGA 149
IQPFGCMLA+EEP+F+IIGYSENC +L L + FE N GLIGIDARTLF+P SG
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNV-FESNQERGLIGIDARTLFSPSSGV 124
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP +SGDPALSLAGA
Sbjct: 125 SLVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPVRSGDPALSLAGA 182
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 183 VQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIR 242
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTL
Sbjct: 243 STDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTL 302
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSP Y+PFPLRYACEFL+
Sbjct: 303 RAPHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPHYVPFPLRYACEFLM 362
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+
Sbjct: 363 QAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALF 422
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
Y G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGM TA
Sbjct: 423 YCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMVTA 482
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+S
Sbjct: 483 RITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEIS 542
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EINAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+A
Sbjct: 543 EINAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASA 601
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
PIFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 602 PIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131765|dbj|BAI63234.1| phytochrome E [Pieris nana]
gi|283131769|dbj|BAI63232.1| phytochrome E [Pieris nana]
gi|283131771|dbj|BAI63231.1| phytochrome E [Pieris nana]
Length = 657
Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/654 (76%), Positives = 569/654 (87%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+ SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSLSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D GLSTDSLA+AGYP AALLG AVCGMATAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSKGLSTDSLADAGYPSAALLGDAVCGMATAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131767|dbj|BAI63233.1| phytochrome E [Pieris nana]
Length = 657
Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/654 (76%), Positives = 569/654 (87%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+ SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSLSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLMEKKVLRMQTLLCDMCLRDAPFGIVTQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D GLSTDSLA+AGYP AALLG AVCGMATAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSKGLSTDSLADAGYPSAALLGDAVCGMATAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131759|dbj|BAI63237.1| phytochrome E [Pieris nana]
Length = 657
Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/654 (76%), Positives = 569/654 (87%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+ SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSLSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LP GDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131683|dbj|BAI63248.1| phytochrome E [Pieris nana]
Length = 657
Score = 1047 bits (2708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/655 (76%), Positives = 569/655 (86%), Gaps = 7/655 (1%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELN---GLIGIDARTLFTPPSGA 149
IQPFGCMLA+EEP+F+IIGYSENC +L L + FE N GLIGID RTLF+P SG
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNV-FESNQERGLIGIDVRTLFSPSSGV 124
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGA
Sbjct: 125 SLVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGA 182
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKL V AISRLQ+LPGGDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 183 VQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIR 242
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+DLEPYLG+H+PA DI QAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTL
Sbjct: 243 STDLEPYLGLHYPATDILQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTL 302
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AV++N DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+
Sbjct: 303 RAPHGCHTQYMANMGSIASLVLAVVVNDNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLM 362
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+
Sbjct: 363 QAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALF 422
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
Y G+CWL+GVTPT+SQ+KDIA WLL NH D TGLSTDSLA+AGYP AALLG AVCGMATA
Sbjct: 423 YCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDSLADAGYPSAALLGDAVCGMATA 482
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+S
Sbjct: 483 RITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEIS 542
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EINAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+A
Sbjct: 543 EINAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASA 601
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
PIFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 602 PIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|283131763|dbj|BAI63235.1| phytochrome E [Pieris nana]
Length = 657
Score = 1045 bits (2702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/654 (76%), Positives = 568/654 (86%), Gaps = 5/654 (0%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
N+ + YNADAGLL EF+QS SGKSFNYSRSV++ P+ VP EQITAYLS+IQRGGL
Sbjct: 6 NRKSKAVALYNADAGLLDEFDQSADSGKSFNYSRSVVNAPKTVPAEQITAYLSRIQRGGL 65
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGLIGIDARTLFTPPSGAS 150
IQPFGCMLA+EEP+F+IIGYSENC +L L + E + GLIGIDARTLF+ SG S
Sbjct: 66 IQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGLIGIDARTLFSLSSGVS 125
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L A S+EISLLNPI VHS R+ +KPFYAILHRIDVGIVIDLEP++SGDPALSLAGAV
Sbjct: 126 LVNAVGSKEISLLNPIWVHS--RNTQKPFYAILHRIDVGIVIDLEPARSGDPALSLAGAV 183
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKL V AISRLQ+LP GDIG+LCD VVEDVQKLTGYDRVM+Y FHDDDHGEVVSEIR
Sbjct: 184 QSQKLVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRS 243
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
+DLEPYLG+H+PA DIPQAARFLFKQNRVRMICDCH+ V VI + ELKQPLCLVNSTLR
Sbjct: 244 TDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTDELKQPLCLVNSTLR 303
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AV++N+ DSMKLWGLVVCHHTSPRY+PFPLRYACEFL+Q
Sbjct: 304 APHGCHTQYMANMGSIASLVLAVVVNNNDSMKLWGLVVCHHTSPRYVPFPLRYACEFLMQ 363
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQLYMELQ+A QL EK +LR Q LLCDM LRDAPF IVTQSPSIMDLVKCDGAAL+Y
Sbjct: 364 AFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAPFGIVTQSPSIMDLVKCDGAALFY 423
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G+CWL+GVTPT+SQ+KDIA WLL NH D GLSTDSLA+AGYP AALLG AVCGMATAR
Sbjct: 424 CGKCWLLGVTPTKSQVKDIAEWLLKNHADSKGLSTDSLADAGYPSAALLGDAVCGMATAR 483
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGA HHPE KD+GG+M+PRSSF AFLEVVK+RS PWE+SE
Sbjct: 484 ITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMYPRSSFNAFLEVVKSRSLPWEISE 543
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
INAIHSLQ++MRDS++ M E++ K TQ + SK+QG+DELSSVACEMVRLIETA+AP
Sbjct: 544 INAIHSLQLIMRDSYR-MIEDSGPKGLVYTQIHDSKVQGLDELSSVACEMVRLIETASAP 602
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
IFGVDS+G INGWNAK+ ELTGL ASEA+GKSL++++V E+S+G VENL+CRA
Sbjct: 603 IFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLNDIVREDSRGVVENLMCRAF 656
>gi|115455391|ref|NP_001051296.1| Os03g0752100 [Oryza sativa Japonica Group]
gi|122246759|sp|Q10CQ8.1|PHYC_ORYSJ RecName: Full=Phytochrome C
gi|21070927|gb|AAM34402.1|AF377947_8 phytochrome C [Oryza sativa Japonica Group]
gi|4190974|dbj|BAA74448.1| phytochrome C [Oryza sativa Japonica Group]
gi|31712054|gb|AAP68360.1| phytochrome C [Oryza sativa Japonica Group]
gi|40538982|gb|AAR87239.1| phytochrome C [Oryza sativa Japonica Group]
gi|108711120|gb|ABF98915.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
gi|113549767|dbj|BAF13210.1| Os03g0752100 [Oryza sativa Japonica Group]
gi|125587941|gb|EAZ28605.1| hypothetical protein OsJ_12592 [Oryza sativa Japonica Group]
Length = 1137
Score = 1022 bits (2642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/956 (52%), Positives = 661/956 (69%), Gaps = 33/956 (3%)
Query: 23 KSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEGVPEEQIT 81
+SS A+ K ++ DA L AEFE S + F+YS SV + G ++
Sbjct: 14 RSSSARSK---HSARVVAQTPMDAQLHAEFE---GSQRHFDYSSSVGAANRSGATTSNVS 67
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGID 138
AYL +QRG +QPFGC+LAV TF ++ YSEN EMLDL + D +G D
Sbjct: 68 AYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREALAVGTD 127
Query: 139 ARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSK 198
RTLF S +L KAA +++LLNPILVH+ R+ KPFYAI+HRIDVG+VIDLEP
Sbjct: 128 VRTLFRSHSFVALQKAATFGDVNLLNPILVHA--RTSGKPFYAIMHRIDVGLVIDLEPVN 185
Query: 199 SGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHD 258
D ++ GA++S KLA AI+RLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+
Sbjct: 186 PVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHE 245
Query: 259 DDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKEL 318
D+HGEV++E +RSDLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L
Sbjct: 246 DEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQDDSL 305
Query: 319 KQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWG 365
QP+ + STLR+PHGCH QYM +MGS+ASLVM+V IN + KLWG
Sbjct: 306 TQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGRKLWG 365
Query: 366 LVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRD 425
L+VCHHTSPR++PFPLRYACEFL+Q F +Q+ E+++A Q E++ILRTQ LLCDMLLRD
Sbjct: 366 LMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDMLLRD 425
Query: 426 APFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLST 485
AP I TQSP++MDLVKCDGAALYY + W++G TP+E+++K+I WL H TGLST
Sbjct: 426 APVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGSTGLST 485
Query: 486 DSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGG 544
DSL EAGYPGAA LG VCGMA +I+SKDF+FWFRSHTAKE+KWGGAKH P + DNG
Sbjct: 486 DSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDADDNGR 545
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME---EENDSKVQGNTQ 601
KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S Q+ + N +
Sbjct: 546 KMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIVTAPS 605
Query: 602 QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGK 661
+ K+QG+ EL +V EMVRLIETATAPI VD +G+INGWN K AELTGLP EA+GK
Sbjct: 606 DDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVMEAIGK 665
Query: 662 SLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYK 721
L+D V+ ++S V+ ++ AL G E++N+++KL+ F Q+ + V ++VNAC SRD
Sbjct: 666 PLVDLVI-DDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSRDLS 724
Query: 722 NNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAM 781
V GVCFV QD+T + ++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM
Sbjct: 725 EKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNEAM 784
Query: 782 EKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFF 838
+K+TG R + + K+L E+F + CR+K LTK IL+ I+GQ E FGFF
Sbjct: 785 QKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLFGFF 844
Query: 839 NRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAY 898
N G+++E +TA++RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL Y
Sbjct: 845 NTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKELTY 904
Query: 899 IRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
IRQE++NPLNG++F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 905 IRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIEQ 960
>gi|7672696|gb|AAF66603.1|AF141942_1 phytochrome C [Oryza sativa Indica Group]
Length = 1137
Score = 1021 bits (2640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/956 (52%), Positives = 661/956 (69%), Gaps = 33/956 (3%)
Query: 23 KSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEGVPEEQIT 81
+SS A+ K ++ DA L AEFE S + F+YS SV + G ++
Sbjct: 14 RSSSARSK---HSARVVAQTPMDAQLHAEFE---GSQRHFDYSSSVGAANRSGATTSNVS 67
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGID 138
AYL +QRG +QPFGC+LAV TF ++ YSEN EMLDL + D +G D
Sbjct: 68 AYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREALAVGTD 127
Query: 139 ARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSK 198
RTLF S +L KAA +++LLNPILVH+ R+ KPFYAI+HRIDVG+VIDLEP
Sbjct: 128 VRTLFRSHSFVALQKAATFGDVNLLNPILVHA--RTSGKPFYAIMHRIDVGLVIDLEPVN 185
Query: 199 SGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHD 258
D ++ GA++S KLA AI+RLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+
Sbjct: 186 PVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHE 245
Query: 259 DDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKEL 318
D+HGEV++E +RSDLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L
Sbjct: 246 DEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQDDSL 305
Query: 319 KQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWG 365
QP+ + STLR+PHGCH QYM +MGS+ASLVM+V IN + KLWG
Sbjct: 306 TQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGRKLWG 365
Query: 366 LVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRD 425
L+VCHHTSPR++PFPLRYACEFL+Q F +Q+ E+++A Q E++ILRTQ LLCDMLLRD
Sbjct: 366 LMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDMLLRD 425
Query: 426 APFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLST 485
AP I TQSP++MDLVKCDGAALYY + W++G TP+E+++K+I WL H TGLST
Sbjct: 426 APVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGSTGLST 485
Query: 486 DSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGG 544
DSL EAGYPGAA LG VCGMA +I+SKDF+FWFRSHTAKE+KWGGAKH P + DNG
Sbjct: 486 DSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDADDNGR 545
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME---EENDSKVQGNTQ 601
KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S Q+ + N +
Sbjct: 546 KMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIVTAPS 605
Query: 602 QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGK 661
+ K+QG+ EL +V EMVRLIETATAPI VD +G+INGWN K AELTGLP EA+GK
Sbjct: 606 DDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVMEAIGK 665
Query: 662 SLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYK 721
L+D V+ ++S V+ ++ AL G E++N+++KL+ F Q+ + V ++VNAC SRD
Sbjct: 666 PLVDLVI-DDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSRDLS 724
Query: 722 NNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAM 781
V GVCFV QD+T + ++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM
Sbjct: 725 EKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNEAM 784
Query: 782 EKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFF 838
+K+TG R + + K+L E+F + CR+K LTK IL+ I+GQ E FGFF
Sbjct: 785 QKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLFGFF 844
Query: 839 NRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAY 898
N G+++E +TA++RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL Y
Sbjct: 845 NTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKELTY 904
Query: 899 IRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
IRQE++NPLNG++F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 905 IRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIEQ 960
>gi|51556875|gb|AAU06208.1| phytochrome C [Triticum aestivum]
gi|51556889|gb|AAU06215.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/942 (54%), Positives = 655/942 (69%), Gaps = 32/942 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQRGGLIQP 95
++ DA L AEFE S + F+YS SV ++ ++AYL +QRG IQP
Sbjct: 26 VVAQTPVDARLHAEFE---GSHRHFDYSSSVSALNRSGASTSSAVSAYLQNMQRGRYIQP 82
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASLA 152
FGC+LA+ +F ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 83 FGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVALH 142
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++S
Sbjct: 143 KAAVFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKS 200
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
KLA AISRLQ+LPGG++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV++E RRSD
Sbjct: 201 YKLAAKAISRLQSLPGGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSD 260
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L QP+ L ST+R+P
Sbjct: 261 LEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDDNLSQPISLCGSTMRAP 320
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIPF 379
HGCH QYM NMGSIASLVM++ IN + KLWGLVVCHHTSPR++PF
Sbjct: 321 HGCHAQYMANMGSIASLVMSITINEDEDEDGDTGSDQQPKGRKLWGLVVCHHTSPRFVPF 380
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++MD
Sbjct: 381 PLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 440
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL Y + ++G TP+E ++K I WLL H TGLSTDSL EAGYPGA+ L
Sbjct: 441 LVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGSTGLSTDSLLEAGYPGASAL 500
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEV 558
G+ VCGMA +I+SK F+FWFRSHTAKE+KWGGAKH P + DNG +MHPRSSF+AFLEV
Sbjct: 501 GEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDADDNGRRMHPRSSFRAFLEV 560
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELSS 615
VK RS PWE E++AIHSLQ+++R S Q+ E+ ND+ + + + K+QG+ EL
Sbjct: 561 VKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANDNTARSIVEAPSDDIKKIQGLLELKI 619
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETATAPI VD G INGWN KVAE+TGLP +EA+G L+D +V +S
Sbjct: 620 VTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEAIGMLLVD-LVEGDSVEV 678
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G E++N+E+KL+ F Q+ V ++VNAC SRD + V GVCFV QD+T
Sbjct: 679 VKQMLNSALQGTEEQNLEIKLKTFHQQESKGPVVLMVNACCSRDLSDKVVGVCFVAQDLT 738
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
K++MDK+ R+QGDY AI+++ N LIPPIF ++ C EWN AM+K+TG R + I K
Sbjct: 739 GHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAIDK 798
Query: 796 MLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
+L E+F CR+K Q LTK IL+ I+GQ E FGFFN G+++E LTA+
Sbjct: 799 LLIGEVFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAFGFFNTNGKYMESLLTAN 858
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL YIRQE+KNPLNG++F
Sbjct: 859 KRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKELTYIRQELKNPLNGMQF 918
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
KLLE S ++E QRQ ++ C+ Q+ I+ DL IE+
Sbjct: 919 TRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
>gi|158513185|sp|A2XM23.2|PHYC_ORYSI RecName: Full=Phytochrome C
Length = 1137
Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/956 (52%), Positives = 660/956 (69%), Gaps = 33/956 (3%)
Query: 23 KSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEGVPEEQIT 81
+SS A+ K ++ DA L AEFE S + F+YS SV + G ++
Sbjct: 14 RSSSARSK---HSARVVAQTPMDAQLHAEFE---GSQRHFDYSSSVGAANRSGATTSNVS 67
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGID 138
AYL +QRG +QPFGC+LAV TF ++ YSEN EMLDL + D +G D
Sbjct: 68 AYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREALAVGTD 127
Query: 139 ARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSK 198
RTLF S +L KAA +++LLNPILVH+ R+ KPFYAI+HRIDVG+VIDLEP
Sbjct: 128 VRTLFRSHSFVALQKAATFGDVNLLNPILVHA--RTSGKPFYAIMHRIDVGLVIDLEPVN 185
Query: 199 SGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHD 258
D ++ GA++S KLA AI+RLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+
Sbjct: 186 PVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHE 245
Query: 259 DDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKEL 318
D+HGEV++E +RSDLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L
Sbjct: 246 DEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQDDSL 305
Query: 319 KQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWG 365
QP+ + STLR+PHGCH QYM +MGS+ASLVM+V IN + KLWG
Sbjct: 306 TQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGRKLWG 365
Query: 366 LVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRD 425
L+VCHHTSPR++PFPLRYACEFL+Q F +Q+ E+++A Q E++ILRTQ LLCDMLLRD
Sbjct: 366 LMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDMLLRD 425
Query: 426 APFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLST 485
AP I TQSP++MDLVKCDGAALYY + W++G TP+E+++K+I WL H TGLST
Sbjct: 426 APVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGSTGLST 485
Query: 486 DSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGG 544
DSL EAGYPGAA LG V GMA +I+SKDF+FWFRSHTAKE+KWGGAKH P + DNG
Sbjct: 486 DSLVEAGYPGAAALGDVVYGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDADDNGR 545
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME---EENDSKVQGNTQ 601
KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S Q+ + N +
Sbjct: 546 KMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIVTAPS 605
Query: 602 QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGK 661
+ K+QG+ EL +V EMVRLIETATAPI VD +G+INGWN K AELTGLP EA+GK
Sbjct: 606 DDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVMEAIGK 665
Query: 662 SLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYK 721
L+D V+ ++S V+ ++ AL G E++N+++KL+ F Q+ + V ++VNAC SRD
Sbjct: 666 PLVDLVI-DDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSRDLS 724
Query: 722 NNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAM 781
V GVCFV QD+T + ++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM
Sbjct: 725 EKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNEAM 784
Query: 782 EKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFF 838
+K+TG R + + K+L E+F + CR+K LTK IL+ I+GQ E FGFF
Sbjct: 785 QKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLFGFF 844
Query: 839 NRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAY 898
N G+++E +TA++RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL Y
Sbjct: 845 NTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKELTY 904
Query: 899 IRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
IRQE++NPLNG++F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 905 IRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIEQ 960
>gi|76574169|gb|ABA46868.1| phytochrome A [Solanum tuberosum]
Length = 1123
Score = 1017 bits (2629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/944 (53%), Positives = 659/944 (69%), Gaps = 33/944 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQ--ITAYLSKIQRGG 91
II + DA L A+FE+S G SF+YS SV ++ E P+ TAYL +IQ+G
Sbjct: 22 IIAQTSIDAKLHADFEES---GDSFDYSSSVRVTSVAGDEERPKSDKVTTAYLHQIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
IQPFG +LA++E T ++I +SEN EML + S + + + G IG D RT+FT PS
Sbjct: 79 FIQPFGSLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLG-IGTDIRTIFTGPS 137
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
GA+L KA E+SLLNP+LVH + KPFYAI+HR+ ++ID EP K + ++ A
Sbjct: 138 GAALQKALGFGEVSLLNPVLVHCKNSG--KPFYAIVHRVTGSLIIDFEPVKPYEVPMTAA 195
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEVVSE
Sbjct: 196 GALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSE 255
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A V V+Q ++L L L S
Sbjct: 256 ITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGS 315
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSP 374
TLR+PH CHLQYM NM S+ASLVMAV++N D +LWGLVVCH+T+P
Sbjct: 316 TLRAPHYCHLQYMENMNSVASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTP 375
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R++PFPLRYACEFL Q F++ + EL++ Q EKNILRTQ LLCDML+RDAP IV+QS
Sbjct: 376 RFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQS 435
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDLVKCDGAAL Y + +G+ P++ QL DI WL H D TGLSTDSL +AG+P
Sbjct: 436 PNIMDLVKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFP 495
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GA LG AVCGMA RI+ KD+LFW+RSHTA EV+WGGAKH P KD+G KMHPRSSFKA
Sbjct: 496 GALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKA 555
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEVVK RS PW+ E++AIHSLQ+++R++F++ + N + +T+ N ++ G+ EL
Sbjct: 556 FLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTNSIHTKLNDLRIDGMQELE 615
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EM+RLIETA+ PIF VD G +NGWN KVAELTGLP EA+GK L+ +V + S
Sbjct: 616 AVTAEMIRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLL-TLVEDSSVD 674
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V ++ AL G+E++NVE +++ + S + ++VNAC S+D +++V GVCF+ QDI
Sbjct: 675 TVNKMLELALQGKEERNVEFEIKAHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDI 734
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K +MDKF R++GDY AIIQ+ +PLIPPIF +D+ CSEWN+AM K+TGW R +V+
Sbjct: 735 TGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVMD 794
Query: 795 KMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
KML E+FG CR+K Q+ F ++L ITGQ +E PFGFF R G++VE L
Sbjct: 795 KMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFGRYGKYVECLLCV 854
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
S+R D EG V G FCF+Q+ +LQ AL Q L + ++K LAYIR+++KNPL+GI
Sbjct: 855 SKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIKNPLSGII 914
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F K+LE +S+ E Q+ L TS C+RQ+ I+D DL I EG
Sbjct: 915 FSWKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIEG 958
>gi|261865351|gb|ACY01932.1| phytochrome A [Beta vulgaris]
Length = 1125
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/937 (53%), Positives = 652/937 (69%), Gaps = 32/937 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSVIS------PPEGVPEEQITAYLSKIQRGGLIQPFGC 98
DA L A+FE+S + + R+ S PP+ ++ ++YL +IQ+G LIQPFGC
Sbjct: 29 DAKLHADFEESSSEFDYSSSVRATTSSSAGKQPPKS--DKVTSSYLLQIQKGKLIQPFGC 86
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LA++E TFR++ YS+N EML + S + D + G IG D RT+FT PS ++L KA
Sbjct: 87 LLALDEKTFRVVAYSDNAPEMLTMVSHAVPSVGDHPVIG-IGTDVRTIFTAPSASALQKA 145
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
++SLLNPILVH + KPFYAI+HR+ +VID EP K + ++ AGA+QS K
Sbjct: 146 LGFADVSLLNPILVHCKTSG--KPFYAIIHRVTGSLVIDFEPVKPYEVPMTAAGALQSYK 203
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G+I L DT+V++V +LTGYDRVM Y FHDDDHGEV+SEI + DLE
Sbjct: 204 LAAKAITRLQSLPSGNISRLVDTMVQEVYELTGYDRVMAYKFHDDDHGEVISEITKPDLE 263
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQAARFLF +N+VRMICDC A V VIQ ++L L L STLR+PHG
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKYVQVIQDEKLPFDLTLCGSTLRAPHG 323
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIPFPL 381
CH QYM NM SI SLVMAV++N +D +LWGLVVCHHTSPR++PFPL
Sbjct: 324 CHAQYMENMNSIGSLVMAVVVNDEDEDDNASAPPQSQKRKRLWGLVVCHHTSPRFVPFPL 383
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
RYACEFL Q F++ + EL++ Q EK ILRTQ LLCDML+RD P IVTQSP+IMDLV
Sbjct: 384 RYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLLCDMLMRDVPLGIVTQSPNIMDLV 443
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGA L Y W +GVTPT+ Q++DIA WL +H D TGLSTDSL +AGYPGA LG
Sbjct: 444 KCDGAVLLYNSNIWKIGVTPTDYQIRDIAVWLSLDHQDSTGLSTDSLYDAGYPGALALGD 503
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
VCGMA RIT KD LFWFRSHTA EVKWGGAKH P KD+G KMHPRSSFKAFLEVVKN
Sbjct: 504 TVCGMAAVRITLKDMLFWFRSHTAAEVKWGGAKHQPGEKDDGAKMHPRSSFKAFLEVVKN 563
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PW+ E++AIHSLQ+++R++F++ E + + +++ + K+ G EL +V EMV
Sbjct: 564 RSVPWKDFEMDAIHSLQLILRNAFKDKEAADLNTSVIHSKISDLKIDGYRELEAVTGEMV 623
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETAT PIF VD+ G +NGWN K++ELTGLP +EA+GK I +V + S V NL+
Sbjct: 624 RLIETATVPIFAVDADGLVNGWNTKISELTGLPVTEAVGKH-IAALVEDCSIDTVRNLLQ 682
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLM 741
AL G+E+K+V+ ++++ + + ++VNAC S+D NV GVCF+ QDIT +K +M
Sbjct: 683 LALQGKEEKDVQFEIKRHQSMVDTGPISLVVNACASKDVNGNVIGVCFIAQDITGQKTVM 742
Query: 742 DKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREI 801
DKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN AM K+TG+ R EV+ KML E+
Sbjct: 743 DKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMSKLTGYKREEVMDKMLLGEV 802
Query: 802 FGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAE 858
FG CR+K Q+ ++L ++GQ TE P GFF R G+++E L +++ D E
Sbjct: 803 FGTHKSCCRLKNQEAFVNLGVVLNGAMSGQDTEKVPIGFFTRTGKYIECLLCVNKKLDRE 862
Query: 859 GKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLE 918
G V G FCF+Q+ DLQ AL Q L + ++K LAY++++++NPL GI F KLLE
Sbjct: 863 GAVTGVFCFLQLASQDLQHALHVQRLAEQAASKRLKALAYMKRQIRNPLCGIMFSRKLLE 922
Query: 919 SSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+ + E QR L TS C+RQ+ I+D DL CI +G
Sbjct: 923 GTDLGEEQRLLLHTSAQCQRQLNKILDDSDLDCIIDG 959
>gi|296083241|emb|CBI22877.3| unnamed protein product [Vitis vinifera]
Length = 982
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/882 (57%), Positives = 627/882 (71%), Gaps = 119/882 (13%)
Query: 78 EQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNG 133
+QITAYLSKIQRGG IQPFGCMLAV+E TFR+I +SEN EML L +S E E+
Sbjct: 46 QQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQSVPSLEKPEIL- 104
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
L+G D RTLFTP S L KA +REI+LLNP+ +HS + KPFYAILHRIDVGIVID
Sbjct: 105 LVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSG--KPFYAILHRIDVGIVID 162
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP+++ DPALS+AGA
Sbjct: 163 LEPARTEDPALSIAGA-------------------------------------------- 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
D+HGEVV+E +RSDLEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV+VI
Sbjct: 179 -----DEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHATPVLVI 233
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTS 373
Q + L QPLCLV STLR+PHGCH QYM NMGS ASL MA
Sbjct: 234 QDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMA--------------------- 272
Query: 374 PRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQ 433
FL+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IVTQ
Sbjct: 273 -------------FLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQ 319
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
SPSIMDLVKCDGAALY G+ + GVTPTE+Q+KDIA WLL NH D TGLSTDSLA+AGY
Sbjct: 320 SPSIMDLVKCDGAALYCQGKYYPTGVTPTEAQIKDIAEWLLANHADSTGLSTDSLADAGY 379
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGAA LG AVCGMA A ITS+DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFK
Sbjct: 380 PGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 439
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ + ++SK + Q ++QG+DEL
Sbjct: 440 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNSKAVMHAQLGELELQGMDEL 499
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
SSVA EM LTGL EAMGKSL+ ++V++ES+
Sbjct: 500 SSVAREM-----------------------------LTGLSVEEAMGKSLVHDLVYKESE 530
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ L+ AL GEEDKNVE+KLR F+ Q+ V+++VNAC+SRDY NN+ GVCFVGQD
Sbjct: 531 ETVDKLLHHALQGEEDKNVEIKLRTFDSQQHKKAVFVVVNACSSRDYTNNIVGVCFVGQD 590
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
+T +KV+MDKFI +QGDY+AI+ S NPLIPPIFASDEN CSEWN AMEK+TGW R ++I
Sbjct: 591 VTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVCSEWNTAMEKLTGWSRGDII 650
Query: 794 GKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASR 853
GKML EIFG+ CR+KG D LTKFMI+L+ I GQ T+ FPF FF++ G++V+ LTA++
Sbjct: 651 GKMLVGEIFGSSCRLKGPDALTKFMIVLHNAIGGQDTDKFPFSFFDQNGKYVQALLTANK 710
Query: 854 RTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFV 913
R + EG++IG FCF+QI P+LQ AL+ Q ++ +A++KELAYI QE+KNPL+GIRF
Sbjct: 711 RVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFARMKELAYICQEIKNPLSGIRFT 770
Query: 914 HKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+ LLE++ ++E+Q+Q+LETS ACE+Q+ II +DL IE+G
Sbjct: 771 NSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSIEDG 812
>gi|2499555|sp|P93673.1|PHYA_LATSA RecName: Full=Phytochrome type A
gi|1848273|gb|AAB47994.1| phytochrome type A [Lathyrus sativus]
Length = 1124
Score = 1016 bits (2627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/964 (52%), Positives = 666/964 (69%), Gaps = 34/964 (3%)
Query: 18 NTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSR------SVISP 71
T P +SS+ + N + II DA L A FE+S G SF+YS SV
Sbjct: 3 TTRPSQSSNNSGRSRNSAR-IIAQTTVDAKLHATFEES---GSSFDYSSWVRVSGSVDGD 58
Query: 72 PEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----E 127
+ + TAYL+ IQRG IQPFGC+LA++E T +++ YSEN EML + S +
Sbjct: 59 QQPRSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVG 118
Query: 128 DFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
D G IG D RT+FT PS ++L KA E+SLLNPILVH + KPFYAI+HR+
Sbjct: 119 DHPALG-IGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSG--KPFYAIIHRVT 175
Query: 188 VGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTG 247
++ID EP K + ++ AGA+QS KLA AI+RLQ+L G + LCDT+V++V +LTG
Sbjct: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTG 235
Query: 248 YDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHA 307
YDRVM Y FH+DDHGEV++EI + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 236 YDRVMAYKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNA 295
Query: 308 IPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------- 359
V V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N D
Sbjct: 296 KHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADA 355
Query: 360 -----SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRT 414
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRT
Sbjct: 356 VLPQKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRT 415
Query: 415 QVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLL 474
Q LLCDML+RDAP IV+QSP+IMDLVKCDGAAL+Y + WL+G TPTE Q+++IA W+
Sbjct: 416 QTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTEYQIREIALWMS 475
Query: 475 NNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAK 534
H D TGLSTDSL +AG+PGA L VCGMA RITSKD +FWFRSHTA E++WGGAK
Sbjct: 476 EYHTDSTGLSTDSLLDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAK 535
Query: 535 HHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDS 594
H P +D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++ ++ + + +
Sbjct: 536 HEPGEQDDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLN 595
Query: 595 KVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLP 654
NT+ N K++G+ EL +V EMVRLIETAT PI VD GT+NGWN K+AELTGLP
Sbjct: 596 TKAINTRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLP 655
Query: 655 ASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNA 714
EA+GK L+ +V + S V+ ++ AL GEE+KNV+ +++ Q + + ++VNA
Sbjct: 656 VGEAIGKHLL-TLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVEFGPISLIVNA 714
Query: 715 CTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACC 774
C SRD + NV GVCFV QDIT +K +MDKF R++GDY+AI+Q+ N LIPPIF +DE C
Sbjct: 715 CASRDLRENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWC 774
Query: 775 SEWNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTE 831
EWNAAM K+TGW R EV+ KML E+FG + CR+K Q+ F I+L + +TG TE
Sbjct: 775 CEWNAAMIKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETE 834
Query: 832 NFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYA 891
FGFF+R+G++VE L+ S++ DAEG V G FCF+Q+ P+LQ AL Q L +
Sbjct: 835 KVAFGFFSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALK 894
Query: 892 KIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRC 951
++K L Y++++++NPL GI F K+LE + + Q+Q + TS C+RQ+ I+D DL
Sbjct: 895 RLKVLTYMKRQIRNPLAGIVFSSKMLEGTDLETEQKQIVNTSSQCQRQLSKILDDSDLDG 954
Query: 952 IEEG 955
I +G
Sbjct: 955 IIDG 958
>gi|6671484|gb|AAC49301.2| phytochrome F [Solanum lycopersicum]
Length = 1118
Score = 1015 bits (2625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/934 (54%), Positives = 655/934 (70%), Gaps = 26/934 (2%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQRGGLIQP 95
+I DA L EFE+S + F+YS SV + VP ++ YL K+QRG LIQP
Sbjct: 26 VIAQTPVDAKLHVEFEES---EQQFDYSSSVNLSNSTSNVPSSTVSDYLQKMQRGSLIQP 82
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLA 152
FGCM+A++ F +I YSEN EMLDL S + + G D R LF ++L
Sbjct: 83 FGCMIAIDAQNFAVIAYSENAPEMLDLTPHAVPSIEQQEALTFGTDVRKLFRSSGASALE 142
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
KA + E+SLLNPILVH + KPFYAILHRI+VG+VIDLEP + ++ AGA++S
Sbjct: 143 KAVSFGELSLLNPILVHCKNSG--KPFYAILHRIEVGLVIDLEPVDPHEVPVTTAGAIKS 200
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
KLA AI +LQ+LP GDI LLCD +V +V LTGYDRVM+Y FH+D+HGEVV+E R +
Sbjct: 201 YKLAAKAIRKLQSLPSGDISLLCDVLVREVSHLTGYDRVMVYKFHEDEHGEVVAECRTPE 260
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A P+ VIQ L Q L L STLR+P
Sbjct: 261 LEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPIRVIQDPRLAQSLSLGGSTLRAP 320
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIPFPLRY 383
HGCH QYMTNMG++AS+ M+V+IN +D KLWGLVVCHHT PR++ FPLRY
Sbjct: 321 HGCHAQYMTNMGTVASMAMSVMINEQDDELDSDQQVGRKLWGLVVCHHTCPRFLSFPLRY 380
Query: 384 ACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKC 443
A EFL+Q FS+Q+ E+++A QL EK IL+ Q +LCDMLLRDAP IVTQSP++MDLVKC
Sbjct: 381 ASEFLLQVFSVQVNKEVEMAAQLKEKQILQIQTVLCDMLLRDAPMGIVTQSPNVMDLVKC 440
Query: 444 DGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAV 503
DGAALYY + WL GVTP ESQ++DIA WL +HGD TGL+TDSL EAG+PGA++LG AV
Sbjct: 441 DGAALYYRNKLWLHGVTPAESQIRDIAEWLNESHGDSTGLNTDSLMEAGFPGASVLGDAV 500
Query: 504 CGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRS 563
CGMA +ITSKDFLFWFRSHTAKE+KWGGAKH P KD+G KMHPRSSFKAFLEVVK RS
Sbjct: 501 CGMAAVKITSKDFLFWFRSHTAKEIKWGGAKHLPGDKDDGRKMHPRSSFKAFLEVVKRRS 560
Query: 564 FPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRL 623
PWE E++AIHSLQ+++R S Q+ E + SK+ N + + VD L +MVRL
Sbjct: 561 LPWEDVEMDAIHSLQLILRGSLQD-EAADCSKMIVNVPAVDTIIDRVDTLH--INDMVRL 617
Query: 624 IETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRA 683
+ETA+ P+ VD+SG INGWN+KV+ELTGLP +G L+D V+ + ++ ++ A
Sbjct: 618 VETASMPVLAVDTSGRINGWNSKVSELTGLPVENVIGVPLVDLVIG-GTTNTIKRVLSLA 676
Query: 684 LLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDK 743
L G+E+KNVE+KLR Q++ + I+VNAC SRD+K N+ GVCF G+D+T K++ DK
Sbjct: 677 LQGKEEKNVEIKLRTLGPQEKVGSISIVVNACCSRDFKQNIVGVCFTGKDVTGLKLIKDK 736
Query: 744 FIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF- 802
+ R+QGDY II S +PLIPPIF DE C EWN AM K+TG R EVI +ML E+F
Sbjct: 737 YSRVQGDYVGIIHSPSPLIPPIFVMDEQGRCVEWNDAMHKLTGSKREEVIDQMLLGEVFT 796
Query: 803 -GNF-CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGK 860
+F CR+K QD LT+ ILL + I G E FG FN+Q +++E ++A+++ D +G+
Sbjct: 797 VNSFGCRVKDQDTLTQLTILLNRVIAGGEGEKLFFGLFNKQDKYIEALISANKKVDDDGR 856
Query: 861 VIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESS 920
V G CF+ + P+LQ A+ Q L + +K+LAY+R E+KNPLNGI + LL+SS
Sbjct: 857 VTGVLCFLHVPSPELQYAMHVQKLSEQAAKNSLKKLAYVRLELKNPLNGINCIQNLLKSS 916
Query: 921 SISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
+S++QRQ L+TS C++Q+ IID D+ IEE
Sbjct: 917 DLSKDQRQLLKTSTMCQKQLAKIIDDTDIESIEE 950
>gi|38037242|gb|AAR08427.1| phytochrome A [Monotropastrum globosum]
Length = 1130
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/971 (51%), Positives = 666/971 (68%), Gaps = 44/971 (4%)
Query: 18 NTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV--------- 68
++ P +SS + + + + II DA L A+FE+S G SF+YS SV
Sbjct: 3 SSRPTQSSGSSGRSKHSAR-IIAQTTVDAKLHADFEES---GGSFDYSTSVRFTGTVGGD 58
Query: 69 ISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-- 126
I P ++ TAYL +IQRG LIQPFGC+LAV+E TF++I YSEN EML + S +
Sbjct: 59 IQPRS---DKVTTAYLHQIQRGKLIQPFGCLLAVDEKTFKVIAYSENAPEMLTMVSHAVP 115
Query: 127 --EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILH 184
D L G IG D RT+FT PS A+L KA E+SLLNPILVH + KPFYAI+H
Sbjct: 116 SVGDHPLLG-IGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSG--KPFYAIVH 172
Query: 185 RIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
R+ ++ID EP K + ++ AGA+QS KLA AI+RLQ+LP G++ +LCD +V++V +
Sbjct: 173 RVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMRILCDAMVQEVFE 232
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FHDDDHGEV SE+ + LEPYLG+H+PA DIPQAARFLF +N++RMICD
Sbjct: 233 LTGYDRVMVYKFHDDDHGEVFSELTKPGLEPYLGLHYPATDIPQAARFLFMKNKIRMICD 292
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSM--- 361
CHA V VIQ +L L L STLR+PH CHLQYM NM SIASLVM+V++N D
Sbjct: 293 CHAKQVKVIQDDKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEGDG 352
Query: 362 --------------KLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLA 407
+LWGL+VCH+T+PR++PFPLRYACEFL Q F++ + EL++ Q+
Sbjct: 353 GGSSVSSNQQQKIKRLWGLLVCHNTTPRFVPFPLRYACEFLAQVFTIHVNKELELENQIH 412
Query: 408 EKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLK 467
EKNILRTQ LLCDML+RDAP IV+QSP++MDLVKCDGA L Y + + +G TPT+ QL+
Sbjct: 413 EKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKDKTYRMGTTPTDFQLR 472
Query: 468 DIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKE 527
DI +WL H D TGLSTDSL +AGYPGA G VCGMA +ITS D LFWF++ TA E
Sbjct: 473 DIVYWLSEYHTDSTGLSTDSLYDAGYPGALAFGDGVCGMAAVKITSNDMLFWFKAQTAAE 532
Query: 528 VKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQE 587
++WGGAKH +D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++
Sbjct: 533 IQWGGAKHESGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD 592
Query: 588 MEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+ + + +T+ + K++G++EL +V EMVRLIETAT PI VD G +NGWN K+
Sbjct: 593 TKAMDATTDVIHTRLHDLKIEGMEELEAVTSEMVRLIETATVPILAVDVDGLVNGWNLKI 652
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGLP +A+G+ L+ +V + S G V+ ++ AL G+E++N++ +L+ E ++
Sbjct: 653 AELTGLPVDKAIGRDLL-SLVEDSSTGIVKKMLDLALQGKEEQNIQFELKTDESRRDSGP 711
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
+ ++VNAC SRD+ NV GVCFV QDIT K +MDKF R++GDY+AI+Q+ NPLIPPI
Sbjct: 712 ISLVVNACASRDHHENVVGVCFVAQDITGHKTVMDKFTRIEGDYKAIVQNPNPLIPPILG 771
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQG 824
+DE CSEWN AMEK++GW R +VI KML E+FG CR+K Q+ I+L
Sbjct: 772 TDEFGWCSEWNLAMEKISGWNREDVINKMLLGEVFGTHVVCCRLKNQEAFVNLGIVLNNA 831
Query: 825 ITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGL 884
+TG+ +E FGFF R G++VE L AS++ D EG V G FC +Q+ P+LQ AL Q L
Sbjct: 832 VTGRESEKISFGFFARNGKYVECILCASKKIDGEGAVTGVFCLLQLASPELQQALHVQRL 891
Query: 885 EDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTII 944
+ + KELAYIR++ + L+GI + +L+E + + E Q+Q L TS C+ Q+ I+
Sbjct: 892 TEQTALKRFKELAYIRRQTRASLSGIMYSWRLMEGTDLRERQKQLLHTSAQCQHQLTKIL 951
Query: 945 DGMDLRCIEEG 955
D DL CI +G
Sbjct: 952 DDTDLDCIIDG 962
>gi|464383|sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A
gi|7550158|gb|AAB21533.2| type A phytochrome [Solanum tuberosum]
Length = 1123
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/944 (53%), Positives = 657/944 (69%), Gaps = 33/944 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQ--ITAYLSKIQRGG 91
II + DA L A+FE+S G SF+YS SV ++ E P+ TAYL +IQ+G
Sbjct: 22 IIAQTSIDAKLHADFEES---GDSFDYSSSVRVTNVAEGEQRPKSDKVTTAYLHQIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
IQPFGC+LA++E T ++I +SEN EML + S + + + G IGID RT+FT PS
Sbjct: 79 FIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLG-IGIDIRTIFTGPS 137
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
GA+L KA E+SLLNP+LVH + KPFYAI+HR+ ++ID EP K + ++ A
Sbjct: 138 GAALQKALGFGEVSLLNPVLVHCKNSG--KPFYAIVHRVTGSLIIDFEPVKPYEVPMTAA 195
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEVVSE
Sbjct: 196 GALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSE 255
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A V V+Q ++L L L S
Sbjct: 256 ITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGS 315
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSP 374
TLR+PH CHLQYM NM SIASLVMAV++N D +LWGLVV H+T+P
Sbjct: 316 TLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVSHNTTP 375
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R+ PFPLRYACEFL Q F++ + EL++ Q EKNILRTQ LLCDML+RDAP IV+QS
Sbjct: 376 RFAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQS 435
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDL+KCDGAAL Y + +G+ P++ QL DI WL H D TGLSTDSL +AG+P
Sbjct: 436 PNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFP 495
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GA LG AVCGMA RI+ KD+LFW+RSHTA EV+WGGAKH P KD+G KMHPRSSFK
Sbjct: 496 GALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKG 555
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEVVK RS PW+ E++ IHSLQ+++R++F++ + N + + +T+ N K+ G+ EL
Sbjct: 556 FLEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTKLNDLKIDGMQELE 615
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETA+ PIF VD G +NGWN KVAELTGLP EA+GK L+ +V + S
Sbjct: 616 AVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLL-TLVEDSSVD 674
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V ++ AL G+E++NVE +++ + S + ++VNAC S+D +++V GVCF+ QDI
Sbjct: 675 TVNKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDI 734
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K +MDKF R++GDY AIIQ+ +PLIPPIF +D+ CSEWN+AM +TGW R +V+
Sbjct: 735 TGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTMLTGWRRDDVMD 794
Query: 795 KMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
KML E+FG CR+K Q+ F ++L ITGQ +E PFGFF R G++VE L
Sbjct: 795 KMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFARYGKYVECLLCV 854
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
S+R D EG V G FCF+Q+ +LQ AL Q L + ++K LAYIR++++NPL+GI
Sbjct: 855 SKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIRNPLSGII 914
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F K+LE +S+ E Q+ L TS C+RQ+ I+D DL I EG
Sbjct: 915 FSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEG 958
>gi|350536201|ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
Length = 1123
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/944 (53%), Positives = 655/944 (69%), Gaps = 33/944 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQ--ITAYLSKIQRGG 91
I+ + DA L A+FE+S G SF+YS SV ++ E P+ TAYL +IQ+G
Sbjct: 22 IVAQTSIDAKLHADFEES---GDSFDYSSSVRVTSVAGDEEKPKSDKVTTAYLHQIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
IQPFGC+LA++E T ++I +SEN EML + S + + + G IG D RT+FT PS
Sbjct: 79 FIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLG-IGTDIRTIFTGPS 137
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
GA+L KA E+SLLNP+LVH + KPFYAI+HR+ +++D EP K + ++ A
Sbjct: 138 GAALQKALGFGEVSLLNPVLVHCKNSG--KPFYAIVHRVTGSLILDFEPVKPYEVPMTAA 195
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FH+DDHGEVVSE
Sbjct: 196 GALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHEDDHGEVVSE 255
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A V V+Q ++L L L S
Sbjct: 256 ITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGS 315
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSP 374
TLR+PH CHLQYM NM SIASLVMAV++N D +LWGLVVCH+T+P
Sbjct: 316 TLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTP 375
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R++PFPLRYACEFL Q F++ + EL++ Q EKNILRTQ LLCDML+RDAP IV+QS
Sbjct: 376 RFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQS 435
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDLVKCDGAAL Y + +G+ P++ QL+DI WL H D TGLSTDSL +AG+P
Sbjct: 436 PNIMDLVKCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTDSTGLSTDSLYDAGFP 495
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GA LG AVCGMA RI+ KD+LFWFRSHTA EV+WGGAKH P KD+G KMHPRSSFKA
Sbjct: 496 GALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKA 555
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEVVK RS PW+ E++AIHSLQ+++R++F++ E N + + N K+ G+ EL
Sbjct: 556 FLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDAEVVNSNTNSIYKKLNDLKIDGMQELE 615
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SV EMVRLIETA PI VD G +NGWN K+AELTGLP EA+GK L+ +V + S
Sbjct: 616 SVTAEMVRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAIGKHLL-TLVEDSSVD 674
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V ++ AL G+E+KNVE +++ + S + ++VNAC S+D ++NV GVCF+ DI
Sbjct: 675 TVNKMLELALQGKEEKNVEFEIKTHGPSRDSSPISLIVNACASKDVRDNVVGVCFMAHDI 734
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K +MDKF R++GDY AIIQ+ +PLIPPIF +D+ CSEWN AM K+TGW R +V+
Sbjct: 735 TGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNTAMTKLTGWRRDDVMD 794
Query: 795 KMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
KML E+FG CR+K Q+ F ++L ITGQ +E PFGFF R G++VE L
Sbjct: 795 KMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAITGQESEKIPFGFFARYGKYVECLLCV 854
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
S+R D EG V G FCF+Q+ +LQ AL Q L + ++K LAYIR++++NPL+GI
Sbjct: 855 SKRLDKEGAVTGLFCFLQLASHELQQALYVQRLSEQTALKRLKVLAYIRRQIRNPLSGII 914
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F K+LE +S+ E Q+ L TS C+RQ+ I+D DL I +G
Sbjct: 915 FSRKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIDG 958
>gi|51556879|gb|AAU06210.1| phytochrome C [Triticum aestivum]
gi|51556881|gb|AAU06211.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1010 bits (2612), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/942 (53%), Positives = 653/942 (69%), Gaps = 32/942 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQRGGLIQP 95
++ DA L AEFE S + F+YS SV ++ ++AYL +QRG IQP
Sbjct: 26 VVAQTPVDARLHAEFE---GSQRHFDYSSSVSALNRSGASTSSAVSAYLQNMQRGRYIQP 82
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASLA 152
FGC+LA+ +F ++ YSEN E+LDL + D +G D RTLF S +L
Sbjct: 83 FGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVALH 142
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++S
Sbjct: 143 KAAVFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKS 200
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV++E RRSD
Sbjct: 201 YKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSD 260
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L QP+ L ST+R+P
Sbjct: 261 LEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDDNLSQPISLCGSTMRAP 320
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWGLVVCHHTSPRYIPF 379
HGCH QYM NMGSIASLVM++ IN D KLWGLVVCHHTSPR++PF
Sbjct: 321 HGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSPRFVPF 380
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++MD
Sbjct: 381 PLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 440
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL Y + ++G TP+E ++K I WLL H TGLSTDSL EAGYPGA+ L
Sbjct: 441 LVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGSTGLSTDSLLEAGYPGASAL 500
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEV 558
G+ VCGMA +I+SK F+FWFRSHTAKE+KWGGAKH P + DNG +MHPRSSF+AFLEV
Sbjct: 501 GEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDADDNGRRMHPRSSFRAFLEV 560
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELSS 615
VK RS PWE E++AIHSLQ+++R S Q+ E+ ND+ + + + K+QG+ EL
Sbjct: 561 VKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANDNNARSIVEAPSDDIKKIQGLLELKI 619
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETATAPI VD G INGWN KVAE+TGLP +EA+G L+D +V +S
Sbjct: 620 VTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEAIGMLLVD-LVEGDSVEV 678
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G E++N+E+KL+ Q+ V ++VNAC SRD + V GVCFV QD+T
Sbjct: 679 VKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCSRDLSDKVVGVCFVAQDLT 738
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
K++MDK+ R+QGDY AI+++ N LIPPIF ++ C EWN AM+K+TG R + I K
Sbjct: 739 GHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAIDK 798
Query: 796 MLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
+L E+F CR+K Q LTK IL+ I+GQ E FGFFN G+++E LTA+
Sbjct: 799 LLIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAFGFFNTDGKYMESLLTAN 858
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL YIRQE+KNPLNG++F
Sbjct: 859 KRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKELTYIRQELKNPLNGMQF 918
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
KLLE S ++E QRQ ++ C+ Q+ I+ DL IE+
Sbjct: 919 TRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
>gi|51556883|gb|AAU06212.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/942 (53%), Positives = 652/942 (69%), Gaps = 32/942 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQRGGLIQP 95
++ DA L AEFE S + F+YS SV ++ ++AYL +QRG IQP
Sbjct: 26 VVAQTPVDARLHAEFE---GSQRHFDYSSSVSALNRSGASTSSAVSAYLQNMQRGRYIQP 82
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASLA 152
FGC+LA+ +F ++ YSEN E+LDL + D +G D RTLF S +L
Sbjct: 83 FGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVALH 142
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++S
Sbjct: 143 KAAVFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKS 200
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV++E RRSD
Sbjct: 201 YKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSD 260
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ +L QP+ L ST+R+P
Sbjct: 261 LEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDDDLSQPISLCGSTMRAP 320
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSK-------------DSMKLWGLVVCHHTSPRYIPF 379
HGCH QYM NMGSIASLVM++ IN KLWGLVVCHHTSPR++PF
Sbjct: 321 HGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSPRFVPF 380
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++MD
Sbjct: 381 PLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 440
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL Y + ++G TP+E ++ I WLL H TGLSTDSL EAGYPGA+ L
Sbjct: 441 LVKCDGAALCYQNQIMVLGSTPSEGEITKIVAWLLECHDGSTGLSTDSLLEAGYPGASAL 500
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEV 558
G+ VCGMA +I+SK F+FWFRSHTAKE+KWGGAKH P + DNG +MHPRSSF+AFLEV
Sbjct: 501 GEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDADDNGRRMHPRSSFRAFLEV 560
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELSS 615
VK RS PWE E++AIHSLQ+++R S Q+ E+ ND+ + + + K+QG+ EL
Sbjct: 561 VKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANDNNARSIVEAPSDDIKKIQGLLELKI 619
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETATAPI VD G INGWN KVAE+TGLP +EA+G L+D +V +S
Sbjct: 620 VTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEAIGMLLVD-LVEGDSVEV 678
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G E++N+E+KL+ Q+ V ++VNAC SRD + V GVCFV QD+T
Sbjct: 679 VKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCSRDLSDKVVGVCFVAQDLT 738
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
K++MDK+ R+QGDY AI+++ N LIPPIF ++ C EWN AM+K+TG R + I K
Sbjct: 739 GHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAIDK 798
Query: 796 MLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
+L E+F CR+K Q LTK IL+ I+GQ E FGFFN G+++E LTA+
Sbjct: 799 LLIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAFGFFNTDGKYMESLLTAN 858
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL YIRQE+KNPLNG++F
Sbjct: 859 KRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKELTYIRQELKNPLNGMQF 918
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
KLLE S ++E QRQ ++ C+ Q+ I+ DL IE+
Sbjct: 919 TRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
>gi|51556885|gb|AAU06213.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/942 (53%), Positives = 653/942 (69%), Gaps = 32/942 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQRGGLIQP 95
++ DA L AEFE S + F+YS SV ++ ++AY+ +QRG IQP
Sbjct: 26 VVAQTPVDARLHAEFE---GSQRHFDYSSSVSALNRSGASTSSAVSAYIQNMQRGRYIQP 82
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASLA 152
FGC+LA+ +F ++ YSEN E+LDL + D +G D RTLF S +L
Sbjct: 83 FGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVALH 142
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++S
Sbjct: 143 KAAVFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKS 200
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV++E RRSD
Sbjct: 201 YKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSD 260
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L QP+ L ST+R+P
Sbjct: 261 LEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDDNLSQPISLCGSTMRAP 320
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWGLVVCHHTSPRYIPF 379
HGCH QYM NMGSIASLVM++ IN D KLWGLVVCHHTSPR++PF
Sbjct: 321 HGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSPRFVPF 380
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++MD
Sbjct: 381 PLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 440
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL Y + ++G TP+E ++K I WLL H TGLSTDSL EAGYPGA+ L
Sbjct: 441 LVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGSTGLSTDSLLEAGYPGASAL 500
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEV 558
G+ VCGMA +I+SK F+FWFRSHTAKE+KWGGAKH P + DNG +MHPRSSF+AFLEV
Sbjct: 501 GEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDADDNGRRMHPRSSFRAFLEV 560
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELSS 615
VK RS PWE E++AIHSLQ+++R S Q+ E+ ND+ + + + K+QG+ EL
Sbjct: 561 VKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANDNNARSIVEAPSDDIKKIQGLLELKI 619
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETATAPI VD G INGWN KVAE+TGLP +EA+G L+D +V +S
Sbjct: 620 VTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEAIGMLLVD-LVEGDSVEV 678
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G E++N+E+KL+ Q+ V ++VNAC SRD + V GVCFV QD+T
Sbjct: 679 VKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCSRDLSDKVVGVCFVAQDLT 738
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
K++MDK+ R+QGDY AI+++ N LIPPIF ++ C EWN AM+K+TG R + I K
Sbjct: 739 GHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAIDK 798
Query: 796 MLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
+L E+F CR+K Q LTK IL+ I+GQ E FGFFN G+++E LTA+
Sbjct: 799 LLIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAFGFFNTDGKYMESLLTAN 858
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL YIRQE+KNPLNG++F
Sbjct: 859 KRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKELTYIRQELKNPLNGMQF 918
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
KLLE S ++E QRQ ++ C+ Q+ I+ DL IE+
Sbjct: 919 TRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
>gi|51556887|gb|AAU06214.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/941 (53%), Positives = 647/941 (68%), Gaps = 30/941 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQRGGLIQP 95
++ DA L AEFE S + F+YS SV ++ ++AYL +QRG IQP
Sbjct: 26 VVAQTPVDARLHAEFE---GSQRHFDYSSSVSALNRSGASTSSAVSAYLQNMQRGRYIQP 82
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASLA 152
FGC+LA+ +F ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 83 FGCLLAIHSESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVALH 142
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++S
Sbjct: 143 KAAVFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKS 200
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV++E RRSD
Sbjct: 201 YKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSD 260
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L QP+ L ST+R+P
Sbjct: 261 LEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDDNLSQPISLCGSTMRAP 320
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSK-------------DSMKLWGLVVCHHTSPRYIPF 379
HGCH QYM NMGSIASLVM++ IN KLWGLVVCHHTSPR++PF
Sbjct: 321 HGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSPRFVPF 380
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++MD
Sbjct: 381 PLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 440
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL Y + ++G TP+E ++K I WLL H TGLSTDSL EAGYPGA+ L
Sbjct: 441 LVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGSTGLSTDSLLEAGYPGASAL 500
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEV 558
G+ VCGMA +I+SK F+FWFRSHTAKE+KWGGAK P + DNG +MHPRSSF+AFLEV
Sbjct: 501 GEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKQEPGDADDNGRRMHPRSSFRAFLEV 560
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEME--EENDSKVQGNTQQNGSKMQGVDELSSV 616
VK RS PWE E++AIHSLQ+++R S Q+ + + N + + K+QG+ EL V
Sbjct: 561 VKWRSVPWEDVEMDAIHSLQLILRGSLQDEDATDNNAGSIVEAPSDDIKKIQGLLELRIV 620
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
EMVRLIETATAPI VD G INGWN KVAE+TGLP +EA+G L+D +V +S V
Sbjct: 621 TNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEAIGMLLVD-LVEGDSVEVV 679
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
+ ++ AL G E++N+E+KL+ F Q+ V ++VNAC SRD V GVC V QD+T
Sbjct: 680 KQMLNSALQGTEEQNLEIKLKTFHQQESKGPVVLMVNACCSRDLSEKVVGVCLVAQDLTG 739
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
K++MDK+ R+QGDY AI+++ N LIPPIF ++ C EWN AM+K+TG R + I K+
Sbjct: 740 HKMIMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAIDKL 799
Query: 797 LPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASR 853
L E+F CR+K Q LTK IL+ I+GQ E FGFFN G+++E LTA++
Sbjct: 800 LIGEVFTLHDYGCRVKDQATLTKLSILMNTVISGQEPEKLAFGFFNTDGKYMESLLTANK 859
Query: 854 RTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFV 913
RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL YIRQE+KNPLNG++F
Sbjct: 860 RTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKELTYIRQELKNPLNGMQFT 919
Query: 914 HKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
KLLE S ++E QRQ ++ C+ Q+ I+ DL IE+
Sbjct: 920 RKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
>gi|357115337|ref|XP_003559446.1| PREDICTED: phytochrome C-like [Brachypodium distachyon]
Length = 1140
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/957 (52%), Positives = 656/957 (68%), Gaps = 34/957 (3%)
Query: 23 KSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPE--GVPEEQI 80
+ S A+ K + ++ DA L AEFE S + F+YS SV + +
Sbjct: 14 RGSSARSK---HSERVVAQTPVDARLHAEFE---GSQRRFDYSSSVSAANRSGASTSTAV 67
Query: 81 TAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGI 137
+AYL +QRG IQPFGC+LA TF ++ YSEN EMLDL + D +G+
Sbjct: 68 SAYLQNMQRGRYIQPFGCLLAAHPETFALLAYSENAAEMLDLTPHAVPTIDQRDALTVGV 127
Query: 138 DARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPS 197
D RTLF S +L KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP
Sbjct: 128 DVRTLFRSQSAVALHKAAVFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPV 185
Query: 198 KSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFH 257
D ++ AGA++S KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH
Sbjct: 186 NPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFH 245
Query: 258 DDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKE 317
+D+HGEV++E RRSDLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A+PV +IQ
Sbjct: 246 EDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAAVPVKLIQDDN 305
Query: 318 LKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLW 364
L QP+ L ST+R+PHGCH QYM NMGS+ASLVM++ IN + KLW
Sbjct: 306 LSQPISLCGSTMRAPHGCHAQYMANMGSVASLVMSITINEDEEEDGDTGSDQQPKGRKLW 365
Query: 365 GLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLR 424
GLVVCHH+SPR++PFPLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLR
Sbjct: 366 GLVVCHHSSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLR 425
Query: 425 DAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLS 484
DAP I TQSP++MDLVKCDGAAL Y + ++G TP+E ++K+I WL H TGLS
Sbjct: 426 DAPIGIFTQSPNVMDLVKCDGAALCYRNQIMVLGSTPSEGEIKNIVAWLQEYHDGSTGLS 485
Query: 485 TDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNG 543
TDSL EAGYPGA+ LG+ VCGMA +I+SK F+ WFRSHTAKE+KWGGAKH P + DNG
Sbjct: 486 TDSLVEAGYPGASALGEIVCGMAAIKISSKGFILWFRSHTAKEIKWGGAKHEPGDADDNG 545
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ-- 601
KMHPRSSF+AFLEVVK RS PWE E++AIHSLQ+++R S Q+ + N++ V +
Sbjct: 546 RKMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANNNNNVMSIVEAP 605
Query: 602 -QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMG 660
+ K+QG+ EL V EMVRLIETATAPI VD G INGWN K AE+TGLP +EA+G
Sbjct: 606 SDDMKKIQGLLELRIVTNEMVRLIETATAPILAVDIVGNINGWNNKAAEITGLPTTEAIG 665
Query: 661 KSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDY 720
L+ +VVH +S V ++ AL G E++N+E+KL+ F + + V ++VNAC SRD
Sbjct: 666 MPLV-QVVHGDSVEVVTQILNSALQGVEEQNLEIKLKTFHHLESNGPVILMVNACCSRDL 724
Query: 721 KNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAA 780
V GVCFV QD+T +K+++DK+ R+QGDY AI+++ N LIPPIF ++ C EWN A
Sbjct: 725 SEKVVGVCFVAQDLTGQKMILDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEA 784
Query: 781 MEKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGF 837
M+++TG R + I K+L E+F CR+K LTK IL+ I+GQ E PFGF
Sbjct: 785 MQRITGIKREDAIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNTVISGQDPEKLPFGF 844
Query: 838 FNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELA 897
F+ G+ +E LTA++RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL
Sbjct: 845 FDADGKCMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKELT 904
Query: 898 YIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
YIRQE+KNPLNG++F LLE S ++E QRQ L ++ C+ Q+ I+ DL IE+
Sbjct: 905 YIRQELKNPLNGMQFTRNLLEPSELTEEQRQLLASNVLCQEQLKKILHDNDLEGIEQ 961
>gi|119926110|emb|CAC82798.2| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1008 bits (2606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/942 (53%), Positives = 653/942 (69%), Gaps = 32/942 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQRGGLIQP 95
++ DA L AEFE S + F+YS SV ++ ++AY+ +QRG IQP
Sbjct: 26 VVAQTPVDARLHAEFE---GSQRHFDYSSSVSALNRSGASTSSAVSAYIQNMQRGRYIQP 82
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASLA 152
FGC+LA+ +F ++ YSEN E+LDL + D +G D RTLF S +L
Sbjct: 83 FGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVALH 142
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++S
Sbjct: 143 KAAVFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKS 200
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV++E RRSD
Sbjct: 201 YKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSD 260
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L QP+ L ST+R+P
Sbjct: 261 LEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDDNLSQPISLCGSTMRAP 320
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWGLVVCHHTSPRYIPF 379
HGCH QYM NMGSIASLVM++ IN D KLWGLVVCHHTSPR++PF
Sbjct: 321 HGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSPRFVPF 380
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++MD
Sbjct: 381 PLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 440
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL Y + ++G TP+E ++K I WLL H TGLSTDSL EAGYPGA+ L
Sbjct: 441 LVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGSTGLSTDSLLEAGYPGASAL 500
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEV 558
G+ VCGMA +I+SK F+FWFRSHTAKE+KWGGAKH P + DNG +MHPRSSF+AFLEV
Sbjct: 501 GEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDADDNGRRMHPRSSFRAFLEV 560
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELSS 615
VK RS PWE E++AIHSLQ+++R S Q+ E+ ND+ + + + K+QG+ EL
Sbjct: 561 VKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANDNNARSIVEAPSDDIKKIQGLLELKI 619
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETATAPI VD G INGWN KVAE+TGLP +EA+G L+D +V +S
Sbjct: 620 VTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEAIGMLLVD-LVEGDSVEV 678
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G E++N+E+KL+ Q+ V ++VNAC SRD + V GVCFV QD+T
Sbjct: 679 VKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCSRDLSDKVVGVCFVAQDLT 738
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
K++MDK+ R+QGDY AI+++ N LIPPIF ++ C EWN AM+K+TG R + I K
Sbjct: 739 GHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAIDK 798
Query: 796 MLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
++ E+F CR+K Q LTK IL+ I+GQ E FGFFN G+++E LTA+
Sbjct: 799 LVIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAFGFFNTDGKYMESLLTAN 858
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL YIRQE+KNPLNG++F
Sbjct: 859 KRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKELTYIRQELKNPLNGMQF 918
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
KLLE S ++E QRQ ++ C+ Q+ I+ DL IE+
Sbjct: 919 TRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
>gi|77963970|gb|ABB13327.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1139
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/942 (53%), Positives = 656/942 (69%), Gaps = 32/942 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQRGGLIQP 95
++ DA L AEFE +S + F+YS SV ++ ++A+L +QRG IQP
Sbjct: 26 VVAQTPVDAQLHAEFE---SSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQRGRYIQP 82
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASLA 152
FGC+LA+ +F ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 83 FGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVALH 142
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++S
Sbjct: 143 KAAVFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKS 200
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV++E RRSD
Sbjct: 201 YKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSD 260
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L QP+ L ST+R+P
Sbjct: 261 LEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPISLCGSTMRAP 320
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWGLVVCHHTSPRYIPF 379
HGCH QYM NMGSIASLVM+V +N D KLWGLVVCHHTSPR++PF
Sbjct: 321 HGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSPRFVPF 380
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++MD
Sbjct: 381 PLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 440
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL Y + ++G P+E ++K IA WLL H TGLSTDSL EAGYPGA+ L
Sbjct: 441 LVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYPGASAL 500
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEV 558
G+ VCGMA +I+SK F+FWFRSHTAKE+KW GAKH P + DNG +MHPRSSF+AFLEV
Sbjct: 501 GEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFRAFLEV 560
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELSS 615
VK RS PWE E++AIHSLQ+++R S Q+ E+ ND+ V+ + + K+QG+ EL
Sbjct: 561 VKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANDNNVRSIVEAPSDDVRKIQGLLELRI 619
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETATAPI VD G+INGWN KVAE+TGLP +EA+G L+D +V +S
Sbjct: 620 VTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVD-LVEGDSVEV 678
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
++ ++ A+ G E++N E+KL+ F Q+ + V ++VNAC SRD + V GVCFV QD+T
Sbjct: 679 IKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGVCFVAQDLT 738
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
K++MDK+ ++QGDY AI+++ N LIPPIF ++ C EWN AM+K+TG R + I K
Sbjct: 739 GHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAIDK 798
Query: 796 MLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
+L E+F CR+K Q +TK IL+ I+GQ E FGFF+ G+++E LTA+
Sbjct: 799 LLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLLTAN 858
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL YIRQE+KNPLNG++F
Sbjct: 859 KRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNGMQF 918
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
KLLE S ++E QRQ ++ C+ Q+ I+ DL IE+
Sbjct: 919 TRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
>gi|130188|sp|P15001.1|PHYA_PEA RecName: Full=Phytochrome A
gi|169132|gb|AAA33682.1| phytochrome [Pisum sativum]
gi|295830|emb|CAA32242.1| phytochrome apoprotein [Pisum sativum]
gi|51173514|gb|AAT97643.1| phytochrome A apoprotein [Pisum sativum]
gi|226757|prf||1604466A phytochrome
Length = 1124
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/961 (51%), Positives = 665/961 (69%), Gaps = 28/961 (2%)
Query: 18 NTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVI---SPPEG 74
T P +SS+ + N + II DA L A FE+S +S + R +
Sbjct: 3 TTRPSQSSNNSGRSRNSAR-IIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGDQQP 61
Query: 75 VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
+ TAYL+ IQRG IQPFGC+LA++E T +++ YSEN EML + S + D
Sbjct: 62 RSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
G IG D RT+FT PS ++L KA E+SLLNPILVH + KPFYAI+HR+ +
Sbjct: 122 ALG-IGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSG--KPFYAIIHRVTGSL 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
+ID EP K + ++ AGA+QS KLA AI+RLQ+L G + LCDT+V++V +LTGYDR
Sbjct: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEV++EI + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V
Sbjct: 239 VMAYKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHV 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------- 359
V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N D
Sbjct: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLP 358
Query: 360 --SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVL 417
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ L
Sbjct: 359 QKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTL 418
Query: 418 LCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNH 477
LCDML+RDAP IV+QSP+IMDLVKCDGAAL+Y + WL+G TPTESQL++IA W+ H
Sbjct: 419 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTESQLREIALWMSEYH 478
Query: 478 GDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP 537
D TGLSTDSL++AG+PGA L VCGMA RITSKD +FWFRSHTA E++WGGAKH P
Sbjct: 479 TDSTGLSTDSLSDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEP 538
Query: 538 EHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQ 597
+D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++ ++ + + +
Sbjct: 539 GDQDDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKA 598
Query: 598 GNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASE 657
NT+ N K++G+ EL +V EMVRLIETAT PI VD GT+NGWN K+AELTGLP E
Sbjct: 599 INTRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGE 658
Query: 658 AMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTS 717
A+GK L+ +V + S V+ ++ AL GEE+KNV+ +++ Q + + ++VNAC S
Sbjct: 659 AIGKHLL-TLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVESGPISLIVNACAS 717
Query: 718 RDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
+D + NV GVCFV QDIT +K +MDKF R++GDY+AI+Q+ N LIPPIF +DE C EW
Sbjct: 718 KDLRENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEW 777
Query: 778 NAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFP 834
NAAM K+TGW R EV+ KML E+FG + CR+K Q+ F I+L + +TG TE P
Sbjct: 778 NAAMIKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVP 837
Query: 835 FGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIK 894
FGFF+R+G++VE L+ S++ DAEG V G FCF+Q+ P+LQ AL Q L + ++K
Sbjct: 838 FGFFSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLK 897
Query: 895 ELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
L Y++++++NPL GI F K+LE + + Q++ + TS C+RQ+ I+D DL I +
Sbjct: 898 VLTYMKRQIRNPLAGIVFSSKMLEGTDLETEQKRIVNTSSQCQRQLSKILDDSDLDGIID 957
Query: 955 G 955
G
Sbjct: 958 G 958
>gi|82491942|gb|ABB77851.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1147
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/942 (53%), Positives = 656/942 (69%), Gaps = 32/942 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQRGGLIQP 95
++ DA L AEFE +S + F+YS SV ++ ++A+L +QRG IQP
Sbjct: 26 VVAQTPVDAQLHAEFE---SSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQRGRYIQP 82
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASLA 152
FGC+LA+ +F ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 83 FGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVALH 142
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++S
Sbjct: 143 KAAVFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKS 200
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV++E RRSD
Sbjct: 201 YKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSD 260
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L QP+ L ST+R+P
Sbjct: 261 LEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPISLCGSTMRAP 320
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWGLVVCHHTSPRYIPF 379
HGCH QYM NMGSIASLVM+V +N D KLWGLVVCHHTSPR++PF
Sbjct: 321 HGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSPRFVPF 380
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++MD
Sbjct: 381 PLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 440
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL Y + ++G P+E ++K IA WLL H TGLSTDSL EAGYPGA+ L
Sbjct: 441 LVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYPGASAL 500
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEV 558
G+ VCGMA +I+SK F+FWFRSHTAKE+KW GAKH P + DNG +MHPRSSF+AFLEV
Sbjct: 501 GEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFRAFLEV 560
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELSS 615
VK RS PWE E++AIHSLQ+++R S Q+ E+ ND+ V+ + + K+QG+ EL
Sbjct: 561 VKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANDNNVRSIVEAPSDDVRKIQGLLELRI 619
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETATAPI VD G+INGWN KVAE+TGLP +EA+G L+D +V +S
Sbjct: 620 VTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVD-LVEGDSVEV 678
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
++ ++ A+ G E++N E+KL+ F Q+ + V ++VNAC SRD + V GVCFV QD+T
Sbjct: 679 IKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGVCFVAQDLT 738
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
K++MDK+ ++QGDY AI+++ N LIPPIF ++ C EWN AM+K+TG R + I K
Sbjct: 739 GHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAIDK 798
Query: 796 MLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
+L E+F CR+K Q +TK IL+ I+GQ E FGFF+ G+++E LTA+
Sbjct: 799 LLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLLTAN 858
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL YIRQE+KNPLNG++F
Sbjct: 859 KRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNGMQF 918
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
KLLE S ++E QRQ ++ C+ Q+ I+ DL IE+
Sbjct: 919 TRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
>gi|51556877|gb|AAU06209.1| phytochrome C [Triticum spelta]
Length = 1139
Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/942 (53%), Positives = 653/942 (69%), Gaps = 32/942 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQRGGLIQP 95
++ DA L AEFE S + F+YS SV ++ ++AYL +QRG IQP
Sbjct: 26 VVAQTPVDARLHAEFE---GSQRHFDYSSSVSALNRSGASTSSAVSAYLQNMQRGRYIQP 82
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASLA 152
FGC+LA+ +F ++ Y+EN E+LDL + D +G D RTLF S +L
Sbjct: 83 FGCLLAIHPESFALLAYNENAAEILDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVALH 142
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++S
Sbjct: 143 KAAVFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKS 200
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV++E RRSD
Sbjct: 201 YKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSD 260
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L QP+ L ST+R+P
Sbjct: 261 LEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDDNLSQPISLCGSTMRAP 320
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWGLVVCHHTSPRYIPF 379
HGCH QYM NMGSIASLVM++ IN D KLWGLVVCHHTSPR++PF
Sbjct: 321 HGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSPRFVPF 380
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++MD
Sbjct: 381 PLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 440
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL Y + ++G TP+E ++K I WLL H TGLSTDSL EAGYPGA+ L
Sbjct: 441 LVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGSTGLSTDSLLEAGYPGASAL 500
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEV 558
G+ VCGMA +I+SK F+FWFRSHTAKE+KWGGAKH P + DNG +MHPRSSF+AFLEV
Sbjct: 501 GEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDADDNGRRMHPRSSFRAFLEV 560
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELSS 615
VK RS PWE E++AIHSLQ+++R S Q+ E+ ND+ + + + K+QG+ EL
Sbjct: 561 VKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANDNNARSIVEAPSDDIKKIQGLLELKI 619
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETATAPI VD G I+GWN KVAE+TGLP +EA+G L+D +V +S
Sbjct: 620 VTNEMVRLIETATAPILAVDIVGNISGWNNKVAEITGLPTTEAIGMLLVD-LVEGDSVEV 678
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G E++N+E+KL+ Q+ V ++VNAC SRD + V GVCFV QD+T
Sbjct: 679 VKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCSRDLSDKVVGVCFVAQDLT 738
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
K++MDK+ R+QGDY AI+++ N LIPPIF ++ C EWN AM+K+TG R + I K
Sbjct: 739 GHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAIDK 798
Query: 796 MLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
+L E+F CR+K Q LTK IL+ I+GQ E FGFFN G+++E LTA+
Sbjct: 799 LLIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAFGFFNTDGKYMESLLTAN 858
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL YIRQE+KNPLNG++F
Sbjct: 859 KRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKELTYIRQELKNPLNGMQF 918
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
KLLE S ++E QRQ ++ C+ Q+ I+ DL IE+
Sbjct: 919 TRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
>gi|77963968|gb|ABB13326.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1139
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/942 (53%), Positives = 655/942 (69%), Gaps = 32/942 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQRGGLIQP 95
++ DA L AEFE +S + F+YS SV ++ ++A+L +QRG IQP
Sbjct: 26 VVAQTPVDAQLHAEFE---SSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQRGRYIQP 82
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASLA 152
FGC+LA+ +F ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 83 FGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVALH 142
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++S
Sbjct: 143 KAAVFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKS 200
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV++E RRSD
Sbjct: 201 YKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSD 260
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +I L QP+ L ST+R+P
Sbjct: 261 LEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIHDGNLSQPISLCGSTMRAP 320
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWGLVVCHHTSPRYIPF 379
HGCH QYM NMGSIASLVM+V +N D KLWGLVVCHHTSPR++PF
Sbjct: 321 HGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSPRFVPF 380
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++MD
Sbjct: 381 PLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 440
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL Y + ++G P+E ++K IA WLL H TGLSTDSL EAGYPGA+ L
Sbjct: 441 LVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYPGASAL 500
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEV 558
G+ VCGMA +I+SK F+FWFRSHTAKE+KW GAKH P + DNG +MHPRSSF+AFLEV
Sbjct: 501 GEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFRAFLEV 560
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELSS 615
VK RS PWE E++AIHSLQ+++R S Q+ E+ ND+ V+ + + K+QG+ EL
Sbjct: 561 VKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANDNNVRSIVEAPSDDVRKIQGLLELRI 619
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETATAPI VD G+INGWN KVAE+TGLP +EA+G L+D +V +S
Sbjct: 620 VTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVD-LVEGDSVEV 678
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
++ ++ A+ G E++N E+KL+ F Q+ + V ++VNAC SRD + V GVCFV QD+T
Sbjct: 679 IKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGVCFVAQDLT 738
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
K++MDK+ ++QGDY AI+++ N LIPPIF ++ C EWN AM+K+TG R + I K
Sbjct: 739 GHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAIDK 798
Query: 796 MLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
+L E+F CR+K Q +TK IL+ I+GQ E FGFF+ G+++E LTA+
Sbjct: 799 LLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLLTAN 858
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL YIRQE+KNPLNG++F
Sbjct: 859 KRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNGMQF 918
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
KLLE S ++E QRQ ++ C+ Q+ I+ DL IE+
Sbjct: 919 TRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
>gi|37926897|gb|AAP06790.1| phytochrome C1 apoprotein [Zea mays]
gi|414872852|tpg|DAA51409.1| TPA: phytochromeC1 [Zea mays]
Length = 1135
Score = 1005 bits (2599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/967 (52%), Positives = 662/967 (68%), Gaps = 34/967 (3%)
Query: 12 SIGGGHNTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-IS 70
S+ + T +SS A+ K ++ DA L AEFE S + F+YS SV +
Sbjct: 2 SLPSNNRRTCSRSSSARSK---HSARVVAQTPVDAQLHAEFE---GSQRHFDYSSSVGAA 55
Query: 71 PPEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDF- 129
++ YL +QRG IQPFGC+LAV TF ++ YSEN EMLDL +
Sbjct: 56 NRPSASTSTVSTYLQNMQRGRYIQPFGCLLAVHPDTFALLAYSENAPEMLDLTPHAVPTI 115
Query: 130 -ELNGL-IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
+ + L IG+D RTLF S +L KAAA E++LLNPILVH+ R+ KPFYAILHRID
Sbjct: 116 DQRDALGIGVDVRTLFRSQSSVALHKAAAFGEVNLLNPILVHA--RTSGKPFYAILHRID 173
Query: 188 VGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTG 247
VG+VIDLEP D ++ AGA++S KLA AISRLQ+LP G++ LLCD +V +V +LTG
Sbjct: 174 VGLVIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTG 233
Query: 248 YDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHA 307
YDRVM Y F++D+HGEV+SE RRSDLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A
Sbjct: 234 YDRVMAYKFYEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCCA 293
Query: 308 IPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------- 360
PV VIQ L QPL L STLR+ HGCH QYM NMGS+ASL M+V IN +
Sbjct: 294 TPVKVIQDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLAMSVTINEDEEEDGDTGS 353
Query: 361 ------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRT 414
KLWGLVVCHHTSPR++PFPLRYACEFL+Q F +QL E+++A Q E++ILRT
Sbjct: 354 DQQPKGRKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRT 413
Query: 415 QVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLL 474
Q LLCDMLLRDAP I T+SP++MDLVKCDGAALYY + ++G TP+ES++K IA WL
Sbjct: 414 QTLLCDMLLRDAPVGIFTRSPNVMDLVKCDGAALYYQNQLLVLGSTPSESEIKSIATWLQ 473
Query: 475 NNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAK 534
+NH TGLSTDSL EAGYPGA L + VCGMA +I+SKDF+FWFRSHT KE+KWGGAK
Sbjct: 474 DNHDGSTGLSTDSLVEAGYPGAVALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAK 533
Query: 535 HHP-EHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEND 593
H P + D+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S + E+ N
Sbjct: 534 HEPVDADDDGRRMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLPD-EDANR 592
Query: 594 SKVQGNTQ---QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAEL 650
+ V+ + + K+QG+ EL +V EMVRLIETATAP+ VD +G INGWN K AEL
Sbjct: 593 NNVRSIVKAPSDDMKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAEL 652
Query: 651 TGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYI 710
TGLP EA+G+ LID VV +S V+ ++ AL G E++N+E+KL+ F + + V +
Sbjct: 653 TGLPVMEAIGRPLIDLVV-TDSIEVVKQILDSALQGIEEQNMEIKLKTFHEHECNGPVIL 711
Query: 711 LVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDE 770
VN+C SRD V GVCFV QD+T +K++MDK+ R+QGDY AI+++ LIPPIF ++
Sbjct: 712 KVNSCCSRDLSEKVIGVCFVAQDLTRQKMIMDKYTRIQGDYVAIVKNPTELIPPIFMIND 771
Query: 771 NACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITG 827
C EWN AM+K+TG R + I K+L E+F CR+K LTK IL+ I+G
Sbjct: 772 LGSCLEWNKAMQKITGIKREDAINKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISG 831
Query: 828 QGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDM 887
Q E FGFF+ G+++E LT ++RTDAEGK+ G CF+ + P+LQ AL+ Q + +
Sbjct: 832 QDPEKLFFGFFDTDGKYIESLLTVNKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQ 891
Query: 888 DIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGM 947
KEL YIRQE++NPLNG++F LL+ S ++E QRQ L ++ C+ Q+ I+
Sbjct: 892 AATNSFKELTYIRQELRNPLNGMQFTCNLLKPSELTEEQRQLLSSNVLCQDQLKKILHDT 951
Query: 948 DLRCIEE 954
DL IE+
Sbjct: 952 DLESIEQ 958
>gi|326491833|dbj|BAJ98141.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1147
Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/942 (53%), Positives = 654/942 (69%), Gaps = 32/942 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQITAYLSKIQRGGLIQP 95
++ DA L AEFE +S + F+YS SV ++ ++A+L +QRG IQP
Sbjct: 26 VVAQTPVDAQLHAEFE---SSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQRGRYIQP 82
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASLA 152
FGC+LA+ +F ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 83 FGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSAVALH 142
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++S
Sbjct: 143 KAAVFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAAGALKS 200
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV++E RRSD
Sbjct: 201 YKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAECRRSD 260
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L QP+ L ST+R+P
Sbjct: 261 LEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPISLCGSTMRAP 320
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSK-------------DSMKLWGLVVCHHTSPRYIPF 379
HGCH QYM NMGSIASLVM+V +N KLWGLVVCHHTSPR++P
Sbjct: 321 HGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSPRFVPS 380
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++MD
Sbjct: 381 PLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 440
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL Y + ++G P+E ++K IA WLL H TGLSTDSL EAGYPGA+ L
Sbjct: 441 LVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYPGASAL 500
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLEV 558
G+ VCGMA +I+SK F+FWFRSHTAKE+KW GAKH P + DNG +MHPRSSF+AFLEV
Sbjct: 501 GEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFRAFLEV 560
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELSS 615
VK RS PWE E++AIHSLQ+++R S Q+ E+ ND+ V+ + + K+QG+ EL
Sbjct: 561 VKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANDNNVRSIVEAPSDDVRKIQGLLELRI 619
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETATAPI VD G+INGWN KVAE+TGLP +EA+G L+D +V +S
Sbjct: 620 VTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVD-LVEGDSVEV 678
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
++ ++ A+ G E++N E+KL+ F Q+ + V ++VNAC SRD + V GVCFV QD+T
Sbjct: 679 IKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGVCFVAQDLT 738
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
K++MDK+ ++QGDY AI+++ N LIPPIF ++ C EWN AM+K+TG R + I K
Sbjct: 739 GHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGIKREDAIDK 798
Query: 796 MLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
+L E+F CR+K Q +TK IL+ I+GQ E FGFF+ G+++E LTA+
Sbjct: 799 LLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKYMESLLTAN 858
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL YIRQE+KNPLNG++F
Sbjct: 859 KRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELKNPLNGMQF 918
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
KLLE S ++E QRQ ++ C+ Q+ I+ DL IE+
Sbjct: 919 TRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
>gi|225450405|ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
gi|147838424|emb|CAN76586.1| hypothetical protein VITISV_020287 [Vitis vinifera]
gi|183239014|gb|ACC60965.1| phytochrome A [Vitis vinifera]
gi|296089871|emb|CBI39690.3| unnamed protein product [Vitis vinifera]
Length = 1124
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/940 (52%), Positives = 654/940 (69%), Gaps = 26/940 (2%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVP--EEQITAYLSKIQRGGLIQP 95
II DA L A+FE+S +S + R + + P ++ TAYL IQ+G LIQP
Sbjct: 22 IIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHIQKGKLIQP 81
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASL 151
FG +LA++E TF++I YSEN EML + S + + + G IG D RT+F+ PS ++L
Sbjct: 82 FGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLG-IGTDVRTIFSGPSASAL 140
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KA E+SLLNPILVH + KPFYAI+HR+ ++ID EP K + ++ AGA+Q
Sbjct: 141 HKALGFGEVSLLNPILVHCKTSG--KPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQ 198
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEVVSEI +
Sbjct: 199 SYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKP 258
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A + V+Q ++L L L STLR+
Sbjct: 259 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRA 318
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIP 378
PH CH+QYM NM SIASLVMAV++N D +LWGLVVCHHT+PR++P
Sbjct: 319 PHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVP 378
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+RDAP IV+QSP++M
Sbjct: 379 FPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVM 438
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAAL Y + W +G+TP++ QL DI WL H D TGLSTDSL +AGYPGA
Sbjct: 439 DLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALA 498
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG AVCGMA +ITSKD LFWFRSHTA EV+WGGAKH P KD+G KMHPRSSFKAFLEV
Sbjct: 499 LGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEV 558
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK RS PW+ E++AIHSLQ+++R++F++ E + + +T+ N K++G+ EL +V
Sbjct: 559 VKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAVTS 618
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETA+ PI VD G +NGWN K++ELT LP +A+G L+ +V + S V+
Sbjct: 619 EMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLL-TLVEDSSADTVKK 677
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
++ AL G+E++NV+ +++ ++ + ++VNAC SRD NV GVCFV QDIT +K
Sbjct: 678 MLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLHENVVGVCFVAQDITSQK 737
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
+MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN AM K++GW R EV+ KML
Sbjct: 738 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLL 797
Query: 799 REIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRT 855
E+FG CR+K ++ I+L +TG+ +E FGFF++ G++VE L+ S++
Sbjct: 798 GEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLSVSKKL 857
Query: 856 DAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHK 915
D EG V G FCF+Q+ +LQ AL Q L + ++K LAYI++++KNPL+GI F K
Sbjct: 858 DREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGIIFSRK 917
Query: 916 LLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
++E + + E Q+Q L TS C+RQ+ I+D DL I EG
Sbjct: 918 MMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEG 957
>gi|212722792|ref|NP_001131622.1| uncharacterized protein LOC100192976 [Zea mays]
gi|37926916|gb|AAP06791.1| phytochrome C2 apoprotein [Zea mays]
gi|413933056|gb|AFW67607.1| phytochromeC2 [Zea mays]
Length = 1135
Score = 1002 bits (2590), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/955 (52%), Positives = 652/955 (68%), Gaps = 32/955 (3%)
Query: 23 KSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEGVPEEQIT 81
+SS A+ K ++ DA L A+FE S + F+YS SV + ++
Sbjct: 13 RSSSARSK---HSARVVAQTPVDAQLHADFE---GSQRHFDYSSSVGAANRPSASTSTVS 66
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGID 138
YL +QRG IQPFGC+LAV TF ++ YSEN EMLDL + D IG D
Sbjct: 67 TYLQNMQRGRYIQPFGCLLAVHPDTFALLAYSENAPEMLDLTPHAVPTIDQRDALTIGAD 126
Query: 139 ARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSK 198
RTLF S +L KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP
Sbjct: 127 VRTLFRSQSSVALHKAATFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPFN 184
Query: 199 SGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHD 258
D ++ AGA++S KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+
Sbjct: 185 PADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHE 244
Query: 259 DDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKEL 318
D+HGEV+SE RRSDLEPYLG+H+PA DIPQA+RFLF +N++RMICD A PV++IQ L
Sbjct: 245 DEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKMRMICDFSATPVLIIQDGSL 304
Query: 319 KQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWG 365
QP+ L STLR+ HGCH QYM NMGS+ASLVM+V IN + KLWG
Sbjct: 305 AQPVSLCGSTLRASHGCHAQYMANMGSVASLVMSVTINDDEEEDGDTDSDQQPKGRKLWG 364
Query: 366 LVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRD 425
LVVCHHTSPR++PFPLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRD
Sbjct: 365 LVVCHHTSPRFVPFPLRYACEFLLQVFGIQLSKEVELAAQAKERHILRTQTLLCDMLLRD 424
Query: 426 APFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLST 485
A I TQSP++MDLVKCDGAALYY + ++G TP+ES++K IA WL NH TGLST
Sbjct: 425 ALVGIFTQSPNVMDLVKCDGAALYYQNQVLVLGSTPSESEIKSIATWLQENHDGSTGLST 484
Query: 486 DSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGG 544
DSL EAGYPGAA L + VCGM +I+SK+F+FWFRSHT KE+KW GAKH P + DNG
Sbjct: 485 DSLVEAGYPGAAALREVVCGMVAIKISSKNFIFWFRSHTTKEIKWSGAKHEPFDADDNGR 544
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ--EMEEENDSKVQGNTQQ 602
KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++RDS Q + N +
Sbjct: 545 KMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRDSLQGEDANRNNIRSIVKAPSD 604
Query: 603 NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKS 662
+ K+QG+ EL +V EMVRLIETATAP+ VD +G INGWN K AELTGLP EA+G+
Sbjct: 605 DMKKLQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNKKAAELTGLPVMEAIGRP 664
Query: 663 LIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKN 722
LID VV +S V+ ++ AL G E++N+E+KL+ F Q+ V +++N+C SRD
Sbjct: 665 LIDLVV-ADSVEVVKQILDSALQGIEEQNLEIKLKTFHEQECCGPVILMINSCCSRDLSE 723
Query: 723 NVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAME 782
V GVCFV QD+T +K++MDK+ R+QGDY AII++ + LIPPIF ++ C EWN AM+
Sbjct: 724 KVIGVCFVAQDLTRQKMIMDKYTRIQGDYVAIIKNPSELIPPIFMINDLGSCLEWNKAMQ 783
Query: 783 KVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFN 839
K+TG R + I K+L E+F CR+K LTK IL+ I+GQ E FGFF
Sbjct: 784 KITGMKREDAINKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFG 843
Query: 840 RQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYI 899
G+++E LT ++RT+AEGK+ G CF+ + P+LQ ALE Q + + KEL YI
Sbjct: 844 TGGKYIESLLTVNKRTNAEGKITGALCFLHVASPELQHALEVQKMSEQAATNSFKELTYI 903
Query: 900 RQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
RQE++NPLNG++F + LL+ S ++E+QRQ + ++ C+ Q+ I+ DL IE+
Sbjct: 904 RQELRNPLNGMQFTYNLLKPSELTEDQRQLVSSNVLCQDQLKKILHDTDLESIEQ 958
>gi|183239022|gb|ACC60969.1| phytochrome A [Vitis riparia]
Length = 1124
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/940 (52%), Positives = 654/940 (69%), Gaps = 26/940 (2%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVP--EEQITAYLSKIQRGGLIQP 95
II DA L A+FE+S +S + R + + P ++ TAYL IQ+G LIQP
Sbjct: 22 IIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHIQKGKLIQP 81
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASL 151
FG +LA+++ TF++I YSEN EML + S + + + G IG D RT+F+ PS ++L
Sbjct: 82 FGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLG-IGTDVRTIFSGPSASAL 140
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KA E+SLLNPILVH + KPFYAI+HR+ ++ID EP K + ++ AGA+Q
Sbjct: 141 HKALGFGEVSLLNPILVHCKTSG--KPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQ 198
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEVVSEI +
Sbjct: 199 SYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKP 258
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A + V+Q ++L L L STLR+
Sbjct: 259 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRA 318
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIP 378
PH CH+QYM NM SIASLVMAV++N D +LWGLVVCHHT+PR++P
Sbjct: 319 PHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVP 378
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+RDAP IV+QSP++M
Sbjct: 379 FPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVM 438
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAAL Y + W +G+TP++ QL DI WL H D TGLSTDSL +AGYPGA
Sbjct: 439 DLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALA 498
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG AVCGMA +ITSKD LFWFRSHTA EV+WGGAKH P KD+G KMHPRSSFKAFLEV
Sbjct: 499 LGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEV 558
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK RS PW+ E++AIHSLQ+++R++F++ E + + +T+ N K++G+ EL +V
Sbjct: 559 VKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAVTS 618
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETA+ PI VD G +NGWN K++ELT LP +A+G L+ +V + S V+
Sbjct: 619 EMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLL-TLVEDSSADTVKK 677
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
++ AL G+E++NV+ +++ ++ + ++VNAC SRD NV GVCFV QDIT +K
Sbjct: 678 MLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLDENVVGVCFVAQDITSQK 737
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
+MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN AM K++GW R EV+ KML
Sbjct: 738 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLL 797
Query: 799 REIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRT 855
E+FG CR+K ++ I+L +TG+ +E FGFF++ G++VE L+ S++
Sbjct: 798 GEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLSVSKKL 857
Query: 856 DAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHK 915
D EG V G FCF+Q+ +LQ AL Q L + ++K LAYI++++KNPL+GI F K
Sbjct: 858 DREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGIIFSRK 917
Query: 916 LLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
++E + + E Q+Q L TS C+RQ+ I+D DL I EG
Sbjct: 918 MMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEG 957
>gi|83699543|gb|ABC40685.1| phytochrome B1 [Zea mays]
Length = 783
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/732 (66%), Positives = 584/732 (79%), Gaps = 24/732 (3%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+YS+S+ +PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 54 VAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 113
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL------IGIDARTLFTPPSGASL 151
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P S L
Sbjct: 114 TLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPHVSLGADARLLFSPSSAVLL 173
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
+A A+REISLLNPI +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQ
Sbjct: 174 ERAFAAREISLLNPIWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 231
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 232 SQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRD 291
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
+LEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR+
Sbjct: 292 NLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGLSQPLCLVGSTLRA 351
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPF 379
PHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR IPF
Sbjct: 352 PHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRCIPF 411
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 412 PLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMD 471
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYY G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GAA L
Sbjct: 472 LVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHGDSTGLSTDSLADAGYLGAAAL 531
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G+AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 532 GEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 591
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELSSV 616
K+RS PWE +E++AIHSLQ+++RDSF++ E N+SK V G Q +++G++ELSSV
Sbjct: 592 KSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAIVNGQVQLRELELRGINELSSV 651
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
A EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES+ V
Sbjct: 652 AREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEATV 711
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ RAL GEEDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+T
Sbjct: 712 EKLLSRALRGEEDKNVEIKLKTFGSEQSKGPIFVVVNACSSRDYTQNIVGVCFVGQDVTG 771
Query: 737 EKVLMDKFIRLQ 748
+KV+MDKF+ +Q
Sbjct: 772 QKVVMDKFVNIQ 783
>gi|464380|sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1
gi|297478|emb|CAA47284.1| type-A phytochrome [Nicotiana tabacum]
Length = 1124
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/943 (52%), Positives = 652/943 (69%), Gaps = 31/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQ--ITAYLSKIQRGG 91
II DA L A+FE+S G SF+YS SV ++ E P+ TAYL++IQ+G
Sbjct: 22 IIAQTTIDAKLHADFEES---GDSFDYSSSVRVTSVAGDERKPKSDRVTTAYLNQIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDF--ELNGL-IGIDARTLFTPPSG 148
IQPFGC+LA++E TF++I +SEN EML + S + EL L IG D RT+FT PS
Sbjct: 79 FIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALGIGTDIRTIFTGPSA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
A+L KA E+SLLNP+LVH + KP+YAI+HR+ ++ID EP K + ++ AG
Sbjct: 139 AALQKALGFGEVSLLNPVLVHCKTSG--KPYYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AI+RLQALP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEVV+EI
Sbjct: 197 ALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVVAEI 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ L+PYLG+H+PA DIPQAARFLF +N+VRMICDC A V V+Q ++L L L ST
Sbjct: 257 TKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPR 375
LR+PH CHLQYM NM SIASLVMAV++N D +LWGLVVCH+T+PR
Sbjct: 317 LRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRLWGLVVCHNTTPR 376
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+R AP IV+QSP
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRVAPLGIVSQSP 436
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVKCDGAAL Y + +G+TP++ QL DI WL H D TGLSTDSL +AG+PG
Sbjct: 437 NIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDSTGLSTDSLYDAGFPG 496
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RI+ K +LFW+RSHTA EV+WGGAKH P KD+G KMHPRSSFKAF
Sbjct: 497 ALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 556
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++ ++ + + + +T+ N K+ G+ EL +
Sbjct: 557 LEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTKLNDLKIDGLQELEA 616
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETA+ PIF VD G +NGWN K+AELTGLP EA+G L+ +V + S
Sbjct: 617 VTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHLL-TLVEDSSVDT 675
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V ++ AL G+E++NVE +++ S + ++VNAC SRD ++V GVCF+ QDIT
Sbjct: 676 VSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGDSVVGVCFIAQDIT 735
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K +MDKF R++GDY AIIQ+ +PLIPPIF +D+ CSEWN+AM K+TGW R +VI K
Sbjct: 736 GQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVIDK 795
Query: 796 MLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG CR+K Q+ F ++L +TGQ FGFF R G++VE L S
Sbjct: 796 MLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFARNGKYVECLLCVS 855
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+R D EG V G FCF+Q+ +LQ AL Q L + ++K LAYIR++++NPL+GI F
Sbjct: 856 KRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYIRRQIRNPLSGIIF 915
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
K+LE +++ E Q+ L TS C+RQ+ I+D DL I +G
Sbjct: 916 SRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDG 958
>gi|401782502|dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]
Length = 1124
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/931 (52%), Positives = 652/931 (70%), Gaps = 37/931 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
+I DA L A FE+S G SF+YS SV E ++Q TAYL IQ+G
Sbjct: 22 VIAQTTVDAKLHANFEES---GSSFDYSNSVRVSSEVTGDQQPRSDKVTTAYLHHIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA+++ TFR+I YSEN EML + S + D + G IG D RT+FT PS
Sbjct: 79 LIQPFGCLLALDDKTFRVIAYSENAPEMLTMVSHAVPSVGDHPVLG-IGTDVRTIFTGPS 137
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
++L KA E+SLLNPILVH S KPFYAI+HR+ +VID EP K + ++ A
Sbjct: 138 ASALHKALGFGEVSLLNPILVHCKSSG--KPFYAIVHRVTGSLVIDFEPVKPYEVPMTAA 195
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEVV+E
Sbjct: 196 GALQSYKLAAKAIARLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVAE 255
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
+ ++ LEPYLG+H+P+ DIPQA+RFLF +N+VRMI DC A V V+Q ++L L L S
Sbjct: 256 LTKTGLEPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKNVKVLQDEKLPLDLTLCGS 315
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------------SMKLWGLVVCHHTSP 374
TLR+PH CHLQYM NM SIASLVMAV+IN D +LWGLVVCH+T+P
Sbjct: 316 TLRAPHSCHLQYMENMNSIASLVMAVVINEGDYEVAGPDSAQTQKRKRLWGLVVCHNTTP 375
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDMLLRDAP IV+Q+
Sbjct: 376 RFVPFPLRYACEFLAQVFAIHVNKELELEDQMIEKNILRTQTLLCDMLLRDAPLGIVSQT 435
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDLVKCDGAAL Y + W +G+TP++ Q++DI+ WL H D TGLSTDSL +AG+P
Sbjct: 436 PNIMDLVKCDGAALLYKNKIWRLGLTPSDFQIQDISLWLSECHMDSTGLSTDSLYDAGFP 495
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GA LG CGMA +ITSKD +FWFRSHTA E++WGGAKH P+ KDNG KMHPRSSFKA
Sbjct: 496 GALALGDVACGMAAVKITSKDIIFWFRSHTAAEIRWGGAKHDPDEKDNGWKMHPRSSFKA 555
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEE--NDSKVQGNTQQNGSKMQGVDE 612
FLEV K RS PW+ E++AIHSLQ+++R++F+++ + N++ +Q Q + K+ GV E
Sbjct: 556 FLEVAKTRSLPWKDYEMDAIHSLQLILRNAFKDVGDMAVNNNGIQ--MQLSDLKIDGVQE 613
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
L +V EMVRLIETA+ PI VD G++NGWN K++ELTGLP +A+GK+L+ +V E S
Sbjct: 614 LEAVTGEMVRLIETASVPILAVDIEGSVNGWNTKISELTGLPVDKAIGKNLL-TLVEESS 672
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQ 732
V ++ AL G+E++N++ +++ + + ++VNAC SRD NV GVCFV Q
Sbjct: 673 TSMVGRMLELALQGKEEQNIQFEIKTHGARADFGPISLVVNACASRDIHENVVGVCFVAQ 732
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
DIT +K++MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN AM K+TGW R EV
Sbjct: 733 DITGQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMTKLTGWKREEV 792
Query: 793 IGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVAL 849
+ KML E+FG C +K Q+ +++ + +TG+ +E PFGF+NR G++ E L
Sbjct: 793 MDKMLLGEVFGIHMACCPLKNQEAFVNLGVVINRAMTGEVSEKVPFGFWNRGGKYTECLL 852
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
S++ D+EG V G FCF+Q+ P+LQ AL Q L + + K LAYI+++++NPL+G
Sbjct: 853 CVSKKLDSEGAVTGVFCFLQLASPELQQALHVQRLSEQTAVKRFKALAYIKRQIRNPLSG 912
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQI 940
I F K++E + + Q+Q + TS C++Q+
Sbjct: 913 ILFSRKMIEGTELGAEQKQLIHTSAQCQQQL 943
>gi|357441993|ref|XP_003591274.1| Phytochrome A [Medicago truncatula]
gi|355480322|gb|AES61525.1| Phytochrome A [Medicago truncatula]
Length = 1171
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/946 (51%), Positives = 655/946 (69%), Gaps = 28/946 (2%)
Query: 18 NTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP-EGVP 76
T P +SS+ + N + II DA L A FE+S +S + R S E P
Sbjct: 50 TTRPSQSSNNSGRSRNSAR-IIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGEHQP 108
Query: 77 EEQ--ITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
TAYL+ IQRG IQPFGC+LA++E T ++I YSEN EML + S + D
Sbjct: 109 RSNKVTTAYLNTIQRGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHP 168
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
G IG D RT+FT PS ++L KA E+SLLNPILVH + KPFYAI+HR+ +
Sbjct: 169 ALG-IGTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSG--KPFYAIIHRVTGSL 225
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
+ID EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 226 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 285
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEV++E+ ++ LEPYLG+H+PA DIPQAARFLF +N+VRMI DCHA V
Sbjct: 286 VMAYKFHEDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHV 345
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------- 359
V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N D
Sbjct: 346 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLP 405
Query: 360 --SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVL 417
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ L
Sbjct: 406 QKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEFQILEKNILRTQTL 465
Query: 418 LCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNH 477
LCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W++G TP+E Q+++IA W+ H
Sbjct: 466 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGATPSEPQIREIALWMSEYH 525
Query: 478 GDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP 537
D TGLSTDSL++AG+PGA L VCGMA RITSKD +FWFRSHTA E++WGGAKH P
Sbjct: 526 TDSTGLSTDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEP 585
Query: 538 EHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQ 597
+D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++ ++ + + +
Sbjct: 586 GEQDDGRKMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKA 645
Query: 598 GNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASE 657
NT+ N K++G+ EL +V EMVRLIETAT PI VD G +NGWN K++ELTGLP E
Sbjct: 646 INTRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGE 705
Query: 658 AMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTS 717
A+GK L+ +V + S V+ ++ AL G+E+KNV+ +++ + + ++VNAC S
Sbjct: 706 AIGKHLL-TLVEDSSTDIVKKMLNLALQGQEEKNVQFEIKTHGSKTDCGPISLIVNACAS 764
Query: 718 RDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
RD NV GVCFV QDIT +K +MDKF R++GDY+AI+Q+ N LIPPIF +DE C EW
Sbjct: 765 RDLHENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEW 824
Query: 778 NAAMEKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFP 834
NAAM K+TGW R EV+ KML E+FG CR+K Q+ F I+L + +TG TE P
Sbjct: 825 NAAMIKITGWKREEVMDKMLLGEVFGTHMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVP 884
Query: 835 FGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIK 894
FGF +R+G++VE L+ S++ DAEG V G FCF+Q+ P+LQ AL Q L + ++K
Sbjct: 885 FGFLSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLK 944
Query: 895 ELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQI 940
L Y+R++++NPL+GI F K+LE++ + Q++ + TS C+RQ+
Sbjct: 945 VLTYMRRQIRNPLSGIVFSSKMLENTELGTEQKRIVNTSSQCQRQL 990
>gi|406685623|gb|AFS51252.1| phytochrome P, partial [Sundacarpus amarus]
Length = 670
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/673 (71%), Positives = 553/673 (82%), Gaps = 22/673 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGCML VEE F+II YSEN LEMLDL +S + +L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLTVEEAGFKIIAYSENALEMLDLMPQSVPNMDLGDPAGGGAV 60
Query: 134 -LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVI 192
IG D RTLFTP S +L KAA +REISL+NPI VHS KPFYAI+HRIDVGIV+
Sbjct: 61 LAIGTDVRTLFTPASARALEKAAVAREISLMNPIWVHSQYTG--KPFYAIVHRIDVGIVV 118
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
DLEP + GD A+S AGAVQSQKLAV AISRLQ+LP GD+GLLCDTVVEDV++LTGYDRVM
Sbjct: 119 DLEPLRMGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDVGLLCDTVVEDVRELTGYDRVM 178
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FH+D+HGEVV+EIRRSDLEPYLG H+PA DIPQA+RFLF QNRVRMICDC A PV V
Sbjct: 179 AYKFHEDEHGEVVAEIRRSDLEPYLGSHYPATDIPQASRFLFMQNRVRMICDCSATPVRV 238
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMK 362
IQS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D SMK
Sbjct: 239 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGGGTSGRTSMK 298
Query: 363 LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDML 422
LWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A Q+ EK+ILRTQ LLCDML
Sbjct: 299 LWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDML 358
Query: 423 LRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTG 482
LRDAP IV+QSPSIM+LVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TG
Sbjct: 359 LRDAPIGIVSQSPSIMNLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTG 418
Query: 483 LSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDN 542
LSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+
Sbjct: 419 LSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDD 478
Query: 543 GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQ 602
G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N +K + +
Sbjct: 479 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN-TKTMVHARL 537
Query: 603 NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKS 662
N K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKS
Sbjct: 538 NDMKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKS 597
Query: 663 LIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKN 722
L+ ++V EES +VE ++ RAL GEE+KNVE+KLR F L+KQ +Y++VNAC+S DY +
Sbjct: 598 LVHDLVFEESAESVEKMLYRALRGEEEKNVEVKLRTFGLEKQKEAIYLVVNACSSMDYTD 657
Query: 723 NVKGVCFVGQDIT 735
N+ GVCFVGQD+T
Sbjct: 658 NIVGVCFVGQDVT 670
>gi|258677125|gb|ACV87353.1| phytochrome A [Aquilegia formosa]
Length = 1130
Score = 996 bits (2575), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/943 (51%), Positives = 655/943 (69%), Gaps = 32/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVI----SPPEGVPEEQITAYLSKIQRGGLI 93
+I DA L AEFE++ G SF+YSRSV S + ++ TAYL +IQ+G I
Sbjct: 22 VIAQTTVDAKLHAEFEET---GSSFDYSRSVSVTNSSNQQTRSDKVTTAYLHQIQKGKQI 78
Query: 94 QPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGA 149
QPFGC+LA++E T ++I YSEN EML + S + + + G IG D +T+ T PS +
Sbjct: 79 QPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLG-IGTDLKTILTSPSAS 137
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA A +++LLNPILVH S KPFYAI+HR+ ++ID EP K + ++ AGA
Sbjct: 138 ALQKALAFSDVTLLNPILVHCKSSG--KPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 195
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
+QS KLA AI+RLQ+LP G I LCDTVVE+V +LTGYDRVM+Y FHDDDHGEVVSE
Sbjct: 196 LQSYKLAAKAIARLQSLPSGSIDRLCDTVVEEVFQLTGYDRVMVYKFHDDDHGEVVSETT 255
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+ L PYLG+H+PA DIPQAARFLF +N++RMICDC A V V+Q ++L L L STL
Sbjct: 256 KEGLPPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLPFELTLCGSTL 315
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDS--------------MKLWGLVVCHHTSPR 375
R+PH CHLQYM NM SIASLVMAV+IN D +LWGLVVCH+T+PR
Sbjct: 316 RAPHSCHLQYMENMDSIASLVMAVVINDGDEEEGTVEGASQSQKRKRLWGLVVCHNTTPR 375
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL+Q F++ + E ++ Q+ EKNILRTQ LLCDML+R+AP IV+QSP
Sbjct: 376 FVPFPLRYACEFLIQVFAIHVNKEFELENQILEKNILRTQTLLCDMLMRNAPIGIVSQSP 435
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVKCDGAAL Y + W +G++P+ES ++DIA WL H D TGLSTDSL +AG+PG
Sbjct: 436 NIMDLVKCDGAALLYQNKIWRLGLSPSESHIRDIASWLSEYHMDSTGLSTDSLYDAGFPG 495
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A +G VCGMA RI SKD LFWFRSHTA E++WGGAKH P KD+G KMHPRSSFKAF
Sbjct: 496 ALSIGDTVCGMAAVRINSKDMLFWFRSHTAGEIRWGGAKHEPGEKDDGRKMHPRSSFKAF 555
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RSFPW+ E++AIHSLQ+++R++F+++E + + ++Q + K+ G++EL +
Sbjct: 556 LEVVKTRSFPWKDFEMDAIHSLQLILRNTFKDIETADGNTNVIHSQLDKLKIDGMEELEA 615
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PI VD +G INGWN K+AELTGLP + +GK + ++V E S
Sbjct: 616 VTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDQVIGKHFL-KLVEESSAET 674
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ ALLG+E++NV +++ +K V ++VNAC SRD + NV GVCFV D+T
Sbjct: 675 VKRMLHLALLGKEEQNVHFEMKTHGSKKDSGPVSLVVNACASRDLQENVVGVCFVAHDLT 734
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
++K++MDKF R++GDY+AI+Q+ +PL PPIF +DE C EWN AM K++GW R EV+ K
Sbjct: 735 NQKMVMDKFTRIEGDYKAILQNPSPLYPPIFGTDEFGWCCEWNPAMTKLSGWDRAEVMDK 794
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML EIFG + CR+K Q+ I+L + G+ T+ FGFF R G +V+ L+ +
Sbjct: 795 MLLGEIFGTNMSCCRLKNQETFVNLGIVLNGAMMGEETDKVSFGFFGRNGNYVDCLLSVT 854
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
++ D EG V G FCF+ + +LQ AL Q L + K K L Y++++++NPL+GI F
Sbjct: 855 KKVDGEGVVTGVFCFLHTVSQELQQALHVQRLSEQSALQKSKGLTYMKRQIRNPLSGIIF 914
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
K++ + + E Q+Q L TS C+RQ+ +++ DL I +G
Sbjct: 915 SGKMMGGTDLDEEQKQLLHTSMHCQRQLHKVLEDTDLERIMDG 957
>gi|39980618|gb|AAR33029.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/943 (54%), Positives = 656/943 (69%), Gaps = 35/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
++ DA L AEFE +S ++F+YS SV I P V ++ Y +QRG IQ
Sbjct: 25 VVAQTPVDAQLHAEFE---SSQRNFDYSSSVSAAIRP--SVSTSTVSTYHQTMQRGLYIQ 79
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASL 151
PFGC+LAV TF ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++
Sbjct: 140 HKAATFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALK 197
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV+SE RRS
Sbjct: 198 SYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRS 257
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A V +IQ L QPL L STLR+
Sbjct: 258 DLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRA 317
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIP 378
HGCH QYM NMGS+ASLVM+V I++ + KLWGLVVCHHTSPR++P
Sbjct: 318 SHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVP 377
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++M
Sbjct: 378 FPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVM 437
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY + L+G TP+ES++K IA WL NH TGLSTDSL EAGYPGAA
Sbjct: 438 DLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAA 497
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLE 557
L + VCGMA +I+SKDF+FWFRSHT KE+KWGGAKH P + DNG KMHPRSSFKAFLE
Sbjct: 498 LREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLE 557
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELS 614
VVK RS PWE EI+AIHSLQ+++R S Q+ E+ N + V+ + + K+QG+ EL
Sbjct: 558 VVKWRSVPWEDVEIDAIHSLQLILRGSLQD-EDANRNNVRSIVKAPPDDTKKIQGLLELR 616
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETATAP+ VD +G INGWN K AELTGLP EA+G+ LID VV +S
Sbjct: 617 TVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVV-VDSIE 675
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ ++ AL G E++N+E+KL+ F Q+ + + ++VN+C SRD V GVCFVGQD+
Sbjct: 676 VVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDL 735
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM+K+TG R +VI
Sbjct: 736 TTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVID 795
Query: 795 KMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L E+F CR+K LTK IL+ I+GQ E FGFF+ G+++E LT
Sbjct: 796 KLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTV 855
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R +AEGK+ G CF+ + P+LQ AL+ Q + + KEL YI QE++NPLNG++
Sbjct: 856 NKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQ 915
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 916 FTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQ 958
>gi|9049368|dbj|BAA99410.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/962 (50%), Positives = 661/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PSQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH + + KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSA--KPFYAIVHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
++D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSELHLQEIASWLYEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG AVCGMA RI+ KD +FWFRSHTA EV+WGGAKH+
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALSLGDAVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHN 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTN 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK L+ +V + S V+ ++ AL G E++NV+ +++ + + + + VNAC
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHQSRADAGTISLAVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q +E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNGAVTSQESEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G+++E L S++ D EG V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K +AYI+++++NPL+G+ F +++E + + QRQ L TS C+ Q+ ++D DL I
Sbjct: 898 KAIAYIKRQIRNPLSGVMFTREMIEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|39980602|gb|AAR33021.1| phytochrome C [Sorghum bicolor]
gi|39980604|gb|AAR33022.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/943 (53%), Positives = 655/943 (69%), Gaps = 35/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
++ DA L AEFE +S ++F+YS SV I P V ++ Y +QRG IQ
Sbjct: 25 VVAQTPVDAQLHAEFE---SSQRNFDYSSSVSAAIRP--SVSTSTVSTYHQTMQRGLYIQ 79
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASL 151
PFGC+LAV TF ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D + AGA++
Sbjct: 140 HKAATFGEVNLLNPILVHA--RTSRKPFYAILHRIDVGLVIDLEPVNPVDVPATAAGALK 197
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV+SE RRS
Sbjct: 198 SYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRS 257
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A V +IQ L QPL L STLR+
Sbjct: 258 DLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRA 317
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIP 378
HGCH QYM NMGS+ASLVM+V I++ + KLWGLVVCHHTSPR++P
Sbjct: 318 SHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVP 377
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++M
Sbjct: 378 FPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVM 437
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY + L+G TP+ES++K IA WL NH TGLSTDSL EAGYPGAA
Sbjct: 438 DLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAA 497
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLE 557
L + VCGMA +I+SKDF+FWFRSHT KE+KWGGAKH P + DNG KMHPRSSFKAFLE
Sbjct: 498 LREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLE 557
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELS 614
VVK RS PWE E++AIHSLQ+++R S Q+ E+ N + V+ + + K+QG+ EL
Sbjct: 558 VVKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANRNNVRSIVKAPPDDTKKIQGLLELR 616
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETATAP+ VD +G INGWN K AELTGLP EA+G+ LID VV +S
Sbjct: 617 TVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVV-VDSIE 675
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ ++ AL G E++N+E+KL+ F Q+ + + ++VN+C SRD V GVCFVGQD+
Sbjct: 676 VVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDL 735
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM+K+TG R +VI
Sbjct: 736 TTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVID 795
Query: 795 KMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L E+F CR+K LTK IL+ I+GQ E FGFF+ G+++E LT
Sbjct: 796 KLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTV 855
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R +AEGK+ G CF+ + P+LQ AL+ Q + + KEL YI QE++NPLNG++
Sbjct: 856 NKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQ 915
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 916 FTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQ 958
>gi|37779204|gb|AAO86644.1| PHYA3 photoreceptor [Stellaria longipes]
Length = 1123
Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/928 (52%), Positives = 644/928 (69%), Gaps = 32/928 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGV-----PEEQITAYLSKIQRGGL 92
II DA L AEFE+S F+YS SV GV ++ ++YL +IQ+G
Sbjct: 22 IIAQTIQDAKLHAEFEES---SNEFDYSSSVRGSTSGVNQLPQSDKVTSSYLLQIQKGKF 78
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGC+LA+++ TFR+I +SEN EML + S + D + G IG D RT+FT PS
Sbjct: 79 IQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDLPVIG-IGTDIRTIFTDPSA 137
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
++L KA ++SLLNPILVH + KPFYAI+HR+ +VID EP K + ++ AG
Sbjct: 138 SALQKALGFTDVSLLNPILVHCKNSG--KPFYAIVHRVTRSLVIDFEPVKPYEVPMTAAG 195
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AI+RLQ+LP G++ L DT+V++V +LTGYDRVM Y FHDDDHGEVVSE+
Sbjct: 196 ALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEV 255
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ +L+ YLG+H+PA DIPQAARFLF +N+VR+ICDC A V V+Q ++L L L ST
Sbjct: 256 TKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRVVQDEKLSVDLTLCGST 315
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPR 375
LR+PHGCH QYM NM SI SLVMAV++N +D +LWGLVVCHHTSPR
Sbjct: 316 LRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHKRKRLWGLVVCHHTSPR 375
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q EK ILRTQ LLCDML+RDAP IVTQ+P
Sbjct: 376 FVPFPLRYACEFLAQVFAIHVNKELELESQFLEKKILRTQTLLCDMLMRDAPLGIVTQNP 435
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
++MDLVKCDGAAL Y + W +G++PT+ QL+DIA WL +H D TGLSTDSL +AGYPG
Sbjct: 436 NVMDLVKCDGAALLYNNKIWKLGISPTDYQLRDIAGWLSRDHTDSTGLSTDSLHDAGYPG 495
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RIT + LFWFRSHTA EVKWGGAKH KD+G KMHPR+SFKAF
Sbjct: 496 ARSLGDTVCGMAAVRITLNNMLFWFRSHTAAEVKWGGAKHETGEKDDGSKMHPRTSFKAF 555
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F+++E + + +++ + ++ G+ EL +
Sbjct: 556 LEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDVEASDLNTSVIHSKISDLQINGLRELEA 615
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PI VD+ G +NGWN K+ ELTG+P +EA+GK I + E S
Sbjct: 616 VTSEMVRLIETATVPILAVDADGLVNGWNTKIFELTGVPVAEAVGKH-IASLAEESSIDN 674
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL GEE KNV+ ++++ + S + ++VNAC S+D NV GVC + QDIT
Sbjct: 675 VKRMLQLALQGEEKKNVQFEIKRHQSNPDSSPISLVVNACASKDVNGNVVGVCLITQDIT 734
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K +MDKF R++GDY+AIIQS NPLIPPIF +DE CSEWN AM K+TGW R EVI K
Sbjct: 735 GQKTVMDKFTRIEGDYKAIIQSPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWSREEVIDK 794
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG + CR+K Q+ F I+L ++GQ T+ P FF R G+++E L +
Sbjct: 795 MLLGEVFGTQKSCCRLKNQEAFVNFGIILNGAMSGQNTDKLPIEFFTRFGKYIECLLCVN 854
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
++ D +G V G FCF+Q+ DLQ AL Q L + + K LAY+++++KNPL+GI F
Sbjct: 855 KKLDGDGAVTGVFCFLQLASHDLQHALHIQRLAEQAATKRAKALAYMKRQIKNPLSGIMF 914
Query: 913 VHKLLESSSISENQRQYLETSDACERQI 940
K+L+ + + E+QRQ L+TS C+ Q+
Sbjct: 915 SGKILDGTEMGEDQRQVLQTSIRCQGQL 942
>gi|255543066|ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
gi|223548557|gb|EEF50048.1| phytochrome A, putative [Ricinus communis]
Length = 1124
Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/944 (52%), Positives = 648/944 (68%), Gaps = 33/944 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEGV-----PEEQITAYLSKIQRGG 91
II DA L A+FE+S G SF+YS SV ++ G+ ++ TAYL IQ+G
Sbjct: 22 IISQTAVDAKLHADFEES---GSSFDYSNSVHVTSSTGLDHAPRSDKVTTAYLHHIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E T+++I YSEN EML + S + D + G IG D RT+FT PS
Sbjct: 79 LIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLG-IGTDIRTIFTAPS 137
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
++L KA ++SLLNPILVH + KPFYAI+HR+ +ID EP K + ++ A
Sbjct: 138 ASALQKALGFGDVSLLNPILVHCKTSG--KPFYAIVHRVTGSFIIDFEPVKPYEVPMTAA 195
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AISRLQ+LP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEV+SE
Sbjct: 196 GALQSYKLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISE 255
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC A V V+Q ++L L L S
Sbjct: 256 VTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPLELTLCGS 315
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSP 374
TLR+PH CHLQYM NM S+ASLVMAV++N D +LWGLVVCH+T+P
Sbjct: 316 TLRAPHSCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRKRLWGLVVCHNTTP 375
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDMLLRDAP I+TQS
Sbjct: 376 RFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLLRDAPLGILTQS 435
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+I DLVKCDGAAL Y + W +GVTP++ Q++DIA WL H D TGLSTDSL +AGY
Sbjct: 436 PNITDLVKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMDSTGLSTDSLYDAGYS 495
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
A L VCGMA RITSKD LFWFR+ TA E++WGGAKH P KD+G KMHPRSSFKA
Sbjct: 496 AALSLEDVVCGMAAVRITSKDMLFWFRAPTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKA 555
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +++ + K++G+ EL
Sbjct: 556 FLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDAETMDADAKAIHSRLSDLKIEGMQELE 615
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETAT PI VD G +NGWN K+AELTGLP +A+GK L+ +V + S
Sbjct: 616 AVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGKHLL-TLVEDGSID 674
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+N++ AL G+E++N++ +++ + + + ++VNAC SRD NV GVCFV QDI
Sbjct: 675 LVKNMLFSALQGKEEQNIQFEIKTHGSKVESGPISLVVNACASRDISENVVGVCFVAQDI 734
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN AM K+TGW R EV+
Sbjct: 735 TGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWKREEVMD 794
Query: 795 KMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
KML E+FG C +K Q+ +L+ +T Q E F FF R ++VE L
Sbjct: 795 KMLLGEVFGINRACCCLKNQEAFVNLGVLINNAMTSQVPEKVSFSFFARNKKYVECLLCV 854
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
S++ D EG V G FCF+Q+ +LQ AL Q L + ++K LAYI+++++NPL+GI
Sbjct: 855 SKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKTLAYIKRQIQNPLSGIM 914
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F KL+E + + Q+Q L TS C+RQ+ I+D D+ I EG
Sbjct: 915 FSRKLMEITELDAEQKQLLHTSAQCQRQLSKILDDSDIDSIVEG 958
>gi|242038093|ref|XP_002466441.1| hypothetical protein SORBIDRAFT_01g007850 [Sorghum bicolor]
gi|39980596|gb|AAR33018.1| phytochrome C [Sorghum bicolor]
gi|39980598|gb|AAR33019.1| phytochrome C [Sorghum bicolor]
gi|39980600|gb|AAR33020.1| phytochrome C [Sorghum bicolor]
gi|39980622|gb|AAR33031.1| phytochrome C [Sorghum bicolor subsp. x drummondii]
gi|241920295|gb|EER93439.1| hypothetical protein SORBIDRAFT_01g007850 [Sorghum bicolor]
Length = 1135
Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/943 (53%), Positives = 656/943 (69%), Gaps = 35/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
++ DA L AEFE +S ++F+YS SV I P V ++ Y +QRG IQ
Sbjct: 25 VVAQTPVDAQLHAEFE---SSQRNFDYSSSVSAAIRP--SVSTSTVSTYHQTMQRGLYIQ 79
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASL 151
PFGC+LAV TF ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++
Sbjct: 140 HKAATFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALK 197
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV+SE RRS
Sbjct: 198 SYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRS 257
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A V +IQ L QPL L STLR+
Sbjct: 258 DLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRA 317
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIP 378
HGCH QYM NMGS+ASLVM+V I++ + KLWGLVVCHHTSPR++P
Sbjct: 318 SHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVP 377
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++M
Sbjct: 378 FPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVM 437
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY + L+G TP+ES++K IA WL NH TGLSTDSL EAGYPGAA
Sbjct: 438 DLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAA 497
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLE 557
L + VCGMA +I+SKDF+FWFRSHT KE+KWGGAKH P + DNG KMHPRSSFKAFLE
Sbjct: 498 LREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLE 557
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELS 614
VVK RS PWE E++AIHSLQ+++R S Q+ E+ N + V+ + + K+QG+ EL
Sbjct: 558 VVKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANRNNVRSIVKAPPDDTKKIQGLLELR 616
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETATAP+ VD +G INGWN K AELTGLP EA+G+ LID VV +S
Sbjct: 617 TVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVV-VDSIE 675
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ ++ AL G E++N+E+KL+ F Q+ + + ++VN+C SRD V GVCFVGQD+
Sbjct: 676 VVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDL 735
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM+K+TG R +VI
Sbjct: 736 TTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVID 795
Query: 795 KMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L E+F CR+K LTK IL+ I+GQ E FGFF+ G+++E LT
Sbjct: 796 KLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTV 855
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R +AEGK+ G CF+ + P+LQ AL+ Q + + KEL YI QE++NPLNG++
Sbjct: 856 NKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQ 915
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 916 FTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQ 958
>gi|9049366|dbj|BAA99409.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/962 (50%), Positives = 660/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PSQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENSPELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH + + KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSA--KPFYAIVHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
++D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q ++L L L STLR+PH CHLQYM NM SIAS VMAV++N +D
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASHVMAVVVNEEDGEGDATDSTTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSELHLQEIASWLYEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG AVCGMA RI+ KD +FWFRSHTA EV+WGGAKH+
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALSLGDAVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHN 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTN 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK L+ +V + S V+ ++ AL G E++NV+ +++ + + + + VNAC
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHQSRADAGTISLAVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q +E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNGAVTSQESEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G+++E L S++ D EG V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K +AYI+++++NPL+G+ F K++E + + QRQ L TS C+ Q+ ++D DL I
Sbjct: 898 KAIAYIKRQIRNPLSGVMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|39980612|gb|AAR33026.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980614|gb|AAR33027.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980616|gb|AAR33028.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 993 bits (2567), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/943 (53%), Positives = 656/943 (69%), Gaps = 35/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
++ DA L AEFE +S ++F+YS SV I P V ++ Y +QRG IQ
Sbjct: 25 VVAQTPVDAQLHAEFE---SSQRNFDYSSSVSAAIRP--SVSTSTVSTYHQTMQRGLYIQ 79
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASL 151
PFGC+LAV TF ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++
Sbjct: 140 HKAATFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALK 197
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV+SE RRS
Sbjct: 198 SYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRS 257
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A V +IQ L QPL L STLR+
Sbjct: 258 DLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRA 317
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIP 378
HGCH QYM NMGS+ASLVM+V I++ + KLWGLVVCHHTSPR++P
Sbjct: 318 SHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVP 377
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++M
Sbjct: 378 FPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVM 437
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY + L+G TP+ES++K IA WL NH TGLSTDSL EAGYPGAA
Sbjct: 438 DLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAA 497
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLE 557
L + VCGMA +I+SKDF+FWFRSHT KE+KWGGAKH P + DNG KMHPRSSFKAFLE
Sbjct: 498 LREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLE 557
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELS 614
VVK RS PWE E++AIHSLQ+++R S Q+ E+ N + V+ + + K+QG+ EL
Sbjct: 558 VVKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANRNNVRSIVKAPPDDTKKIQGLLELR 616
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETATAP+ VD +G INGWN K AELTGLP EA+G+ LID VV +S
Sbjct: 617 TVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVV-VDSIE 675
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ ++ AL G E++N+E+KL+ F Q+ + + ++VN+C SRD V GVCFVGQD+
Sbjct: 676 VVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDL 735
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM+K+TG R +VI
Sbjct: 736 TTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVID 795
Query: 795 KMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L E+F CR+K LTK IL+ I+GQ E FGFF+ G+++E LT
Sbjct: 796 KLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTV 855
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R +AEGK+ G CF+ + P+LQ AL+ Q + + KEL YI QE++NPLNG++
Sbjct: 856 NKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQ 915
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 916 FTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQ 958
>gi|340007753|gb|AEK26583.1| phytochrome A [Populus tremula]
Length = 1109
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/943 (51%), Positives = 651/943 (69%), Gaps = 31/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVIS-----PPEGVPEEQITAYLSKIQRGGL 92
II DA L A+FE+S +S + R S PP ++ TAYL IQ+G L
Sbjct: 22 IIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRS--DKVTTAYLHHIQKGKL 79
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGC+LA++E TFR++ YSEN E+L + S + + + G IG D RT+FT PS
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLG-IGTDIRTIFTAPSA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
++L KA ++SLLNPILVH + KPFYAI+HR+ ++ID EP K + ++ AG
Sbjct: 139 SALQKAMGFGDVSLLNPILVHCKTSG--KPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR M Y FHDDDHGEVVSE+
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEV 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ +EPYLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L ST
Sbjct: 257 TKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGST 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPR 375
LR+PH CHLQYM NM SIASLVMAV++N D +LWGLVVCH+TSPR
Sbjct: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPR 376
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+RDAP IVTQSP
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSP 436
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVKCDGA L+Y + W +G+TP++ QL+DIA+WL H D TGLSTDSL +AGYPG
Sbjct: 437 NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RITSKD LFWFRS TA E++WGGAKH P KD+G +MHPRSSFKAF
Sbjct: 497 ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F+++E + + + + K++G+ EL +
Sbjct: 557 LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PI VD G +NGWN K++ELTGL +A+GK L+ +V + S
Sbjct: 617 VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLL-TLVEDSSVDI 675
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G+E++N++ +++ + + + ++VNAC SRD NV GVCFVGQDIT
Sbjct: 676 VKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDIT 735
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K++MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN AM +TGW R EV+ K
Sbjct: 736 GQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDK 795
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG CR+K Q+ ++L +TGQ +E FGFF R G++VE L S
Sbjct: 796 MLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVS 855
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
++ D EG V G FCF+Q+ +LQ AL Q L + ++K LAY+++++ NPL+GI F
Sbjct: 856 KKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIF 915
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
K++E + + Q++ L TS C+ Q+ I+D DL I EG
Sbjct: 916 SGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEG 958
>gi|39980620|gb|AAR33030.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/943 (53%), Positives = 655/943 (69%), Gaps = 35/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
++ DA L AEFE +S ++F+YS SV I P V ++ Y +QRG IQ
Sbjct: 25 VVAQTPVDAQLHAEFE---SSQRNFDYSSSVSAAIRP--SVSTSTVSTYHQTMQRGLYIQ 79
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASL 151
PFGC+LAV TF ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++
Sbjct: 140 HKAATFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALK 197
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV+SE RRS
Sbjct: 198 SYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRS 257
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A V +IQ L QPL L STLR+
Sbjct: 258 DLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRA 317
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIP 378
HGCH QYM NMGS+ASLVM+V I++ + KLWGLVVCHHTSPR++P
Sbjct: 318 SHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVP 377
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++
Sbjct: 378 FPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVT 437
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY + L+G TP+ES++K IA WL NH TGLSTDSL EAGYPGAA
Sbjct: 438 DLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAA 497
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLE 557
L + VCGMA +I+SKDF+FWFRSHT KE+KWGGAKH P + DNG KMHPRSSFKAFLE
Sbjct: 498 LREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLE 557
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELS 614
VVK RS PWE E++AIHSLQ+++R S Q+ E+ N + V+ + + K+QG+ EL
Sbjct: 558 VVKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANRNNVRSIVKAPPDDTKKIQGLLELR 616
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETATAP+ VD +G INGWN K AELTGLP EA+G+ LID VV +S
Sbjct: 617 TVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVV-VDSIE 675
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ ++ AL G E++N+E+KL+ F Q+ + + ++VN+C SRD V GVCFVGQD+
Sbjct: 676 VVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDL 735
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM+K+TG R +VI
Sbjct: 736 TTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVID 795
Query: 795 KMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L E+F CR+K LTK IL+ I+GQ E FGFF+ G+++E LT
Sbjct: 796 KLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTV 855
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R +AEGK+ G CF+ + P+LQ AL+ Q + + KEL YI QE++NPLNG++
Sbjct: 856 NKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQ 915
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 916 FTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQ 958
>gi|39980606|gb|AAR33023.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980608|gb|AAR33024.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980610|gb|AAR33025.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/943 (53%), Positives = 655/943 (69%), Gaps = 35/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
++ DA L AEFE +S ++F+YS SV I P V ++ Y +QRG IQ
Sbjct: 25 VVAQTPVDAQLHAEFE---SSQRNFDYSSSVSAAIRP--SVSTSTVSTYHQTMQRGLYIQ 79
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASL 151
PFGC+LAV TF ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++
Sbjct: 140 HKAATFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALK 197
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV+SE RRS
Sbjct: 198 SYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRS 257
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A V +IQ L QPL L STLR+
Sbjct: 258 DLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRA 317
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIP 378
HGCH QYM NMGS+ASLVM+V I++ + KLWGLV+CHHTSPR++P
Sbjct: 318 SHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVICHHTSPRFVP 377
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+Q F +QL E+++A Q E++ILRTQ LLCDMLLRDAP I TQSP++
Sbjct: 378 FPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVT 437
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY + L+G TP+ES++K IA WL NH TGLSTDSL EAGYPGAA
Sbjct: 438 DLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAA 497
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLE 557
L + VCGMA +I+SKDF+FWFRSHT KE+KWGGAKH P + DNG KMHPRSSFKAFLE
Sbjct: 498 LREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLE 557
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELS 614
VVK RS PWE E++AIHSLQ+++R S Q+ E+ N + V+ + + K+QG+ EL
Sbjct: 558 VVKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANRNNVRSIVKAPPDDTKKIQGLLELR 616
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETATAP+ VD +G INGWN K AELTGLP EA+G+ LID VV +S
Sbjct: 617 TVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVV-VDSIE 675
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ ++ AL G E++N+E+KL+ F Q+ + + ++VN+C SRD V GVCFVGQD+
Sbjct: 676 VVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDL 735
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM+K+TG R +VI
Sbjct: 736 TTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVID 795
Query: 795 KMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L E+F CR+K LTK IL+ I+GQ E FGFF+ G+++E LT
Sbjct: 796 KLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTV 855
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R +AEGK+ G CF+ + P+LQ AL+ Q + + KEL YI QE++NPLNG++
Sbjct: 856 NKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQ 915
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 916 FTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQ 958
>gi|449453752|ref|XP_004144620.1| PREDICTED: phytochrome C-like [Cucumis sativus]
Length = 1119
Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/939 (53%), Positives = 648/939 (69%), Gaps = 27/939 (2%)
Query: 35 GKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQITAYLSKIQRG 90
G ++ DA L +FE S + F+YS SV V + +YL IQRG
Sbjct: 22 GAHVVAQTPIDAKLHVDFE---GSERLFDYSASVDFNAACSTSNVHASTVQSYLLNIQRG 78
Query: 91 GLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGLI--GIDARTLFTPPS 147
L+QPFGCM+AV+ ++ YSEN EMLDL + + E + G D RTLF P
Sbjct: 79 SLVQPFGCMIAVDGENLSVLAYSENAPEMLDLAPHAVPNIEQQEALTFGTDVRTLFRSPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
A+L KAA +E++LLNPILVH R+ KPFYAILHR+DVG++IDLEP D ++ A
Sbjct: 139 AAALQKAADFKEVNLLNPILVHC--RTSGKPFYAILHRVDVGLIIDLEPVNPADVPVTAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA++S KLA AIS+LQ L G+I LLC+ +V++V LTGYDRVM+Y FHDD+HGEVV+E
Sbjct: 197 GALKSYKLAAKAISKLQNLQSGNISLLCEVLVKEVSDLTGYDRVMVYKFHDDEHGEVVAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
RSDLEPY G+H+PA DIPQA+RFLF +N+VRMICDC A PV V+Q + L QPL L S
Sbjct: 257 CCRSDLEPYFGLHYPATDIPQASRFLFLKNKVRMICDCLAPPVKVLQDRRLAQPLSLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIP 378
LR+PHGCH +YM NMGSIASLVM++ IN DS KLWGLVVCHHTSPR++P
Sbjct: 317 ALRAPHGCHARYMMNMGSIASLVMSITINENDSESENDQEKDRKLWGLVVCHHTSPRFVP 376
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+Q F +Q+ E+++ QL EK+ILR Q +LCDMLLRDAP IVTQSP+IM
Sbjct: 377 FPLRYACEFLIQVFGIQINKEVELQAQLKEKHILRIQTVLCDMLLRDAPVGIVTQSPNIM 436
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALY+ + W +GVTPTE+Q+++IA WLL +H TGLSTDSL EAG+ GA+
Sbjct: 437 DLVKCDGAALYFRKKFWSLGVTPTEAQIRNIADWLLKDHSGSTGLSTDSLTEAGFYGASA 496
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG +CGMA RITSKDFLFWFRSH AKE++WGGAKH P +D+G KMHPRSSFKAFLEV
Sbjct: 497 LGDEICGMAAVRITSKDFLFWFRSHMAKEIRWGGAKHDPSDEDDGRKMHPRSSFKAFLEV 556
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK RS PWE E++AIHSLQ+++R S Q+ E E + KV K Q +DEL +
Sbjct: 557 VKRRSQPWEDVEMDAIHSLQLILRGSLQD-EIEEECKVITTVPPVDEKTQQLDELRVITN 615
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETA PI VD G INGWN+K ELTGL EA+G L+D VV+ +S V+
Sbjct: 616 EMVRLIETAAVPILAVDVFGKINGWNSKATELTGLAIQEAIGMPLVDCVVN-DSVKVVKK 674
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
++ A+ G E+KNVE+KL+ F Q+ V + VN+C SRD NNV G+ F+GQD+T +K
Sbjct: 675 MLSLAIQGIEEKNVEIKLKTFGTAVQNGPVILEVNSCCSRDLNNNVVGISFIGQDVTKQK 734
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
++M+++ ++QGDY I+++ + LIPPIF +D C EWN AMEK++G+ R E+ +ML
Sbjct: 735 LVMNQYTQIQGDYTGIMRNPSALIPPIFMADGEGRCLEWNDAMEKLSGFRRVEMTNRMLL 794
Query: 799 REIFG--NF-CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRT 855
E+F NF CR+K LTK I+L++ I+GQ TE F F F +R+G +VE LTAS+RT
Sbjct: 795 GEVFTLENFGCRVKDH-TLTKLRIILHRVISGQDTEKFLFRFCDREGNYVESLLTASKRT 853
Query: 856 DAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHK 915
D EG V G F F+ + P+LQ ALE Q + + + +LAY+RQE++ PL+GI +
Sbjct: 854 DTEGTVTGVFFFLHVASPELQYALEMQRISEQATAENLHKLAYLRQEIRKPLDGIALMQN 913
Query: 916 LLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
L+ SS +S Q+Q ++ + Q+ I+ D++ IEE
Sbjct: 914 LISSSDLSIEQKQLIKLNTLSREQLHKIVHDTDIQSIEE 952
>gi|37779206|gb|AAO86645.1| PHYA4 photoreceptor [Stellaria longipes]
Length = 1122
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/928 (52%), Positives = 642/928 (69%), Gaps = 32/928 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGV-----PEEQITAYLSKIQRGGL 92
II DA L AEFE+S F+YS SV GV ++ ++YL +IQ+G
Sbjct: 22 IIAQTIQDAKLHAEFEES---SNEFDYSSSVRGSTSGVNQLPKSDKVTSSYLLQIQKGKF 78
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQ FGC+LA+++ TFR+I +SEN EML + S + D + G IG + RT+FT PS
Sbjct: 79 IQLFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDLPVIG-IGTNIRTIFTGPSA 137
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
++L KA ++SLLNPILVH + KPFYAI+HR+ +VID EP K + ++ AG
Sbjct: 138 SALQKALGFTDVSLLNPILVHCKNSG--KPFYAIVHRVTRSLVIDFEPVKPYEVPMTAAG 195
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AI+RLQ+LP G++ L DT+V++V +LTGYDRVM Y FHDDDHGEVVSE+
Sbjct: 196 ALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEV 255
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ +L+ YLG+H+PA DIPQAARFLF +N+VR+ICDC A V V+Q ++L L L ST
Sbjct: 256 TKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRVVQDEKLSVDLTLCGST 315
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPR 375
LR+PHGCH QYM NM SI SLVMAV++N +D +LWGLVVCHHTSPR
Sbjct: 316 LRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHKRKRLWGLVVCHHTSPR 375
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q EK ILRTQ LLCDML+RDAP IVTQ+P
Sbjct: 376 FVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLLCDMLMRDAPLGIVTQNP 435
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
++MDLVKCDGAAL Y + W +G+TPT+ QL+DIA WL +H D TGLSTDSL +AGYPG
Sbjct: 436 NVMDLVKCDGAALLYNNKIWKLGITPTDYQLRDIAGWLSRDHTDSTGLSTDSLHDAGYPG 495
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RIT D LFWFRSHTA EVKWGGAKH KD+G KMHPR+SFKAF
Sbjct: 496 ARSLGDTVCGMAAVRITPNDMLFWFRSHTAAEVKWGGAKHETGEKDDGSKMHPRTSFKAF 555
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F+++E + + +++ + ++ G+ EL +
Sbjct: 556 LEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDVEASDLNTSVIHSKISDLQINGLRELEA 615
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PI VD+ G +NGWN K++ELTG+P +EA+GK I + E S
Sbjct: 616 VTSEMVRLIETATVPILAVDADGLVNGWNTKISELTGVPVAEAVGKH-IASLAEESSIDN 674
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL GEE KNV+ ++++ + + ++VNAC S+D NV GVC + QDIT
Sbjct: 675 VKRMLQLALQGEEKKNVQFEIKRHQSNPDSGPISLVVNACASKDVNGNVVGVCLIAQDIT 734
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K +MDKF R++GDY+AIIQS NPLIPPIF +DE CSEWN AM K+TGW R EVI K
Sbjct: 735 GQKTVMDKFTRIEGDYKAIIQSPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWSREEVIDK 794
Query: 796 MLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG CR+K Q+ F I+L ++GQ T+ P FF R G+++E L +
Sbjct: 795 MLLGEVFGTHKSCCRLKNQEAFVNFGIILNGAMSGQNTDKLPIEFFTRFGKYIECLLCVN 854
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
++ D +G V G FCF+Q+ DLQ AL Q L + + K LAY+++++KNPL+GI F
Sbjct: 855 KKLDGDGAVTGVFCFLQLASHDLQHALHIQRLAEQAATKRAKALAYMKRQIKNPLSGIMF 914
Query: 913 VHKLLESSSISENQRQYLETSDACERQI 940
K+L+ + + E+QRQ L+TS C+ Q+
Sbjct: 915 SGKILDGTEMGEDQRQVLQTSIRCQGQL 942
>gi|327342186|gb|AEA50880.1| phyA [Populus tremula]
Length = 958
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/943 (51%), Positives = 651/943 (69%), Gaps = 31/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVIS-----PPEGVPEEQITAYLSKIQRGGL 92
II DA L A+FE+S +S + R S PP ++ TAYL IQ+G L
Sbjct: 22 IIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRS--DKVTTAYLHHIQKGKL 79
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGC+LA++E TFR++ YSEN E+L + S + + + G IG D RT+FT PS
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLG-IGTDIRTIFTAPSA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
++L KA ++SLLNPILVH + KPFYAI+HR+ ++ID EP K + ++ AG
Sbjct: 139 SALQKAMGFGDVSLLNPILVHCKTSG--KPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR M Y FHDDDHGEVVSE+
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEV 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ +EPYLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L ST
Sbjct: 257 TKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGST 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPR 375
LR+PH CHLQYM NM SIASLVMAV++N D +LWGLVVCH+TSPR
Sbjct: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPR 376
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+RDAP IVTQSP
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSP 436
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVKCDGA L+Y + W +G+TP++ QL+DIA+WL H D TGLSTDSL +AGYPG
Sbjct: 437 NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RITSKD LFWFRS TA E++WGGAKH P KD+G +MHPRSSFKAF
Sbjct: 497 ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F+++E + + + + K++G+ EL +
Sbjct: 557 LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PI VD G +NGWN K++ELTGL +A+GK L+ +V + S
Sbjct: 617 VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLL-TLVEDSSVDI 675
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G+E++N++ +++ + + + ++VNAC SRD NV GVCFVGQDIT
Sbjct: 676 VKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDIT 735
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K++MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN AM +TGW R EV+ K
Sbjct: 736 GQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDK 795
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG CR+K Q+ ++L +TGQ +E FGFF R G++VE L S
Sbjct: 796 MLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVS 855
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
++ D EG V G FCF+Q+ +LQ AL Q L + ++K LAY+++++ NPL+GI F
Sbjct: 856 KKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIF 915
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
K++E + + Q++ L TS C+ Q+ I+D DL I EG
Sbjct: 916 SGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEG 958
>gi|3914343|sp|O49934.1|PHYA_POPTM RecName: Full=Phytochrome A
gi|2664190|emb|CAA04679.1| phytochrome A [Populus tremula x Populus tremuloides]
Length = 1125
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/943 (51%), Positives = 651/943 (69%), Gaps = 31/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVIS-----PPEGVPEEQITAYLSKIQRGGL 92
II DA L A+FE+S +S + R S PP ++ TAYL IQ+G L
Sbjct: 22 IIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRS--DKVTTAYLHHIQKGKL 79
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGC+LA++E TFR++ YSEN E+L + S + + + G IG D RT+FT PS
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLG-IGTDIRTIFTAPSA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
++L KA ++SLLNPILVH + KPFYAI+HR+ ++ID EP K + ++ AG
Sbjct: 139 SALQKAMGFGDVSLLNPILVHCKTSG--KPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR M Y FHDDDHGEVVSE+
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEV 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ +EPYLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L ST
Sbjct: 257 TKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGST 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPR 375
LR+PH CHLQYM NM SIASLVMAV++N D +LWGLVVCH+TSPR
Sbjct: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPR 376
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+RDAP IVTQSP
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSP 436
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVKCDGA L+Y + W +G+TP++ QL+DIA+WL H D TGLSTDSL +AGYPG
Sbjct: 437 NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RITSKD LFWFRS TA E++WGGAKH P KD+G +MHPRSSFKAF
Sbjct: 497 ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F+++E + + + + K++G+ EL +
Sbjct: 557 LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PI VD G +NGWN K++ELTGL +A+GK L+ +V + S
Sbjct: 617 VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLL-TLVEDSSVDI 675
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G+E++N++ +++ + + + ++VNAC SRD NV GVCFVGQDIT
Sbjct: 676 VKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDIT 735
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K++MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN AM +TGW R EV+ K
Sbjct: 736 GQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDK 795
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG CR+K Q+ ++L +TGQ +E FGFF R G++VE L S
Sbjct: 796 MLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVS 855
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
++ D EG V G FCF+Q+ +LQ AL Q L + ++K LAY+++++ NPL+GI F
Sbjct: 856 KKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIF 915
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
K++E + + Q++ L TS C+ Q+ I+D DL I EG
Sbjct: 916 SGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEG 958
>gi|39980624|gb|AAR33032.1| phytochrome C [Sorghum propinquum]
Length = 1135
Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/943 (53%), Positives = 654/943 (69%), Gaps = 35/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
++ DA L AEFE +S ++F+YS SV I P V ++ Y +QRG IQ
Sbjct: 25 VVAQTPVDAQLHAEFE---SSQRNFDYSSSVSAAIRP--SVSTSTVSTYHQTMQRGLYIQ 79
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASL 151
PFGC+LAV TF ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++
Sbjct: 140 HKAATFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALK 197
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV+SE RRS
Sbjct: 198 SYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRS 257
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A V +IQ L QPL L STLR+
Sbjct: 258 DLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRA 317
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIP 378
HGCH QYM NMGS+ASLVM+V I++ + KLWGLVVCHHTSPR++P
Sbjct: 318 SHGCHAQYMANMGSVASLVMSVTISNDEEEDGDPGSDQQPKGRKLWGLVVCHHTSPRFVP 377
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+Q F +QL E+++ Q E++ILRTQ LLCDMLLRDAP I TQSP++M
Sbjct: 378 FPLRYACEFLLQVFGIQLNKEVELVAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVM 437
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY + L+G TP+ES++K IA WL NH TGLSTDSL EAGYPGAA
Sbjct: 438 DLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAA 497
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLE 557
L + VCGMA +I+SKDF+FWFRSHT KE+KWGGAKH P + DNG KMHPRSSFKAFLE
Sbjct: 498 LREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLE 557
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELS 614
VVK RS PWE E++AIHSLQ+++R S Q+ E+ N + V+ + + K+QG+ EL
Sbjct: 558 VVKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANRNNVRSIVKAPLDDTKKIQGLLELR 616
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETATAP+ VD +G INGWN K AELTGLP EA+G+ L+D VV +S
Sbjct: 617 TVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLVDLVV-VDSIE 675
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ ++ AL G E++N+E+KL+ F Q+ + + ++VN+C SRD V GVCFVGQD+
Sbjct: 676 VVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDL 735
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K++MDK+ R+QGDY AI+++ + LIPPIF + C EWN AM+K+TG R +VI
Sbjct: 736 TTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMISDLGSCLEWNKAMQKITGIQREDVID 795
Query: 795 KMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L E+F CR+K LTK IL+ I+GQ E FGFF+ G+++E LT
Sbjct: 796 KLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTV 855
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R +AEGK+ G CF+ + P+LQ AL+ Q + + KEL YI QE++NPLNG++
Sbjct: 856 NKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQ 915
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 916 FTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQ 958
>gi|108711122|gb|ABF98917.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
Length = 957
Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/920 (52%), Positives = 639/920 (69%), Gaps = 33/920 (3%)
Query: 23 KSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEGVPEEQIT 81
+SS A+ K ++ DA L AEFE S + F+YS SV + G ++
Sbjct: 14 RSSSARSK---HSARVVAQTPMDAQLHAEFE---GSQRHFDYSSSVGAANRSGATTSNVS 67
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGID 138
AYL +QRG +QPFGC+LAV TF ++ YSEN EMLDL + D +G D
Sbjct: 68 AYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREALAVGTD 127
Query: 139 ARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSK 198
RTLF S +L KAA +++LLNPILVH+ R+ KPFYAI+HRIDVG+VIDLEP
Sbjct: 128 VRTLFRSHSFVALQKAATFGDVNLLNPILVHA--RTSGKPFYAIMHRIDVGLVIDLEPVN 185
Query: 199 SGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHD 258
D ++ GA++S KLA AI+RLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+
Sbjct: 186 PVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHE 245
Query: 259 DDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKEL 318
D+HGEV++E +RSDLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L
Sbjct: 246 DEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQDDSL 305
Query: 319 KQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWG 365
QP+ + STLR+PHGCH QYM +MGS+ASLVM+V IN + KLWG
Sbjct: 306 TQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGRKLWG 365
Query: 366 LVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRD 425
L+VCHHTSPR++PFPLRYACEFL+Q F +Q+ E+++A Q E++ILRTQ LLCDMLLRD
Sbjct: 366 LMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDMLLRD 425
Query: 426 APFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLST 485
AP I TQSP++MDLVKCDGAALYY + W++G TP+E+++K+I WL H TGLST
Sbjct: 426 APVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGSTGLST 485
Query: 486 DSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGG 544
DSL EAGYPGAA LG VCGMA +I+SKDF+FWFRSHTAKE+KWGGAKH P + DNG
Sbjct: 486 DSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDADDNGR 545
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME---EENDSKVQGNTQ 601
KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S Q+ + N +
Sbjct: 546 KMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIVTAPS 605
Query: 602 QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGK 661
+ K+QG+ EL +V EMVRLIETATAPI VD +G+INGWN K AELTGLP EA+GK
Sbjct: 606 DDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVMEAIGK 665
Query: 662 SLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYK 721
L+D V+ ++S V+ ++ AL G E++N+++KL+ F Q+ + V ++VNAC SRD
Sbjct: 666 PLVDLVI-DDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSRDLS 724
Query: 722 NNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAM 781
V GVCFV QD+T + ++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM
Sbjct: 725 EKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNEAM 784
Query: 782 EKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFF 838
+K+TG R + + K+L E+F + CR+K LTK IL+ I+GQ E FGFF
Sbjct: 785 QKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLFGFF 844
Query: 839 NRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAY 898
N G+++E +TA++RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL Y
Sbjct: 845 NTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKELTY 904
Query: 899 IRQEVKNPLNGIRFVHKLLE 918
IRQE++NPLNG+ + +L+
Sbjct: 905 IRQELRNPLNGMLELEAMLQ 924
>gi|224122788|ref|XP_002318913.1| phytochrome [Populus trichocarpa]
gi|222857289|gb|EEE94836.1| phytochrome [Populus trichocarpa]
Length = 1126
Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/943 (51%), Positives = 650/943 (68%), Gaps = 31/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVIS-----PPEGVPEEQITAYLSKIQRGGL 92
II DA L A+FE+S +S + R S PP ++ T YL IQ+G L
Sbjct: 22 IIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRS--DKVTTTYLHHIQKGKL 79
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGC+LA++E TF+++ YSEN E+L + S + + + G IG D RT+FT PS
Sbjct: 80 IQPFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPVLG-IGTDIRTIFTAPSA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
++L KA ++SLLNPILVH + KPFYAI+HR+ ++ID EP K + ++ AG
Sbjct: 139 SALQKAMGFGDVSLLNPILVHCKTSG--KPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR M Y FHDDDHGEVVSE+
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEV 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ +EPYLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L ST
Sbjct: 257 TKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGST 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPR 375
LR+PH CHLQYM NM SIASLVMAV++N D +LWGLVVCH+TSPR
Sbjct: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQKRKRLWGLVVCHNTSPR 376
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+RDAP IVTQSP
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSP 436
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVKCDGA L+Y + W +G+TP++ QL+DIA+WL H D TGLSTDSL +AGYPG
Sbjct: 437 NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RITSKD LFWFRS TA E++WGGAKH P KD+G +MHPRSSFKAF
Sbjct: 497 ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F+++E + + + + K++G+ EL +
Sbjct: 557 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PI VD G +NGWN K++ELTGL +A+GK L+ +V + S
Sbjct: 617 VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLL-TLVEDSSVDI 675
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G+E++N++ +++ + + + ++VNAC SRD NV GVCFVGQDIT
Sbjct: 676 VKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDIT 735
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K++MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN AM +TGW R EV+ K
Sbjct: 736 GQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDK 795
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG CR+K Q+ ++L +TGQ +E FGFF R G++VE L S
Sbjct: 796 MLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVS 855
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
++ D EG V G FCF+Q+ +LQ AL Q L + ++K LAY+++++ NPL+GI F
Sbjct: 856 KKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKRQIWNPLSGIIF 915
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
K++E + + Q++ L TS C+ Q+ I+D DL I EG
Sbjct: 916 SGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEG 958
>gi|39980592|gb|AAR33016.1| phytochrome C [Sorghum bicolor]
gi|39980594|gb|AAR33017.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 989 bits (2557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/943 (53%), Positives = 655/943 (69%), Gaps = 35/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
++ DA L AEFE +S ++F+YS SV I P V ++ Y +QRG IQ
Sbjct: 25 VVAQTPVDAQLHAEFE---SSQRNFDYSSSVSAAIRP--SVSTSTVSTYHQTMQRGLYIQ 79
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASL 151
PFGC+LAV TF ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++
Sbjct: 140 HKAATFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALK 197
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV+SE RRS
Sbjct: 198 SYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRS 257
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A V +IQ L QPL L STLR+
Sbjct: 258 DLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRA 317
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIP 378
HGCH QYM NMGS+ASLVM+V I++ + KLWGLVVCHHTSPR++P
Sbjct: 318 SHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVP 377
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+Q F +QL E+++A Q E++ILRTQ LL DMLLRDAP I TQSP++M
Sbjct: 378 FPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWDMLLRDAPVGIFTQSPNVM 437
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYY + L+G TP+ES++K IA WL NH TGLSTDSL EAGYPGAA
Sbjct: 438 DLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAA 497
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLE 557
L + VCGMA +I+SKDF+FWFRSHT KE+KWGGAKH P + DNG KMHPRSSFKAFLE
Sbjct: 498 LREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLE 557
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELS 614
VVK RS PWE E++AIHSLQ+++R S Q+ E+ N + V+ + + K+QG+ EL
Sbjct: 558 VVKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANRNNVRSIVKAPPDDTKKIQGLLELR 616
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETATAP+ VD +G INGWN K AELTGLP EA+G+ LID VV +S
Sbjct: 617 TVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVV-VDSIE 675
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ ++ AL G E++N+E+KL+ F Q+ + + ++VN+C SRD V GVCFVGQD+
Sbjct: 676 VVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDL 735
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM+K+TG R +VI
Sbjct: 736 TTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVID 795
Query: 795 KMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L E+F CR+K LTK IL+ I+GQ E FGFF+ G+++E LT
Sbjct: 796 KLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTV 855
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R +AEGK+ G CF+ + P+LQ AL+ Q + + KEL YI QE++NPLNG++
Sbjct: 856 NKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQ 915
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 916 FTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQ 958
>gi|9049364|dbj|BAA99408.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/962 (51%), Positives = 662/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PSQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH + + KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSA--KPFYAIVHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
++D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + +EPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLYEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG AVCGMA RI+SKD +FWFRSHTA EV+WGGAKH
Sbjct: 479 HTDSTGLSTDSLYDAGFPKALSLGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP
Sbjct: 599 FIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG CR+K Q+ I+L +T Q +E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQTACCRLKNQEAFVNLGIVLNSAVTSQESEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G+++E L S++ D EG V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K LAYI+++++NPL+GI F K++E + + QRQ L+TS C++Q+ ++D DL I
Sbjct: 898 KTLAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILQTSSLCQKQLSKVLDDSDLERII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|449506938|ref|XP_004162889.1| PREDICTED: LOW QUALITY PROTEIN: phytochrome C-like [Cucumis
sativus]
Length = 1119
Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/939 (52%), Positives = 647/939 (68%), Gaps = 27/939 (2%)
Query: 35 GKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQITAYLSKIQRG 90
G ++ DA L +FE S + F+YS SV V + +YL IQRG
Sbjct: 22 GAHVVAQTPIDAKLHVDFE---GSERLFDYSASVDFNAACSTSNVHASTVQSYLLNIQRG 78
Query: 91 GLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGLI--GIDARTLFTPPS 147
L+QPFGCM+AV+ ++ YSEN EMLDL + + E + G D RTLF P
Sbjct: 79 SLVQPFGCMIAVDGENLSVLAYSENAPEMLDLAPHAVPNIEQQEALTFGTDVRTLFRSPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
A+L KAA +E++LLNPILVH R+ KPFYAILHR+DVG++IDLEP D ++ A
Sbjct: 139 AAALQKAADFKEVNLLNPILVHC--RTSGKPFYAILHRVDVGLIIDLEPVNPADVPVTAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA++S KLA AIS+LQ L G+I LLC+ +V++V LTGYDRVM+Y FHDD+HGEVV+E
Sbjct: 197 GALKSYKLAAKAISKLQNLQSGNISLLCEVLVKEVSDLTGYDRVMVYKFHDDEHGEVVAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
RSDLEPY G+H+PA DIPQA+RFLF +N+VRMICDC A PV V+Q + L QPL L S
Sbjct: 257 CCRSDLEPYFGLHYPATDIPQASRFLFLKNKVRMICDCLAPPVKVLQDRRLAQPLSLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIP 378
LR+PHGCH +YM NMGSIASLVM++ IN DS KLWGLVVCHHTSPR++P
Sbjct: 317 ALRAPHGCHARYMMNMGSIASLVMSITINENDSESENDQEKDRKLWGLVVCHHTSPRFVP 376
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+Q F +Q+ E+++ QL EK+ILR Q +LCDMLLRDAP IVTQSP+IM
Sbjct: 377 FPLRYACEFLIQVFGIQINKEVELQAQLKEKHILRIQTVLCDMLLRDAPVGIVTQSPNIM 436
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALY+ + W +GVTPTE+Q+++IA WLL +H TGLSTDSL EAG+ GA+
Sbjct: 437 DLVKCDGAALYFRKKFWSLGVTPTEAQIRNIADWLLKDHSGSTGLSTDSLTEAGFYGASA 496
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG +CGMA RITSKDFLFWFRSH AKE++WGGAKH P +D+G KMHPRSSFKAFLEV
Sbjct: 497 LGDEICGMAAVRITSKDFLFWFRSHMAKEIRWGGAKHDPSDEDDGRKMHPRSSFKAFLEV 556
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK RS PWE E++AIHSLQ+++R S Q+ E E + KV K Q +DEL +
Sbjct: 557 VKRRSQPWEDVEMDAIHSLQLILRGSLQD-EIEEECKVITTVPPVDEKTQQLDELRVITN 615
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETA PI VD G INGWN+K ELTGL EA+G L+D VV+ +S V+
Sbjct: 616 EMVRLIETAAVPILAVDVFGKINGWNSKATELTGLAIQEAIGMPLVDCVVN-DSVKVVKK 674
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
++ A+ G E+KNVE+KL+ F Q+ V + VN+C SRD NNV G+ F+GQD+T +K
Sbjct: 675 MLSLAIQGIEEKNVEIKLKTFGTAVQNGPVILEVNSCCSRDLNNNVVGIXFIGQDVTKQK 734
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
++M+++ ++QGDY I+++ + LIPP F +D C EWN AMEK++G+ R E+ +ML
Sbjct: 735 LVMNQYTQIQGDYTGIMRNPSALIPPXFMADGEGRCLEWNDAMEKLSGFRRVEMTNRMLL 794
Query: 799 REIFG--NF-CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRT 855
E+F NF CR+K LTK I+L++ I+GQ TE F F F +R+G +VE LTAS+RT
Sbjct: 795 GEVFTLENFGCRVKDH-TLTKLRIILHRVISGQDTEKFLFRFCDREGNYVESLLTASKRT 853
Query: 856 DAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHK 915
D EG V G F F+ + P+LQ ALE Q + + + +LAY+RQE++ PL+GI +
Sbjct: 854 DTEGTVTGVFFFLHVASPELQYALEMQRISEQATAENLHKLAYLRQEIRKPLDGIALMQN 913
Query: 916 LLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
L+ SS +S Q+Q ++ + Q+ I+ D++ IEE
Sbjct: 914 LISSSDLSIEQKQLIKLNTLSREQLHKIVHDTDIQSIEE 952
>gi|11134032|sp|P93528.1|PHYC_SORBI RecName: Full=Phytochrome C
gi|1800219|gb|AAB41399.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/943 (53%), Positives = 654/943 (69%), Gaps = 35/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
++ DA L AEFE +S ++F+YS SV I P V ++ Y +QRG IQ
Sbjct: 25 VVAQTPVDAQLHAEFE---SSQRNFDYSSSVSAAIRP--SVSTSTVSTYHQTMQRGLYIQ 79
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASL 151
PFGC+LAV TF ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++
Sbjct: 140 HKAATFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALK 197
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV+SE RRS
Sbjct: 198 SYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRS 257
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A V +IQ L QPL L STLR+
Sbjct: 258 DLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRA 317
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIP 378
HGCH QYM NMGS+ASLVM+V I++ + KLWGLVVCHHTSPR++P
Sbjct: 318 SHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVP 377
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+Q F +QL E+++A Q E++ILRTQ LL DMLLRDAP I TQSP++M
Sbjct: 378 FPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWDMLLRDAPVGIFTQSPNVM 437
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDG ALYY + L+G TP+ES++K IA WL NH TGLSTDSL EAGYPGAA
Sbjct: 438 DLVKCDGVALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAA 497
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLE 557
L + VCGMA +I+SKDF+FWFRSHT KE+KWGGAKH P + DNG KMHPRSSFKAFLE
Sbjct: 498 LREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLE 557
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELS 614
VVK RS PWE E++AIHSLQ+++R S Q+ E+ N + V+ + + K+QG+ EL
Sbjct: 558 VVKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANRNNVRSIVKAPPDDTKKIQGLLELR 616
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETATAP+ VD +G INGWN K AELTGLP EA+G+ LID VV +S
Sbjct: 617 TVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVV-VDSIE 675
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ ++ AL G E++N+E+KL+ F Q+ + + ++VN+C SRD V GVCFVGQD+
Sbjct: 676 VVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDL 735
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM+K+TG R +VI
Sbjct: 736 TTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVID 795
Query: 795 KMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L E+F CR+K LTK IL+ I+GQ E FGFF+ G+++E LT
Sbjct: 796 KLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTV 855
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R +AEGK+ G CF+ + P+LQ AL+ Q + + KEL YI QE++NPLNG++
Sbjct: 856 NKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQ 915
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 916 FTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQ 958
>gi|449458035|ref|XP_004146753.1| PREDICTED: phytochrome A-like [Cucumis sativus]
Length = 1123
Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/943 (52%), Positives = 649/943 (68%), Gaps = 32/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
II + DA L A+FE+S G SF+YS SV + + Q TAYL IQ+G
Sbjct: 22 IIAQTSVDAKLHADFEES---GNSFDYSSSVRVSSDVSGDHQPRSDKVTTAYLHHIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E TF++I YSEN EML + S + D+ + G IG D RT+FT PS
Sbjct: 79 LIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLG-IGTDVRTIFTAPS 137
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
++L KA E++LLNPILVH + KPFYAI+HR+ ++ID EP K + ++ A
Sbjct: 138 ASALLKALGFGEVTLLNPILVHCKTSG--KPFYAIVHRVTGSLIIDFEPVKPYEVPVTAA 195
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEV+SE
Sbjct: 196 GALQSYKLAAKAITRLQSLPSGCMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISE 255
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC A + V+Q ++L+ L L S
Sbjct: 256 VTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGS 315
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPR 375
TLR+PH CHLQYM NM SIASLVMAV++N D +LWGLVVCH+TSPR
Sbjct: 316 TLRAPHSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPALQQQKRKRLWGLVVCHNTSPR 375
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+RDAP IV++SP
Sbjct: 376 FVPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSP 435
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVK DGAAL Y + W +G+TP++ L+DIA WL H D TGLSTDSL +AGYPG
Sbjct: 436 NIMDLVKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLAEYHMDSTGLSTDSLYDAGYPG 495
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RIT+ D +FWFRSHTA E++WGGAKH KD+G KMHPRSSFKAF
Sbjct: 496 ALALGDEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAKHEHGEKDDGRKMHPRSSFKAF 555
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F++ + + ++ K++G EL S
Sbjct: 556 LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEINRKSIQMTLGDLKIEGRQELES 615
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PI VD G INGWN K+AELTGLP +A+GK L+ +V + S
Sbjct: 616 VTSEMVRLIETATVPILAVDVDGLINGWNTKIAELTGLPVDKAIGKHLL-TLVEDTSVEV 674
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G+E++NV+ +++ + + ++VNAC SRD + NV GVCFV QDIT
Sbjct: 675 VKKMLYLALQGQEEQNVQFEIKTHGSHIEVGSIRLVVNACASRDLRENVVGVCFVAQDIT 734
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K++MDKF RL+GDY+AI+Q+ NPLIPPIF SD+ CSEWNAAM K+TGW R EVI K
Sbjct: 735 GQKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDQFGWCSEWNAAMTKLTGWSREEVIDK 794
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG + CR+K Q+ ++L ++GQ E FGFF R G +VE L +
Sbjct: 795 MLLGEVFGAHKSCCRLKNQEAFVNLGVVLNNAMSGQDPEKVSFGFFGRNGMYVECLLCVN 854
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+ D +G V G FCF+Q+ +LQ AL Q L + +++ L YI++ ++NPL+GI F
Sbjct: 855 KILDKDGVVTGVFCFLQLASHELQQALNIQRLCEQTALKRLRALGYIKRHIQNPLSGIIF 914
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+LLE + + QR+ L TS C++QI +++ DL I +G
Sbjct: 915 SRRLLERTELGTEQREILLTSLHCQKQISKVLEESDLDQIIDG 957
>gi|422898333|dbj|BAM67032.1| phytochrome a [Chrysanthemum seticuspe f. boreale]
Length = 1121
Score = 986 bits (2548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/964 (50%), Positives = 657/964 (68%), Gaps = 37/964 (3%)
Query: 18 NTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV------ISP 71
++ P +SS + + + II DA L A+FE+S G SF+YS SV I
Sbjct: 3 SSRPTESSTNSARSKHSAR-IIQQTTVDAKLDADFEES---GDSFDYSSSVHVSTTVIDG 58
Query: 72 PEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----- 126
+ ++ TAYL IQ+G LIQPFGC+LA++E TF++I +SEN EML + S +
Sbjct: 59 QQPRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHTVPTVG 118
Query: 127 EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRI 186
E+ L IG D RT+F PS +L KA E+SLLNPILVH + KPFYAI+HR+
Sbjct: 119 ENPVLG--IGTDVRTIFAGPSATALFKALGFGEVSLLNPILVHCKTSG--KPFYAIIHRV 174
Query: 187 DVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLT 246
++ID EP + ++ AGA+QS K A AI+RLQ+LP G I LCDT+V++V +LT
Sbjct: 175 TGSLIIDFEPVMPNEVPMTAAGALQSYKHAAKAIARLQSLPSGSIERLCDTMVQEVFELT 234
Query: 247 GYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCH 306
GYDRVM Y FHDDDHGEVV+EI + L+PYLG+H+PA DIPQAARFLF +N+VRMICDC
Sbjct: 235 GYDRVMAYKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCR 294
Query: 307 AIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------ 360
A V V+Q K+L L L S LR+PH CHLQYM NM SIASLVMAV+IN D
Sbjct: 295 AKNVKVVQDKKLPFDLTLCGSNLRAPHSCHLQYMDNMTSIASLVMAVVINDMDEEGQTSE 354
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
KLWGLVVCH+T+PR++PFPLR+ACEFL Q F++ + EL++ Q+ EKNILRTQ
Sbjct: 355 PQKRKKLWGLVVCHNTTPRFVPFPLRFACEFLAQVFAIHINKELELENQILEKNILRTQT 414
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCD+L+RDAP IV+QSP+IMDLVKCDGAAL Y + + +GV+PT+SQ+ DI WL
Sbjct: 415 LLCDLLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKVYRMGVSPTDSQIHDIVSWLYEY 474
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AGYPGA LG VCGMA+ R+T KD LFWFRS+TA E++WGGAKH
Sbjct: 475 HMDSTGLSTDSLYDAGYPGALALGDVVCGMASVRLTEKDILFWFRSNTASEIRWGGAKHE 534
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ--EMEEENDS 594
KD+G +MHPRSSFKAFLEVV+ RSFPW+ E++AIHSLQ++MR++ + E+ E
Sbjct: 535 KGEKDDGKRMHPRSSFKAFLEVVRMRSFPWKDFEMDAIHSLQLIMRNALKDNEVAELKTD 594
Query: 595 KVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLP 654
+Q N K+ G+ EL +V EMVRLIETA+ PI VD+ G++NGWN K+AELTGL
Sbjct: 595 VIQAGF--NELKLDGMQELEAVTSEMVRLIETASVPILAVDADGSVNGWNTKIAELTGLT 652
Query: 655 ASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNA 714
EA+G +L+ +V + S V+ ++ AL G+E+ V+ +++ + +++ + ++VNA
Sbjct: 653 VEEAIGSNLL-TLVEDSSVETVQKMLNLALEGKEESGVQFEIKTYGSRRESGPITLVVNA 711
Query: 715 CTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACC 774
C SRD NV GVC + QDITH+K +MDKF R++GDY+AI+ + NPLIPPIF +DE C
Sbjct: 712 CASRDVHENVVGVCCIAQDITHQKTIMDKFTRIEGDYKAIVHNPNPLIPPIFGTDEFGWC 771
Query: 775 SEWNAAMEKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTE 831
SEWN AM +++G R +VI KML E+FG CR+ ++ I+L + +T + E
Sbjct: 772 SEWNQAMTELSGLSREQVIDKMLLGEVFGTHAASCRLSNEESFINLSIVLNKAMTSEEAE 831
Query: 832 NFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYA 891
FGFF + G++V+ L AS+R D+EG V G FCF+Q+ DLQ A+ Q + +
Sbjct: 832 KISFGFFAKNGKYVDCMLCASKRVDSEGTVTGLFCFLQLASKDLQQAIHFQRMSEQIAAK 891
Query: 892 KIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRC 951
++K LAY+R+++KNPL+GI F K++E + + + Q++ L TS C++Q+ ++D DL
Sbjct: 892 RLKALAYVRRQIKNPLSGIIFSRKMMEGTELGDEQKELLHTSALCQKQLNKVLDDTDLDS 951
Query: 952 IEEG 955
I +G
Sbjct: 952 IVDG 955
>gi|297849258|ref|XP_002892510.1| hypothetical protein ARALYDRAFT_471053 [Arabidopsis lyrata subsp.
lyrata]
gi|297338352|gb|EFH68769.1| hypothetical protein ARALYDRAFT_471053 [Arabidopsis lyrata subsp.
lyrata]
Length = 1122
Score = 985 bits (2547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/962 (51%), Positives = 662/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PTQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH + + KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSA--KPFYAIIHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
++D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDASTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMLEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL+Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH
Sbjct: 479 HMDSTGLSTDSLHDAGFPKALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTN 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGL
Sbjct: 599 VIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G++VE L S++ D EG V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K LAYI+++++NPL+GI F K++E + + QR+ L+TS C++Q+ I+D DL I
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|449505651|ref|XP_004162532.1| PREDICTED: LOW QUALITY PROTEIN: phytochrome A-like [Cucumis
sativus]
Length = 1123
Score = 985 bits (2546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/943 (51%), Positives = 648/943 (68%), Gaps = 32/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
II + DA L A+FE+S G SF+YS SV + + Q TAYL IQ+G
Sbjct: 22 IIAQTSVDAKLHADFEES---GNSFDYSSSVRVSSDVSGDHQPRSDKVTTAYLHHIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++ TF++I YSEN EML + S + D+ + G IG D RT+FT PS
Sbjct: 79 LIQPFGCLLALDXKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLG-IGTDVRTIFTAPS 137
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
++L KA E++LLNPILVH + KPFYAI+HR+ ++ID EP K + ++ A
Sbjct: 138 ASALLKALGFGEVTLLNPILVHCKTSG--KPFYAIVHRVTGSLIIDFEPVKPYEVPVTAA 195
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEV+SE
Sbjct: 196 GALQSYKLAAKAITRLQSLPSGCMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISE 255
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC A + V+Q ++L+ L L S
Sbjct: 256 VTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGS 315
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPR 375
TLR+PH CHLQYM NM SIASLVMAV++N D +LWGLVVCH+TSPR
Sbjct: 316 TLRAPHSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPALQQQKRKRLWGLVVCHNTSPR 375
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+RDAP IV++SP
Sbjct: 376 FVPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSP 435
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVK DGAAL Y + W +G+TP++ L+DIA WL H D TGLSTDSL +AGYPG
Sbjct: 436 NIMDLVKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLAEYHMDSTGLSTDSLYDAGYPG 495
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RIT+ D +FWFRSHTA E++WGGAKH KD+G KMHPRSSFKAF
Sbjct: 496 ALALGDEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAKHEHGEKDDGRKMHPRSSFKAF 555
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F++ + + ++ K++G EL S
Sbjct: 556 LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEINRKSIQMTLGDLKIEGRQELES 615
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PI VD G INGWN K+AELTGLP +A+GK L+ +V + S
Sbjct: 616 VTSEMVRLIETATVPILAVDVDGLINGWNTKIAELTGLPVDKAIGKHLL-TLVEDTSVEV 674
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G+E++NV+ +++ + + ++VNAC SRD + NV GVCFV QDIT
Sbjct: 675 VKKMLYLALQGQEEQNVQFEIKTHGSHIEVGSIRLVVNACASRDLRENVVGVCFVAQDIT 734
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K++MDKF RL+GDY+AI+Q+ NPLIPPIF SD+ CSEWNAAM K+TGW R EVI K
Sbjct: 735 GQKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDQFGWCSEWNAAMTKLTGWSREEVIDK 794
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG + CR+K Q+ ++L ++GQ E FGFF R G +VE L +
Sbjct: 795 MLLGEVFGAHKSCCRLKNQEAFVNLGVVLNNAMSGQDPEKVSFGFFGRNGMYVECLLCVN 854
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+ D +G V G FCF+Q+ +LQ AL Q L + +++ L YI++ ++NPL+GI F
Sbjct: 855 KILDKDGVVTGVFCFLQLASHELQQALNIQRLCEQTALKRLRALGYIKRHIQNPLSGIIF 914
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+LLE + + QR+ L TS C++QI +++ DL I +G
Sbjct: 915 SRRLLERTELGTEQREILLTSLHCQKQISKVLEESDLDQIIDG 957
>gi|240119377|dbj|BAH79237.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 984 bits (2543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/962 (51%), Positives = 660/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PSQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH + + KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSA--KPFYAIVHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
++D EP K + +++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVSMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + +EPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q K+L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG +VCGMA RI+ KD +FWFRSHTA EV+WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK L+ +V + S V+ ++ AL G E++NV+ +++ + ++VNAC
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD N+ GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q +E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G++VE L S++ D EG V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K LAYI+++++NPL+GI F K++E + + QRQ L TS C+ Q+ ++D DL I
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|15217562|ref|NP_172428.1| phytochrome A [Arabidopsis thaliana]
gi|6093714|sp|P14712.2|PHYA_ARATH RecName: Full=Phytochrome A; AltName: Full=Protein ELONGATED
HYPOCOTYL 8; AltName: Full=Protein FAR RED ELONGATED 1;
AltName: Full=Protein FAR RED ELONGATED HYPOCOTYL 2
gi|404670|gb|AAA21351.1| phytochrome A [Arabidopsis thaliana]
gi|3482934|gb|AAC33219.1| phytochrome A [Arabidopsis thaliana]
gi|14517372|gb|AAK62577.1| At1g09570/F14J9_27 [Arabidopsis thaliana]
gi|332190341|gb|AEE28462.1| phytochrome A [Arabidopsis thaliana]
Length = 1122
Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/962 (51%), Positives = 659/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PTQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH R+ KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHC--RTSAKPFYAIIHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
+ID EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH
Sbjct: 479 HMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTK 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGL
Sbjct: 599 VIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK + +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC
Sbjct: 659 EAIGKHFL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G++VE L S++ D EG V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K LAYI+++++NPL+GI F K++E + + QR+ L+TS C++Q+ I+D DL I
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|240119375|dbj|BAH79236.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/962 (51%), Positives = 660/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PSQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH + + KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSA--KPFYAIVHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
++D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + +EPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q K+L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG +VCGMA RI+ KD +FWFRSHTA EV+WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK L+ +V + S V+ ++ AL G E++NV+ +++ + ++VNAC
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD N+ GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q +E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G++VE L S++ D EG+V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGEVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K LAYI+++++NPL+GI F K++E + + QRQ L TS C+ Q+ ++D DL I
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|240119379|dbj|BAH79238.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 982 bits (2539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/962 (51%), Positives = 659/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PSQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH + + KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSA--KPFYAIVHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
++D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + +EPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q K+L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG +VCGMA RI+ KD +FWFRSHTA EV+WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK L+ +V + S V+ ++ AL G E++NV+ +++ + ++VNAC
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD N+ GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q +E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G++VE L S++ D EG V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K LAYI+++++NPL+GI F K++E + + QRQ L TS C+ Q+ ++D DL I
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|240119373|dbj|BAH79235.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/962 (50%), Positives = 660/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PSQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH + + KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSA--KPFYAIVHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
++D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + +EPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q K+L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDM++RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMMMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG +VCGMA RI+ KD +FWFRSHTA EV+WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK L+ +V + S V+ ++ AL G E++NV+ +++ + ++VNAC
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD N+ GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q +E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G++VE L S++ D EG+V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGEVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K LAYI+++++NPL+GI F K++E + + QRQ L TS C+ Q+ ++D DL I
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|240119389|dbj|BAH79243.1| phytochrome A [Cardamine resedifolia]
Length = 1122
Score = 981 bits (2537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/962 (50%), Positives = 660/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PSQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH + + KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSA--KPFYAIVHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
++D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGY+R
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYER 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + +EPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISSKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK L+ +V + S V ++ AL G E++NV+ +++ + ++VNAC
Sbjct: 659 EAIGKHLLT-LVEDSSVEIVRRMLENALEGNEEQNVQFEIKTHLSMADTGPISLVVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD N+ GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q +E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G++VE L S++ D EG V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K LAYI+++++NPL+GI F K++E + + QRQ L TS C++Q+ ++D DL I
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQKQLSKVLDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|240119385|dbj|BAH79241.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 981 bits (2537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/962 (51%), Positives = 658/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE S G SF+YS SV ++ P E P
Sbjct: 6 PSQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEDS---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH + + KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSA--KPFYAIVHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
++D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + +EPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q K+L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIATWLCEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG +VCGMA RI+ KD +FWFRSHTA EV+WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK L+ +V + S V+ ++ AL G E++NV+ +++ + ++VNAC
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD N+ GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q +E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G++VE L S++ D EG V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K LAYI+++++NPL+GI F K++E + + QRQ L TS C+ Q+ ++D DL I
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|240119381|dbj|BAH79239.1| phytochrome A [Cardamine nipponica]
gi|240119383|dbj|BAH79240.1| phytochrome A [Cardamine nipponica]
gi|240119387|dbj|BAH79242.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 981 bits (2537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/962 (51%), Positives = 658/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE S G SF+YS SV ++ P E P
Sbjct: 6 PSQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEDS---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH + + KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSA--KPFYAIVHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
++D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + +EPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q K+L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG +VCGMA RI+ KD +FWFRSHTA EV+WGGAKH
Sbjct: 479 HTDSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHD 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTK 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP
Sbjct: 599 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK L+ +V + S V+ ++ AL G E++NV+ +++ + ++VNAC
Sbjct: 659 EAIGKHLL-TLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD N+ GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q +E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G++VE L S++ D EG V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K LAYI+++++NPL+GI F K++E + + QRQ L TS C+ Q+ ++D DL I
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|406685523|gb|AFS51202.1| phytochrome P, partial [Lepidothamnus laxifolius]
Length = 670
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/673 (70%), Positives = 548/673 (81%), Gaps = 22/673 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNG----- 133
AYLS++QRGG IQPFGCMLAVEE F+II YSEN LEMLD+ + + D +G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSENALEMLDIMPQYVPNMDLGKSGGGGAV 60
Query: 134 -LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVI 192
IG D RTLFT +L KA+ ++EISL+NPI VHS KPFYAI+HRIDVG+VI
Sbjct: 61 LTIGTDVRTLFTAAGARALEKASMAQEISLMNPIWVHSQYAG--KPFYAIVHRIDVGMVI 118
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
DLEP+K+GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM
Sbjct: 119 DLEPAKTGDAAMSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 178
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV V
Sbjct: 179 VYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 238
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMK 362
IQS++L Q LCLV STLR+PHGCH QYM NMGSIASL MAV+IN D SMK
Sbjct: 239 IQSQDLMQLLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVINGNDEEGGGTSGRSSMK 298
Query: 363 LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDML 422
LWGLVVCHHTSPR +PFPLRY CEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDML
Sbjct: 299 LWGLVVCHHTSPRAVPFPLRYGCEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDML 358
Query: 423 LRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTG 482
LRDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TG
Sbjct: 359 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTG 418
Query: 483 LSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDN 542
LSTDSLA+AGYPGAA LG AVCGMA ARITS DFLFWFRSHTAKE+KWGGAKHHP+ KD+
Sbjct: 419 LSTDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPDDKDD 478
Query: 543 GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQ 602
G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++E+ N +K + +
Sbjct: 479 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIEDSN-TKTMVHARL 537
Query: 603 NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKS 662
N K+QG+DELSSVA EMVRLIETATAPI VDS G +NGWNAKVAELTGLP EAMG+S
Sbjct: 538 NDLKLQGIDELSSVASEMVRLIETATAPILAVDSEGLVNGWNAKVAELTGLPVGEAMGES 597
Query: 663 LIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKN 722
L+ ++V EES VE ++ RA+ GEE+KN+E+KLR F QKQ +Y++VNAC+SRDY +
Sbjct: 598 LVHDLVCEESAECVEKMLNRAVRGEEEKNIEIKLRTFGPQKQKEAIYLVVNACSSRDYTD 657
Query: 723 NVKGVCFVGQDIT 735
N+ GVCFV QD+T
Sbjct: 658 NIVGVCFVAQDVT 670
>gi|371940268|dbj|BAL45571.1| truncate phytochrome A2 protein [Glycine max]
Length = 979
Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/933 (50%), Positives = 648/933 (69%), Gaps = 28/933 (3%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGC 98
DA L A FE+S +S + R + +GV + + TAYL +Q+G +IQPFGC
Sbjct: 27 TVDAKLHATFEESGSSFDYSSSVR-ISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPFGC 85
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LA++E T ++I YSEN EML + S + D G IG D +TLFT PS ++L KA
Sbjct: 86 LLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSASALQKA 144
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
E+ LLNP+L+H + KPFYAI+HR+ ++ID EP K + ++ AGA+QS K
Sbjct: 145 LGFAEVLLLNPVLIHCKTSG--KPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FH+DDHGEV++EI + LE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L STLR+PH
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLVMAV++N + +LWGLVVCH+T+PR++PFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ + E+++ Q+ EKNILRTQ LLCD+++RDAP IV++SP+IMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+ESQ+++IA+WL H D TG STDSL++AG+P A LG
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA R+T+KD +FWFRSHTA E++WGGAKH KD+G +MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVR 622
S PW+ EI+A+HSLQ+++R++F++ E + + NT+ + K++G+ EL +V E+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 623 LIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICR 682
LIETAT PI VD G +NGWN K+AELTGLP EAMGK L+ +V + S V+ ++
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLL-TLVEDSSTDRVKKMLNL 681
Query: 683 ALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMD 742
ALLGEE+KNV+ +++ + + ++VNAC SRD ++NV GVCFV DIT +K +MD
Sbjct: 682 ALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMD 741
Query: 743 KFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF 802
KF R++GDY+AI+Q+ NPLIPPIF +DE C EWN AM K+TGW R EV+ KML E+F
Sbjct: 742 KFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELF 801
Query: 803 GNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEG 859
G CR+K Q+ ++L + +TG TE PFGFF R G++VE L+ S++ D EG
Sbjct: 802 GTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEG 861
Query: 860 KVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLES 919
V G FCF+Q+ P+LQ AL Q L + ++ L+Y++++++NPL GI F K+LE
Sbjct: 862 LVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEG 921
Query: 920 SSISENQRQYLETSDACERQIMTIIDGMDLRCI 952
+++ Q+Q L TS C++Q+ I+D DL I
Sbjct: 922 TALGTEQKQLLRTSAQCQQQLSKILDDSDLDSI 954
>gi|16421|emb|CAA35221.1| unnamed protein product [Arabidopsis thaliana]
Length = 1122
Score = 980 bits (2533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/962 (51%), Positives = 659/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PTQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH R+ KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHC--RTSAKPFYAIIHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
+ID EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH
Sbjct: 479 HMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTK 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGL
Sbjct: 599 VIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK + +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC
Sbjct: 659 EAIGKHFL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q +
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPDKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G++VE L S++ D +G V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDRKGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K LAYI+++++NPL+GI F K++E + + QR+ L+TS C++Q+ I+D DL I
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>gi|190586161|gb|ACE79197.1| phytochrome A-3 [Glycine max]
Length = 1122
Score = 979 bits (2530), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/921 (51%), Positives = 643/921 (69%), Gaps = 28/921 (3%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGC 98
DA + A FE+S +S + R V +GV + + TAYL+ +QRG +IQPFGC
Sbjct: 26 TVDAKIHATFEESGSSFDYSSSVR-VSGTADGVNQPRSDKVTTAYLNHMQRGKIIQPFGC 84
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LA++E T ++I YSEN EML + S + D G IG D +TLFT PS ++L KA
Sbjct: 85 LLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSASALQKA 143
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
E+ LLNP+L+H + KPFYAI+HR+ ++ID EP K + ++ AGA+QS K
Sbjct: 144 LGFAEVLLLNPVLIHCKTSG--KPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 201
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FH+DDHGEV++EI + LE
Sbjct: 202 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 261
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L STLR+PH
Sbjct: 262 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 321
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLVMAV++N + +LWGLVVCH+T+PR++PFPLR
Sbjct: 322 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 381
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ + E+++ Q+ EKNILRTQ LLCD+++RDAP IV++SP+IMDLVK
Sbjct: 382 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 441
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+ESQ+++IA+WL H D TG STDSL++AG+P A LG
Sbjct: 442 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSAPSLGDV 501
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA R+T+KD +FWFRSHTA E++WGGAKH KD+G +MHPRSSFK FL+VVK R
Sbjct: 502 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 561
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVR 622
S PW+ EI+A+HSLQ+++R++F++ E + + NT+ + K++G+ EL +V E+VR
Sbjct: 562 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 621
Query: 623 LIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICR 682
LIETAT PI VD G +NGWN K+AELTGLP EAMGK L+ +V + S V+ ++
Sbjct: 622 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLT-LVEDSSTDRVKKMLNL 680
Query: 683 ALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMD 742
ALLGEE+KNV+ +++ + + ++VNAC SRD ++NV GVCFV DIT +K +MD
Sbjct: 681 ALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMD 740
Query: 743 KFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF 802
KF R++GDY+AI+Q+ NPLIPPIF +DE C EWN AM K+TGW R EV+ KML E+F
Sbjct: 741 KFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELF 800
Query: 803 GNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEG 859
G CR+K Q+ ++L + +TG TE PFGFF R G++VE L+ S++ D EG
Sbjct: 801 GTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEG 860
Query: 860 KVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLES 919
V G FCF+Q+ P+LQ AL Q L + ++ L+Y++++++NPL GI F K+LE
Sbjct: 861 LVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEG 920
Query: 920 SSISENQRQYLETSDACERQI 940
+++ Q+Q L TS C++Q+
Sbjct: 921 TALGTEQKQLLRTSAQCQQQL 941
>gi|371940244|dbj|BAL45559.1| Phytochrome A2 [Glycine soja]
gi|371940246|dbj|BAL45560.1| Phytochrome A2 [Glycine soja]
gi|371940248|dbj|BAL45561.1| Phytochrome A2 [Glycine soja]
gi|371940250|dbj|BAL45562.1| Phytochrome A2 [Glycine soja]
gi|371940252|dbj|BAL45563.1| Phytochrome A2 [Glycine soja]
gi|371940256|dbj|BAL45565.1| Phytochrome A2 [Glycine soja]
gi|371940258|dbj|BAL45566.1| Phytochrome A2 [Glycine soja]
gi|371940262|dbj|BAL45568.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 979 bits (2530), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/921 (51%), Positives = 643/921 (69%), Gaps = 28/921 (3%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGC 98
DA L A FE+S +S + R + +GV + + TAYL +Q+G +IQPFGC
Sbjct: 27 TVDAKLHATFEESGSSFDYSSSVR-ISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPFGC 85
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LA++E T ++I YSEN EML + S + D G IG D +TLFT PS ++L KA
Sbjct: 86 LLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSASALQKA 144
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
E+SLLNP+L+H + KPFYAI+HR+ ++ID EP K + ++ AGA+QS K
Sbjct: 145 LGFAEVSLLNPVLIHCKTSG--KPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FH+DDHGEV++EI + LE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L STLR+PH
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLVMAV++N + +LWGLVVCH+T+PR++PFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ + E+++ Q+ EKNILRTQ LLCD+++RDAP IV++SP+IMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+ESQ+++IA+WL H D TG STDSL++AG+P A LG
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA R+T+KD +FWFRSHTA E++WGGAKH KD+G +MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVR 622
S PW+ EI+A+HSLQ+++R++F++ E + + NT+ + K++G+ EL +V E+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 623 LIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICR 682
LIETAT PI VD G +NGWN K+AELTGLP EAMGK L+ +V + S V+ ++
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLT-LVEDSSTDRVKKMLNL 681
Query: 683 ALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMD 742
ALLGEE+KNV+ +++ + + ++VNAC SRD ++NV GVCFV DIT +K +MD
Sbjct: 682 ALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMD 741
Query: 743 KFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF 802
KF R++GDY+AI+Q+ NPLIPPIF +DE C EWN AM K+TGW R EV+ KML E+F
Sbjct: 742 KFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELF 801
Query: 803 GNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEG 859
G CR+K Q+ ++L + +TG TE PFGFF R G++VE L+ S++ D EG
Sbjct: 802 GTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEG 861
Query: 860 KVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLES 919
V G FCF+Q+ P+LQ AL Q L + ++ L+Y++++++NPL GI F K+LE
Sbjct: 862 LVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEG 921
Query: 920 SSISENQRQYLETSDACERQI 940
+++ Q+Q L TS C++Q+
Sbjct: 922 TALGTEQKQLLRTSAQCQQQL 942
>gi|130185|sp|P06592.1|PHYA_CUCPE RecName: Full=Phytochrome A
gi|167501|gb|AAA33115.1| phytochrome [Cucurbita pepo]
gi|225435|prf||1303260A phytochrome
Length = 1124
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/943 (51%), Positives = 644/943 (68%), Gaps = 32/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
II + DA + A+FE+S G SF+YS SV + ++Q TAYL IQ+G
Sbjct: 22 IIAQTSVDANVQADFEES---GNSFDYSSSVRVTSDVSGDQQPRSDKVTTAYLHHIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA+++ TF++I YSEN EML + S + D+ + G IG D RT+FT PS
Sbjct: 79 LIQPFGCLLALDDKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLG-IGTDVRTIFTAPS 137
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
++L KA E++LLNPILVH + KPFYAI+HR+ ++ID EP K + ++ A
Sbjct: 138 ASALLKALGFGEVTLLNPILVHCKTSG--KPFYAIVHRVTGSLIIDFEPVKPYEGPVTAA 195
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEV+SE
Sbjct: 196 GALQSYKLAAKAITRLQSLPSGSMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISE 255
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
+ + L+PYLG+H+PA DIPQAARFLF +N+VRMI DC A + V+Q ++L+ L L S
Sbjct: 256 VAKPGLQPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGS 315
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPR 375
TLR+PH CHLQYM NM SIASLVMAV++N D +LWGLVVCH++SPR
Sbjct: 316 TLRAPHSCHLQYMENMNSIASLVMAVVVNEGDEENEGPALQQQKRKRLWGLVVCHNSSPR 375
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+RDAP IV++SP
Sbjct: 376 FVPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSP 435
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVK DGAAL Y + W +G+TP + QL DIA WL H D TGLSTDSL +AGYPG
Sbjct: 436 NIMDLVKSDGAALLYKKKIWRLGLTPNDFQLLDIASWLSEYHMDSTGLSTDSLYDAGYPG 495
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RIT+ D +FWFRSHTA E++WGGAKH KD+ KMHPRSSFKAF
Sbjct: 496 AIALGDEVCGMAAVRITNNDMIFWFRSHTASEIRWGGAKHEHGQKDDARKMHPRSSFKAF 555
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F++ + ++ T K++G EL S
Sbjct: 556 LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDATEINRKSIQTTLGDLKIEGRQELES 615
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PI VD G INGWN K+AELTGLP +A+GK L+ +V + S
Sbjct: 616 VTSEMVRLIETATVPILAVDLDGLINGWNTKIAELTGLPVDKAIGKHLL-TLVEDSSVEV 674
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V ++ AL G+E++NV+ +++ + + ++VNAC SRD + NV GV FV QDIT
Sbjct: 675 VRKMLFLALQGQEEQNVQFEIKTHGSHIEVGSISLVVNACASRDLRENVVGVFFVAQDIT 734
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K++MDKF RL+GDY+AI+Q+ NPLIPPIF SDE CSEWN AM K+TGW R EVI K
Sbjct: 735 GQKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDEFGWCSEWNPAMAKLTGWSREEVIDK 794
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG + CR+K Q+ I+L + GQ E FGF R G +VE L +
Sbjct: 795 MLLGEVFGVHKSCCRLKNQEAFVNLGIVLNNAMCGQDPEKASFGFLARNGMYVECLLCVN 854
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+ D +G V G FCF+Q+ +LQ AL Q L + +++ L YI+++++NPL+GI F
Sbjct: 855 KILDKDGAVTGFFCFLQLPSHELQQALNIQRLCEQTALKRLRALGYIKRQIQNPLSGIIF 914
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+LLE + + Q++ L TS C++QI ++D D+ I +G
Sbjct: 915 SRRLLERTELGVEQKELLRTSGLCQKQISKVLDESDIDKIIDG 957
>gi|38037208|gb|AAR08426.1| phytochrome A [Orobanche minor]
Length = 1123
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/943 (51%), Positives = 650/943 (68%), Gaps = 32/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV--ISPPEGVPEEQ----ITAYLSKIQRGG 91
II + DA L A+FE+S G SF+YS SV + P G+ E + TAYL +IQ+G
Sbjct: 22 IIAQTSIDAKLDADFEES---GSSFDYSTSVRVTNYPAGLSEPRSDKVTTAYLHQIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQ FGC+LA++E TFR+I YSEN EML + S + D L G IG D RT+FT PS
Sbjct: 79 LIQQFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPLLG-IGSDIRTIFTAPS 137
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
A+L KA E+SLLNPILVH + KPFYAI+HR+ ++ID EP K + ++ A
Sbjct: 138 AAALQKALGFGEVSLLNPILVHCKTSG--KPFYAIIHRVTGSLIIDFEPVKPHEVPMTAA 195
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AI+ LQALPGG I LCDT+V+ V +LTGYDRVM+Y FH+DDHGEV +E
Sbjct: 196 GALQSYKLAAKAIACLQALPGGSIERLCDTMVQQVFELTGYDRVMIYKFHEDDHGEVFTE 255
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + LEPY+G+H+PA DIPQAARFLF +N+VRMICDC A V V+Q L L L S
Sbjct: 256 ITKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQDDNLPFDLTLCGS 315
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPR 375
TLR+PHGCH QYM NM SIASLVM+V++N D +LWGLVVCH+T PR
Sbjct: 316 TLRAPHGCHSQYMENMNSIASLVMSVVVNEGDEDGPDSSSGPYKRKRLWGLVVCHNTCPR 375
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
+IPFPLRYACEFLVQ FS+ + EL++ Q+ EKNILRTQ LLCD+LLRD P IV+QSP
Sbjct: 376 FIPFPLRYACEFLVQVFSIHVNKELELENQMLEKNILRTQTLLCDLLLRDVPLGIVSQSP 435
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
++MDLVKCDGA L + + +G+TPT+ Q++DI WL H D TGLSTDSL +AG+PG
Sbjct: 436 NVMDLVKCDGAILLHKRTKYRLGLTPTDFQIRDIVSWLDEYHQDSTGLSTDSLYDAGFPG 495
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG A+CGMA +IT +D+LFWFRSHTA E++WGGAKH E KD+G KMHPRSSF+AF
Sbjct: 496 ALALGNALCGMAAVKITDEDWLFWFRSHTAAEIRWGGAKHELEAKDDGRKMHPRSSFRAF 555
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++ IHSLQ+++R++++E EE++ + + + N ++ GV E+ +
Sbjct: 556 LEVVKTRSLPWKDYEMDGIHSLQLILRNAYKESEEKDLESREIHARLNELQIDGVKEIEA 615
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PIF V G +NGWN K+++LTGL EA+G + +V + S
Sbjct: 616 VTSEMVRLIETATVPIFSVGVDGLVNGWNTKISDLTGLSVVEAIGMHFL-ALVEDSSADT 674
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V ++ AL G+E+ +V+ +++ + + + ++VNAC S+D K NV GVCF+ QDIT
Sbjct: 675 VSKMLGLALQGKEEHDVQFEIKTHGQRSESGPISLIVNACASKDVKENVVGVCFIAQDIT 734
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K +MDKF R++GDY +IIQ+ NPLIPPIF +DE CSEWNAAM K++GW R VI K
Sbjct: 735 TQKSMMDKFTRIEGDYRSIIQNPNPLIPPIFGTDEFGWCSEWNAAMIKLSGWGREAVIDK 794
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG CR+K Q+ ++L +TGQ + FGFF+R G++V L S
Sbjct: 795 MLLGEVFGLNKACCRLKNQEAYVNLGVVLNNTVTGQESGKVSFGFFSRSGKYVACLLCVS 854
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
++ D+EG V G FCF+Q+ P+LQ AL Q + + +++ LAYIR+E+++PL+GI F
Sbjct: 855 KKVDSEGSVTGLFCFLQLASPELQQALHIQRISEQTASKRLRVLAYIRREIRSPLSGIIF 914
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
KL+E + +++ Q+ + TS C+ Q+ I++ DL I EG
Sbjct: 915 SRKLMEGTDLNDEQKNIVRTSLHCQSQMNKILEDTDLDHIIEG 957
>gi|371940254|dbj|BAL45564.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/921 (51%), Positives = 642/921 (69%), Gaps = 28/921 (3%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGC 98
DA L A FE+S +S + R + +GV + + TAYL +Q+G +IQPFGC
Sbjct: 27 TVDAKLHATFEESGSSFDYSSSVR-ISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPFGC 85
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LA++E T ++I YSEN EML + S + D G IG D +TLFT PS ++L KA
Sbjct: 86 LLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSASALQKA 144
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
E+SLLNP+L+H + KPFYAI+HR+ ++ID EP K + ++ AGA+QS K
Sbjct: 145 LGFAEVSLLNPVLIHCKTSG--KPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FH+DDHGEV++EI + LE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L STLR+PH
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLVMAV++N + +LWGLVVCH+T+PR++PFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ + E+++ Q+ EKNILRTQ LLCD+++RDAP IV++SP+IMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+ESQ+++IA+WL H D TG STDSL++AG+P A LG
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA R+T+KD +FWFRSHTA E++WGGAKH KD+G +MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVR 622
S PW+ EI+A+HSLQ+++R++F++ E + + NT+ + K++G+ EL +V E+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 623 LIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICR 682
LIETAT PI VD G +NGWN K+AELTGLP EAMGK L+ +V + S V+ ++
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLT-LVEDSSTDRVKKMLNL 681
Query: 683 ALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMD 742
ALLGEE+KNV+ +++ + + ++VNAC SRD ++NV GVCFV DIT +K +MD
Sbjct: 682 ALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMD 741
Query: 743 KFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF 802
KF R++GDY+AI+Q+ NPLIPPIF +DE C EWN AM K+TGW R EV+ KML E+F
Sbjct: 742 KFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELF 801
Query: 803 GNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEG 859
G CR+K Q+ ++L + +TG TE PFGFF R G++VE L+ S++ D EG
Sbjct: 802 GTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEG 861
Query: 860 KVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLES 919
V G FCF+Q+ P+LQ AL Q L + ++ L Y++++++NPL GI F K+LE
Sbjct: 862 LVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALNYMKRQIRNPLCGIIFSRKMLEG 921
Query: 920 SSISENQRQYLETSDACERQI 940
+++ Q+Q L TS C++Q+
Sbjct: 922 TALGTEQKQLLRTSAQCQQQL 942
>gi|406685615|gb|AFS51248.1| phytochrome P, partial [Prumnopitys ladei]
Length = 662
Score = 977 bits (2526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/665 (70%), Positives = 545/665 (81%), Gaps = 22/665 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGCMLAVEE F+II YS+N LEMLDL +S + +L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEEMGFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 134 -LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVI 192
G D RTLFTP S +L KAA +REISL+NPI VHS KPFYAI+HRIDVGIVI
Sbjct: 61 LTTGTDVRTLFTPASARALEKAAMAREISLMNPIWVHSQYTG--KPFYAIVHRIDVGIVI 118
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
DLEP + GD +S AGAVQSQKL+V AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM
Sbjct: 119 DLEPVRMGDATMSAAGAVQSQKLSVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVM 178
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
+Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV V
Sbjct: 179 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 238
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMK 362
+QS+EL+QP+CLV STLR+PHGCH QYM NMGSIASLVMAVIIN D SMK
Sbjct: 239 VQSEELRQPICLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGDDEEGGGTSGRVSMK 298
Query: 363 LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDML 422
LWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDML
Sbjct: 299 LWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDML 358
Query: 423 LRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTG 482
LRDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TG
Sbjct: 359 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTG 418
Query: 483 LSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDN 542
LSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+
Sbjct: 419 LSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDD 478
Query: 543 GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQ 602
G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N +K + +
Sbjct: 479 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN-TKTMVHARL 537
Query: 603 NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKS 662
N K+QG+DEL+SVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKS
Sbjct: 538 NDIKLQGIDELTSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKS 597
Query: 663 LIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKN 722
L+ ++V EES +VE ++ RAL G+E+KNVE+KLR F QKQ +Y++ NAC+SRDY +
Sbjct: 598 LVHDLVFEESAESVEKMLYRALRGDEEKNVEVKLRTFGPQKQKEAIYLVANACSSRDYTD 657
Query: 723 NVKGV 727
N+ GV
Sbjct: 658 NIVGV 662
>gi|371941942|gb|ACE79196.2| phytochrome A-2 [Glycine max]
Length = 1130
Score = 977 bits (2526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/945 (50%), Positives = 653/945 (69%), Gaps = 38/945 (4%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGC 98
DA + A FE+S +S + R V +GV + + TAYL+++QRG +IQPFGC
Sbjct: 26 TVDAKIHATFEESGSSFDYSSSVR-VSGTADGVNQPRSDKVTTAYLNRMQRGKMIQPFGC 84
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LA++E T ++I YSEN EML + S + D G IG D +TLFT PS + L KA
Sbjct: 85 LLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSVSGLQKA 143
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
++SLLNPILVH + KPFYAI+HR+ +++D EP K + ++ AGA+QS K
Sbjct: 144 LGCADVSLLNPILVHCKTSG--KPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYK 201
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G++ LCDT+V++V +LTGYDRVM Y FH+DDHGEV++EI + LE
Sbjct: 202 LAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 261
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF++N+VRMI DCHA V V+Q ++L+ L L STLR+PH
Sbjct: 262 PYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHS 321
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLV+AV++N + +LWGLVVCH+T+PR++PFPLR
Sbjct: 322 CHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLR 381
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ ++ E+++ Q+ EKNILRTQ LLC ML+RDAP IV++SP+IMDLVK
Sbjct: 382 YACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVK 440
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+E Q+++IA WL H D TG STDSL +AG+P A LG
Sbjct: 441 CDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDV 500
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA+ R+T+KD +FWFRSHTA E++WGGAKH KD+ +MHPRSSFKAFLEVVK R
Sbjct: 501 VCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKAR 560
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG-NTQQNGSKMQGVD--------EL 613
S PW+ E++AIHSLQI++R++F+E E D + NT+ + K++G++ EL
Sbjct: 561 SLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLSDLKIEGINDLKIERMQEL 620
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V E+VRLI+TAT PI VD G +NGWN K+AELTGLP EA GK L+ +V + S
Sbjct: 621 EAVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLL-TLVEDSST 679
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ ALLGEE+KNV+ +++ + + ++VNAC SRD ++NV GVCFV D
Sbjct: 680 DRVKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHD 739
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
IT +K +MDKFIR++GDY+AI+Q+ NPLIPPIF +DE C EWN AM K+TGW R EV+
Sbjct: 740 ITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEVM 799
Query: 794 GKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML EIFG CR+K Q+ ++L + +TG TE PFGFF R G++VE L+
Sbjct: 800 DKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLLS 859
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
S++ D EG V G FCF+Q+ P+LQ AL Q L + ++ L+Y++++++NPL GI
Sbjct: 860 VSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCGI 919
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F K+LE + + Q+Q L TS C++Q+ I+D DL I +G
Sbjct: 920 VFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDG 964
>gi|359806634|ref|NP_001241532.1| phytochrome type A-like [Glycine max]
gi|190586157|gb|ACE79195.1| phytochrome A-1 [Glycine max]
gi|207367150|dbj|BAG72095.1| phytochrome A [Glycine max]
gi|371940264|dbj|BAL45569.1| Phytochrome A2 [Glycine max]
Length = 1123
Score = 976 bits (2523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/921 (51%), Positives = 642/921 (69%), Gaps = 28/921 (3%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGC 98
DA L A FE+S +S + R + +GV + + TAYL +Q+G +IQPFGC
Sbjct: 27 TVDAKLHATFEESGSSFDYSSSVR-ISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPFGC 85
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LA++E T ++I YSEN EML + S + D G IG D +TLFT PS ++L KA
Sbjct: 86 LLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSASALQKA 144
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
E+ LLNP+L+H + KPFYAI+HR+ ++ID EP K + ++ AGA+QS K
Sbjct: 145 LGFAEVLLLNPVLIHCKTSG--KPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FH+DDHGEV++EI + LE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L STLR+PH
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLVMAV++N + +LWGLVVCH+T+PR++PFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ + E+++ Q+ EKNILRTQ LLCD+++RDAP IV++SP+IMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+ESQ+++IA+WL H D TG STDSL++AG+P A LG
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA R+T+KD +FWFRSHTA E++WGGAKH KD+G +MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVR 622
S PW+ EI+A+HSLQ+++R++F++ E + + NT+ + K++G+ EL +V E+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 623 LIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICR 682
LIETAT PI VD G +NGWN K+AELTGLP EAMGK L+ +V + S V+ ++
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLT-LVEDSSTDRVKKMLNL 681
Query: 683 ALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMD 742
ALLGEE+KNV+ +++ + + ++VNAC SRD ++NV GVCFV DIT +K +MD
Sbjct: 682 ALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMD 741
Query: 743 KFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF 802
KF R++GDY+AI+Q+ NPLIPPIF +DE C EWN AM K+TGW R EV+ KML E+F
Sbjct: 742 KFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELF 801
Query: 803 GNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEG 859
G CR+K Q+ ++L + +TG TE PFGFF R G++VE L+ S++ D EG
Sbjct: 802 GTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEG 861
Query: 860 KVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLES 919
V G FCF+Q+ P+LQ AL Q L + ++ L+Y++++++NPL GI F K+LE
Sbjct: 862 LVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEG 921
Query: 920 SSISENQRQYLETSDACERQI 940
+++ Q+Q L TS C++Q+
Sbjct: 922 TALGTEQKQLLRTSAQCQQQL 942
>gi|207367148|dbj|BAG72094.1| phytochrome A [Glycine max]
gi|371940222|dbj|BAL45548.1| Phytochrome A1 [Glycine max]
gi|371940224|dbj|BAL45549.1| Phytochrome A1 [Glycine soja]
gi|371940226|dbj|BAL45550.1| Phytochrome A1 [Glycine soja]
gi|371940228|dbj|BAL45551.1| Phytochrome A1 [Glycine soja]
gi|371940230|dbj|BAL45552.1| Phytochrome A1 [Glycine soja]
gi|371940232|dbj|BAL45553.1| Phytochrome A1 [Glycine soja]
gi|371940234|dbj|BAL45554.1| Phytochrome A1 [Glycine soja]
gi|371940236|dbj|BAL45555.1| Phytochrome A1 [Glycine soja]
gi|371940238|dbj|BAL45556.1| Phytochrome A1 [Glycine max]
gi|371940240|dbj|BAL45557.1| Phytochrome A1 [Glycine max]
gi|371940242|dbj|BAL45558.1| Phytochrome A1 [Glycine max]
Length = 1130
Score = 976 bits (2523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/945 (50%), Positives = 652/945 (68%), Gaps = 38/945 (4%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGC 98
DA + A FE+S +S + R V +GV + + TAYL+ +QRG +IQPFGC
Sbjct: 26 TVDAKIHATFEESGSSFDYSSSVR-VSGTADGVNQPRSDKVTTAYLNHMQRGKMIQPFGC 84
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LA++E T ++I YSEN EML + S + D G IG D +TLFT PS + L KA
Sbjct: 85 LLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSVSGLQKA 143
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
++SLLNPILVH + KPFYAI+HR+ +++D EP K + ++ AGA+QS K
Sbjct: 144 LGCADVSLLNPILVHCKTSG--KPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYK 201
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G++ LCDT+V++V +LTGYDRVM Y FH+DDHGEV++EI + LE
Sbjct: 202 LAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 261
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF++N+VRMI DCHA V V+Q ++L+ L L STLR+PH
Sbjct: 262 PYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHS 321
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLV+AV++N + +LWGLVVCH+T+PR++PFPLR
Sbjct: 322 CHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLR 381
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ ++ E+++ Q+ EKNILRTQ LLC ML+RDAP IV++SP+IMDLVK
Sbjct: 382 YACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVK 440
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+E Q+++IA WL H D TG STDSL +AG+P A LG
Sbjct: 441 CDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDV 500
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA+ R+T+KD +FWFRSHTA E++WGGAKH KD+ +MHPRSSFKAFLEVVK R
Sbjct: 501 VCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKAR 560
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG-NTQQNGSKMQGVD--------EL 613
S PW+ E++AIHSLQI++R++F+E E D + NT+ + K++G++ EL
Sbjct: 561 SLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLSDLKIEGINDLKIERMQEL 620
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V E+VRLI+TAT PI VD G +NGWN K+AELTGLP EA GK L+ +V + S
Sbjct: 621 EAVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLL-TLVEDSST 679
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ ALLGEE+KNV+ +++ + + ++VNAC SRD ++NV GVCFV D
Sbjct: 680 DRVKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHD 739
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
IT +K +MDKFIR++GDY+AI+Q+ NPLIPPIF +DE C EWN AM K+TGW R EV+
Sbjct: 740 ITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEVM 799
Query: 794 GKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML EIFG CR+K Q+ ++L + +TG TE PFGFF R G++VE L+
Sbjct: 800 DKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLLS 859
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
S++ D EG V G FCF+Q+ P+LQ AL Q L + ++ L+Y++++++NPL GI
Sbjct: 860 VSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCGI 919
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F K+LE + + Q+Q L TS C++Q+ I+D DL I +G
Sbjct: 920 VFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDG 964
>gi|33333476|gb|AAQ11871.1| phytochrome A1 [Stellaria longipes]
Length = 1122
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/933 (51%), Positives = 636/933 (68%), Gaps = 42/933 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGV-----PEEQITAYLSKIQRGGL 92
II DA AEFE+S F+YS SV GV ++ ++YL +IQ+G
Sbjct: 22 IIAQTIQDAKFHAEFEES---SNEFDYSSSVRGSTSGVNQLPKSDKVTSSYLLQIQKGKF 78
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGC+LA+++ TFR+I +SEN EML + S + D + G IG D RT+FT PS
Sbjct: 79 IQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDLPVIG-IGTDIRTIFTGPSA 137
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
++L KA ++SLLNPILVH + KPFYAI+HR+ +VID EP K + ++ AG
Sbjct: 138 SALQKALGFTDVSLLNPILVHCKNSG--KPFYAIVHRVTRSLVIDFEPVKPYEVPMTAAG 195
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AI+RLQ+LP G++ L DT+V++V +LTGYDRVM Y FHDDDHGEVVSE+
Sbjct: 196 ALQSYKLAAKAITRLQSLPSGNMVRLVDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEV 255
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ +L+ YLG+H+PA DIPQAARFLF +N+VR+ICDC A V V+Q ++L L L ST
Sbjct: 256 TKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRVVQDEKLSVDLTLCGST 315
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPR 375
LR+PHGCH QYM NM SI SLVMAV++N +D +LWGLVVCHHTSPR
Sbjct: 316 LRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHKRKRLWGLVVCHHTSPR 375
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q EK ILRTQ LLCDML+RDAP IVT SP
Sbjct: 376 FVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLLCDMLIRDAPLGIVTHSP 435
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVKCDGAAL Y + W +G TPT+ QL++I WL +H D TGLSTDSL +AGYP
Sbjct: 436 NIMDLVKCDGAALLYNNKVWRLGSTPTDYQLQEIGGWLSRDHMDSTGLSTDSLYDAGYPA 495
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG +VCGMA IT D LFWF SHTA E+KWGGAKH KD+G KMHPRSSFKAF
Sbjct: 496 ALELGDSVCGMAAVSITVNDMLFWFTSHTAAEIKWGGAKHEAGEKDDGSKMHPRSSFKAF 555
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +++ + ++ G+ EL +
Sbjct: 556 LEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDGEAADLNTSVIHSKISDLQISGLKELEA 615
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PIF VDS G +NGWN K+ ELTG+P EA+GK I +V + S
Sbjct: 616 VTSEMVRLIETATVPIFAVDSDGLVNGWNTKIYELTGIPVEEAVGKH-IAALVEDSSIDN 674
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSV-----VYILVNACTSRDYKNNVKGVCFV 730
V+ ++ AL GEE KNV+ FE+++ HS+ + ++VNAC S+D NV GVC +
Sbjct: 675 VKQMLQSALQGEEKKNVQ-----FEVKRHHSIPDSGPISLIVNACASKDVNGNVVGVCLI 729
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QDIT +K +MDKF+R++GDY+AIIQS NPLIPPIF +DE CSEWN AM K+TGW R
Sbjct: 730 AQDITGQKTVMDKFLRIEGDYKAIIQSPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWTRE 789
Query: 791 EVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+FG + CR+K Q+ +LL ++GQ E GFF R G+++E
Sbjct: 790 EVIDKMLLGEVFGMHKSCCRLKNQEAFVNLGVLLNGAMSGQNIEKLSIGFFTRSGKYIEC 849
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L +++ + EG V G FCF+Q+ DLQ AL Q L + + LAY+++++KNPL
Sbjct: 850 LLCVNKKLNGEGDVTGVFCFLQLASHDLQHALHIQRLAEQAATKRANVLAYMKRQIKNPL 909
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQI 940
GI F K+L+ +++ E QR L+TS C+ Q+
Sbjct: 910 AGIIFSGKILDGTNVDEKQRLVLQTSARCQGQL 942
>gi|406685611|gb|AFS51246.1| phytochrome P, partial [Prumnopitys andina]
Length = 661
Score = 975 bits (2521), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/664 (70%), Positives = 545/664 (82%), Gaps = 22/664 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC LAVEE F+II YS+N LEMLDL +S + +L
Sbjct: 1 AYLSRMQRGGTIQPFGCTLAVEETGFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 134 -LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVI 192
IG D RTLFTP S +L KAA REISL+NPI VHS KPFYAI+HRIDVGIVI
Sbjct: 61 LAIGTDVRTLFTPASARALEKAAMGREISLMNPIWVHSQYTG--KPFYAIVHRIDVGIVI 118
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
DLEP ++GD A+S AGAVQSQKLAV AISRLQ+LP GD+GLLCDTVVEDV++LTGYDRVM
Sbjct: 119 DLEPVRTGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDVGLLCDTVVEDVRELTGYDRVM 178
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNR+RMICDC A PV V
Sbjct: 179 VYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRMRMICDCSAAPVKV 238
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMK 362
+QS+EL+QPLCLV STLR+PHGCH QYM NMGS+ASLVMAVIIN D SMK
Sbjct: 239 VQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDEEGGGTSGRISMK 298
Query: 363 LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDML 422
LWGLVVCHHTSPR +PF LRYACEFL+QAF LQL MELQ+A Q+ EK+ILRTQ LLCDML
Sbjct: 299 LWGLVVCHHTSPRAVPFSLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDML 358
Query: 423 LRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTG 482
LRDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TG
Sbjct: 359 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTG 418
Query: 483 LSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDN 542
LSTDSLA+AG+PGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+
Sbjct: 419 LSTDSLADAGHPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDD 478
Query: 543 GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQ 602
G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N +K + +
Sbjct: 479 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN-TKTMVHARL 537
Query: 603 NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKS 662
N K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKS
Sbjct: 538 NDMKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKS 597
Query: 663 LIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKN 722
L+ ++V EES +VE ++ RAL G+E+KNVE+KLR F QKQ +Y++VNAC+SRDY +
Sbjct: 598 LVQDLVFEESHESVEKMLYRALRGDEEKNVEVKLRTFGPQKQKEAIYLVVNACSSRDYTD 657
Query: 723 NVKG 726
N+ G
Sbjct: 658 NIVG 661
>gi|371940260|dbj|BAL45567.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/921 (51%), Positives = 642/921 (69%), Gaps = 28/921 (3%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGC 98
DA L A FE+S +S + R + +GV + + TAYL +Q+G +IQPFGC
Sbjct: 27 TVDAKLHATFEESGSSFDYSSSVR-ISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPFGC 85
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LA++E T ++I YSEN EML + S + D G IG D +TLFT PS ++L KA
Sbjct: 86 LLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSASALQKA 144
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
E+SLLNP+L+H + KPFYAI+HR+ ++ID EP K + ++ AGA+QS K
Sbjct: 145 LGFAEVSLLNPVLIHCKTSG--KPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FH+DDHGEV++EI + LE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
YLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L STLR+PH
Sbjct: 263 LYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLVMAV++N + +LWGLVVCH+T+PR++PFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ + E+++ Q+ EKNILRTQ LLCD+++RDAP IV++SP+IMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+ESQ+++IA+WL H D TG STDSL++AG+P A LG
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA R+T+KD +FWFRSHTA E++WGGAKH KD+G +MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVR 622
S PW+ EI+A+HSLQ+++R++F++ E + + NT+ + K++G+ EL +V E+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 623 LIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICR 682
LIETAT PI VD G +NGWN K+AELTGLP EAMGK L+ +V + S V+ ++
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLL-TLVEDSSTDRVKKMLNL 681
Query: 683 ALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMD 742
ALLGEE+KNV+ +++ + + ++VNAC SRD ++NV GVCFV DIT +K +MD
Sbjct: 682 ALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMD 741
Query: 743 KFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF 802
KF R++GDY+AI+Q+ NPLIPPIF +DE C EWN AM K+TGW R EV+ KML E+F
Sbjct: 742 KFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELF 801
Query: 803 GNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEG 859
G CR+K Q+ ++L + +TG TE PFGFF R G++VE L+ S++ D EG
Sbjct: 802 GTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEG 861
Query: 860 KVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLES 919
V G FCF+Q+ P+LQ AL Q L + ++ L+Y++++++NPL GI F K+LE
Sbjct: 862 LVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEG 921
Query: 920 SSISENQRQYLETSDACERQI 940
+++ Q+Q L TS C++Q+
Sbjct: 922 TALGTEQKQLLRTSAQCQQQL 942
>gi|406685489|gb|AFS51185.1| phytochrome P, partial [Acmopyle sahniana]
Length = 659
Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/662 (71%), Positives = 543/662 (82%), Gaps = 20/662 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------L 134
AYLS++QRGG IQPFGCMLAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGSVLT 60
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D RTLFTP +L KAA + +ISL+NPI VHS KPF AI+HRIDVGIVIDL
Sbjct: 61 IGTDVRTLFTPSGARALEKAAMAPDISLMNPIWVHSQYTG--KPFNAIVHRIDVGIVIDL 118
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP ++GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y
Sbjct: 119 EPLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVY 178
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ
Sbjct: 179 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 238
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKLW 364
S+EL+QP CLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKLW
Sbjct: 239 SEELRQPFCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKLW 298
Query: 365 GLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLR 424
GLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLR
Sbjct: 299 GLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 358
Query: 425 DAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLS 484
DAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGLS
Sbjct: 359 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLS 418
Query: 485 TDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGG 544
TDSLA+AGYPGAALLG AVCGMA ARITSKD+LFW+RSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 TDSLADAGYPGAALLGDAVCGMAAARITSKDYLFWYRSHTAKEMKWGGAKHHPDDKDDGR 478
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNG 604
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N
Sbjct: 479 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDSDTKTMVHARLND 537
Query: 605 SKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLI 664
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL+
Sbjct: 538 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 597
Query: 665 DEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNV 724
++V EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY +N+
Sbjct: 598 HDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDNI 657
Query: 725 KG 726
G
Sbjct: 658 VG 659
>gi|371940220|dbj|BAL45547.1| Phytochrome A1 [Glycine max]
Length = 1130
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/945 (50%), Positives = 651/945 (68%), Gaps = 38/945 (4%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGC 98
DA + A FE+S +S + R V +GV + + TAYL+ +QRG +IQPFGC
Sbjct: 26 TVDAKIHATFEESGSSFDYSSSVR-VSGTADGVNQPRSDKVTTAYLNHMQRGKMIQPFGC 84
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LA++E T ++I YSEN EML + S + D G IG D +TLFT PS + L KA
Sbjct: 85 LLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSVSGLQKA 143
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
++SLLNPILVH + KPFYAI+HR+ +++D EP K + ++ AGA+QS K
Sbjct: 144 LGCADVSLLNPILVHCKTSG--KPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYK 201
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G++ LCDT+V++V +LTGYDRVM Y FH+DDHGEV++EI + LE
Sbjct: 202 LAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 261
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF++N+VRMI DCHA V V+Q ++L+ L L STLR+PH
Sbjct: 262 PYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHS 321
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLV+AV++N + +LWGLVVCH+T+PR++PFPLR
Sbjct: 322 CHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLR 381
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ ++ E+++ Q+ EKNILRTQ LLC ML+RDAP IV++SP+IMDLVK
Sbjct: 382 YACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVK 440
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+E Q+++IA WL H D TG STDSL +AG+P A LG
Sbjct: 441 CDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDV 500
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA+ R+T+K +FWFRSHTA E++WGGAKH KD+ +MHPRSSFKAFLEVVK R
Sbjct: 501 VCGMASVRVTAKGMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKAR 560
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG-NTQQNGSKMQGVD--------EL 613
S PW+ E++AIHSLQI++R++F+E E D + NT+ + K++G++ EL
Sbjct: 561 SLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLSDLKIEGINDLKIERMQEL 620
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V E+VRLI+TAT PI VD G +NGWN K+AELTGLP EA GK L+ +V + S
Sbjct: 621 EAVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLL-TLVEDSST 679
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ ALLGEE+KNV+ +++ + + ++VNAC SRD ++NV GVCFV D
Sbjct: 680 DRVKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHD 739
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
IT +K +MDKFIR++GDY+AI+Q+ NPLIPPIF +DE C EWN AM K+TGW R EV+
Sbjct: 740 ITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEVM 799
Query: 794 GKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML EIFG CR+K Q+ ++L + +TG TE PFGFF R G++VE L+
Sbjct: 800 DKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLLS 859
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
S++ D EG V G FCF+Q+ P+LQ AL Q L + ++ L+Y++++++NPL GI
Sbjct: 860 VSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCGI 919
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F K+LE + + Q+Q L TS C++Q+ I+D DL I +G
Sbjct: 920 VFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDG 964
>gi|406685541|gb|AFS51211.1| phytochrome P, partial [Phyllocladus hypophyllus]
Length = 661
Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/664 (70%), Positives = 546/664 (82%), Gaps = 22/664 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGCMLAVEE F+II YS+N LEMLDL +S + +L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 134 -LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVI 192
IG D R+LFT S +L KA+ ++EISL+NPI VHS KPFYAI+HRIDVG+VI
Sbjct: 61 LTIGTDVRSLFTVASARALQKASMAQEISLMNPIWVHSQYTG--KPFYAIVHRIDVGMVI 118
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
DLEP ++GD ALS AGAVQSQ+LAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM
Sbjct: 119 DLEPVRTGDAALSAAGAVQSQRLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVM 178
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
+Y FH+D+HGEVV+EIRR+DLEPY G+H+PA DIPQA+RFLF QNRVRMICDC A PV V
Sbjct: 179 VYKFHEDEHGEVVAEIRRADLEPYQGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 238
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMK 362
IQS+EL+QPLCLV STLR+PHGCH QYM NMGS+ASLVMAV+IN D SMK
Sbjct: 239 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVINGNDEEGGGTSGRSSMK 298
Query: 363 LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDML 422
LWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDML
Sbjct: 299 LWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDML 358
Query: 423 LRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTG 482
LRDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TG
Sbjct: 359 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTG 418
Query: 483 LSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDN 542
LSTDSLA+AGYPGAA LG AVCGMA ARITS DFLFWFRSHTAKE+KWGGAKHHP+ KD+
Sbjct: 419 LSTDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPDDKDD 478
Query: 543 GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQ 602
G +MHPRSSFKAFLEVVK RSFPWE E++AIHSLQ+++R SFQ++E+ N +K +T+
Sbjct: 479 GRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDIEDSN-TKTMVHTRL 537
Query: 603 NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKS 662
N K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGL EAMGKS
Sbjct: 538 NDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLAVGEAMGKS 597
Query: 663 LIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKN 722
L+ ++V EES +V+ ++ RAL GEE++NVE+KLR F QKQ +Y++VNAC+SRDY +
Sbjct: 598 LVHDLVFEESAESVDKILYRALRGEEEQNVEIKLRTFGPQKQKEAIYLVVNACSSRDYTD 657
Query: 723 NVKG 726
N+ G
Sbjct: 658 NIVG 661
>gi|240119425|dbj|BAH79261.1| phytochrome C [Cardamine resedifolia]
Length = 1112
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/933 (51%), Positives = 647/933 (69%), Gaps = 34/933 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS SV ++ P +P ++ YL IQRG LIQPFGC++
Sbjct: 27 DATLHRNFEES---ERLFDYSASVNLNMPSSSFDIPSSAVSTYLQNIQRGMLIQPFGCLI 83
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAAA 156
V+E ++I +SEN EML L + E E IG D ++LF P ++L KA
Sbjct: 84 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALS-IGTDVKSLFQSPGSSALQKAID 142
Query: 157 SREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLA 216
EIS+LNPI +H S S KPFYAILHRI+ G++IDLEP + ++ AGA++S KLA
Sbjct: 143 FGEISILNPITLHCMSSS--KPFYAILHRIEEGLLIDLEPVSPDEVPVTAAGALRSYKLA 200
Query: 217 VSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPY 276
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FHDD HGEV++E R DLEPY
Sbjct: 201 AKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCREDLEPY 260
Query: 277 LGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCH 336
LG+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 LGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCH 320
Query: 337 LQYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACE 386
QYM+NMGS+ASLVM+V IN +DS LWGLVVCHH SPR++PFPLRYACE
Sbjct: 321 AQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFPLRYACE 380
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
F++Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP I+TQSP+IMDLV+CDGA
Sbjct: 381 FMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVECDGA 440
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
AL+Y + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGM
Sbjct: 441 ALFYRDKLWSLGVTPTETQIRDLIHWVLKSHGGNTGFTTESLMESGYPDASVLGESICGM 500
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A IT KDFLFWFRS AKE+KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW
Sbjct: 501 AAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSMPW 559
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
+ E++AI+SLQ++++ S Q E SK N +++Q VDEL + EMVRLI+T
Sbjct: 560 DDMEMDAINSLQLIIKGSLQ----EEHSKTVENVPFVDNRVQKVDELCVIVNEMVRLIDT 615
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
A PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V N++ AL G
Sbjct: 616 AAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSAETVTNMLALALKG 674
Query: 687 EEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIR 746
E++ E+++R F +++ S +Y++VN C SRD KNNV GVCF+GQD+T +K L + + R
Sbjct: 675 SEERGAEIRIRAFGPKRKSSSIYLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLTENYSR 734
Query: 747 LQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF- 805
+QGDY I+ S + LIPPIF ++E+ CSEWN AM+K++G R E + KML E+F +
Sbjct: 735 MQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEVFTSNE 794
Query: 806 --CRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVI 862
C +K D LTK I L +GQ E FGF++R G F+E L+A++RTD EGKV
Sbjct: 795 YGCPVKDHDTLTKMRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDIEGKVT 854
Query: 863 GCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSI 922
G CF+Q+ P+LQ AL+ Q + + I + +LAY+RQEVKNP I F+ L +S +
Sbjct: 855 GVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQNSLNTSGL 914
Query: 923 SENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
SE+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 SEDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 947
>gi|240119419|dbj|BAH79258.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/940 (51%), Positives = 649/940 (69%), Gaps = 34/940 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLI 93
+ + DA L FE+S + F+YS SV ++ P +P ++ YL KIQRG LI
Sbjct: 20 VTSQFLVDATLHRNFEES---ERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 76
Query: 94 QPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGA 149
QPFGC++ V+E ++I +SEN EML L + E E IG D ++LF P +
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALS-IGTDVKSLFQSPGSS 135
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA EIS+LNPI +H S S KPFYAILHRI+ G+VIDLEP + ++ AGA
Sbjct: 136 ALQKAIDFGEISILNPITLHCMSSS--KPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGA 193
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
++S KLA +ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FHDD HGEV++E
Sbjct: 194 LRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECC 253
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
R DLEPYLG+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STL
Sbjct: 254 REDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTL 313
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPF 379
R+PHGCH QYM+NMGS+ASLVM+V IN +DS LWGLVVCHH SPR++PF
Sbjct: 314 RAPHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPF 373
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEF++Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP I+TQSP+IMD
Sbjct: 374 PLRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMD 433
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL+Y + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++L
Sbjct: 434 LVKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVL 493
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G+++CGMA IT KDFLFWFRS AKE+KWGGA+H P +D G +MHPRSSFKAF+E+V
Sbjct: 494 GESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIV 552
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
+ +S PW+ E++AI+SLQ++++ S Q E SK N +++Q VDEL + E
Sbjct: 553 RWKSMPWDDMEMDAINSLQLIIKGSLQ----EEHSKTVENVPFVDNRVQKVDELCVIVNE 608
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRLI+TA PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V N+
Sbjct: 609 MVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSAETVTNM 667
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKV 739
+ AL G E++ E+++R F +++ S + ++VN C SRD KNNV GVCF+GQD+T +K
Sbjct: 668 LALALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKT 727
Query: 740 LMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPR 799
L + + R+QGDY I+ S + LIPPIF ++E+ CSEWN AM+K++G R E + KML
Sbjct: 728 LTENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLG 787
Query: 800 EIFGNF---CRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRT 855
E+F + C +K D LTK I L +GQ E FGF++R G F+E L+A++RT
Sbjct: 788 EVFTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRT 847
Query: 856 DAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHK 915
D EGKV G CF+Q+ P+LQ AL+ Q + + I + +LAY+RQEVKNP I F+
Sbjct: 848 DIEGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQN 907
Query: 916 LLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
L +S +SE+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 908 SLHTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 947
>gi|240119423|dbj|BAH79260.1| phytochrome C [Cardamine nipponica]
Length = 1111
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/940 (50%), Positives = 648/940 (68%), Gaps = 34/940 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLI 93
+ + DA L FE+S + F+YS SV ++ P +P ++ YL KIQRG LI
Sbjct: 19 VTSQFLVDATLHRNFEES---ERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 75
Query: 94 QPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGA 149
QPFGC++ V+E ++I +SEN EML L + E E IG D ++LF P +
Sbjct: 76 QPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALS-IGTDVKSLFQSPGSS 134
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA EIS+LNPI +H S S KPFYAILHRI+ G+VIDLEP + ++ AGA
Sbjct: 135 ALQKAIDFGEISILNPITLHCMSSS--KPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGA 192
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
++S KLA +ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FHDD HGEV++E
Sbjct: 193 LRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECC 252
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
R DLEPYLG+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STL
Sbjct: 253 REDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTL 312
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPF 379
R+PHGCH QYM+NMGS+ASLVM+V IN +DS LWGLVVCHH SPR++PF
Sbjct: 313 RAPHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPF 372
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEF++Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP I+TQSP+IMD
Sbjct: 373 PLRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMD 432
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL+Y + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++
Sbjct: 433 LVKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVF 492
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G+++CGMA IT KDFLFWFRS AKE+KWGGA+H P +D G +MHPRSSFKAF+E+V
Sbjct: 493 GESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIV 551
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
+ +S PW+ E++AI+SLQ++++ S Q E SK N +++Q VDEL + E
Sbjct: 552 RWKSMPWDDMEMDAINSLQLIIKGSLQ----EEHSKTVENVPFVDNRVQKVDELCVIVNE 607
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRLI+TA PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V N+
Sbjct: 608 MVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSAETVTNM 666
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKV 739
+ AL G E++ E+++R F +++ S + ++VN C SRD KNNV GVCF+GQD+T +K
Sbjct: 667 LALALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKT 726
Query: 740 LMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPR 799
L + + R+QGDY I+ S + LIPPIF ++E+ CSEWN AM+K++G R E + KML
Sbjct: 727 LTENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLG 786
Query: 800 EIFGNF---CRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRT 855
E+F + C +K D LTK I L +GQ E FGF++R G F+E L+A++RT
Sbjct: 787 EVFTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRT 846
Query: 856 DAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHK 915
D EGKV G CF+Q+ P+LQ AL+ Q + + I + +LAY+RQEVKNP I F+
Sbjct: 847 DIEGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQN 906
Query: 916 LLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
L +S +SE+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 907 SLHTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|240119411|dbj|BAH79254.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/941 (50%), Positives = 650/941 (69%), Gaps = 36/941 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLI 93
+ + DA L FE+S + F+YS SV ++ P +P ++ YL KIQRG LI
Sbjct: 20 VTSQFLVDATLHRNFEES---ERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 76
Query: 94 QPFGCMLAVEEPTFRIIGYSENCLEML-----DLRSRSEDFELNGLIGIDARTLFTPPSG 148
QPFGC++ V+E ++I +SEN EML + S + L+ IG D ++LF P
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTEEMLGSIPHTVPSMEQREALS--IGTDVKSLFQSPGS 134
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
++L KA EIS+LNPI +H S S KPFYAILHRI+ G+VIDLEP + ++ AG
Sbjct: 135 SALQKAIDFGEISILNPITLHCMSSS--KPFYAILHRIEEGLVIDLEPVSPDEVPVTAAG 192
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A++S KLA +ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FHDD HGEV++E
Sbjct: 193 ALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAEC 252
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
R DLEPYLG+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L ST
Sbjct: 253 CREDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGST 312
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIP 378
LR+PHGCH QYM+NMGS+ASLVM+V IN +DS LWGLVVCHH SPR++P
Sbjct: 313 LRAPHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVP 372
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEF++Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP I+TQSP+IM
Sbjct: 373 FPLRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIM 432
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAAL+Y + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++
Sbjct: 433 DLVKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASV 492
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG+++CGMA IT KDFLFWFRS AKE+KWGGA+H P +D G +MHPRSSFKAF+E+
Sbjct: 493 LGESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEI 551
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
V+ +S PW+ E++AI+SLQ++++ S Q E SK N +++Q VDEL +
Sbjct: 552 VRWKSMPWDDMEMDAINSLQLIIKGSLQ----EEHSKTVENVPFVDNRVQKVDELCVIVN 607
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLI+TA PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V N
Sbjct: 608 EMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSAETVTN 666
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
++ AL G E++ E+++R F +++ S + ++VN C SRD KNNV GVCF+GQD+T +K
Sbjct: 667 MLALALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQK 726
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
L + + R+QGDY I+ S + LIPPIF ++E+ CSEWN AM+K++G R E + KML
Sbjct: 727 TLTENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLL 786
Query: 799 REIFGNF---CRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRR 854
E+F + C +K D LTK I L +GQ E FGF++R G F+E L+A++R
Sbjct: 787 GEVFTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKR 846
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
TD EGKV G CF+Q+ P+LQ AL+ Q + + I + +LAY+RQEVKNP I F+
Sbjct: 847 TDIEGKVTGVLCFLQVPSPELQYALQVQRVSEQAITCALDKLAYLRQEVKNPEKAISFLQ 906
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
L +S +SE+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 907 NSLHTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 947
>gi|240119409|dbj|BAH79253.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/941 (50%), Positives = 650/941 (69%), Gaps = 36/941 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLI 93
+ + DA L FE+S + F+YS SV ++ P +P ++ YL KIQRG LI
Sbjct: 20 VTSQFLVDATLHRNFEES---ERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 76
Query: 94 QPFGCMLAVEEPTFRIIGYSENCLEML-----DLRSRSEDFELNGLIGIDARTLFTPPSG 148
QPFGC++ V+E ++I +SEN EML + S + L+ IG D ++LF P
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTEEMLGSIPHTVPSMEQREALS--IGTDVKSLFQSPGS 134
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
++L KA EIS+LNPI +H S S KPFYAILHRI+ G+VIDLEP + ++ AG
Sbjct: 135 SALQKAIDFGEISILNPITLHCMSSS--KPFYAILHRIEEGLVIDLEPVSPDEVPVTAAG 192
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A++S KLA +ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FHDD HGEV++E
Sbjct: 193 ALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAEC 252
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
R DLEPYLG+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L ST
Sbjct: 253 CREDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGST 312
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIP 378
LR+PHGCH QYM+NMGS+ASLVM+V IN +DS LWGLVVCHH SPR++P
Sbjct: 313 LRAPHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVP 372
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEF++Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP I+TQSP+IM
Sbjct: 373 FPLRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIM 432
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAAL+Y + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++
Sbjct: 433 DLVKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASV 492
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG+++CGMA IT KDFLFWFRS AKE+KWGGA+H P +D G +MHPRSSFKAF+E+
Sbjct: 493 LGESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEI 551
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
V+ +S PW+ E++AI+SLQ++++ S Q E SK N +++Q VDEL +
Sbjct: 552 VRWKSMPWDDMEMDAINSLQLIIKGSLQ----EEHSKTVENVPFVDNRVQKVDELCVIVN 607
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLI+TA PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V N
Sbjct: 608 EMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSAETVTN 666
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
++ AL G E++ E+++R F +++ S + ++VN C SRD KNNV GVCF+GQD+T +K
Sbjct: 667 MLALALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQK 726
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
L + + R+QGDY I+ S + LIPPIF ++E+ CSEWN AM+K++G R E + KML
Sbjct: 727 TLTENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLL 786
Query: 799 REIFGNF---CRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRR 854
E+F + C +K D LTK I L +GQ E FGF++R G F+E L+A++R
Sbjct: 787 GEVFTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKR 846
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
TD EGKV G CF+Q+ P+LQ AL+ Q + + I + +LAY+RQEVKNP I F+
Sbjct: 847 TDIEGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQ 906
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
L +S +SE+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 907 NSLHTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 947
>gi|240119407|dbj|BAH79252.1| phytochrome C [Cardamine nipponica]
gi|240119413|dbj|BAH79255.1| phytochrome C [Cardamine nipponica]
gi|240119415|dbj|BAH79256.1| phytochrome C [Cardamine nipponica]
gi|240119417|dbj|BAH79257.1| phytochrome C [Cardamine nipponica]
gi|240119421|dbj|BAH79259.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/940 (51%), Positives = 648/940 (68%), Gaps = 34/940 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLI 93
+ + DA L FE+S + F+YS SV ++ P +P ++ YL KIQRG LI
Sbjct: 20 VTSQFLVDATLHRNFEES---ERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 76
Query: 94 QPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGA 149
QPFGC++ V+E ++I +SEN EML L + E E IG D ++LF P +
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALS-IGTDVKSLFQSPGSS 135
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA EIS+LNPI +H S S KPFYAILHRI+ G+VIDLEP + ++ AGA
Sbjct: 136 ALQKAIDFGEISILNPITLHCMSSS--KPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGA 193
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
++S KLA +ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FHDD HGEV++E
Sbjct: 194 LRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECC 253
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
R DLEPYLG+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STL
Sbjct: 254 REDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTL 313
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPF 379
R+PHGCH QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PF
Sbjct: 314 RAPHGCHAQYMSNMGSVASLVMSVTINCSDSDDMNRDLQTGRSLWGLVVCHHASPRFMPF 373
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEF++Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP I+TQSP+IMD
Sbjct: 374 PLRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMD 433
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAAL+Y + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++L
Sbjct: 434 LVKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVL 493
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G+++CGMA IT KDFLFWFRS AKE+KWGGA+H P +D G +MHPRSSFKAF+E+V
Sbjct: 494 GESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIV 552
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
+ +S PW+ E++AI+SLQ++++ S Q E SK N +++Q VDEL + E
Sbjct: 553 RWKSMPWDDMEMDAINSLQLIIKGSLQ----EEHSKTVENVPFVDNRVQKVDELCVIVNE 608
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRLI+TA PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V N+
Sbjct: 609 MVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSAETVTNM 667
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKV 739
+ AL G E++ E+++R F +++ S + ++VN C SRD KNNV GVCF+GQD+T +K
Sbjct: 668 LALALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKT 727
Query: 740 LMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPR 799
L + + R+QGDY I+ S + LIPPIF ++E+ CSEWN AM+K++G R E + KML
Sbjct: 728 LTENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLG 787
Query: 800 EIFGNF---CRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRT 855
E+F + C +K D LTK I L +GQ E FGF++R G F+E L+A++RT
Sbjct: 788 EVFTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRT 847
Query: 856 DAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHK 915
D EGKV G CF+Q+ P+LQ AL+ Q + + I + +LAY+RQEVKNP I F+
Sbjct: 848 DIEGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQN 907
Query: 916 LLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
L +S +SE+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 908 SLHTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 947
>gi|406685511|gb|AFS51196.1| phytochrome P, partial [Dacrydium nausoriense]
Length = 660
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/663 (70%), Positives = 542/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL------ 134
AYLS++QRGG IQP GCMLAVEE F+II +S+N LEMLDL +S EL L
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPTMELGKLGGGEVL 60
Query: 135 -IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S SL KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP I+TQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ ++V EES VE ++ RAL GEE+KNVE+KLR F QK+ +Y++VNAC+SRDY +N
Sbjct: 598 VHDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKEKEAIYLVVNACSSRDYTDN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685613|gb|AFS51247.1| phytochrome P, partial [Prumnopitys ferruginoides]
Length = 662
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/665 (71%), Positives = 548/665 (82%), Gaps = 22/665 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGCMLAVEE F+II YS+N LEMLDL ++ + EL
Sbjct: 1 AYLSRLQRGGTIQPFGCMLAVEEMGFKIIAYSQNALEMLDLMPQAVPNMELGKPGGGGAV 60
Query: 134 -LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVI 192
IG D RTLFTP S +LAKAA +REISL+NPI VHS KPFYAI+HRIDVGIVI
Sbjct: 61 LTIGTDVRTLFTPASARALAKAAMAREISLMNPIWVHSQYTG--KPFYAIVHRIDVGIVI 118
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
DLEP + GD ++S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM
Sbjct: 119 DLEPVRMGDASMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVM 178
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
+Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV V
Sbjct: 179 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSANPVKV 238
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMK 362
+QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D SMK
Sbjct: 239 VQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGGWTSGRVSMK 298
Query: 363 LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDML 422
LWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDML
Sbjct: 299 LWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDML 358
Query: 423 LRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTG 482
LRDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TG
Sbjct: 359 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGXTWCLGVTPTEAQIKDIADWLLEYHGDSTG 418
Query: 483 LSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDN 542
LSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+
Sbjct: 419 LSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDD 478
Query: 543 GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQ 602
G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N +K + +
Sbjct: 479 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN-TKTMVHARL 537
Query: 603 NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKS 662
N K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKS
Sbjct: 538 NDMKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKS 597
Query: 663 LIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKN 722
L+ ++V EES +VE ++ RAL GEE+KNVE+KLR F +KQ +Y++ NAC+SRDY +
Sbjct: 598 LVHDLVFEESAESVEKMLYRALRGEEEKNVEVKLRTFGPKKQKEAIYLVANACSSRDYTD 657
Query: 723 NVKGV 727
N+ GV
Sbjct: 658 NIVGV 662
>gi|406685525|gb|AFS51203.1| phytochrome P, partial [Manoao colensoi]
Length = 657
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/660 (70%), Positives = 544/660 (82%), Gaps = 17/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG---LIGI 137
AYLS++QRGG IQPFGCMLAVEE F++I YS+N LEMLD+ +S + +L IG
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKVIAYSQNALEMLDIMPQSVPNMDLGKPVLTIGT 60
Query: 138 DARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPS 197
D RTLFTP S +L KAA ++EISL+NPI VHS KPFYAI+HRIDVG+VIDLEP
Sbjct: 61 DVRTLFTPASARALEKAAMTQEISLMNPIWVHSQHTG--KPFYAIVHRIDVGMVIDLEPL 118
Query: 198 KSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFH 257
++GD ++S AGAVQSQKLAV AISRLQ+LP GDIG+LCD+VVEDV++LTGYDRVM Y FH
Sbjct: 119 RTGDASMSAAGAVQSQKLAVRAISRLQSLPAGDIGVLCDSVVEDVRELTGYDRVMAYKFH 178
Query: 258 DDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKE 317
+D+HGEVV+E+RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI DC A PV VIQS++
Sbjct: 179 EDEHGEVVAEMRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIFDCSANPVQVIQSEK 238
Query: 318 LKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKLWGLV 367
+++PLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKLWGLV
Sbjct: 239 MRRPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGAGTSGRSSMKLWGLV 298
Query: 368 VCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAP 427
VCHHTSPR +PFPLRYACEFL+QAF LQL MEL +A QL EK+ILRTQ LLCDMLLRDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELHLAAQLTEKHILRTQTLLCDMLLRDAP 358
Query: 428 FSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDS 487
IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGLSTDS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALYYGGTTWSLGVTPTEAQVKDIADWLLEYHGDSTGLSTDS 418
Query: 488 LAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMH 547
LA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MH
Sbjct: 419 LADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 548 PRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM 607
PRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N +K + + N K+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN-TKTMVHARLNDLKL 537
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP E MGKSL+ ++
Sbjct: 538 QGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGETMGKSLVHDL 597
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
V EES +V+ ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N+ GV
Sbjct: 598 VFEESAESVQKMLYRALRGEEEKNVEIKLRTFGPQKQKEAIYLVVNACSSRDYTENIVGV 657
>gi|406685643|gb|AFS51262.1| phytochrome P, partial [Picea breweriana]
Length = 656
Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/660 (71%), Positives = 546/660 (82%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E +L L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQLEVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P K+GD +S AGAVQSQKLAV AISRLQ+LP GDI LLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLKTGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEF++QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+A ITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAAFLGDAVCGMASATITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNILR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VD +G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES VE ++C AL GEE+KNVE+ LR F QKQ V+++VNAC+SRD+ +N+ G
Sbjct: 597 LVFEESVERVEKMLCNALRGEEEKNVEMILRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685509|gb|AFS51195.1| phytochrome P, partial [Dacrydium guillauminii]
Length = 660
Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/663 (70%), Positives = 541/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL------ 134
AYLS++QRGG IQP GCMLAVEE F+II +S+N LEMLDL +S EL L
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 135 -IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S SL KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP I+TQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDI WLL HGD TGL
Sbjct: 359 RDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDITEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ ++V EES VE ++ RAL GEE+KNVE+KLR F QK+ +Y++VNAC+SRDY +N
Sbjct: 598 VHDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKEKEAIYLVVNACSSRDYTDN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685507|gb|AFS51194.1| phytochrome P, partial [Dacrydium balansae]
Length = 660
Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/663 (70%), Positives = 542/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL------ 134
AYLS++QRGG IQP GCMLAVEE F+II +S+N LEMLDL +S EL L
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 135 -IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S SL KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP I+TQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ ++V EES VE ++ RAL GEE+KNVE+KLR F +QK+ +Y++VNAC+ RDY +N
Sbjct: 598 VHDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGIQKEKEAIYLVVNACSCRDYTDN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685513|gb|AFS51197.1| phytochrome P, partial [Dacrydium xanthandrum]
Length = 660
Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/663 (70%), Positives = 541/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL------ 134
AYLS++QRGG IQPFGCMLAVEE F+II +S+N LEMLDL +S EL L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 135 -IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S L KAA + +IS +NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARGLEKAAMAPDISFMNPIWVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP I+TQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ ++V EES VE ++ RAL GEE+KNVE+KLR F QK+ +Y++VNAC+SRDY +N
Sbjct: 598 VHDLVLEESAECVEKMLYRALRGEEEKNVEIKLRIFGTQKEKEAIYLVVNACSSRDYTDN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685505|gb|AFS51193.1| phytochrome P, partial [Dacrycarpus imbricatus]
Length = 661
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/664 (70%), Positives = 541/664 (81%), Gaps = 21/664 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG +QPFGCMLAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTLQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP SG +L KAA + +ISL+NPI VHS KPF AI+HRIDV +VID
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVAMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM
Sbjct: 119 LEPLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMA 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YRFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGS+ASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL M+LQ+A Q+ EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMQLQLAAQMTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELT LP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ ++V EES V+ ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY +N
Sbjct: 598 VHDIVLEESAECVDKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDN 657
Query: 724 VKGV 727
+ GV
Sbjct: 658 IVGV 661
>gi|406685605|gb|AFS51243.1| phytochrome P, partial [Podocarpus spinulosus]
Length = 660
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGVVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP SGD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRGSGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W VGVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCVGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685499|gb|AFS51190.1| phytochrome P, partial [Dacrycarpus cinctus]
gi|406685501|gb|AFS51191.1| phytochrome P, partial [Dacrycarpus kinabaluensis]
Length = 660
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/663 (70%), Positives = 540/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG +QPFGCMLAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTLQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP SG +L KAA + +ISL+NPI VHS KPF AI+HRIDV +VID
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVAMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM
Sbjct: 119 LEPLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMA 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YRFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGS+ASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELT LP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ ++V EES V+ ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY +N
Sbjct: 598 VHDIVLEESAECVDKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|108802766|gb|ABG21334.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802768|gb|ABG21335.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/932 (51%), Positives = 645/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLV 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV+SE R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVISECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|406685579|gb|AFS51230.1| phytochrome P, partial [Podocarpus macrophyllus]
Length = 661
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/664 (70%), Positives = 540/664 (81%), Gaps = 21/664 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV +I
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKGV 727
+ GV
Sbjct: 658 IVGV 661
>gi|406685647|gb|AFS51264.1| phytochrome P, partial [Picea mariana]
Length = 656
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/660 (71%), Positives = 547/660 (82%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E +L L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQLEVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P K+GD +S AGAVQSQKLAV AISRLQ+LP GDI LLCD+VVE+V++LTGYDRVM+Y
Sbjct: 118 PLKTGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDSVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEF++QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSK+FLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASARITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VD +G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES V+ ++C A+ GEE+KNVE+ LR F QKQ V+++VNAC+SRD+ NN+ G
Sbjct: 597 LVLEESVERVKKMLCNAIRGEEEKNVEMILRTFGPQKQKEAVFLVVNACSSRDFTNNIVG 656
>gi|108802772|gb|ABG21337.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802777|gb|ABG21339.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802779|gb|ABG21340.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802785|gb|ABG21343.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802787|gb|ABG21344.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802789|gb|ABG21345.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802791|gb|ABG21346.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802801|gb|ABG21351.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802813|gb|ABG21357.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802817|gb|ABG21359.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/932 (51%), Positives = 645/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS SV ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASVNLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|406685561|gb|AFS51221.1| phytochrome P, partial [Podocarpus cunninghamii]
Length = 660
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAATAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDS 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES +E ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECLEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685469|gb|AFS51175.1| phytochrome P, partial [Araucaria hunsteinii]
Length = 675
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/678 (69%), Positives = 545/678 (80%), Gaps = 36/678 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYL+++QRGG IQPFGCMLAVEE +F+I+ YSEN +EMLDL R E +
Sbjct: 1 AYLTRMQRGGTIQPFGCMLAVEETSFQIVAYSENAVEMLDLSPQSVPNMDMDRDEAMGSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D R LFTP S +L KAA ++EIS++NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVITIGTDVRNLFTPSSARALEKAAMAQEISMMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+VIDLEP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV V+Q+ ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVVQAGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 ------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 299 GGGGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 358
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KD
Sbjct: 359 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 418
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
IA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMATARITSKDFLFWFRSHTAKE+
Sbjct: 419 IADWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEM 478
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++
Sbjct: 479 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 538
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVA
Sbjct: 539 DDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVA 597
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGLP EAMGKSL +++ +ES V+ ++ AL GEE+KNVE+KLR F QKQ +
Sbjct: 598 ELTGLPVGEAMGKSLAHDLIFDESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAI 657
Query: 709 YILVNACTSRDYKNNVKG 726
Y++VNAC+SRDY +N+ G
Sbjct: 658 YLVVNACSSRDYTDNIVG 675
>gi|406685601|gb|AFS51241.1| phytochrome P, partial [Podocarpus salomonensis]
Length = 660
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 SIGTDVRTLFTPSSARALEKAVMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTAWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKELKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ+++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDGSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES G VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAGCVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685635|gb|AFS51258.1| phytochrome P, partial [Larix decidua]
Length = 655
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/660 (71%), Positives = 549/660 (83%), Gaps = 20/660 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEFLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P K+GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGY+RVM+Y
Sbjct: 118 PLKTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGS+ASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PMGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL+ +
Sbjct: 537 LQGMDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES VE ++ AL GEE+KNVE+ LR F QKQ + V+++VNAC+SRD+ +N+ G
Sbjct: 597 LVFEESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQEA-VFLVVNACSSRDFTDNIVG 655
>gi|406685455|gb|AFS51168.1| phytochrome P, partial [Araucaria araucana]
Length = 675
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/678 (68%), Positives = 546/678 (80%), Gaps = 36/678 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYL+++QRGG IQPFGC LAVEE +F I+ YSEN +E+LDL R E +
Sbjct: 1 AYLTRMQRGGTIQPFGCTLAVEETSFLIVAYSENAVELLDLSPQSVPNMDMDRDEAMGSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D RTLFTP S +L KAA ++EIS++NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVITIGTDVRTLFTPSSARALEKAAMAQEISMMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+VIDLEP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV V+Q+ +L+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVVQAGQLQQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 ------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 299 GGGGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 358
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KD
Sbjct: 359 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 418
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
IA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMATARITSKDFLFWFRSHTAKE+
Sbjct: 419 IADWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEM 478
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++
Sbjct: 479 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 538
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVA
Sbjct: 539 DDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVA 597
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGLP EAMGKSL+ +++ +ES V+ ++C AL GEE+KNVE+KLR F QKQ +
Sbjct: 598 ELTGLPVGEAMGKSLVHDLIFDESANTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAI 657
Query: 709 YILVNACTSRDYKNNVKG 726
Y++VNAC+SRDY +N+ G
Sbjct: 658 YLVVNACSSRDYTDNIVG 675
>gi|108802811|gb|ABG21356.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/932 (51%), Positives = 645/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS SV ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASVNLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|406685555|gb|AFS51218.1| phytochrome P, partial [Podocarpus chingianus]
Length = 660
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/663 (70%), Positives = 539/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|356572880|ref|XP_003554593.1| PREDICTED: phytochrome type A-like [Glycine max]
gi|227452663|dbj|BAH57342.1| phytochrome A [Glycine max]
gi|227452667|dbj|BAH57344.1| phytochrome A [Glycine max]
Length = 1130
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/923 (50%), Positives = 636/923 (68%), Gaps = 33/923 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSVISPPEGVP-------EEQITAYLSKIQRGGLIQPFG 97
DA L A FE+S +S + R +SP V + ++YL + Q+ LIQPFG
Sbjct: 33 DAKLHATFEESGSSFDYSSSVR--MSPAGTVSGDHQPRSDRATSSYLHQTQKIKLIQPFG 90
Query: 98 CMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAK 153
C+LA++E T ++I YSEN EML + S + D G IG D RT+FT PS A++ K
Sbjct: 91 CLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIRTIFTAPSSAAIQK 149
Query: 154 AAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQ 213
A ++SL NPILVH + KPFYAI+HR+ ++ID EP K + ++ +GA+QS
Sbjct: 150 ALRFGDVSLHNPILVHCKTSG--KPFYAIIHRVTGSVIIDFEPVKPHEVPMTASGALQSY 207
Query: 214 KLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDL 273
KLA AI+RL++L G++ LC+T+V +V +LTGYDRVM Y FH+DDHGEV++E++R L
Sbjct: 208 KLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVIAEVKRPGL 267
Query: 274 EPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPH 333
EPYLG+H+PA DIPQA RFLF +N+VRMI DC A V V+Q K++ L L STLR+ H
Sbjct: 268 EPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLCGSTLRAAH 327
Query: 334 GCHLQYMTNMGSIASLVMAVIINSKD-------------SMKLWGLVVCHHTSPRYIPFP 380
CHLQYM NM S ASLVMAV++N D S +LWGLVVCHHT+PR++PFP
Sbjct: 328 SCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHTTPRFVPFP 387
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYAC+FL Q F++ + EL++ Q+ EKNIL+TQ LLCDML++ P IV+QSP+IMDL
Sbjct: 388 LRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVSQSPNIMDL 447
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAAL Y + W +GVTP+ESQ+K+IA WL H D TG TDSL++AG+PGAA LG
Sbjct: 448 VKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAGFPGAAALG 507
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
CGMA ARI SKD LFWFRSHTA E++WGGAKH P +D+G ++HPRSSFKAFLEVVK
Sbjct: 508 DIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSFKAFLEVVK 567
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E +AIHSLQ+++RD+F+E + S +T+ K++G+ EL +V E+
Sbjct: 568 TRSLPWKTYETDAIHSLQLILRDAFKETQSMEISTYAIDTRLGDLKIEGMQELDAVTSEV 627
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VRLIETAT PI VD +G INGWN K+AELTGLP EA+GK L+ +V + S V+ ++
Sbjct: 628 VRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLL-TLVEDFSVDRVKKML 686
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVL 740
AL GEE++NV+ +++ ++ + ++VNAC SRD ++NV GVCF+ QDIT +K +
Sbjct: 687 DMALQGEEERNVQFEIQTHHMKIDSGPISLVVNACASRDLQDNVVGVCFLAQDITAQKTM 746
Query: 741 MDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPRE 800
MDKF R++GDY+AI+Q+ NPLIPPIF +DE C EWN+AM K+TGW R EV+ KML E
Sbjct: 747 MDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNSAMAKLTGWKREEVMDKMLLGE 806
Query: 801 IFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
+FG CR++ + + F I+L + G TE PFGFF R G+ VE L+ +++ DA
Sbjct: 807 VFGTQIACCRLRNHEAVVNFSIVLNTAMAGLETEKVPFGFFARDGKHVECILSMTKKLDA 866
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
EG V G FCF+Q+ +LQ AL Q + + ++K+L Y++++++NPL GI F KLL
Sbjct: 867 EGVVTGVFCFLQLASAELQQALHIQRISEQTSLKRLKDLTYLKRQIQNPLYGIMFSRKLL 926
Query: 918 ESSSISENQRQYLETSDACERQI 940
E + + Q+Q+L+T C+RQI
Sbjct: 927 EGTELGAEQKQFLQTGIRCQRQI 949
>gi|343408417|gb|AEM06734.1| phytochrome C [Arabidopsis thaliana]
gi|343408419|gb|AEM06735.1| phytochrome C [Arabidopsis thaliana]
gi|343408425|gb|AEM06738.1| phytochrome C [Arabidopsis thaliana]
gi|343408429|gb|AEM06740.1| phytochrome C [Arabidopsis thaliana]
gi|343408431|gb|AEM06741.1| phytochrome C [Arabidopsis thaliana]
gi|343408435|gb|AEM06743.1| phytochrome C [Arabidopsis thaliana]
gi|343408437|gb|AEM06744.1| phytochrome C [Arabidopsis thaliana]
gi|343408445|gb|AEM06748.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/932 (51%), Positives = 645/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS SV ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASVNLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|108802783|gb|ABG21342.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802815|gb|ABG21358.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/932 (51%), Positives = 645/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|227452665|dbj|BAH57343.1| phytochrome A [Glycine max]
Length = 1130
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/923 (50%), Positives = 636/923 (68%), Gaps = 33/923 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSVISPPEGVP-------EEQITAYLSKIQRGGLIQPFG 97
DA L A FE+S +S + R +SP V + ++YL + Q+ LIQPFG
Sbjct: 33 DAKLHATFEESGSSFDYSSSVR--MSPAGTVSGDHQPRSDRATSSYLHQTQKIKLIQPFG 90
Query: 98 CMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAK 153
C+LA++E T ++I YSEN EML + S + D G IG D RT+FT PS A++ K
Sbjct: 91 CLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIRTIFTAPSSAAIQK 149
Query: 154 AAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQ 213
A ++SL NPILVH + KPFYAI+HR+ ++ID EP K + ++ +GA+QS
Sbjct: 150 ALRFGDVSLHNPILVHCKTSG--KPFYAIIHRVTGSVIIDFEPVKPHEVPMTASGALQSY 207
Query: 214 KLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDL 273
KLA AI+RL++L G++ LC+T+V +V +LTGYDRVM Y FH+DDHGEV++E++R L
Sbjct: 208 KLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVIAEVKRPGL 267
Query: 274 EPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPH 333
EPYLG+H+PA DIPQA RFLF +N+VRMI DC A V V+Q K++ L L STLR+ H
Sbjct: 268 EPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLCGSTLRAAH 327
Query: 334 GCHLQYMTNMGSIASLVMAVIINSKD-------------SMKLWGLVVCHHTSPRYIPFP 380
CHLQYM NM S ASLVMAV++N D S +LWGLVVCHHT+PR++PFP
Sbjct: 328 SCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHTTPRFVPFP 387
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYAC+FL Q F++ + EL++ Q+ EKNIL+TQ LLCDML++ P IV+QSP+IMDL
Sbjct: 388 LRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVSQSPNIMDL 447
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAAL Y + W +GVTP+ESQ+K+IA WL H D TG TDSL++AG+PGAA LG
Sbjct: 448 VKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAGFPGAAALG 507
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
CGMA ARI SKD LFWFRSHTA E++WGGAKH P +D+G ++HPRSSFKAFLEVVK
Sbjct: 508 DIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSFKAFLEVVK 567
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E +AIHSLQ+++RD+F+E + S +T+ K++G+ EL +V E+
Sbjct: 568 TRSLPWKTYETDAIHSLQLILRDAFKETQSMEISTYAIDTRLGDLKIEGMQELDAVTSEV 627
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VRLIETAT PI VD +G INGWN K+AELTGLP EA+GK L+ +V + S V+ ++
Sbjct: 628 VRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLL-TLVEDFSVDRVKKML 686
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVL 740
AL GEE++NV+ +++ ++ + ++VNAC SRD ++NV GVCF+ QDIT +K +
Sbjct: 687 DMALQGEEERNVQFEIQTHHMKIDSGPISLVVNACASRDLQDNVVGVCFLAQDITAQKTM 746
Query: 741 MDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPRE 800
MDKF R++GDY+AI+Q+ NPLIPPIF +DE C EWN+AM K+TGW R EV+ KML E
Sbjct: 747 MDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNSAMAKLTGWKREEVMDKMLLGE 806
Query: 801 IFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
+FG CR++ + + F I+L + G TE PFGFF R G+ VE L+ +++ DA
Sbjct: 807 VFGTQIACCRLRNHEAVVNFSIVLNTAMAGLETEKVPFGFFARDGKHVECILSMTKKLDA 866
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
EG V G FCF+Q+ +LQ AL Q + + ++K+L Y++++++NPL GI F KLL
Sbjct: 867 EGVVTGVFCFLQLASAELQQALHIQRISEQTSLKRLKDLTYLKRQIQNPLYGIMFSRKLL 926
Query: 918 ESSSISENQRQYLETSDACERQI 940
E + + Q+Q+L+T C+RQI
Sbjct: 927 EGTELGAEQKQFLQTGIRCQRQI 949
>gi|406685503|gb|AFS51192.1| phytochrome P, partial [Dacrycarpus compactus]
Length = 661
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/664 (70%), Positives = 541/664 (81%), Gaps = 21/664 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG +QPFGCM+AVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTLQPFGCMVAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP SG +L KAA + +ISL+NPI VHS KPF AI+HRIDV +VID
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVAMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM
Sbjct: 119 LEPLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMA 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HG+VV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YRFHEDEHGDVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGS+ASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELT LP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ ++V EES V+ ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY +N
Sbjct: 598 VHDIVLEESAECVDKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDN 657
Query: 724 VKGV 727
+ GV
Sbjct: 658 IVGV 661
>gi|406685559|gb|AFS51220.1| phytochrome P, partial [Podocarpus costalis]
Length = 660
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/663 (70%), Positives = 539/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHCSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685515|gb|AFS51198.1| phytochrome P, partial [Dacrydium elatum]
Length = 660
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/663 (70%), Positives = 542/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL------ 134
AYLS++QRGG IQPFGCMLAVEE F+II +S+N LEMLDL +S EL L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 135 -IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSGARALEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRV++
Sbjct: 119 LEPLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVVV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QLAEK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLAEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP I+TQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ ++V EES VE ++ RAL GEE+KNVE+KLR F QK+ +Y++VNA +SRDY +N
Sbjct: 598 VHDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKEKEAIYLVVNAGSSRDYTDN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|108802821|gb|ABG21361.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/932 (51%), Positives = 645/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS SV ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASVNLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPIDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|406685589|gb|AFS51235.1| phytochrome P, partial [Podocarpus polyspermus]
Length = 660
Score = 965 bits (2494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/663 (70%), Positives = 539/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NP+ VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685471|gb|AFS51176.1| phytochrome P, partial [Araucaria laubenfelsii]
Length = 677
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/680 (69%), Positives = 544/680 (80%), Gaps = 38/680 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYLS++QRGG IQPFGCMLAVEE TF II YSEN +EMLDL R E +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D RTLFT S +L KAA + EISL+NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+V+DLEP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 --------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQL 406
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL
Sbjct: 299 GGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQL 358
Query: 407 AEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQL 466
EK+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+
Sbjct: 359 TEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQI 418
Query: 467 KDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAK 526
KDIA WLL H D TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAK
Sbjct: 419 KDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAK 478
Query: 527 EVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ 586
E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ
Sbjct: 479 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQ 538
Query: 587 EMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
++++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAK
Sbjct: 539 DIDDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAK 597
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
VAELTGLP EAMGKSL+ +++ EES V+ ++ +AL GEE+KNVE+KLR F QKQ
Sbjct: 598 VAELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYQALRGEEEKNVEIKLRTFGPQKQKK 657
Query: 707 VVYILVNACTSRDYKNNVKG 726
+Y++VNAC+SRDY +N+ G
Sbjct: 658 AIYLVVNACSSRDYTDNIVG 677
>gi|1730565|sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A
gi|556667|emb|CAA53165.1| phytochrome A [Petroselinum crispum]
Length = 1129
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/943 (50%), Positives = 635/943 (67%), Gaps = 39/943 (4%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-----ISPPEGVPEEQIT-AYLSKIQRGGLIQPFGC 98
DA + A+FE+S G SF+YS SV + + ++T AYL IQ+G LIQP GC
Sbjct: 28 DAKIHADFEES---GNSFDYSSSVRVTSAVGENSSIQSNKLTTAYLHHIQKGKLIQPVGC 84
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LAV+E +F+I+ YSEN EML + S + + + G IG D RT+FT PS A+L KA
Sbjct: 85 LLAVDEKSFKIMAYSENAPEMLTMVSHAVPSVGEHPVLG-IGTDVRTIFTAPSAAALQKA 143
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+I+LLNPILVH + KPFYAI HR+ ++ID EP K + ++ AGA+QS K
Sbjct: 144 VGFTDINLLNPILVHCKTSG--KPFYAIAHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 201
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA A++RLQALPGG + LCDT+V++V +LTGYDRVM Y FHDDDHGEV +E+ + LE
Sbjct: 202 LASKAVNRLQALPGGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVTAEVTKPGLE 261
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY G+H+PA D+PQAARFLF +N+VRMICDC A V+Q ++L L L STLR+PH
Sbjct: 262 PYFGLHYPATDVPQAARFLFLKNKVRMICDCRANSAPVLQDEKLPFELTLCGSTLRAPHS 321
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLR 382
CHLQYM NM SIASLVMAV+IN D S KLWGLVVCH+TSPR++PFPLR
Sbjct: 322 CHLQYMENMNSIASLVMAVVINDSDEVVESSDRNSVKSKKLWGLVVCHNTSPRFVPFPLR 381
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ + EL++ Q+ EKNILRTQ LLCD+L+RDAP IV+QSP++MDLVK
Sbjct: 382 YACEFLAQVFAIHVSKELELENQIVEKNILRTQTLLCDLLMRDAPLGIVSQSPNMMDLVK 441
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + + +G TP++ QL+DI WL H D TGLSTDSL +AGYPGA LG
Sbjct: 442 CDGAALLYKNKVYRLGATPSDYQLRDIVSWLTEYHTDSTGLSTDSLYDAGYPGALALGDV 501
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA +ITS D LFWFRSH A ++WGGAK P+ +G KMHPRSSFKAFLEVVK R
Sbjct: 502 VCGMAVVKITSHDMLFWFRSHAAGHIRWGGAKAEPDENHDGRKMHPRSSFKAFLEVVKTR 561
Query: 563 SFPWEVSEINAIHSLQIVMRD--SFQEMEEENDSKVQGN-----TQQNGSKMQGVDELSS 615
S W+ E++AIHSLQ+++R S ++ +++ N T+ N K++G+ EL +
Sbjct: 562 STTWKEFEMDAIHSLQLILRKALSVEKAVAAQGDEIRSNTDVIHTKLNDLKIEGIQELEA 621
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PIF VD+ +NGWN K+AELTGLP +AMGK L+ +V + S G
Sbjct: 622 VTSEMVRLIETATVPIFAVDADEIVNGWNTKIAELTGLPVDQAMGKHLL-TLVEDSSVGT 680
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V L+ AL G+E++ + + + + ++ + ++VNAC +R +NV GVCFV QD+T
Sbjct: 681 VVFLLALALQGKEEQGIPFEFKTYGSREDSVPITVVVNACATRGLHDNVVGVCFVAQDVT 740
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K +MDKF R+QGDY+AI+Q+ NPLIPPIF +DE CSEWN AM +++GW R +V+ K
Sbjct: 741 SQKTIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMTELSGWRREDVMNK 800
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML EIFG + C +K ++ ++L +TGQ +E F FF G++VE L AS
Sbjct: 801 MLLGEIFGIQTSCCHLKSKEAFVNLGVVLNNALTGQISEKICFSFFATDGKYVECLLCAS 860
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
++ EG V G FCF+Q+ +LQ AL Q L + ++K L+Y+R++ KNPL GI F
Sbjct: 861 KKLHGEGTVTGIFCFLQLASQELQQALHIQRLTEQTAMKRLKTLSYLRRQAKNPLCGINF 920
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
V + LE + E Q + TS C+R + I+D DL I +G
Sbjct: 921 VREKLEEIGMGEEQTKLFRTSVHCQRHVNKILDDTDLDSIIDG 963
>gi|406685575|gb|AFS51228.1| phytochrome P, partial [Podocarpus longifoliolatus]
Length = 660
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/663 (70%), Positives = 540/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NP+ VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIG+LCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGMLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ + +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSS-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|38037178|gb|AAR08425.1| phytochrome A [Cuscuta pentagona]
Length = 1119
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/945 (51%), Positives = 648/945 (68%), Gaps = 40/945 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVP--EEQITAYLSKIQRGG 91
II + DA L AEFE+S G SF+YS S+ ++ E P ++ TAYL +IQ+
Sbjct: 22 IIAQTSIDAKLHAEFEES---GDSFDYSSSIRVTSVNTGEQKPRSDKVTTAYLHQIQKAK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
IQPFGC+LA++E TFR+I +SEN +ML + S + D + G IG D RT+FT PS
Sbjct: 79 FIQPFGCLLALDEKTFRVIAFSENAPDMLTMVSHAVPSVGDLPVLG-IGTDIRTIFTAPS 137
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
GA+L KA E+SLLNPILVH + KPFYAI+HR+ +++D EP K + ++ A
Sbjct: 138 GAALQKALGFGEVSLLNPILVHCKTSG--KPFYAIVHRVTGSLIVDFEPVKPYEAPMTAA 195
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AI+RLQ+LP G + CDT+V++V +LTGYDRVM Y FHDDDHGEVVSE
Sbjct: 196 GALQSYKLAAKAIARLQSLPSGSLERFCDTIVQEVFELTGYDRVMAYKFHDDDHGEVVSE 255
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A V V+Q ++L L L S
Sbjct: 256 ITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCQAKHVKVVQDEKLLFDLTLCGS 315
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSM------------KLWGLVVCHHTSPR 375
TLR+PH CHLQYM NM SIASLVMA+++N D +LWGLVVCH+T+PR
Sbjct: 316 TLRAPHTCHLQYMENMNSIASLVMAIVVNDGDDEEEEERSGSGKRKRLWGLVVCHNTTPR 375
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIV--TQ 433
++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCD+LLRDA IV +Q
Sbjct: 376 FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDILLRDAVLGIVSQSQ 435
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
SP++MDLVKCDGA L Y + +G+TPT+ QL+DI + L +H D TGLSTDSL +AG+
Sbjct: 436 SPNMMDLVKCDGAVLLYKSKIHRLGITPTDFQLQDIVYRLNEHHMDSTGLSTDSLYDAGF 495
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA LG +CGMA+ RI+ KD+LFWFRSHTA EV+WGG KH P D+G KMHPRSSFK
Sbjct: 496 PGALSLG--LCGMASVRISEKDWLFWFRSHTASEVRWGGVKHEP---DDGRKMHPRSSFK 550
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVV+ RS PW+ E++ IHSLQ++MR++F + + V + + N ++ G+ EL
Sbjct: 551 AFLEVVETRSLPWKDYEMDGIHSLQLIMRNAFFNEADTVATNVI-HAKLNDLRIDGLQEL 609
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V EMVRLIETA PI V G +NGWN K+AELTGL EA+G L+ +V + S
Sbjct: 610 EAVTSEMVRLIETAMVPIIAVGVDGLVNGWNTKIAELTGLSVDEAIGNHLL-TLVEDSSV 668
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ AL GEE+KNV+ ++ ++ + + ++VNAC SRD + +V GVCF+ QD
Sbjct: 669 HTVKKMLNLALQGEEEKNVQFEIMTHGIRSECGPISLVVNACASRDVQESVVGVCFIAQD 728
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
IT +K +MDKF R++GDY AIIQ+ NPLIPPIF +DE CSEWN+AM K++GW R EVI
Sbjct: 729 ITGQKTVMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEWNSAMTKLSGWRRDEVI 788
Query: 794 GKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KM+ E+FG CR+K + ++L ITG ++ FGF R G++VE L+
Sbjct: 789 DKMVLGEVFGTQKACCRLKSHEAFVTLGVVLNNAITGHESDKTVFGFCTRNGKYVECLLS 848
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
++R + +G VIG FCF+Q+ +LQ AL Q L + ++K LAY+R++VKNPL+GI
Sbjct: 849 VTKRLNQDGAVIGLFCFLQLASQELQQALHFQKLSEQTATKRLKVLAYLRKQVKNPLSGI 908
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F K+LE + + +Q+ L TS C++Q+ ++D DL CI EG
Sbjct: 909 MFSRKMLEGTELGNDQQNILHTSAQCQQQLSKVLDDTDLDCIIEG 953
>gi|343408423|gb|AEM06737.1| phytochrome C [Arabidopsis thaliana]
gi|343408443|gb|AEM06747.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/932 (51%), Positives = 645/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTDQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|108802823|gb|ABG21362.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/932 (51%), Positives = 645/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|343408411|gb|AEM06731.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/932 (51%), Positives = 645/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|218683855|gb|ACL00882.1| phytochrome B [Brassica oleracea]
Length = 653
Score = 964 bits (2492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/653 (68%), Positives = 535/653 (81%), Gaps = 13/653 (1%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+VIDLEP++S DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGVVIDLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E RR DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESRREDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGSEED 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
+ SM+LWGLVVCHHTS R IPFP RYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GSSVAGGRSSMRLWGLVVCHHTSSRCIPFPSRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G + +GV PTE+Q KD+
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGNYYPLGVAPTEAQTKDVV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 591 ENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
+SK Q S QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+A
Sbjct: 421 AMNSKTADGAVQPYSMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIA 480
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
EL+GL EAMGKSL+ +++++E++ V+ LI RAL G+ED+NVE+KL+ F + Q V
Sbjct: 481 ELSGLSVEEAMGKSLVSDLIYKENEETVDKLISRALRGDEDRNVEIKLKTFSPELQGKAV 540
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+
Sbjct: 541 FVVVNACSSKDYSNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAA 600
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
DEN CC EWN A+EK+TGW R EVIGKML E+FG++CR+KG D LTKFMI+L
Sbjct: 601 DENTCCLEWNTALEKLTGWSRSEVIGKMLVGEVFGSYCRLKGPDALTKFMIVL 653
>gi|108802807|gb|ABG21354.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 964 bits (2492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/932 (51%), Positives = 644/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALEKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
I+ KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKTLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
+GDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 KGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ E FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|108802793|gb|ABG21347.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802795|gb|ABG21348.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802799|gb|ABG21350.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802803|gb|ABG21352.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802805|gb|ABG21353.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 964 bits (2492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/932 (51%), Positives = 644/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALEKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
I+ KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKTLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
+GDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 KGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ E FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|218683879|gb|ACL00894.1| phytochrome B [Lepidium alyssoides]
Length = 654
Score = 964 bits (2492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/654 (69%), Positives = 535/654 (81%), Gaps = 14/654 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFL KQNR+RM
Sbjct: 61 VRNLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLIKQNRIRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGIEED 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
K+SM+LWGLVVCHHTSPR IPFPLRYACEFL+QAF LQL MELQ+A+Q+AEK
Sbjct: 181 GGNVAGGKNSMRLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLALQMAEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y GR + +GV PTE Q+KDI
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGRYYPLGVAPTEVQIKDIV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFW RSHTAKE+KW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITERDFLFWLRSHTAKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKDSEA 420
Query: 591 ENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+SK Q M QGVDEL +VA EMVRLIETAT PIF VD+ G INGWNAK+
Sbjct: 421 AINSKTADGAVQPFRDMTGEQGVDELGAVAREMVRLIETATVPIFAVDAGGYINGWNAKI 480
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGL EAMGKSL+ ++++++++ V+ LI RAL GEEDKNVE+KL+ F + Q
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKQNEETVDKLISRALRGEEDKNVEVKLKTFSPELQGRA 540
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
V+++VNAC+S+DY NN+ GVCFVGQDIT +K+++DKFI +QGDY+AI+ S NPLIPPIFA
Sbjct: 541 VFVVVNACSSKDYLNNIVGVCFVGQDITGQKIVVDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
+DEN CC EWN AMEK++GW R EVIGKML E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 ADENTCCLEWNTAMEKLSGWSRSEVIGKMLVGEVFGSSCRLKGPDALTKFMIVL 654
>gi|406685475|gb|AFS51178.1| phytochrome P, partial [Araucaria montana]
Length = 677
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/680 (69%), Positives = 543/680 (79%), Gaps = 38/680 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYLS++QRGG IQPFGCMLAVEE TF II YSEN +EMLDL R E +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D RTLFT S +L KAA + EISL+NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+V+DLEP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 --------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQL 406
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL
Sbjct: 299 GGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQL 358
Query: 407 AEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQL 466
EK+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+
Sbjct: 359 TEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQI 418
Query: 467 KDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAK 526
KDIA WLL H D TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAK
Sbjct: 419 KDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAK 478
Query: 527 EVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ 586
E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ
Sbjct: 479 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQ 538
Query: 587 EMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
++++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAK
Sbjct: 539 DIDDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAK 597
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
VAELTGLP EAMGKSL+ +++ EES V+ ++ AL GEE+KNVE+KLR F QKQ
Sbjct: 598 VAELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKK 657
Query: 707 VVYILVNACTSRDYKNNVKG 726
+Y++VNAC+SRDY +N+ G
Sbjct: 658 AIYLVVNACSSRDYTDNIVG 677
>gi|406685521|gb|AFS51201.1| phytochrome P, partial [Lepidothamnus fonkii]
Length = 661
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/664 (70%), Positives = 541/664 (81%), Gaps = 22/664 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNG----- 133
AYLS++QRGG IQPFGCMLAVE+ F+II YSEN LEMLD+ +S D +G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEDTNFKIIAYSENALEMLDIMPQSVPNMDLGKSGGGGAV 60
Query: 134 -LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVI 192
IG D RTLFTP S +L KA+ ++EISL+NPI +HS KPFYAI+H IDVGIVI
Sbjct: 61 LTIGADVRTLFTPASARALEKASMAQEISLMNPIWMHSQYTG--KPFYAIVHGIDVGIVI 118
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
DLEP+K+GD A+S AGAVQSQKL+V A SRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM
Sbjct: 119 DLEPAKTGDAAMSAAGAVQSQKLSVRASSRLQSLPAGDIGLLCDTVVEDVRELTGYDRVM 178
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV V
Sbjct: 179 VYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 238
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMK 362
IQS+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMK
Sbjct: 239 IQSQELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMK 298
Query: 363 LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDML 422
LWGLVVCHHTSPR +PFPLRY CEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDML
Sbjct: 299 LWGLVVCHHTSPRAVPFPLRYGCEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDML 358
Query: 423 LRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTG 482
LRDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TG
Sbjct: 359 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTG 418
Query: 483 LSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDN 542
LSTDSLA+AGYPGAA LG AVCGMA ARITS DFLFWFRSHTAKE+KWGGAKHHP+ KD+
Sbjct: 419 LSTDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPDDKDD 478
Query: 543 GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQ 602
+MHPRSSFKAFLEVVK RS P E E++AIHSLQ+++R SFQ++E+ N +K + +
Sbjct: 479 VRRMHPRSSFKAFLEVVKRRSLPRENVEMDAIHSLQLILRGSFQDIEDSN-TKTMVHARL 537
Query: 603 NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKS 662
N K+QG+DELSSVA EMVRLIETATAPI VDS G +NGWNAKVAELTGLP EAMGKS
Sbjct: 538 NDLKLQGIDELSSVATEMVRLIETATAPILAVDSEGLVNGWNAKVAELTGLPVGEAMGKS 597
Query: 663 LIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKN 722
L+ ++V EES VE ++ RA+ GEE+KN+E+KLR F QKQ V+Y++VNAC+SRDY +
Sbjct: 598 LVHDLVCEESAECVEKMLNRAVRGEEEKNIEIKLRTFGPQKQKEVIYLVVNACSSRDYTD 657
Query: 723 NVKG 726
N+ G
Sbjct: 658 NIVG 661
>gi|406685595|gb|AFS51238.1| phytochrome P, partial [Podocarpus rubens]
Length = 660
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/663 (70%), Positives = 539/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGY+RVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|37623877|gb|AAQ95581.1| phytochrome c [Arabidopsis thaliana]
Length = 1111
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/932 (51%), Positives = 645/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|343408413|gb|AEM06732.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/932 (51%), Positives = 645/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS SV ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASVNLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPIDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|406685641|gb|AFS51261.1| phytochrome P, partial [Larix laricina]
Length = 655
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/660 (71%), Positives = 549/660 (83%), Gaps = 20/660 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG +QPFGC+LAVEE TFRII YSEN +EMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRMQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P K+GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGY+RVM+Y
Sbjct: 118 PLKTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGS+ASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PMGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL+ +
Sbjct: 537 LQGMDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V E+S VE ++ AL GEE+KNVE+ LR F QKQ + V+++VNAC+SRD+ +N+ G
Sbjct: 597 LVFEQSVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQEA-VFLVVNACSSRDFTDNIVG 655
>gi|406685545|gb|AFS51213.1| phytochrome P, partial [Podocarpus lawrencei]
Length = 660
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFT S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTASSARALEKAATAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIP+A+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES +E ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECLEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685663|gb|AFS51272.1| phytochrome P, partial [Tsuga diversifolia]
Length = 656
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/660 (71%), Positives = 543/660 (82%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT PS SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAPSAHSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P ++GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HG VV+EIRRSDLEPYLG+H+PA DIPQA RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGVVVAEIRRSDLEPYLGLHYPATDIPQAFRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGS+ASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+A ITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++ + +K + + N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDINDSG-TKTMVHARLNDMR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES VE ++ AL GEE+KNVE+ LR F QKQ V+++VNAC+SRD+ +N+ G
Sbjct: 597 LVFEESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|227452669|dbj|BAH57345.1| phytochrome A [Glycine max]
Length = 1094
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/923 (50%), Positives = 636/923 (68%), Gaps = 33/923 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSVISPPEGVP-------EEQITAYLSKIQRGGLIQPFG 97
DA L A FE+S +S + R +SP V + ++YL + Q+ LIQPFG
Sbjct: 33 DAKLHATFEESGSSFDYSSSVR--MSPAGTVSGDHQPRSDRATSSYLHQTQKIKLIQPFG 90
Query: 98 CMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAK 153
C+LA++E T ++I YSEN EML + S + D G IG D RT+FT PS A++ K
Sbjct: 91 CLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIRTIFTAPSSAAIQK 149
Query: 154 AAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQ 213
A ++SL NPILVH + KPFYAI+HR+ ++ID EP K + ++ +GA+QS
Sbjct: 150 ALRFGDVSLHNPILVHCKTSG--KPFYAIIHRVTGSVIIDFEPVKPHEVPMTASGALQSY 207
Query: 214 KLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDL 273
KLA AI+RL++L G++ LC+T+V +V +LTGYDRVM Y FH+DDHGEV++E++R L
Sbjct: 208 KLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVIAEVKRPGL 267
Query: 274 EPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPH 333
EPYLG+H+PA DIPQA RFLF +N+VRMI DC A V V+Q K++ L L STLR+ H
Sbjct: 268 EPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLCGSTLRAAH 327
Query: 334 GCHLQYMTNMGSIASLVMAVIINSKD-------------SMKLWGLVVCHHTSPRYIPFP 380
CHLQYM NM S ASLVMAV++N D S +LWGLVVCHHT+PR++PFP
Sbjct: 328 SCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHTTPRFVPFP 387
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYAC+FL Q F++ + EL++ Q+ EKNIL+TQ LLCDML++ P IV+QSP+IMDL
Sbjct: 388 LRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVSQSPNIMDL 447
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAAL Y + W +GVTP+ESQ+K+IA WL H D TG TDSL++AG+PGAA LG
Sbjct: 448 VKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAGFPGAAALG 507
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
CGMA ARI SKD LFWFRSHTA E++WGGAKH P +D+G ++HPRSSFKAFLEVVK
Sbjct: 508 DIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSFKAFLEVVK 567
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E +AIHSLQ+++RD+F+E + S +T+ K++G+ EL +V E+
Sbjct: 568 TRSLPWKTYETDAIHSLQLILRDAFKETQSMEISTYAIDTRLGDLKIEGMQELDAVTSEV 627
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VRLIETAT PI VD +G INGWN K+AELTGLP EA+GK L+ +V + S V+ ++
Sbjct: 628 VRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLL-TLVEDFSVDRVKKML 686
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVL 740
AL GEE++NV+ +++ ++ + ++VNAC SRD ++NV GVCF+ QDIT +K +
Sbjct: 687 DMALQGEEERNVQFEIQTHHMKIDSGPISLVVNACASRDLQDNVVGVCFLAQDITAQKTM 746
Query: 741 MDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPRE 800
MDKF R++GDY+AI+Q+ NPLIPPIF +DE C EWN+AM K+TGW R EV+ KML E
Sbjct: 747 MDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNSAMAKLTGWKREEVMDKMLLGE 806
Query: 801 IFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
+FG CR++ + + F I+L + G TE PFGFF R G+ VE L+ +++ DA
Sbjct: 807 VFGTQIACCRLRNHEAVVNFSIVLNTAMAGLETEKVPFGFFARDGKHVECILSMTKKLDA 866
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
EG V G FCF+Q+ +LQ AL Q + + ++K+L Y++++++NPL GI F KLL
Sbjct: 867 EGVVTGVFCFLQLASAELQQALHIQRISEQTSLKRLKDLTYLKRQIQNPLYGIMFSRKLL 926
Query: 918 ESSSISENQRQYLETSDACERQI 940
E + + Q+Q+L+T C+RQI
Sbjct: 927 EGTELGAEQKQFLQTGIRCQRQI 949
>gi|406685549|gb|AFS51215.1| phytochrome P, partial [Podocarpus aristulatus]
gi|406685591|gb|AFS51236.1| phytochrome P, partial [Podocarpus purdieanus]
Length = 660
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/663 (70%), Positives = 537/663 (80%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEAL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+V+D
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVVD 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSR-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EE VE ++ RAL GEE+KNVE+KLR F KQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTVKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|297801114|ref|XP_002868441.1| hypothetical protein ARALYDRAFT_493637 [Arabidopsis lyrata subsp.
lyrata]
gi|297314277|gb|EFH44700.1| hypothetical protein ARALYDRAFT_493637 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/934 (51%), Positives = 648/934 (69%), Gaps = 35/934 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGCM 99
DA L FE+S + F+YS S+ ++ P E ++ YL KIQRG LIQPFGC+
Sbjct: 26 DAKLHTNFEES---ERLFDYSASINLNMPSSSSCEIPSSAVSTYLQKIQRGMLIQPFGCL 82
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAA 155
+ V+E ++I +SEN EML L + E E IG D ++LF P ++L KA
Sbjct: 83 IVVDEKNLKVIAFSENTQEMLGLTPHTVPSMEQREALS-IGTDVKSLFQSPGCSALQKAV 141
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KL
Sbjct: 142 DFGEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKL 199
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
A +ISRLQALPGG++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R DLEP
Sbjct: 200 AAISISRLQALPGGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDLEP 259
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
YLG+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGC
Sbjct: 260 YLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGC 319
Query: 336 HLQYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYAC 385
H QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYAC
Sbjct: 320 HAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFLPFPLRYAC 379
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDG
Sbjct: 380 EFLTQVFGVQVNKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDG 439
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CG
Sbjct: 440 AALYYREKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICG 499
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA IT KDFLFWFRS TAK+++WGGA+H P +D G +MHPRSSFKAF+E+V+ +S P
Sbjct: 500 MAAVYITDKDFLFWFRSGTAKQIQWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSMP 558
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
W+ E++AI+SLQ++++ S Q + SK N +++Q VDEL + EMVRLI+
Sbjct: 559 WDDMEMDAINSLQLIIKGSLQ----DEHSKTVVNVPFVDNRVQKVDELCVIVNEMVRLID 614
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TA PIF VD+SG INGWN+K AE++GL +A+GK + D +V ++S V+N++ AL
Sbjct: 615 TAAVPIFAVDASGVINGWNSKAAEVSGLAIEQAIGKPVSD-LVEDDSAETVKNMLALALE 673
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
G E++ +++R F +++ S + ++VN C SRD NNV GVCF+GQD+T +K L++ +
Sbjct: 674 GSEERGAAIRIRAFGPKRKSSPIELVVNTCCSRDRTNNVLGVCFIGQDVTGQKTLIENYS 733
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN- 804
R+QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K++ E+F +
Sbjct: 734 RVQGDYARIMWSPSTLIPPIFMTNENGLCSEWNNAMQKLSGIKREEVVNKLILGEVFTSD 793
Query: 805 --FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKV 861
CR+K D LTK I I+GQ E FGF++R G F+E L+A++RTD EGKV
Sbjct: 794 DYGCRLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALLSANKRTDIEGKV 853
Query: 862 IGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSS 921
G CF+Q+ P+LQ AL+ Q + + I +LAY+RQEVKNP I F+ LL SS
Sbjct: 854 TGVLCFLQVPSPELQYALQVQQVSEQVIACAFNKLAYLRQEVKNPEQAISFLQDLLHSSG 913
Query: 922 ISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+SE+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 914 LSEDQKKLLRTSVLCREQLAKVIRDSDIDGIEEG 947
>gi|406685617|gb|AFS51249.1| phytochrome P, partial [Retrophyllum comptonii]
Length = 661
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/664 (70%), Positives = 537/664 (80%), Gaps = 21/664 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+L VEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP DIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTCDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FP+RYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPMRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W + VTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLAVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGATTLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKGV 727
+ GV
Sbjct: 658 IVGV 661
>gi|15239211|ref|NP_198433.1| phytochrome C [Arabidopsis thaliana]
gi|130192|sp|P14714.1|PHYC_ARATH RecName: Full=Phytochrome C
gi|16425|emb|CAA35223.1| unnamed protein product [Arabidopsis thaliana]
gi|10176703|dbj|BAB09925.1| phytochrome C [Arabidopsis thaliana]
gi|332006638|gb|AED94021.1| phytochrome C [Arabidopsis thaliana]
gi|343408415|gb|AEM06733.1| phytochrome C [Arabidopsis thaliana]
gi|343408427|gb|AEM06739.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/932 (51%), Positives = 644/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALEKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
I+ KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKTLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
+GDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 KGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ E FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|406685603|gb|AFS51242.1| phytochrome P, partial [Podocarpus spathoides]
Length = 660
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS+++RGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMRRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 SIGTDVRTLFTPSSARALEKAVMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKELKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|108802819|gb|ABG21360.1| PHYTOCHROME C [Arabidopsis lyrata]
Length = 1055
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/934 (51%), Positives = 648/934 (69%), Gaps = 35/934 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGCM 99
DA L FE+S + F+YS S+ ++ P E ++ YL KIQRG LIQPFGC+
Sbjct: 26 DAKLHTNFEES---ERLFDYSASINLNMPSSSSCEIPSSAVSTYLQKIQRGMLIQPFGCL 82
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAA 155
+ V+E ++I +SEN EML L + E E IG D ++LF P ++L KA
Sbjct: 83 IVVDEKNLKVIAFSENTQEMLGLTPHTVPSMEQREALS-IGTDVKSLFQSPGCSALQKAV 141
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KL
Sbjct: 142 DFGEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKL 199
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
A +ISRLQALPGG++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R DLEP
Sbjct: 200 AAISISRLQALPGGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDLEP 259
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
YLG+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGC
Sbjct: 260 YLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGC 319
Query: 336 HLQYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYAC 385
H QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYAC
Sbjct: 320 HAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFLPFPLRYAC 379
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDG
Sbjct: 380 EFLTQVFGVQVNKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDG 439
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CG
Sbjct: 440 AALYYREKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICG 499
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA IT KDFLFWFRS TAK+++WGGA+H P +D G +MHPRSSFKAF+E+V+ +S P
Sbjct: 500 MAAVYITDKDFLFWFRSGTAKQIQWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSMP 558
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
W+ E++AI+SLQ++++ S Q + SK N +++Q VDEL + EMVRLI+
Sbjct: 559 WDDMEMDAINSLQLIIKGSLQ----DEHSKTVVNVPFVDNRVQKVDELCVIVNEMVRLID 614
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TA PIF VD+SG INGWN+K AE++GL +A+GK + D +V ++S V+N++ AL
Sbjct: 615 TAAVPIFAVDASGVINGWNSKAAEVSGLAIEQAIGKPVSD-LVEDDSAETVKNMLALALE 673
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
G E++ +++R F +++ S + ++VN C SRD NNV GVCF+GQD+T +K L++ +
Sbjct: 674 GSEERGAAIRIRAFGPKRKSSPIELVVNTCCSRDRTNNVLGVCFIGQDVTGQKTLIENYS 733
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN- 804
R+QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K++ E+F +
Sbjct: 734 RVQGDYARIMWSPSTLIPPIFMTNENGLCSEWNNAMQKLSGIKREEVVNKLILGEVFTSD 793
Query: 805 --FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKV 861
CR+K D LTK I I+GQ E FGF++R G F+E L+A++RTD EGKV
Sbjct: 794 DYGCRLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALLSANKRTDIEGKV 853
Query: 862 IGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSS 921
G CF+Q+ P+LQ AL+ Q + + I +LAY+RQEVKNP I F+ LL SS
Sbjct: 854 TGVLCFLQVPSPELQYALQVQQVSEQVIACAFNKLAYLRQEVKNPEQAISFLQDLLHSSG 913
Query: 922 ISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+SE+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 914 LSEDQKKLLRTSVLCREQLAKVIRDSDIDGIEEG 947
>gi|406685655|gb|AFS51268.1| phytochrome P, partial [Pseudotsuga menziesii]
Length = 656
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/660 (71%), Positives = 546/660 (82%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASANSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P K+GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLKTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV +IQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKLIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGS+ASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+A ITSK+FLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASAIITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RSFPW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSFKAFLEVVKRRSFPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAM SL+ +
Sbjct: 537 LQGMDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMSMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES VE ++ AL GEE+KNVE+ LR F QKQ V+++VNAC+SRD+ +N+ G
Sbjct: 597 LVFEESVQRVEKMLNNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685497|gb|AFS51189.1| phytochrome P, partial [Afrocarpus usambarensis]
Length = 660
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/663 (70%), Positives = 537/663 (80%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+L VEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLF P S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFKPFSARALEKAAMAPDISLMNPICVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W + VTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685477|gb|AFS51179.1| phytochrome P, partial [Araucaria muelleri]
Length = 677
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/680 (68%), Positives = 542/680 (79%), Gaps = 38/680 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYLS++QRGG IQPFGCMLAVEE TF II YSEN +EMLDL R E +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D RTLFT S +L KAA + EISL+NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+V+DLEP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 --------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQL 406
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL
Sbjct: 299 GGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQL 358
Query: 407 AEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQL 466
EK+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGA LYYGG CW++GVTPTE+Q+
Sbjct: 359 TEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGATLYYGGMCWMLGVTPTEAQI 418
Query: 467 KDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAK 526
KDIA WLL H D TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAK
Sbjct: 419 KDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAK 478
Query: 527 EVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ 586
E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ
Sbjct: 479 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQ 538
Query: 587 EMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
++++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAK
Sbjct: 539 DIDDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAK 597
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
VAELTGLP EAMGKSL+ +++ EES V+ ++ AL GEE+KNVE+KLR F QKQ
Sbjct: 598 VAELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKK 657
Query: 707 VVYILVNACTSRDYKNNVKG 726
+Y++VNAC+SRDY +N+ G
Sbjct: 658 AIYLVVNACSSRDYTDNIVG 677
>gi|406685529|gb|AFS51205.1| phytochrome P, partial [Pherosphaera fitzgeraldii]
Length = 660
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/663 (69%), Positives = 542/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNG----- 133
AYLS++QRGG IQPFGCML VEE F+II YS+N LEMLDL +S D +L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLTVEETNFKIIAYSQNALEMLDLMPQSVPSMDSKLGAGGAVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D R+LFTP S +L KA + +ISL+NPI +HS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRSLFTPSSSRALEKAFMAPDISLMNPIWIHSQYTG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM+NMGSIASL MAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMSNMGSIASLAMAVVINGNDEEGGGTGGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYG W +GVTP+E+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGATTWCLGVTPSEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITS+DFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDSDTKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAM KSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMSKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ ++V EES +VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY +N
Sbjct: 598 VHDLVLEESAESVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|218683873|gb|ACL00891.1| phytochrome B [Cochlearia acaulis]
Length = 651
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/651 (68%), Positives = 536/651 (82%), Gaps = 11/651 (1%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDT+VE
Sbjct: 1 ILHRIDVGVVIDLEPARTDDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTIVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E RR DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESRRQDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN+
Sbjct: 121 IVDCHATPVLVVQDDRLAQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINANEDD 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
++SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GSNVPGGRNSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+ESQ+KD+
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSESQIKDVV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 301 EWLLENHADSTGLSTDSLGDAGYPGAASLGDAVCGMAVACITKRDFLFWFRSHTAKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 591 ENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAEL 650
++ + QG+DEL +VA EMVRLIETAT PIF VDS G INGWNAK+AEL
Sbjct: 421 AAADGAVQPCNKDMAGEQGIDELGAVAREMVRLIETATVPIFAVDSGGCINGWNAKIAEL 480
Query: 651 TGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYI 710
TGL EAMGKSLI +++++E+Q V+ LI AL G+EDKNVE+KL+ F + Q V++
Sbjct: 481 TGLSVEEAMGKSLISDLIYKENQETVDKLISSALRGDEDKNVEVKLKTFSSELQGKAVFV 540
Query: 711 LVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDE 770
+VNAC+S+DY NN+ GVCFVGQD+T++K++MDKFI +QGDY+AI+ S NPLIPPIFA+DE
Sbjct: 541 VVNACSSKDYLNNIVGVCFVGQDVTNQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 600
Query: 771 NACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
N CC EWN AMEK+TGW R EVIGKML E+FG+ C++KG D LTKFMI L
Sbjct: 601 NTCCLEWNTAMEKLTGWSRGEVIGKMLVGEVFGSCCKLKGADALTKFMIAL 651
>gi|108802770|gb|ABG21336.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802775|gb|ABG21338.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/932 (51%), Positives = 644/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LT YDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|108802797|gb|ABG21349.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/932 (51%), Positives = 644/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALEKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
I+ KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKTLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
+GDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 KGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|406685649|gb|AFS51265.1| phytochrome P, partial [Pinus strobus]
Length = 656
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/660 (71%), Positives = 546/660 (82%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG+IQPFGC+LAVEE TFRII YSEN +EMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGIIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQSQQEVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RT FT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VIDLE
Sbjct: 61 TDVRTQFTAASSHSLEKAAVTQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDLE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P ++GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVFEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLR A
Sbjct: 298 VVCHHTSPRPVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRHA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG+CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PMGIVTQSPSIMDLVKCDGAALYYGGKCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSKDF+FWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASARITSKDFIFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K ++Q N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSQLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VD +G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDYNGCVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES +VE ++ AL GEE+KNVE+ L+ F QK+ V ++VNAC+SRD+ +N+ G
Sbjct: 597 LVFEESVESVEKMLYNALRGEEEKNVEMMLKTFGPQKEKKAVILVVNACSSRDFTDNIVG 656
>gi|406685569|gb|AFS51225.1| phytochrome P, partial [Podocarpus fasciculus]
Length = 660
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV +I
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE + RAL GEE+KNVE++LR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKTLYRALRGEEEKNVEIRLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685563|gb|AFS51222.1| phytochrome P, partial [Podocarpus dispermus]
Length = 660
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QN VRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNGVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|108802809|gb|ABG21355.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/932 (51%), Positives = 644/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALEKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +++ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVKINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
I+ KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKTLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
+GDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 KGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ E FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|406685547|gb|AFS51214.1| phytochrome P, partial [Podocarpus archboldii]
Length = 660
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGY+RVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
S DSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 SADSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|108802781|gb|ABG21341.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/932 (51%), Positives = 644/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQ FGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQTFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|343408439|gb|AEM06745.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/932 (51%), Positives = 644/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL S +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSFGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|406685565|gb|AFS51223.1| phytochrome P, partial [Podocarpus drouynianus]
Length = 660
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
+ FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 FKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLV CHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVGCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|343408421|gb|AEM06736.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/932 (51%), Positives = 644/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LT YDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHGSPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPKKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|406685577|gb|AFS51229.1| phytochrome P, partial [Podocarpus lucienii]
Length = 660
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV +I
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSK FLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKGFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|576939|emb|CAA83549.1| phyC [Arabidopsis thaliana]
gi|343408441|gb|AEM06746.1| phytochrome C [Arabidopsis thaliana]
gi|385654208|gb|AFI61904.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/932 (51%), Positives = 644/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LT YDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|406685519|gb|AFS51200.1| phytochrome P, partial [Lagarostrobos franklinii]
Length = 643
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/646 (71%), Positives = 536/646 (82%), Gaps = 17/646 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG---LIGI 137
AYLS++QRGG IQPF CMLAVEE F+II YS+N LEMLD+ +S + +L IG
Sbjct: 1 AYLSRMQRGGTIQPFSCMLAVEETNFKIIAYSQNALEMLDIMPQSVPNMDLGKSVLTIGT 60
Query: 138 DARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPS 197
D RTLFTP S +L KAA ++EISL+NPI VHS KPFYAI+HRIDVG+VIDLEP
Sbjct: 61 DVRTLFTPASARALEKAAMAQEISLMNPIWVHSQYTG--KPFYAIVHRIDVGMVIDLEPV 118
Query: 198 KSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFH 257
++GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCD+VVEDV++LTGYDRVM+Y FH
Sbjct: 119 RTGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDSVVEDVRELTGYDRVMVYKFH 178
Query: 258 DDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKE 317
+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS+E
Sbjct: 179 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVIQSEE 238
Query: 318 LKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKLWGLV 367
L+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKLWGLV
Sbjct: 239 LRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGAGTSGRSSMKLWGLV 298
Query: 368 VCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAP 427
VCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAP 358
Query: 428 FSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDS 487
IVTQSPSIMDLVKCDGAALYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPAEAQIKDIADWLLEYHGDSTGLSTDS 418
Query: 488 LAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMH 547
LA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MH
Sbjct: 419 LADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 548 PRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM 607
PRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N +K + + N K+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN-TKTMVHARLNDLKL 537
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL+ ++
Sbjct: 538 QGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHDL 597
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
+ EES +VE ++ +AL GEE+KNVE+KLR F QKQ V+Y++VN
Sbjct: 598 ILEESAESVEKMLYKALRGEEEKNVEIKLRTFGPQKQKEVIYLVVN 643
>gi|218683875|gb|ACL00892.1| phytochrome B [Pachycladon exile]
Length = 654
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/654 (68%), Positives = 533/654 (81%), Gaps = 14/654 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GSNVATGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD+
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHT KE+KW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTGKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 591 ENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+SK Q M QG+DEL +VA EMVRLIETAT PIF VDS G INGWNAK+
Sbjct: 421 AKNSKTVDGAVQPYMDMVGEQGIDELGAVAREMVRLIETATVPIFAVDSGGCINGWNAKI 480
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGL EAMGKSL+ +++++E++ V L+ RAL G+EDKNVE+KL+ F + Q
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKA 540
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
V+++VNAC+S+DY NN+ GVCFVGQD+T +K+LMDKFI +QGDY+AI+ S NPLIPPIFA
Sbjct: 541 VFVVVNACSSKDYLNNIVGVCFVGQDVTGQKILMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
+DEN CC EWN AMEK+ GW R EVIGKML E+FGN CR+KG D LTKFMI+L
Sbjct: 601 ADENTCCLEWNTAMEKLMGWSRSEVIGKMLVGEVFGNCCRLKGPDALTKFMIVL 654
>gi|406685593|gb|AFS51237.1| phytochrome P, partial [Podocarpus ramosii]
Length = 660
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGY+RVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WG VVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGSVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685639|gb|AFS51260.1| phytochrome P, partial [Larix kaempferi]
Length = 655
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/660 (71%), Positives = 547/660 (82%), Gaps = 20/660 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEFLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P K+GD +S AGAVQSQKLAV AISRLQ+ P GDIGLLCDTVVE+V++LTGY+RVM+Y
Sbjct: 118 PLKTGDAFMSAAGAVQSQKLAVRAISRLQSPPCGDIGLLCDTVVENVRELTGYERVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFTQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGS+ASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILR Q LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRIQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PMGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL+ +
Sbjct: 537 LQGMDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES VE ++ AL GEE+KNVE+ LR F QKQ + V+++VNAC+SRD+ +N+ G
Sbjct: 597 LVFEESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQEA-VFLVVNACSSRDFTDNIVG 655
>gi|406685553|gb|AFS51217.1| phytochrome P, partial [Podocarpus brassii]
Length = 660
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGY+RVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+A YPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADASYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESVECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685583|gb|AFS51232.1| phytochrome P, partial [Podocarpus neriifolius]
Length = 660
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/663 (70%), Positives = 538/663 (81%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++G A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGY+RVM+
Sbjct: 119 LEPRRTGGAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685637|gb|AFS51259.1| phytochrome P, partial [Larix gmelinii]
Length = 655
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/660 (71%), Positives = 547/660 (82%), Gaps = 20/660 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEFLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL K A ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASAHSLEKVAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P K+GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGY+RVM+Y
Sbjct: 118 PLKTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGS+ASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PF LRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFSLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PMGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL+ +
Sbjct: 537 LQGMDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES VE ++ AL GEE+KNVE+ LR F QKQ + V+++VNAC+SRD+ +N+ G
Sbjct: 597 LVFEESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQEA-VFLVVNACSSRDFTDNIVG 655
>gi|406685551|gb|AFS51216.1| phytochrome P, partial [Podocarpus bracteatus]
Length = 660
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/663 (70%), Positives = 537/663 (80%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGY+RVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A P VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPAKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +G TPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGATPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685619|gb|AFS51250.1| phytochrome P, partial [Retrophyllum minus]
Length = 660
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/663 (70%), Positives = 536/663 (80%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG I PFGC+L VEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGXIXPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP I+TQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGATTLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+S DY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSXDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|343408433|gb|AEM06742.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/932 (51%), Positives = 644/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS SV ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASVNLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALQKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH S R++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASLRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY + W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
IT KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKKLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
QGDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 QGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ + FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>gi|406685653|gb|AFS51267.1| phytochrome P, partial [Pseudolarix amabilis]
Length = 656
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/660 (71%), Positives = 544/660 (82%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEEITFRIIAYSENAVEMLDLAPQSVPSMEQPQPETLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA ++EISLLNPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASAHSLEKAALAQEISLLNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P ++GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM+NMGS+ASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMSNMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTP E+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPAEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAATLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SF+++++ +K + + N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDIDDSG-TKTMVHARLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VD +G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDPNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES VE ++ AL GEE+KNVE+ LR F QKQ V+++VNAC+SRD +N+ G
Sbjct: 597 LVFEESVERVEKMLYDALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDVTDNIVG 656
>gi|406685457|gb|AFS51169.1| phytochrome P, partial [Araucaria bernieri]
Length = 675
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/678 (69%), Positives = 542/678 (79%), Gaps = 36/678 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYLS++QRGG IQPFGCMLAVEE TF II YSEN +EMLDL R E +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D RTLFT S +L KAA + EISL+NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+V+DLEP ++G D ALS AGAVQSQKLAV AIS LQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISGLQSLPAGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 ------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 299 GGGGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 358
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KD
Sbjct: 359 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 418
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
IA WLL H D TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+
Sbjct: 419 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 478
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++
Sbjct: 479 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 538
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVA
Sbjct: 539 DDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVA 597
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGLP EAMGKSL+ +++ EES ++ ++ AL GEE+KNVE+KLR F QKQ +
Sbjct: 598 ELTGLPVGEAMGKSLVHDLIFEESANTLDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAI 657
Query: 709 YILVNACTSRDYKNNVKG 726
Y++VNAC+SRDY +N+ G
Sbjct: 658 YLVVNACSSRDYTDNIVG 675
>gi|406685531|gb|AFS51206.1| phytochrome P, partial [Nageia formosensis]
Length = 660
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/663 (70%), Positives = 537/663 (80%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
+G D RTLFTP S +L KAA + +ISL+NPI V+S KPF AI+HRIDVG+VID
Sbjct: 61 TLGTDVRTLFTPSSARALEKAAMAPDISLMNPICVYSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGSHYPATDIPQASRFLFMQNRVRMICDCSATPVTVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDI WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIVEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSSPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKYQGIDELSSVATEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV E+S VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEDSAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685493|gb|AFS51187.1| phytochrome P, partial [Afrocarpus gracilior]
Length = 660
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/663 (70%), Positives = 536/663 (80%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+L VEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D R LF P S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRILFKPFSARALEKAAMAPDISLMNPICVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W + VTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685571|gb|AFS51226.1| phytochrome P, partial [Podocarpus guatemalensis]
Length = 660
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/663 (70%), Positives = 536/663 (80%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEML L +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLGLMPQSVPTMELGKHGGGEAL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+V+
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVVG 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSR-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EE VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685527|gb|AFS51204.1| phytochrome P, partial [Microcachrys tetragona]
Length = 657
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/660 (70%), Positives = 540/660 (81%), Gaps = 18/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNG-----LIG 136
AYLS++QRGG IQPFGCMLAVEE F+II +S+N LEMLDL +S G IG
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPTMEVGKGAVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEP 196
D RTLFTP S +L KAA + +ISL+NPI VHS + KPF AI+HRIDVGIVIDLEP
Sbjct: 61 TDVRTLFTPSSARALEKAAMAPDISLMNPIWVHS--QYTRKPFNAIVHRIDVGIVIDLEP 118
Query: 197 SKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNF 256
++GD A+S AGAVQSQKLAV AISR Q+LP GD+GLLCDTVVEDV++LTGYDRVM+Y F
Sbjct: 119 LRTGDAAMSTAGAVQSQKLAVRAISRPQSLPSGDVGLLCDTVVEDVRELTGYDRVMVYKF 178
Query: 257 HDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSK 316
H+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMI DC A PV VIQS+
Sbjct: 179 HEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMIYDCTATPVNVIQSE 238
Query: 317 ELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKLWGL 366
EL+QPLCLV STLR+PH CH QYM NMGSIASLVMAVIIN D SMKLWGL
Sbjct: 239 ELRQPLCLVGSTLRAPHRCHAQYMANMGSIASLVMAVIINGNDDEGGGTSGRSSMKLWGL 298
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A Q EK+ILRTQ LLCDMLLRDA
Sbjct: 299 VVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQWTEKHILRTQTLLCDMLLRDA 358
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 359 PIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLQHHGDSTGLSTD 418
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA ARITS+DFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 419 SLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 478
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ + +K + + N K
Sbjct: 479 HPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSH-TKTMVHARLNDLK 537
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL+
Sbjct: 538 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHY 597
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES +VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY +N+ G
Sbjct: 598 LVFEESAESVEKMLDRALRGEEEKNVEIKLRTFGSQKQKEAIYLVVNACSSRDYTDNIVG 657
>gi|406685633|gb|AFS51257.1| phytochrome P, partial [Cedrus libani]
Length = 656
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/660 (71%), Positives = 546/660 (82%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL S+S E + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLVSQSVPSMEQPQSEVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLF S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFIAASAHSLEKAAMAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P K+GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLKTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCIAPPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGS+ASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +H D TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTETQIKDIADWLLEHHCDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ + +K + + N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSS-TKTMVHARLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES V+ ++ A+ GEE+KNVE+ LR F QKQ V+++VNAC+SRD+ +N+ G
Sbjct: 597 LVLEESVERVDKMLDNAIRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685467|gb|AFS51174.1| phytochrome P, partial [Araucaria humboldtensis]
Length = 677
Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/680 (68%), Positives = 540/680 (79%), Gaps = 38/680 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYLS++QRGG IQPFGCMLAVEE TF II YSEN +EMLDL R E +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D RTLFT S +L KAA + EISL+NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+V+DLEP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 --------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQL 406
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL
Sbjct: 299 GGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQL 358
Query: 407 AEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQL 466
EK+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+
Sbjct: 359 TEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQI 418
Query: 467 KDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAK 526
KDIA WLL H D TGL TDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAK
Sbjct: 419 KDIADWLLEYHVDSTGLGTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAK 478
Query: 527 EVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ 586
E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ
Sbjct: 479 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQ 538
Query: 587 EMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
++++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAK
Sbjct: 539 DIDDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAK 597
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
VAELTGLP EAMGKSL+ +++ EES V+ ++ AL GEE+KNVE+KLR F QKQ
Sbjct: 598 VAELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKK 657
Query: 707 VVYILVNACTSRDYKNNVKG 726
+Y++VNAC SRDY N+ G
Sbjct: 658 AIYLVVNACFSRDYTENIVG 677
>gi|406685667|gb|AFS51274.1| phytochrome P, partial [Tsuga sieboldii]
Length = 656
Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/660 (71%), Positives = 544/660 (82%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL +AA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID+E
Sbjct: 61 TDVRTLFTAASAHSLERAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDIE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P ++GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGS+ASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYA EFL+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYAREFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+A ITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++ + +K + + N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDINDSG-TKTMVHARLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPIXAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES VE ++ AL GEE+KNVE+ LR F QKQ V+++VNAC+SRD+ +N+ G
Sbjct: 597 LVFEESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685665|gb|AFS51273.1| phytochrome P, partial [Tsuga heterophylla]
Length = 656
Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/660 (71%), Positives = 543/660 (82%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASAHSLEKAAMAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P ++GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++L GYDRVM+Y
Sbjct: 118 PLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELAGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEAGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GV PTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVAPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSK+FLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASARITSKNFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK S PW+ EI+AIHSLQ+++R SFQ++++ +K + + N +
Sbjct: 478 HPRSSFKAFLEVVKRGSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHARLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES VE ++ AL GEE+KNVE+ LR F QKQ V+++VNAC+SRD+ +N+ G
Sbjct: 597 LVFEESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685495|gb|AFS51188.1| phytochrome P, partial [Afrocarpus mannii]
Length = 660
Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/663 (70%), Positives = 536/663 (80%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+L VEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLF P S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFKPFSARALEKAAMAPDISLMNPICVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W + VTPTE+Q++DIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIRDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+ RDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSXRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685463|gb|AFS51172.1| phytochrome P, partial [Araucaria columnaris]
Length = 677
Score = 959 bits (2479), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/680 (68%), Positives = 542/680 (79%), Gaps = 38/680 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYLS++QRGG IQPFGCMLAVEE TF II YSEN +EMLDL R E +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D RTLFT S +L +AA + EISL+NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALERAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+V+DLEP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 --------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQL 406
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL
Sbjct: 299 GGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQL 358
Query: 407 AEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQL 466
EK+ILRTQ LLCDMLLRDAP IVT SPSIMD VKCDGAALYYGG CW++GVTPTE+Q+
Sbjct: 359 TEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDPVKCDGAALYYGGMCWMLGVTPTEAQI 418
Query: 467 KDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAK 526
KDIA WLL H D TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAK
Sbjct: 419 KDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAK 478
Query: 527 EVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ 586
E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ
Sbjct: 479 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQ 538
Query: 587 EMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
++++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAK
Sbjct: 539 DIDDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAK 597
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
VAELTGLP EAMGKSL+ +++ EES V+ ++ AL GEE+KNVE+KLR F QKQ
Sbjct: 598 VAELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKK 657
Query: 707 VVYILVNACTSRDYKNNVKG 726
+Y++VNAC+SRDY +N+ G
Sbjct: 658 AIYLVVNACSSRDYTDNIVG 677
>gi|406685453|gb|AFS51167.1| phytochrome P, partial [Araucaria angustifolia]
Length = 675
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/678 (68%), Positives = 545/678 (80%), Gaps = 36/678 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---------EDFELN 132
AYL+++QRGG IQPFGC LAVEE +F I+ YSEN +EMLDL RS E +
Sbjct: 1 AYLTRMQRGGTIQPFGCTLAVEETSFLIVAYSENAVEMLDLSPRSVPNMDMDRDEAMGSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D RTLFTP S +L KAA ++EIS++NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVITIGTDVRTLFTPSSARALEKAAMAQEISMMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+VIDLEP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV V+Q+ +LKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVVQAGQLKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEEEG 298
Query: 361 ------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
MKLWGLVVCHHTS R +PFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 299 GGGGGSGSGRGSMKLWGLVVCHHTSSRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 358
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KD
Sbjct: 359 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 418
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
IA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMATARITSKDFLFWFRSHTAKE+
Sbjct: 419 IADWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEM 478
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++
Sbjct: 479 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 538
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVA
Sbjct: 539 DDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVA 597
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGLP EAMGKSL+ +++ +ES V+ ++ AL GEE+KNVE+KLR F QKQ +
Sbjct: 598 ELTGLPVGEAMGKSLVHDLIFDESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAI 657
Query: 709 YILVNACTSRDYKNNVKG 726
Y++VNAC+SRDY +N+ G
Sbjct: 658 YLVVNACSSRDYTDNIVG 675
>gi|406685481|gb|AFS51181.1| phytochrome P, partial [Araucaria schmidii]
Length = 677
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/680 (68%), Positives = 541/680 (79%), Gaps = 38/680 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYLS++QRGG IQPFGCMLAVEE TF II YSEN +EMLDL R E +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D RTLFT S +L KAA + EISL+NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+V+DLEP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 --------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQL 406
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL
Sbjct: 299 GGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQL 358
Query: 407 AEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQL 466
EK+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+
Sbjct: 359 TEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQI 418
Query: 467 KDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAK 526
KDIA WLL H D TGLSTDSLA+AGYP AA LG AVCGMA ARITSKDFLFWFRSHTAK
Sbjct: 419 KDIADWLLEYHVDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITSKDFLFWFRSHTAK 478
Query: 527 EVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ 586
E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ
Sbjct: 479 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQ 538
Query: 587 EMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
++++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAK
Sbjct: 539 DIDDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAK 597
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
VAELTGLP EAMGKSL+ +++ EES ++ ++ AL GEE+KNVE+ LR F QKQ
Sbjct: 598 VAELTGLPVGEAMGKSLVHDLIFEESANTLDKMLYHALRGEEEKNVEINLRTFGPQKQKK 657
Query: 707 VVYILVNACTSRDYKNNVKG 726
+Y++VNAC+SRDY +N+ G
Sbjct: 658 AIYLVVNACSSRDYTDNIVG 677
>gi|406685587|gb|AFS51234.1| phytochrome P, partial [Podocarpus oleifolius]
Length = 660
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/663 (70%), Positives = 537/663 (80%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFL QNRVRMICDC A PV +I
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLSMQNRVRMICDCSATPVKMI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGDDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+M PRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMRPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685621|gb|AFS51251.1| phytochrome P, partial [Saxegothaea conspicua]
Length = 661
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/664 (69%), Positives = 539/664 (81%), Gaps = 22/664 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGCMLAVEE FRII YSEN LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFRIIAYSENALEMLDLMPQSVPTMELGRHGGGAVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLF P S ++ KAA + +I+L+NPI VHS KPFYAI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFIPSSARAIEKAAMAPDINLMNPIWVHSQYTG--KPFYAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD ++S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPVRTGDASMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+P+ DIPQA+RFLF QNRVRMICDC PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPSTDIPQASRFLFMQNRVRMICDCSTTPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-----------SMK 362
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASL MAVIIN D +MK
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEEGGGTTSGRSTMK 298
Query: 363 LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDML 422
LWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL ME+Q+A QL EK+IL TQ LLCDML
Sbjct: 299 LWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMEVQLAAQLTEKHILWTQTLLCDML 358
Query: 423 LRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTG 482
LRDAP IV+QSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TG
Sbjct: 359 LRDAPIGIVSQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTG 418
Query: 483 LSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDN 542
LSTDSLA+AGYPGAA LG AVCGMA ARITS+DFLFWFRSHTAKE+KWGGAKHHP+ KD+
Sbjct: 419 LSTDSLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDD 478
Query: 543 GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQ 602
G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K +T+
Sbjct: 479 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHTRL 537
Query: 603 NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKS 662
N K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWN KVAELTGLP EAMGKS
Sbjct: 538 NDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNVKVAELTGLPVGEAMGKS 597
Query: 663 LIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKN 722
L+ ++V +ES +VE ++ RAL GEE+KNVE+KLR F QKQ +Y++ NAC+S DY +
Sbjct: 598 LVHDLVFQESAESVEKMLYRALRGEEEKNVEIKLRTFGPQKQKEAIYLVANACSSLDYTD 657
Query: 723 NVKG 726
N+ G
Sbjct: 658 NIVG 661
>gi|406685659|gb|AFS51270.1| phytochrome P, partial [Tsuga caroliniana]
Length = 656
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/660 (70%), Positives = 541/660 (81%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL +AA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASAHSLERAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P ++GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGS+ASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLST
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTG 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+A ITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G KM
Sbjct: 418 SLADAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRKM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K + N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVRARLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DE SSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDERSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES VE ++ AL G+E+KNVE+ LR F QKQ V+++VNAC+SRD+ N+ G
Sbjct: 597 LVFEESVERVEKMLYNALRGQEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685535|gb|AFS51208.1| phytochrome P, partial [Nageia wallichiana]
Length = 660
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/663 (70%), Positives = 537/663 (80%), Gaps = 21/663 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEEANFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
+G D RTLFTP S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TLGTDVRTLFTPSSARALEKAAMAPDISLMNPICVHSQYS--RKPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVTVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STL +PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLGAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSI DLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSITDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRS+TAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSNTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKYQGIDELSSVATEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +VV E+S VE ++ RAL GEE+KNVE++LR F QKQ +Y++VNAC+SRDY N
Sbjct: 598 VHDVVLEDSAECVEKMLYRALRGEEEKNVEIRLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 724 VKG 726
+ G
Sbjct: 658 IVG 660
>gi|406685651|gb|AFS51266.1| phytochrome P, partial [Pinus elliottii]
Length = 656
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/660 (70%), Positives = 543/660 (82%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E + + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQQDVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VIDLE
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDLE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P ++GD +S AGAVQSQKLAV AISRLQ+LPGGD+GLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPGGDVGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QA LQL MELQ+A QL EK+IL+TQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P VTQSPSI DLVKCDGAALYYGG CW+ GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PMGTVTQSPSIRDLVKCDGAALYYGGMCWMXGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSKDF FWFRSHTAKE+KWGGAKHHP+ KD+ +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASARITSKDFPFWFRSHTAKEMKWGGAKHHPDDKDDARRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGMDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V EES VE ++ AL GEE+KNVE+ L+ F QK+ V ++VNAC+SRD+ +N+ G
Sbjct: 597 LVFEESVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNIVG 656
>gi|218683885|gb|ACL00897.1| phytochrome B [Planodes virginica]
Length = 653
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/653 (68%), Positives = 536/653 (82%), Gaps = 13/653 (1%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
++SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GNNVGGGRNSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIM+LVKCDGAA Y G+ + +GV PTE+QLKDI
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMNLVKCDGAAFLYHGKYYRLGVAPTEAQLKDIV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHP+ KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 GGAKHHPDDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEV 420
Query: 591 ENDSKVQGNTQQ--NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
+SK Q + S G+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+A
Sbjct: 421 AMNSKAADGAVQCRDMSGEHGLDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIA 480
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ +++++E++ V L+ RAL G+EDKNVE+KL+ F + Q V
Sbjct: 481 ELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALKGDEDKNVEVKLKTFSPELQGKAV 540
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+
Sbjct: 541 FMVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAA 600
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
DEN CC EWN AMEK+TGW R EVIGKML E+FGN CR+K D LT+FMI+L
Sbjct: 601 DENTCCLEWNTAMEKLTGWSRGEVIGKMLVGEVFGNCCRLKSPDALTRFMIVL 653
>gi|218683863|gb|ACL00886.1| phytochrome B [Capsella bursa-pastoris]
Length = 654
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/654 (68%), Positives = 533/654 (81%), Gaps = 14/654 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD+
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESGA 420
Query: 591 ENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+SK Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+
Sbjct: 421 AMNSKTGDGVVQPYRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKI 480
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGL EAMGKSL+ +++++E++ V L+ RAL G+EDKNVE+KL+ F + Q
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFTPELQGKA 540
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA
Sbjct: 541 VFVIVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
+DEN CC EWN AMEK+TG R EV+GKML E+FG+ C++KG D LTKFMI+L
Sbjct: 601 ADENTCCLEWNTAMEKLTGLSRSEVVGKMLVGEVFGSCCKLKGPDALTKFMIVL 654
>gi|218683851|gb|ACL00880.1| phytochrome B [Barbarea vulgaris]
Length = 654
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/654 (68%), Positives = 539/654 (82%), Gaps = 14/654 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEE 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GNNVGGGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIM+LVKCDGAA Y G+ + +GV PTE+Q+KDI
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMNLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 591 ENDSK-VQGNTQ--QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+SK V G Q ++ S QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+
Sbjct: 421 AMNSKSVDGAVQPCRDMSGEQGLDELGAVAREMVRLIETATVPIFAVDTGGCINGWNAKI 480
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEEKNVEVKLKTFSPELQEKA 540
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
++++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S N LIPPIFA
Sbjct: 541 IFMVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNLLIPPIFA 600
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
+DEN CC EWN AMEK+TGW R E+IGKML E+FGN CR+KG D LT+FMI+L
Sbjct: 601 ADENTCCLEWNTAMEKLTGWSRGEMIGKMLVGEVFGNCCRLKGPDALTRFMIVL 654
>gi|218683861|gb|ACL00885.1| phytochrome B [Capsella bursa-pastoris]
Length = 654
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/654 (68%), Positives = 532/654 (81%), Gaps = 14/654 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ A+Q++EK
Sbjct: 181 GSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQPALQMSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD+
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NH D TGLSTDSL +AGYPGAA LG AVC MA A IT +DFLFWFRSHTAKE+KW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCSMAVAYITKRDFLFWFRSHTAKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 591 ENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+SK Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+
Sbjct: 421 AMNSKTGDGVVQPYRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDTGGCINGWNAKI 480
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGL EAMGKSL+ +++++E++ V L+ RAL G+EDKNVE+KL+ F + Q
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFTPELQGKA 540
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA
Sbjct: 541 VFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
+DEN CC EWN AMEK+TGW EV+GKML E+FG+ C++KG D LTKFMI+L
Sbjct: 601 ADENTCCLEWNTAMEKLTGWSLSEVVGKMLVGEVFGSCCKLKGPDALTKFMIVL 654
>gi|406685631|gb|AFS51256.1| phytochrome P, partial [Abies lasiocarpa]
Length = 656
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/660 (70%), Positives = 541/660 (81%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN LEMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVLSMEQPQQEVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA + EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P ++GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRS+LEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D S+KLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAAL+YGG CW++GVTPTE+Q+KDIA WLL +HGD GLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSAGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSK+FLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASARITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKA LEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSFKALLEVVKRRSSPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+ EES VE ++ AL GEE+ NVE+ LR F QKQ V+++VNAC+SRD+ N+ G
Sbjct: 597 PLFEESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|218683883|gb|ACL00896.1| phytochrome B [Pachycladon novaezelandiae]
Length = 654
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/654 (68%), Positives = 535/654 (81%), Gaps = 14/654 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+VIDLEP+++ PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGVVIDLEPARTEGPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCYATPVLVVQEDGLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD+
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NH D TGLSTDSL +AGYPGAA L AVCGMA A IT +DFLFWFRSHT KE+KW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALEDAVCGMAVAYITKRDFLFWFRSHTGKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 591 ENDSK-VQGNTQ--QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+SK V G Q ++ + QG+DEL +VA EMVRLIETAT PIF VDS G INGWNAK+
Sbjct: 421 AMNSKTVDGAVQPYRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDSGGCINGWNAKI 480
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGL EAMGKSL+ +++++E++ V L+ RAL G+EDKNVE+KL+ F + Q
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKA 540
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA
Sbjct: 541 VFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
+DEN CC EWN AMEK+ GW R EVIGKML E+FGN CR+KG D LTKFMI+L
Sbjct: 601 ADENTCCLEWNTAMEKLMGWSRSEVIGKMLVGEVFGNCCRLKGPDALTKFMIVL 654
>gi|37723871|gb|AAR02191.1| phytochrome A [Cyrtosia septentrionalis]
Length = 1118
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/937 (50%), Positives = 630/937 (67%), Gaps = 37/937 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFG 97
II DA L AEF+ A G F+YS+S+ +PP+ E++TAYL IQRG LIQPFG
Sbjct: 22 IIAQTTVDAKLDAEFD---AMGTCFDYSQSIRAPPDEQRSEKVTAYLQHIQRGKLIQPFG 78
Query: 98 CMLAVEEPTFRIIGYSENCLEMLDLRS---RSEDFELNGLIGIDARTLFTPPSGASLAKA 154
C+LA++E TF+++ +SEN EML + S S +IG D R LFT PS A+L KA
Sbjct: 79 CLLALDEKTFKVLAFSENAPEMLTMVSFTVPSVGDHPTIVIGTDVRNLFTSPSTAALQKA 138
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
E+SLLNPILVH S +PFYAI+HR+ +++D EP K D ++ AGA+QS K
Sbjct: 139 LGFAEVSLLNPILVHCKSSG--RPFYAIVHRVTGCLIVDFEPVKPNDVPMTAAGALQSYK 196
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AIS+LQ+LP G + LC+TV+E+V +LTGYDRVM+Y FH+DDHGEV +EI + LE
Sbjct: 197 LAAKAISKLQSLPSGSMEKLCNTVIEEVFELTGYDRVMVYKFHEDDHGEVFAEITKPGLE 256
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
Y G+H+PA DIPQAARFLF +N+VRMICDCHA V V Q K+L + STLR+PH
Sbjct: 257 SYFGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVYQDKKLPFDISFCGSTLRAPHS 316
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHTSPRYIPF 379
CHLQYM NM SIASLVMAV++N + +LWGLVVCH+ SPR++PF
Sbjct: 317 CHLQYMENMNSIASLVMAVVVNEGEEDGGNEAEENSPPHRRKRLWGLVVCHNESPRFVPF 376
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRD-APFSIVTQSPSIM 438
PLRYACEFL+Q F++ + E ++ + EK I+RTQ +LCDMLLR+ P I+TQ+P+IM
Sbjct: 377 PLRYACEFLMQVFAIHVNKEFELENLVKEKKIMRTQTMLCDMLLREFVPLGIITQTPNIM 436
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAA Y + W +GVTP+E Q+ DI WL H D TGLSTD+L EAGYPG +
Sbjct: 437 DLVKCDGAAFLYQDKIWRLGVTPSEPQIYDIVHWLSACHMDSTGLSTDNLHEAGYPGISS 496
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG VCGMA ARITSKD LFWFRS A ++WGGAKH KD+G +MHPRSSFKAFLEV
Sbjct: 497 LGDVVCGMAVARITSKDMLFWFRSPAAASIRWGGAKHDAADKDDGRRMHPRSSFKAFLEV 556
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
K RS PW E+NAIHSLQ+++RD+ +E +K + Q N K++G+ E+ V
Sbjct: 557 AKVRSLPWGDHEMNAIHSLQLILRDTLNGIE----NKAIIDPQLNELKLEGMVEV--VTN 610
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETAT PI VD+ G INGWN K+A+LTGL EA GK L+ +V + S V+
Sbjct: 611 EMVRLIETATVPILAVDADGLINGWNMKIAQLTGLSDDEARGKHLL-TIVEDSSIDVVKR 669
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEK 738
++ AL G E++NV+ +++ +++ + ++VNAC SRD +NV G CFV QD+T +K
Sbjct: 670 MLLLALQGIEEQNVQFQVKTSGVRRDDGPLILVVNACVSRDIHSNVVGACFVAQDVTGQK 729
Query: 739 VLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLP 798
++DKF +++GDY+AI+Q+ PLIPPIF +DE CSEWN AM K++GW R EV+ KML
Sbjct: 730 FILDKFTKIEGDYKAIVQNPCPLIPPIFGTDEFGWCSEWNLAMTKLSGWKRDEVMDKMLL 789
Query: 799 REIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRT 855
E+FG + CRMK QD L F IL+ +GQ TE PF F NR G+ V+ L+ SR+
Sbjct: 790 GEVFGINTSCCRMKSQDALVNFSILISNAFSGQETEKSPFSFMNRSGKHVDCLLSVSRKV 849
Query: 856 DAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHK 915
D EG + G FCF+ +LQ ++Q L + ++K LAYIR E++NPL+GI + K
Sbjct: 850 DVEGNLTGIFCFVLATGHELQ---QSQPLVQQETVKRMKALAYIRNEIRNPLSGIMYTRK 906
Query: 916 LLESSSISENQRQYLETSDACERQIMTIIDGMDLRCI 952
+L +++ E Q L T C Q+ I++ ++L I
Sbjct: 907 MLVGTNLDEEQSLLLSTGAKCHNQLNRILEDLNLEDI 943
>gi|406685287|gb|AFS51084.1| phytochrome P, partial [Taxus cuspidata]
Length = 670
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/674 (68%), Positives = 544/674 (80%), Gaps = 33/674 (4%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---SRSEDF------ELN 132
AYLS++QRGG++QPFGCMLAVEE +F+II YSEN LEML++ S+S+ E
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPAPSQSQSVPNMVGGESE 60
Query: 133 GL--IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
G+ IG D R LFTP S +L +AA ++EISL NPI+V SNS KPFYAI+HRIDVGI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDSNS---GKPFYAIVHRIDVGI 117
Query: 191 VIDLEPSKSGDPALSLA----GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLT 246
VIDLEP + GD A ++ G+V SQ+LAV A SRLQA+P GDIGLLCDTVVE+V++LT
Sbjct: 118 VIDLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELT 177
Query: 247 GYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCH 306
GYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC
Sbjct: 178 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 237
Query: 307 AIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS--------- 357
A PV VIQS ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 ATPVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDG 297
Query: 358 -----KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNIL 412
+ SMKLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E NIL
Sbjct: 298 GGGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNIL 357
Query: 413 RTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWW 472
RTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG CWL+GVTP E+Q+KDIA W
Sbjct: 358 RTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEW 417
Query: 473 LLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGG 532
LL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGG
Sbjct: 418 LLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGG 477
Query: 533 AKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEN 592
AKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++
Sbjct: 478 AKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDS 536
Query: 593 DSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTG 652
D+K + + N K+QG+DELSSVA EMVRLIETATAPI VDSSG +NGWNAKV ELTG
Sbjct: 537 DTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTG 596
Query: 653 LPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILV 712
LP EAMGKSL+ ++V +ES VE ++ A+ GEE+KNVE+KLR F QKQ V+Y++V
Sbjct: 597 LPVGEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVV 656
Query: 713 NACTSRDYKNNVKG 726
NAC+SRDY +N+ G
Sbjct: 657 NACSSRDYTDNIVG 670
>gi|449458123|ref|XP_004146797.1| PREDICTED: phytochrome A-like [Cucumis sativus]
gi|449527803|ref|XP_004170899.1| PREDICTED: phytochrome A-like [Cucumis sativus]
Length = 1148
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/956 (50%), Positives = 641/956 (67%), Gaps = 44/956 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
I+ + DA L + FEQS G SF+YS S+ +P P TAYL +IQ LIQ
Sbjct: 30 ILTQTSIDAKLQSHFEQS---GSSFDYSTSIHLTNNPTAAPPATTTTAYLQQIQISNLIQ 86
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL--IGIDARTLFTPPSGASL 151
PFGC+LA+ T ++I +S+N EML + + D + + L IG D R +FT P+ +L
Sbjct: 87 PFGCLLALHPTTLKLIAFSQNAPEMLTTVAHTVPDGDNHPLLAIGTDLRGIFTAPTATAL 146
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KA A +++LLNPILVHS S KPFYAILHR+ ++ID EP K ++ AGA+Q
Sbjct: 147 LKALAFPDVTLLNPILVHSKSSG--KPFYAILHRVTGSLIIDFEPLKPDQVPVTAAGALQ 204
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AI+RLQALP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEV SE+ +
Sbjct: 205 SYKLAAKAITRLQALPSGSLVRLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVFSEVTKP 264
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
LEPYLG+H+PA DIPQAARFLF +N+VRMI DC A V VIQ + L L L STLR+
Sbjct: 265 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVIQDQNLDFDLTLCGSTLRA 324
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDSM-------------------KLWGLVVCHHT 372
PH CHLQYM NM SIASLVMA+++N ++ +LWGLVVCH+T
Sbjct: 325 PHCCHLQYMENMDSIASLVMAIVVNEEEEEENFDQSNNNDASLQKHKRKRLWGLVVCHNT 384
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
+PR++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+RDAP IV+
Sbjct: 385 TPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQTLLCDMLMRDAPLGIVS 444
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
++P+IMDLVK DGAAL Y + W +G+TPT+ L+DIA W+L H D TGLSTDSL +AG
Sbjct: 445 RTPNIMDLVKSDGAALLYNNKVWRLGITPTDFHLQDIASWILEYHMDSTGLSTDSLYDAG 504
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGA LG VCGMA RI+S D +FWFRSHTA E++WGGAKH P KD+G KMHPRSSF
Sbjct: 505 YPGALALGDVVCGMAAVRISSNDMIFWFRSHTASEIRWGGAKHEPGEKDDGRKMHPRSSF 564
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVD- 611
KAFLEVVK RS PW+ E++AIHSLQ+++R++F++ ++ + + Q S ++ +D
Sbjct: 565 KAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTFKDRDDHMSEIHRKSIQTTLSDLKILDG 624
Query: 612 --ELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVH 669
EL SV EMVRLIETAT PI VD G +NGWN+K+AELTGL +A+GK+L+ +V
Sbjct: 625 RQELESVTSEMVRLIETATVPILAVDVDGLVNGWNSKIAELTGLSVDKAIGKNLL-TLVK 683
Query: 670 EESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCF 729
+ S V+ ++ AL G+E+KNV+ +++ + + ++VNAC S+D NV GVCF
Sbjct: 684 DSSVEIVKKMLVLALQGQEEKNVQFEIKTHNVDINSGSISLIVNACASKDLSENVVGVCF 743
Query: 730 VGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMR 789
V QDIT +K++MDKF +LQGDY+AI+Q+ NPLIPPIF DE C+EWN AM K++GW R
Sbjct: 744 VAQDITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCTEWNLAMTKLSGWSR 803
Query: 790 HEVIGKMLPREIFGN--------FCRMKGQDMLTKFMILLYQGITGQGTE-NFPFGFFNR 840
V+ KML E+FG C++K Q+ I+L ++GQ E N FGF+ R
Sbjct: 804 ESVVNKMLLGEVFGTQLNNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDPEKNISFGFYGR 863
Query: 841 QGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIR 900
G FVE L ++ D +G VIG FCF+Q+ +LQ AL Q L + ++K L Y++
Sbjct: 864 NGMFVECLLCVNKILDRDGAVIGVFCFLQLASQELQQALSIQKLCERTASNRLKALGYMK 923
Query: 901 QEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID-GMDLRCIEEG 955
++++NPL GI F K+L+ + + Q+Q L S C+RQI ++D DL I +G
Sbjct: 924 RQIQNPLCGIIFSRKMLQQTQLGVEQKQLLINSVNCQRQISKVLDESHDLDHIIQG 979
>gi|406685557|gb|AFS51219.1| phytochrome P, partial [Podocarpus coriaceus]
Length = 647
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/650 (70%), Positives = 528/650 (81%), Gaps = 21/650 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEAL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFTP S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+V+D
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVVD 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSR-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
+ +VV EE VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 598 VHDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 647
>gi|406685291|gb|AFS51086.1| phytochrome P, partial [Taxus globosa]
Length = 670
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/674 (68%), Positives = 544/674 (80%), Gaps = 33/674 (4%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---SRSEDF------ELN 132
AYLS++QRGG++QPFGCMLAVEE +F+II YSEN LEML++ S+S+ E
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 133 GL--IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
G+ IG D R LFTP S +L +AA ++EISL NPI+V SNS KPFYAI+HRIDVGI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDSNS---GKPFYAIVHRIDVGI 117
Query: 191 VIDLEPSKSGDPALSLA----GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLT 246
VIDLEP + GD A ++ G+V SQ+LAV A SRLQA+P GDIGLLCDTVVE+V++LT
Sbjct: 118 VIDLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELT 177
Query: 247 GYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCH 306
GYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC
Sbjct: 178 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 237
Query: 307 AIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS--------- 357
A PV VIQS ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 ATPVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDG 297
Query: 358 -----KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNIL 412
+ SMKLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E NIL
Sbjct: 298 GGGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNIL 357
Query: 413 RTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWW 472
RTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG CWL+GVTP E+Q+KDIA W
Sbjct: 358 RTQTLLCDMLLRDAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEW 417
Query: 473 LLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGG 532
LL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGG
Sbjct: 418 LLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGG 477
Query: 533 AKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEN 592
AKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++
Sbjct: 478 AKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDS 536
Query: 593 DSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTG 652
D+K + + N K+QG+DELSSVA EMVRLIETATAPI VDSSG +NGWNAKV ELTG
Sbjct: 537 DTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTG 596
Query: 653 LPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILV 712
LP EAMGKSL+ ++V +ES VE ++ A+ GEE+KNVE+KLR F QKQ V+Y++V
Sbjct: 597 LPVGEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVV 656
Query: 713 NACTSRDYKNNVKG 726
NAC+SRDY +N+ G
Sbjct: 657 NACSSRDYTDNIVG 670
>gi|406685459|gb|AFS51170.1| phytochrome P, partial [Araucaria bidwillii]
Length = 662
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/665 (69%), Positives = 534/665 (80%), Gaps = 36/665 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYL+++QRGG IQPFGCMLAVEE +F+I+ YSEN +EMLDL R E +
Sbjct: 1 AYLTRMQRGGTIQPFGCMLAVEETSFQIVAYSENAVEMLDLSPQSVPNMDMDRDEAMGSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D R LFTP S +L KAA ++EIS++NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVITIGTDVRNLFTPSSARALEKAAMAQEISMMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+VIDLEP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV V+Q+ ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVVQAGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 ------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 299 GGGGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 358
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KD
Sbjct: 359 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 418
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
IA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMATARITSKDFLFWFRSHTAKE+
Sbjct: 419 IADWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEM 478
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++
Sbjct: 479 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 538
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVA
Sbjct: 539 DDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVA 597
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGLP EAMGKSL +++ +ES V+ ++ AL GEE+KNVE+KLR F QKQ +
Sbjct: 598 ELTGLPVGEAMGKSLAHDLIFDESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAI 657
Query: 709 YILVN 713
Y++VN
Sbjct: 658 YLVVN 662
>gi|406685465|gb|AFS51173.1| phytochrome P, partial [Araucaria cunninghamii]
Length = 664
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/667 (69%), Positives = 532/667 (79%), Gaps = 38/667 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYLS++QRGG IQPFGCMLAVEE TF II YSEN +EMLDL R + +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDQAMTSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D RTLFTP S L KAA + EISL+NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVMTIGTDVRTLFTPSSARLLEKAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+VIDLEP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 --------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQL 406
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL
Sbjct: 299 GGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQL 358
Query: 407 AEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQL 466
EK+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+
Sbjct: 359 TEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQI 418
Query: 467 KDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAK 526
KDIA WLL H D TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAK
Sbjct: 419 KDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAK 478
Query: 527 EVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ 586
E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ
Sbjct: 479 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQ 538
Query: 587 EMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
++++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAK
Sbjct: 539 DIDDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAK 597
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
VAELTGLP EAMGKSL+ +++ EES V+ ++ AL GEE+KNVE+KLR F QKQ
Sbjct: 598 VAELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKK 657
Query: 707 VVYILVN 713
+Y++VN
Sbjct: 658 AIYLVVN 664
>gi|218683839|gb|ACL00874.1| phytochrome B [Peritoma arborea]
Length = 652
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/652 (67%), Positives = 532/652 (81%), Gaps = 12/652 (1%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R+DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRADLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA+P+ VIQ + L QPLCLV STLR+PHGCH QYM NMG++ASL MAVIIN
Sbjct: 121 IVDCHAMPIHVIQDERLTQPLCLVGSTLRAPHGCHAQYMANMGTMASLAMAVIINGSEED 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
++SM+LWGLVVCHHTSPR IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GSNVTGGRNSMRLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IV QSPSIMDLVKCDGAA Y G+ + +GV P+E+Q+KDI
Sbjct: 241 VLRTQTLLCDMLLRDSPSGIVMQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEAQIKDIV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NHGD TGLSTDSL +AGYPGAA LG AVCGMA A IT KDF+FWFRSHTAKE+KW
Sbjct: 301 EWLLANHGDSTGLSTDSLGDAGYPGAATLGDAVCGMAVAYITRKDFIFWFRSHTAKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHPE KD+ +MHPRSSFKAFLEVVK+RS PWE +E++ IHSLQ+++RDS +E E
Sbjct: 361 GGAKHHPEDKDDSQRMHPRSSFKAFLEVVKSRSLPWENAEMDVIHSLQLILRDSLKESEA 420
Query: 591 ENDSKVQGNTQQNGSK-MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAE 649
N Q GS +QG+DELS+VA EMVRLIETAT PIF VD G INGWNAK+AE
Sbjct: 421 INAKAAVRADQPGGSNAVQGLDELSAVAREMVRLIETATVPIFAVDVDGHINGWNAKIAE 480
Query: 650 LTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVY 709
LTGL EAMGKSL+ +++++E + L+ AL G+E KNVE+KL+ F + + V+
Sbjct: 481 LTGLSVEEAMGKSLVHDLIYKEYEEPTAKLLSCALKGDEGKNVEIKLKTFSQELEGKAVF 540
Query: 710 ILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASD 769
++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S +PLIPPIFA+D
Sbjct: 541 VIVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIVHSPSPLIPPIFAAD 600
Query: 770 ENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
EN CC EWN AME ++GW R EVIGKML E+FG+ CR+KG D LTK MI+L
Sbjct: 601 ENTCCLEWNTAMENLSGWSRSEVIGKMLVGEVFGSCCRLKGPDALTKLMIVL 652
>gi|406685259|gb|AFS51070.1| phytochrome P, partial [Sciadopitys verticillata]
Length = 642
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/644 (71%), Positives = 530/644 (82%), Gaps = 19/644 (2%)
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNG----LIGIDARTLFTPPSGA 149
GCMLAVEE +F II YSEN +EMLDL + E+ G IG DAR+LF+P S
Sbjct: 1 GCMLAVEESSFNIIAYSENAVEMLDLMPHYVPVNNMEMEGGGVLRIGTDARSLFSPSSAR 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSG-DPALSLAG 208
++ KAA ++EISL+NPI +H KPFYAILHRIDVG+VID EP ++G D +LS AG
Sbjct: 61 AMEKAAMAQEISLMNPIWMHCKKSG--KPFYAILHRIDVGLVIDFEPVRTGGDASLSAAG 118
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
VQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVVSEI
Sbjct: 119 GVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVVSEI 178
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV V+Q++ELKQPLCLV ST
Sbjct: 179 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCCATPVKVVQAEELKQPLCLVGST 238
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFP 380
LR+PHGCH QYM NMGSIASLVMAVIIN D SMKLWGLVVCHHTSPR +PFP
Sbjct: 239 LRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGASGRSSMKLWGLVVCHHTSPRAVPFP 298
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 299 LRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 358
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 359 VKCDGAALYYGGMFWLLGVTPTEAQIKDIAHWLLEYHGDSTGLSTDSLADAGYPGAASLG 418
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 419 DAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 478
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DELSSVA EM
Sbjct: 479 RRSLPWENVEMDAIHSLQLILRGSFQDI-DDSDTKTMVHARLNDLKLQGIDELSSVASEM 537
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VRLIETATAPI VDSSG INGWNAKVAELTGLP EAMGKSL+ ++V EES A E ++
Sbjct: 538 VRLIETATAPILAVDSSGLINGWNAKVAELTGLPVREAMGKSLVHDLVFEESAEAAEKML 597
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNV 724
AL GEE+KNVE+KLR F Q+Q +Y++VNAC+SRDY +++
Sbjct: 598 YHALRGEEEKNVEIKLRTFGPQRQKKAIYLVVNACSSRDYTDSI 641
>gi|406685629|gb|AFS51255.1| phytochrome P, partial [Abies homolepis]
Length = 656
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/660 (70%), Positives = 538/660 (81%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG +QPFGC+LAVEE TFRII YSEN LEMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRVQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSMEQPQQEVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA + EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P + GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLRIGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRS+LEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D S+KLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAAL+YGG CW++GVTPT++Q+K IA WLL +HGD TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTKAQIKGIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYP AA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ K +G +M
Sbjct: 418 SLADAGYPSAASLGDAVCGMAPARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKGDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSS KAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSLKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
++ EES VE ++ AL GEE+ NVE+ LR F QKQ V+++VNAC+SRD+ N+ G
Sbjct: 597 LLFEESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685473|gb|AFS51177.1| phytochrome P, partial [Araucaria luxurians]
Length = 679
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/682 (67%), Positives = 537/682 (78%), Gaps = 40/682 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYLS++QRGG IQPFGCMLAVEE TF II YSEN +EMLDL R E +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D RTLFT S +L +AA + EISL+NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALERAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSGDPALSLAGA-------VQSQKLAVSAISRLQALPGGDIGLLCDTVVE 240
VG+V+DLEP ++G A VQSQKLAV AISRLQ+LP GDIGLLCDTVVE
Sbjct: 119 VGMVMDLEPVRTGSGGGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVE 178
Query: 241 DVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVR 300
DV++LTGYDRVM+Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVR
Sbjct: 179 DVRELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVR 238
Query: 301 MICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS 360
MICDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 MICDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNED 298
Query: 361 ----------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAM 404
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A
Sbjct: 299 EGGGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAA 358
Query: 405 QLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTES 464
QL EK+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+
Sbjct: 359 QLTEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEA 418
Query: 465 QLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHT 524
Q+KDIA WLL H D TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHT
Sbjct: 419 QIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHT 478
Query: 525 AKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDS 584
AKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S
Sbjct: 479 AKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGS 538
Query: 585 FQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWN 644
FQ++++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWN
Sbjct: 539 FQDIDDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWN 597
Query: 645 AKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQ 704
AKVAELTGLP EAMGKSL+ +++ EES V+ ++ AL GEE+KNVE+KLR F QKQ
Sbjct: 598 AKVAELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQ 657
Query: 705 HSVVYILVNACTSRDYKNNVKG 726
+Y++VNAC+SRDY +N+ G
Sbjct: 658 KKAIYLVVNACSSRDYTDNIVG 679
>gi|255642605|gb|ACU21560.1| phytochrome A [Medicago sativa]
Length = 1001
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/822 (53%), Positives = 591/822 (71%), Gaps = 19/822 (2%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D RT+FT PS ++L KA E+SLLNPILVH + KPFYAI+HR+ ++ID
Sbjct: 2 IGTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSG--KPFYAIIHRVTGSLIIDF 59
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y
Sbjct: 60 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAY 119
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEV++E+ ++ LEPYLG+H+PA DIPQAARFL +N+VRMI DCHA V V+Q
Sbjct: 120 KFHEDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLVMKNKVRMIVDCHAKHVKVLQ 179
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------------SM 361
++L L L STLR+PH CHLQYM NM SIASLVMAV++N D
Sbjct: 180 DEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKKK 239
Query: 362 KLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDM 421
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLCDM
Sbjct: 240 RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCDM 299
Query: 422 LLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCT 481
L+RDAP IV+QSP+IMDLVKCDGAAL Y + W++G TP+E Q+++IA W+ H D T
Sbjct: 300 LMRDAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGSTPSEPQIREIALWMSEYHTDST 359
Query: 482 GLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKD 541
GLSTDSL++AG+PGA L VCGMA RITSKD +FWFRSHTA E++WGGAKH P +D
Sbjct: 360 GLSTDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQD 419
Query: 542 NGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ 601
+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++ ++ + + + NT+
Sbjct: 420 DGRKMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKAINTR 479
Query: 602 QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGK 661
N K++G+ EL +V EMVRLIETAT PI VD G +NGWN K++ELTGLP EA+GK
Sbjct: 480 LNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAIGK 539
Query: 662 SLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYK 721
L+ +V + S V+ ++ AL G+E+KNV+ +++ + + ++VNAC SRD
Sbjct: 540 HLL-TLVEDSSTDIVKKMLNLALQGQEEKNVQFEIKTHGSKTDSGPISLIVNACASRDLH 598
Query: 722 NNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAM 781
NV GVCFV QDIT +K +MDKF R++GDY+AI+Q+ N LIPPIF +DE C EWNAAM
Sbjct: 599 ENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAM 658
Query: 782 EKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFF 838
K+TGW R EV+ KML E+FG CR+K Q+ F I+L + +TG TE PFGF
Sbjct: 659 IKITGWKREEVMDKMLLGEVFGTHMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFL 718
Query: 839 NRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAY 898
+R+G++VE L+ S++ DAEG V G FCF+Q+ P+LQ AL Q L + ++K L Y
Sbjct: 719 SRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTY 778
Query: 899 IRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQI 940
+R++++NPL+GI F K+LE++ + Q++ + TS C+RQ+
Sbjct: 779 MRRQIRNPLSGIVFSSKMLENTELGTEQKRIVNTSSQCQRQL 820
>gi|406685627|gb|AFS51254.1| phytochrome P, partial [Abies firma]
Length = 656
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/660 (70%), Positives = 537/660 (81%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG +QPFGC+LAVEE TFRII YSEN LEMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRVQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSMEQPQQEVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA + EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P + GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLRIGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HG IRRS+LEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGGSCRGIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D S+KLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAAL+YGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYP AA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPSAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
++ EES VE ++ AL GEE+ NVE+ LR F QKQ V+++VNAC+SRD+ N+ G
Sbjct: 597 LLFEESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685491|gb|AFS51186.1| phytochrome P, partial [Afrocarpus falcatus]
Length = 647
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/650 (70%), Positives = 527/650 (81%), Gaps = 21/650 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+L VEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLF P S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFKPFSALALEKAAMAPDISLMNPICVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W + VTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + + N
Sbjct: 479 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLN 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
+ +VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 598 VHDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 647
>gi|406685283|gb|AFS51082.1| phytochrome P, partial [Taxus brevifolia]
Length = 672
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/679 (68%), Positives = 540/679 (79%), Gaps = 41/679 (6%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR----------------SR 125
AYLS++QRGG++QPFGCMLAVEE +F+II YSEN LEML++
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSQSVPNMVGGE 60
Query: 126 SEDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHR 185
SE E IG D R LFTP S +L +AA ++EISL NPI+V S+S KPFYAI+HR
Sbjct: 61 SEGIET---IGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDSSS---GKPFYAIVHR 114
Query: 186 IDVGIVIDLEPSKSGDPALSLA----GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
IDVGIVIDLEP + GD A ++ G+V SQ+LAV A SRLQA+P GDIGLLCDTVVE+
Sbjct: 115 IDVGIVIDLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEE 174
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRM
Sbjct: 175 VRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRM 234
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
ICDC A PV VIQS ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 235 ICDCRATPVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNG 294
Query: 358 ----------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLA 407
+ SMKLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL
Sbjct: 295 NDEDGGGGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLI 354
Query: 408 EKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLK 467
E NILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG CWL+GVTP E+Q+K
Sbjct: 355 ENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIK 414
Query: 468 DIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKE 527
DIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE
Sbjct: 415 DIAEWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 474
Query: 528 VKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQE 587
+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ+
Sbjct: 475 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQD 534
Query: 588 MEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+ +++D+K + + N K+QG+DELSSVA EMVRLIETATAPI VDSSG +NGWNAKV
Sbjct: 535 I-DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKV 593
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
ELTGLP EAMGKSL+ ++V +ES VE ++ A+ GEE+KNVE+KLR F QKQ V
Sbjct: 594 GELTGLPVGEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKV 653
Query: 708 VYILVNACTSRDYKNNVKG 726
+Y++VNAC+SRDY +N+ G
Sbjct: 654 IYLVVNACSSRDYTDNIVG 672
>gi|218683847|gb|ACL00878.1| phytochrome B [Arabidopsis halleri]
Length = 654
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/654 (67%), Positives = 535/654 (81%), Gaps = 14/654 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCNAKPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD+
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NH D TGLSTDSL +AGYP AA LG AVCGMA A IT +DFLFWFRSHTAKE+KW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHPE KD+G +MHPR SF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 591 ENDSK-VQGNTQ--QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+SK V G Q ++ + QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+
Sbjct: 421 AMNSKAVDGAVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKI 480
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E++NVE+KL+ F + Q
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEERNVEVKLKTFSPELQGKA 540
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
V+++VNAC S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA
Sbjct: 541 VFVVVNACFSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
+DEN CC EWN AMEK+TGW R EVIGKML E+FG+ C +KG D LTKFMI+L
Sbjct: 601 ADENTCCLEWNMAMEKLTGWSRSEVIGKMLVGEVFGSCCMLKGPDALTKFMIVL 654
>gi|406685289|gb|AFS51085.1| phytochrome P, partial [Taxus floridana]
Length = 670
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/674 (68%), Positives = 542/674 (80%), Gaps = 33/674 (4%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---SRSEDF------ELN 132
AYLS++QRGG++QPFGCMLAVEE +F+II YSEN LEML++ S+S+ E
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 133 GL--IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
G+ IG D R LFTP S +L +AA ++EISL NPI+V SNS KPFYAI+HRIDVGI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDSNS---GKPFYAIVHRIDVGI 117
Query: 191 VIDLEPSKSGDPALSLA----GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLT 246
IDLEP + GD A ++ G+V SQ+LAV A SRLQA+P GDIGLLCDTVVE+V++LT
Sbjct: 118 AIDLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELT 177
Query: 247 GYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCH 306
GYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC
Sbjct: 178 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 237
Query: 307 AIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS--------- 357
A PV VIQ ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 ATPVKVIQPGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDG 297
Query: 358 -----KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNIL 412
+ SMKLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E NIL
Sbjct: 298 GGGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNIL 357
Query: 413 RTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWW 472
RTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG CWL+GVTP E+Q+KDIA W
Sbjct: 358 RTQTLLCDMLLRDAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEW 417
Query: 473 LLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGG 532
LL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGG
Sbjct: 418 LLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGG 477
Query: 533 AKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEN 592
AKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++
Sbjct: 478 AKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDS 536
Query: 593 DSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTG 652
D+K + + N K+QG+DELSSVA EMVRLIETATAPI VDSSG +NGWNAKV ELTG
Sbjct: 537 DTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTG 596
Query: 653 LPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILV 712
LP EAMGKSL+ ++V +ES VE ++ A+ GEE+KNVE+KLR F QKQ V+Y++V
Sbjct: 597 LPVGEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVV 656
Query: 713 NACTSRDYKNNVKG 726
NAC+SRDY +N+ G
Sbjct: 657 NACSSRDYTDNIVG 670
>gi|406685485|gb|AFS51183.1| phytochrome P, partial [Wollemia nobilis]
Length = 677
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/680 (67%), Positives = 539/680 (79%), Gaps = 38/680 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNG----- 133
AYLS++QRGG IQPFGCMLAVEE TFRII YSEN +EMLDL S+S D + +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENAVEMLDLMSQSVPNMDMDRDDAMGSH 60
Query: 134 ------LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
IG D R LFTP S +L KAA ++EISL+NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVITIGTDVRALFTPASAWALEKAAMAQEISLMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSGDPALSLAGA-----VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+VIDLEP ++G AG VQSQKLAV AISRLQ+LP GDIG+LCD VVEDV
Sbjct: 119 VGMVIDLEPVRTGSGGGGDAGLSAAGAVQSQKLAVRAISRLQSLPAGDIGVLCDAVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEVV+E+RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVVAEMRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 --------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQL 406
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL
Sbjct: 299 GGGSGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQL 358
Query: 407 AEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQL 466
EK+ILRTQ LLCDMLLRDAP I+T SPS MDLVKCDGAALYYGG CW++GVTPTE+Q+
Sbjct: 359 MEKHILRTQTLLCDMLLRDAPIGILTHSPSTMDLVKCDGAALYYGGMCWMLGVTPTEAQI 418
Query: 467 KDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAK 526
KDIA WLL HGD TGLSTDSLA+A YPGAA LG AVCGMA ARITSKDFLFWFRSHTAK
Sbjct: 419 KDIADWLLEYHGDSTGLSTDSLADADYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAK 478
Query: 527 EVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ 586
E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ
Sbjct: 479 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQ 538
Query: 587 EMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
++++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAK
Sbjct: 539 DIDDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAK 597
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
VAELTGLP EAMGKSL+ +++ ES ++ ++ AL GEE+KNVE+KLR F QKQ
Sbjct: 598 VAELTGLPVGEAMGKSLVHDLIFHESADTMDKMLYHALRGEEEKNVEIKLRTFGPQKQKK 657
Query: 707 VVYILVNACTSRDYKNNVKG 726
+Y++VNAC+SRDY +N+ G
Sbjct: 658 AIYLVVNACSSRDYTDNIVG 677
>gi|406685625|gb|AFS51253.1| phytochrome P, partial [Abies concolor]
Length = 656
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/660 (70%), Positives = 537/660 (81%), Gaps = 19/660 (2%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG +QPFGC+ AVEE TFRII YSEN LEMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRVQPFGCVPAVEETTFRIIAYSENALEMLDLAPQSVPSMEQPQQEVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA + EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P + GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLRIGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRS+LEPYLG+H+PA DIPQA+RF F QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFSFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D S+KLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAAL+YGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYP AA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPSAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+QG+DELSSVA EMVRLIETATAPI VDS+G +NG KVAELTGLP EAMG SL+ +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGMECKVAELTGLPVGEAMGMSLVQD 596
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
++ EES VE ++ AL GEE+ NVE+ LR F QKQ V+++VNAC+SRD+ N+ G
Sbjct: 597 LLFEESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685669|gb|AFS51275.1| phytochrome P, partial [Taxus canadensis]
Length = 670
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/674 (68%), Positives = 542/674 (80%), Gaps = 33/674 (4%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---SRSEDF------ELN 132
AYLS++QRGG++QPFGCMLAVEE +F+II YSEN LEML++ S+S+ E
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 133 GL--IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
G+ IG D R LFTP S +L +AA ++EISL NPI+V SNS KPFYAI+HRIDVGI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDSNS---GKPFYAIVHRIDVGI 117
Query: 191 VIDLEPSKSGDPALSLA----GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLT 246
VIDLEP + GD A ++ G+V SQ+LAV A SRLQA+P GDIGLLCDTVVE+V++LT
Sbjct: 118 VIDLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELT 177
Query: 247 GYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCH 306
GYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC
Sbjct: 178 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 237
Query: 307 AIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS--------- 357
A PV VIQS ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 ATPVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDG 297
Query: 358 -----KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNIL 412
+ SMKLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E NIL
Sbjct: 298 GGGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNIL 357
Query: 413 RTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWW 472
RTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG CWL+GVTP E+Q+KDIA W
Sbjct: 358 RTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEW 417
Query: 473 LLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGG 532
LL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGG
Sbjct: 418 LLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGG 477
Query: 533 AKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEN 592
AKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++
Sbjct: 478 AKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDS 536
Query: 593 DSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTG 652
D+K + + N K+QG+DELSSVA MVRLIETATAPI VDSSG +NGWNAKV ELTG
Sbjct: 537 DTKTMVHARLNDLKLQGIDELSSVASGMVRLIETATAPILAVDSSGIVNGWNAKVGELTG 596
Query: 653 LPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILV 712
LP EAMGKSL+ ++V +ES VE ++ A+ GEE+KNVE+KLR F QKQ V+Y++V
Sbjct: 597 LPVGEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVV 656
Query: 713 NACTSRDYKNNVKG 726
NA +SRDY +N+ G
Sbjct: 657 NAYSSRDYTDNIVG 670
>gi|406685483|gb|AFS51182.1| phytochrome P, partial [Araucaria subulata]
Length = 662
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/665 (69%), Positives = 531/665 (79%), Gaps = 36/665 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---------SRSEDFELN 132
AYLS++QRGG IQPFGCMLAVEE TF II YSEN +EMLDL R E +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 133 G-----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
G IG D RTLFT S +L KAA + EISL+NPI VHS ++ KPFYAI+HRID
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRID 118
Query: 188 VGIVIDLEPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
VG+V+DLEP ++G D ALS AGAVQSQKLAV AIS LQ+LP GDIGLLCDTVVEDV
Sbjct: 119 VGMVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISGLQSLPAGDIGLLCDTVVEDV 178
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTGYDRVM+Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI
Sbjct: 179 RELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 238
Query: 303 CDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-- 360
CDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 239 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 298
Query: 361 ------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL E
Sbjct: 299 GGGGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 358
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KD
Sbjct: 359 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 418
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
IA WLL H D TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+
Sbjct: 419 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 478
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++
Sbjct: 479 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 538
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
++ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVA
Sbjct: 539 DDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVA 597
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGLP EAMGKSL+ +++ EES ++ ++ AL GEE+KNVE+KLR F QKQ +
Sbjct: 598 ELTGLPVGEAMGKSLVHDLIFEESANTLDKMLYHALRGEEEKNVEIKLRTFAPQKQKKAI 657
Query: 709 YILVN 713
Y++VN
Sbjct: 658 YLVVN 662
>gi|406685281|gb|AFS51081.1| phytochrome P, partial [Taxus baccata]
Length = 670
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/674 (68%), Positives = 543/674 (80%), Gaps = 33/674 (4%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---SRSEDF------ELN 132
AYLS++QRGG++QPFGCMLAVEE +F+II YSEN LEML++ S+S+ E
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 133 GL--IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
G+ IG D R LFTP S +L +AA ++EISL NPI+V SNS KPFYAI+HRIDVGI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDSNS---GKPFYAIVHRIDVGI 117
Query: 191 VIDLEPSKSGDPALSLA----GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLT 246
VIDLEP + GD A ++ G+V SQ+LAV A SRLQA+P GDIGLLCDTVVE+V++LT
Sbjct: 118 VIDLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELT 177
Query: 247 GYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCH 306
GYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIP+A+RFLF QNRVRMICDC
Sbjct: 178 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCR 237
Query: 307 AIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS--------- 357
A PV VIQS ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 ATPVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDG 297
Query: 358 -----KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNIL 412
+ SMKLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E NIL
Sbjct: 298 GGGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNIL 357
Query: 413 RTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWW 472
RTQ LLCDMLLRDAP I+TQSPSIMDLVKCDGAALYYGG CWL+GVTP E+Q+KDIA W
Sbjct: 358 RTQTLLCDMLLRDAPIGILTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEW 417
Query: 473 LLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGG 532
LL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLF FRSHTAKE+KWGG
Sbjct: 418 LLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFRFRSHTAKEMKWGG 477
Query: 533 AKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEN 592
AKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++
Sbjct: 478 AKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDS 536
Query: 593 DSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTG 652
D+K + Q N K+QG+DELSSVA EMVRLIETATAPI VDSSG +NGWNAKV ELTG
Sbjct: 537 DTKTMVHAQLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTG 596
Query: 653 LPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILV 712
LP EAMGKSL+ ++V +ES VE ++ A+ GEE+KNVE+KLR F QKQ V+Y++V
Sbjct: 597 LPVGEAMGKSLVHDLVFDESVETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVV 656
Query: 713 NACTSRDYKNNVKG 726
NAC+SRDY +N+ G
Sbjct: 657 NACSSRDYTDNIVG 670
>gi|218683869|gb|ACL00889.1| phytochrome B [Pachycladon stellatum]
Length = 654
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/654 (67%), Positives = 526/654 (80%), Gaps = 14/654 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGY RVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYHRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEED 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
+ SM+LWGLVVCHHTS IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 181 GSNVASGRSSMRLWGLVVCHHTSSHCIPFPLRYACEFLMQAFGLQLNMELQLALQMSETR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ +L+GV P+E Q+ DI
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYLLGVAPSEVQINDIV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NH D T LSTDSL +AGYP AA LG AVCGMA A IT +DFLFWFRSHT KE+KW
Sbjct: 301 EWLLANHSDSTRLSTDSLGDAGYPRAAALGDAVCGMAVAYITKRDFLFWFRSHTGKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS P E + ++AIHSLQ+++RDSF+E E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPRETAGMDAIHSLQLILRDSFKESEA 420
Query: 591 ENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+SK Q M QG+DEL +VA EMVRLIETAT PIF VDS G INGWNAK+
Sbjct: 421 AMNSKTVDGAVQPYRDMVGEQGIDELGAVAREMVRLIETATVPIFAVDSGGCINGWNAKI 480
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGL EAMGKSL+ +++++E++ V L+ RAL G+EDKNVE+KL+ F + Q
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKA 540
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA
Sbjct: 541 VFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFA 600
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
+DEN CC EWN AMEK+ GW R EVIGKML E+FGN CR+KG D LTKFMI+L
Sbjct: 601 ADENTCCLEWNTAMEKLMGWSRSEVIGKMLVGEVFGNCCRLKGPDALTKFMIVL 654
>gi|406685293|gb|AFS51087.1| phytochrome P, partial [Taxus fuana]
Length = 670
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/674 (68%), Positives = 542/674 (80%), Gaps = 33/674 (4%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR---SRSEDF------ELN 132
AYLS++QRGG++QPFGCMLAVEE +F+II YSEN LEML++ S+S+ E
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 133 GL--IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
G+ IG D R LFTP S +L +AA ++EISL NPI+V SNS KPFYAI+HRIDVGI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVDSNS---GKPFYAIVHRIDVGI 117
Query: 191 VIDLEPSKSGDPALSLA----GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLT 246
VIDLEP + GD A ++ G+V SQ+LAV A SRLQA+P GDIGLLCDTVVE+V++LT
Sbjct: 118 VIDLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELT 177
Query: 247 GYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCH 306
GYDRVM+Y FH+D+ GEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF Q RVRMICDC
Sbjct: 178 GYDRVMVYKFHEDERGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQTRVRMICDCR 237
Query: 307 AIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS--------- 357
A PV VIQS ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 ATPVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDG 297
Query: 358 -----KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNIL 412
+ SMKLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E NIL
Sbjct: 298 GGGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNIL 357
Query: 413 RTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWW 472
RTQ LLCDMLLRDAP I+TQSPSIMDLVKC+GAALYYGG CWL+GVTP E+Q+KDIA W
Sbjct: 358 RTQTLLCDMLLRDAPIGILTQSPSIMDLVKCEGAALYYGGMCWLLGVTPMEAQIKDIAEW 417
Query: 473 LLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGG 532
LL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGG
Sbjct: 418 LLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGG 477
Query: 533 AKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEN 592
AKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++
Sbjct: 478 AKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDS 536
Query: 593 DSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTG 652
D+K + + N K+QG+DELSSVA EMVRLIETATAPI VDSSG +NGWNAKV ELTG
Sbjct: 537 DTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTG 596
Query: 653 LPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILV 712
LP EAMGKSL+ ++V +ES VE ++ A+ GEE+KNVE+KLR F QKQ V+Y++V
Sbjct: 597 LPVGEAMGKSLVHDLVFDESVKTVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKEVIYLVV 656
Query: 713 NACTSRDYKNNVKG 726
NAC+SRDY +N+ G
Sbjct: 657 NACSSRDYTDNIVG 670
>gi|406685275|gb|AFS51078.1| phytochrome P, partial [Cephalotaxus mannii]
Length = 675
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/679 (68%), Positives = 539/679 (79%), Gaps = 38/679 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS------------EDF 129
AYLS++QRGG IQPFGCMLAVEE +F+II YSEN LEMLD+ S E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSVPTMEGG 60
Query: 130 ELNGL--IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
E G+ IG D R LFTP SG +L +AA S+EISL NPI + SNS KPFYAI+HRID
Sbjct: 61 ESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMDSNS---GKPFYAIVHRID 117
Query: 188 VGIVIDLEPSKSGDPALSLA--------GAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
VGIVIDLE + GD A ++ G V SQ+LAV A SRLQA+P GDIGLLCDTVV
Sbjct: 118 VGIVIDLELVRRGDAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDTVV 177
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E+V++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRV
Sbjct: 178 EEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRV 237
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMICDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 RMICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNG 297
Query: 358 ----------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLA 407
+ SMKLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL
Sbjct: 298 NDEDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLT 357
Query: 408 EKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLK 467
E NILRTQ LLCDMLLRDAP IV+QSPSIMDLVKCDGAALYYGG WL+GVTP E+Q+K
Sbjct: 358 ENNILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMFWLLGVTPVEAQIK 417
Query: 468 DIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKE 527
DIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE
Sbjct: 418 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 477
Query: 528 VKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQE 587
+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SF++
Sbjct: 478 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFED 537
Query: 588 MEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+ +++D+K + + N K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKV
Sbjct: 538 I-DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNAKV 596
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
ELTGLP EAMGKSL+ ++V EES VE ++ AL GEE+KNVE+KLR F QKQ V
Sbjct: 597 GELTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKV 656
Query: 708 VYILVNACTSRDYKNNVKG 726
+Y++VNAC+SRDY +N+ G
Sbjct: 657 IYLVVNACSSRDYTDNIVG 675
>gi|218683837|gb|ACL00873.1| phytochrome B [Capparis frondosa]
Length = 652
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/652 (67%), Positives = 528/652 (80%), Gaps = 14/652 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVGIVIDLEP+++ D ALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGIVIDLEPARTEDSALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V++LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRELTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-- 359
I DCHA V ++Q EL QPLCLV STLR+PH CH QYM NMGS+ASL MAVIIN D
Sbjct: 121 IVDCHATTVRLVQDDELMQPLCLVGSTLRAPHECHAQYMANMGSLASLAMAVIINGSDEE 180
Query: 360 ---------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A Q++EK
Sbjct: 181 GTNVNSGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQVSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + VGVTPTE+Q+KDI
Sbjct: 241 VLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAAFLYQGKYYPVGVTPTEAQIKDIV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL HGD TGLSTDSLA+AGYP AA LG AVCGM A IT +DFLFWFRSHTAKE+KW
Sbjct: 301 EWLLAYHGDSTGLSTDSLADAGYPSAAALGDAVCGMVVAYITKRDFLFWFRSHTAKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHP+ KD+G +MHPRSSFKAFLEVVK+RS PWE +E++A+HSLQ+++RDS +E E
Sbjct: 361 GGAKHHPQDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAVHSLQLILRDSIKESEA 420
Query: 591 ENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
N SK T Q G M QG+DELS++A EMVRLIETAT PIF VD G INGWNAK+A
Sbjct: 421 TN-SKAVVQTHQPGGDMAVQGLDELSTIAREMVRLIETATVPIFAVDVDGHINGWNAKIA 479
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ +++ +E + AV+ + AL G EDKNVE+KL+ F + +
Sbjct: 480 ELTGLSVEEAMGKSLVHDLICKEYEEAVDKFLSHALRGVEDKNVEIKLKTFGPELHKRAL 539
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +K++MDKFI +QGDY+AII S +PLIPPIFA+
Sbjct: 540 FVVVNACSSKDYLDNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIIHSPSPLIPPIFAA 599
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMIL 820
DEN CC EWN AMEK+TGW R E+IG+ L E+FG+ CR+KG D LT FMI+
Sbjct: 600 DENTCCLEWNTAMEKLTGWSREEIIGRTLVGEVFGSCCRLKGPDTLTNFMIV 651
>gi|218683893|gb|ACL00901.1| phytochrome B [Stanleya pinnata]
Length = 633
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/633 (69%), Positives = 518/633 (81%), Gaps = 13/633 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E RR DLEPYLG+H+PA DIPQA+RFLFKQNRVRMI DCHA PV+V+Q L Q
Sbjct: 61 GEVVAESRRDDLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCH 370
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN + SM+LWGLVVCH
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNVAGGRSSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKCDGAA Y G+ + +GV PTE+Q+KD+ WLL NH D TGLSTDSL +
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDVVEWLLANHADSTGLSTDSLGD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM--Q 608
SFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E +SK Q S Q
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGAIQPCSMAGEQ 420
Query: 609 GVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVV 668
G+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ +++
Sbjct: 421 GIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLI 480
Query: 669 HEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVC 728
++E++ V+ LI RAL G+EDKNVE+KL+ F + Q V+++VNAC+S+DY NN+ GVC
Sbjct: 481 YKENEETVDKLIARALKGDEDKNVEIKLKTFSPELQGKAVFVVVNACSSKDYSNNIVGVC 540
Query: 729 FVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWM 788
FVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN CC EWN AMEK+TGW
Sbjct: 541 FVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWS 600
Query: 789 RHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGKML E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 RSEVIGKMLVGEVFGSCCRLKGPDALTKFMIVL 633
>gi|218683835|gb|ACL00872.1| phytochrome B [Capparis frondosa]
Length = 652
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/653 (67%), Positives = 528/653 (80%), Gaps = 14/653 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVGIVIDLEP+++ D ALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLC TVVE
Sbjct: 1 ILHRIDVGIVIDLEPARTEDSALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCGTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V++L GYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRELIGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-- 359
I DCHA PV ++Q EL QPLCLV STLR+PH CH QYM NMGS+ASL MAVIIN D
Sbjct: 121 IVDCHATPVRLVQDDELMQPLCLVGSTLRAPHECHAQYMANMGSLASLAMAVIINGSDEE 180
Query: 360 ---------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A Q++EK
Sbjct: 181 GTNVNSGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQVSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GVTPTE+Q+KDI
Sbjct: 241 VLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAAFLYQGKYYPLGVTPTEAQIKDIV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL HGD TGL+TDSLA+AGYP AA LG AVCGM A IT +DFLFWFRSHTAKE+KW
Sbjct: 301 EWLLAYHGDSTGLTTDSLADAGYPSAAALGDAVCGMVVAYITKRDFLFWFRSHTAKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHP+ KD+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDS +E E
Sbjct: 361 GGAKHHPQDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSIKESEA 420
Query: 591 ENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
N SK T Q G M QG+DELS++A EMVRLIETAT PIF VD G INGWNAK+A
Sbjct: 421 TN-SKAVVQTHQPGGDMAVQGLDELSTIAREMVRLIETATVPIFAVDVDGHINGWNAKIA 479
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ +++ +E + AV+ + AL G EDKNVE+KL+ F + +
Sbjct: 480 ELTGLSVEEAMGKSLVHDLICKEYEEAVDKFLSHALRGVEDKNVEIKLKTFGPELHKRAL 539
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY +N+ GVCFVGQD+T +K++MDKFI +QGDY+AII S +PLIPPIFA+
Sbjct: 540 FVVVNACSSKDYLDNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIIHSPSPLIPPIFAA 599
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
DEN CC EWN AMEK+TGW R E+IG+ L E+FG+ CR+KG D LT FMI+L
Sbjct: 600 DENTCCLEWNTAMEKLTGWSREEIIGRTLVGEVFGSCCRLKGPDTLTNFMIVL 652
>gi|242033161|ref|XP_002463975.1| hypothetical protein SORBIDRAFT_01g009930 [Sorghum bicolor]
gi|241917829|gb|EER90973.1| hypothetical protein SORBIDRAFT_01g009930 [Sorghum bicolor]
Length = 1131
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/941 (49%), Positives = 630/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 GYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ EN PFG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>gi|39777231|gb|AAR30885.1| phytochrome A [Sorghum bicolor]
gi|39777233|gb|AAR30886.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/941 (49%), Positives = 630/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 GYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ EN PFG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>gi|11134026|sp|P93526.1|PHYA_SORBI RecName: Full=Phytochrome a
gi|1800215|gb|AAB41397.1| phytochrome A [Sorghum bicolor]
gi|39777227|gb|AAR30883.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/941 (49%), Positives = 630/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 GYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ EN PFG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>gi|406685301|gb|AFS51091.1| phytochrome P, partial [Torreya grandis]
Length = 675
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/679 (68%), Positives = 535/679 (78%), Gaps = 38/679 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLD----------LRSRSEDFEL 131
AYLS++QRGG IQPFGCMLAVEE +F+II YSEN LEMLD + R D +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHFQSVPNMEGRGGDCDG 60
Query: 132 NGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIV 191
IG D R LFTP SG +L +AA ++EISL NPI + SNS KPFYAI+HRIDVGIV
Sbjct: 61 FLTIGSDVRRLFTPSSGRNLERAAMAQEISLTNPIAMESNS---GKPFYAIVHRIDVGIV 117
Query: 192 IDLEPSKSGDPALSLAGA--------VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQ 243
IDLEP + GD A ++ A V SQ+LAV A SRLQ++P GDIGLLCDTVVE+V+
Sbjct: 118 IDLEPVRRGDAAALVSWAGGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVR 177
Query: 244 KLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMIC 303
+LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMIC
Sbjct: 178 ELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIC 237
Query: 304 DCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---- 359
DC A PV V Q++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 DCRATPVKVKQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGIDED 297
Query: 360 ------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLA 407
S+KLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL
Sbjct: 298 GVTGSGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLI 357
Query: 408 EKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLK 467
E +ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG WL+GVTPTE+QLK
Sbjct: 358 ENSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLK 417
Query: 468 DIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKE 527
DIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE
Sbjct: 418 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 477
Query: 528 VKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQE 587
+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RSFPWE E++AIHSLQ+++R SFQ+
Sbjct: 478 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQD 537
Query: 588 MEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+++ +K + + N K+QG+DELSSVA EMVRLIETATAPI VDSSG +NGWNAKV
Sbjct: 538 IDDSG-TKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKV 596
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
ELTGLP EAMGKSL+ ++V EES VE ++ AL GEE+KNVE+KLR F QKQ V
Sbjct: 597 GELTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKV 656
Query: 708 VYILVNACTSRDYKNNVKG 726
+Y++VNAC+SRDY + + G
Sbjct: 657 IYLVVNACSSRDYTDKIVG 675
>gi|39777251|gb|AAR30895.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/941 (49%), Positives = 629/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 GYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ E PFG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>gi|218683915|gb|ACL00912.1| phytochrome D [Draba altaica]
Length = 655
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/655 (66%), Positives = 530/655 (80%), Gaps = 15/655 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHR+DVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV V++ L Q +CLV STLRSPHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCHASPVRVVKGDRLTQSICLVGSTLRSPHGCHAQYMANMGSIASLAMAVIINGNEED 180
Query: 358 --------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEK 409
++SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEK 240
Query: 410 NILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDI 469
+LR Q LLCDMLLRD+P IVTQSPSIMDLVKC+GAA Y G+ + +GV P+E+Q+ DI
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLVKCNGAAFLYQGKYYSLGVAPSEAQINDI 300
Query: 470 AWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVK 529
WLL NH D TGLSTDSL +AGYP AA LG AVCGMA A IT +DFLFWFRSHT KE+K
Sbjct: 301 VEWLLANHSDSTGLSTDSLVDAGYPKAAALGNAVCGMAVAYITKRDFLFWFRSHTEKEIK 360
Query: 530 WGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME 589
WGGAKHHPE KD+G +MHPRSSFKAFLEVVK+R PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESE 420
Query: 590 E-ENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
++ S G Q + +M QG+ E+ +VA EMVRLIETAT PIF VD G +NGWNAK
Sbjct: 421 AMDSKSAAAGAVQPHDQEMAEQGLKEVGAVAREMVRLIETATVPIFAVDMDGCVNGWNAK 480
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
+AELTGL +AMGKSL+ +++H+E + V+ L+ RAL G+E KNVE+KL+ F + Q
Sbjct: 481 IAELTGLSVEDAMGKSLVRDLIHKEYEETVDRLLSRALKGDEGKNVEVKLKTFGSELQAK 540
Query: 707 VVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIF 766
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +Q DY+AII S NPLIPPIF
Sbjct: 541 AVFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQRDYKAIIHSPNPLIPPIF 600
Query: 767 ASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
A+DEN CC EWNAAMEK+TGW R EVIGK+L E+FG+ C++KG D +TKFMI+L
Sbjct: 601 AADENTCCLEWNAAMEKLTGWPRSEVIGKLLVGEVFGSCCKLKGPDAITKFMIVL 655
>gi|39777239|gb|AAR30889.1| phytochrome A [Sorghum bicolor]
gi|39777245|gb|AAR30892.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/941 (49%), Positives = 629/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 GYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ E PFG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>gi|39777241|gb|AAR30890.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/941 (49%), Positives = 629/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 GYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ E PFG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>gi|39777247|gb|AAR30893.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777249|gb|AAR30894.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777257|gb|AAR30898.1| phytochrome A [Sorghum bicolor subsp. x drummondii]
Length = 1131
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/941 (49%), Positives = 629/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 GYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ E PFG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>gi|406685307|gb|AFS51094.1| phytochrome P, partial [Torreya taxifolia]
Length = 675
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/679 (67%), Positives = 534/679 (78%), Gaps = 38/679 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLD----------LRSRSEDFEL 131
AYLS++QRGG IQPFGCMLAVEE +F+II YSEN LEMLD + R D +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHFQSVPNMEGRDGDSDG 60
Query: 132 NGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIV 191
IG D R LFTP SG +L +AA ++EISL NPI + SNS KPFYAI+HRIDVGIV
Sbjct: 61 FLTIGSDVRRLFTPSSGRNLERAAMAQEISLTNPIAMESNS---GKPFYAIVHRIDVGIV 117
Query: 192 IDLEPSKSGDPALSLAGA--------VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQ 243
IDLEP + GD A ++ A V SQ+LAV A SRLQ++P GDIGLLCDTVVE+V+
Sbjct: 118 IDLEPVRRGDAAALVSWAGGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVR 177
Query: 244 KLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMIC 303
+LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMIC
Sbjct: 178 ELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIC 237
Query: 304 DCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---- 359
DC A PV V Q++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 DCRATPVKVKQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGIDED 297
Query: 360 ------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLA 407
S+KLWGLVVCHHTSPR + FPLR ACEFL+Q F LQ+ MELQ+A QL
Sbjct: 298 GVSGSGSGSGRSSIKLWGLVVCHHTSPRAVSFPLRSACEFLMQTFGLQINMELQLAAQLI 357
Query: 408 EKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLK 467
E +ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG WL+GVTPTE+QLK
Sbjct: 358 ENSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLK 417
Query: 468 DIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKE 527
DIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE
Sbjct: 418 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 477
Query: 528 VKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQE 587
+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RSFPWE E++AIHSLQ+++R SFQ+
Sbjct: 478 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQD 537
Query: 588 MEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+++ +K + + N K+QG+DELSSVA EMVRLIETATAPI VDSSG +NGWNAKV
Sbjct: 538 IDDSG-TKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKV 596
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
ELTGLP EAMGKSL+ ++V EES VE ++ AL GEE+KNVE+KLR F QKQ V
Sbjct: 597 GELTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKV 656
Query: 708 VYILVNACTSRDYKNNVKG 726
+Y++VNAC+SRDY + + G
Sbjct: 657 IYLVVNACSSRDYTDKIVG 675
>gi|39777237|gb|AAR30888.1| phytochrome A [Sorghum bicolor]
gi|39777253|gb|AAR30896.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777255|gb|AAR30897.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/941 (49%), Positives = 629/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 GYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ E PFG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>gi|39777243|gb|AAR30891.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/941 (49%), Positives = 629/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 GYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ E PFG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>gi|39777235|gb|AAR30887.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/941 (49%), Positives = 629/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 GYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ E PFG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>gi|39777229|gb|AAR30884.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/941 (49%), Positives = 629/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 GYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ E PFG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>gi|218683843|gb|ACL00876.1| phytochrome B [Cleome hassleriana]
Length = 632
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/633 (69%), Positives = 519/633 (81%), Gaps = 14/633 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R+DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV VIQ + L QP
Sbjct: 61 GEVVAESKRADLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVCVIQDERLTQP 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCH 370
LCLV STLR+PHGCH QYM NMGS+ASL MAVIIN ++SM+LWGLVVCH
Sbjct: 121 LCLVGSTLRAPHGCHAQYMANMGSLASLAMAVIINGNEEEAGSVAGGRNSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPTGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQ PSIMDLVKCDGAA Y GR + +GV P+E+Q+KDI WLL NHGD TGLSTDSLA+
Sbjct: 241 VTQKPSIMDLVKCDGAAFLYQGRYYPLGVAPSEAQIKDIVEWLLANHGDSTGLSTDSLAD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+ +MHPRS
Sbjct: 301 AGYPGAATLGDAVCGMAVAYITRKDFLFWFRSHTAKEIKWGGAKHHPEDKDDSQRMHPRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM--Q 608
SFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E N ++V Q G M Q
Sbjct: 361 SFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKESETVN-TRVAVRADQPGGDMAVQ 419
Query: 609 GVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVV 668
G+DELS+VA EMVRLIETAT PI VD G INGWN K+AELTGL EAMGKSL+ +++
Sbjct: 420 GLDELSAVAREMVRLIETATVPILAVDVEGRINGWNGKIAELTGLSVEEAMGKSLVRDLI 479
Query: 669 HEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVC 728
++E + VE L+ AL GEEDKNVE+K++ F + + V+++VNAC+S+DY NN+ GVC
Sbjct: 480 YKEYEETVEKLLSHALRGEEDKNVEIKMKTFSRELEGQAVFVVVNACSSKDYLNNIVGVC 539
Query: 729 FVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWM 788
FVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN CC EWN AMEK+TGW
Sbjct: 540 FVGQDVTGQKIVMDKFIHIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWS 599
Query: 789 RHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGKML E+FG+ CR+KG D LTKFMI+L
Sbjct: 600 RAEVIGKMLVGEVFGSCCRLKGPDTLTKFMIVL 632
>gi|406685487|gb|AFS51184.1| phytochrome P, partial [Acmopyle pancheri]
Length = 638
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/641 (71%), Positives = 522/641 (81%), Gaps = 20/641 (3%)
Query: 90 GGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------LIGIDARTL 142
GG IQPFGCMLAVEE F+II YS+N LEMLD +S EL IG D RTL
Sbjct: 1 GGTIQPFGCMLAVEETNFKIIAYSQNALEMLDPMPQSVPTMELGKHGGSILTIGTDVRTL 60
Query: 143 FTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDP 202
FTP S +L KAA + +ISL+NPI VHS KPF AI+HRIDVGIVIDLEP ++GD
Sbjct: 61 FTPSSARALEKAAMAPDISLMNPIWVHSQYTG--KPFNAIVHRIDVGIVIDLEPLRTGDA 118
Query: 203 ALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHG 262
A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HG
Sbjct: 119 AMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHG 178
Query: 263 EVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPL 322
EVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMI DC A PV VIQS+EL+QPL
Sbjct: 179 EVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIFDCSATPVKVIQSEELRQPL 238
Query: 323 CLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKLWGLVVCHHT 372
CLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKLWGLVVCHHT
Sbjct: 239 CLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGLSGRSSMKLWGLVVCHHT 298
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
SPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDAP IVT
Sbjct: 299 SPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVT 358
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
QSPSIMDLVKCDGAALYYG W +GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AG
Sbjct: 359 QSPSIMDLVKCDGAALYYGCTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLSTDSLADAG 418
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGAA LG AVCGMA ARITSKD+LFW+RSHTAKE+KWGGAKHHP+ KD+G +MHPRSSF
Sbjct: 419 YPGAASLGDAVCGMAAARITSKDYLFWYRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSF 478
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DE
Sbjct: 479 KAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDSDTKTMVHARLNDLKLQGIDE 537
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
LSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL+ ++V EES
Sbjct: 538 LSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHDLVLEES 597
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 598 AECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 638
>gi|371940266|dbj|BAL45570.1| truncate phytochrome A2 protein [Glycine max]
Length = 894
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/867 (52%), Positives = 607/867 (70%), Gaps = 28/867 (3%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGC 98
DA L A FE+S +S + R + +GV + + TAYL +Q+G +IQPFGC
Sbjct: 27 TVDAKLHATFEESGSSFDYSSSVR-ISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPFGC 85
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LA++E T ++I YSEN EML + S + D G IG D +TLFT PS ++L KA
Sbjct: 86 LLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSASALQKA 144
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
E+ LLNP+L+H + KPFYAI+HR+ ++ID EP K + ++ AGA+QS K
Sbjct: 145 LGFAEVLLLNPVLIHCKTSG--KPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FH+DDHGEV++EI + LE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L STLR+PH
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLVMAV++N + +LWGLVVCH+T+PR++PFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ + E+++ Q+ EKNILRTQ LLCD+++RDAP IV++SP+IMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+ESQ+++IA+WL H D TG STDSL++AG+P A LG
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA R+T+KD +FWFRSHTA E++WGGAKH KD+G +MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVR 622
S PW+ EI+A+HSLQ+++R++F++ E + + NT+ + K++G+ EL +V E+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 623 LIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICR 682
LIETAT PI VD G +NGWN K+AELTGLP EAMGK L+ +V + S V+ ++
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLL-TLVEDSSTDRVKKMLNL 681
Query: 683 ALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMD 742
ALLGEE+KNV+ +++ + + ++VNAC SRD ++NV GVCFV DIT +K +MD
Sbjct: 682 ALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMD 741
Query: 743 KFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF 802
KF R++GDY+AI+Q+ NPLIPPIF +DE C EWN AM K+TGW R EV+ KML E+F
Sbjct: 742 KFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELF 801
Query: 803 GNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEG 859
G CR+K Q+ ++L + +TG TE PFGFF R G++VE L+ S++ D EG
Sbjct: 802 GTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEG 861
Query: 860 KVIGCFCFMQILVPDLQPALEAQGLED 886
V G FCF+Q+ P+LQ AL Q L +
Sbjct: 862 LVTGVFCFLQLASPELQQALHIQRLSE 888
>gi|406685449|gb|AFS51165.1| phytochrome P, partial [Agathis robusta]
Length = 655
Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/660 (69%), Positives = 531/660 (80%), Gaps = 33/660 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR-------SRSEDFELNG- 133
AYLS++QRGG IQPFGCMLAVEE TFRII YSEN LEMLDL R E +G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 134 ----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
IG D R LFTP S +L KAA ++EISL+NPI VHS ++ KPFYAI+HRIDVG
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHS--QNTNKPFYAIVHRIDVG 118
Query: 190 IVIDLEPSKSGDPALSLAG-----AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
+VIDLEP ++G +AG +VQSQKLAV AISRLQ+ GDIG+LCDTVVEDV++
Sbjct: 119 MVIDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRE 176
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 177 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 236
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---- 360
C A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 237 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 296
Query: 361 -------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILR 413
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQVA QL EK+ILR
Sbjct: 297 SGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILR 356
Query: 414 TQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWL 473
TQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WL
Sbjct: 357 TQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWL 416
Query: 474 LNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGA 533
L HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGA
Sbjct: 417 LEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGA 476
Query: 534 KHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEND 593
KHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N
Sbjct: 477 KHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN- 535
Query: 594 SKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGL 653
+K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVAELTGL
Sbjct: 536 TKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGL 595
Query: 654 PASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
P EAMGKSL+ +++ ES V+ ++CRAL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 596 PVGEAMGKSLVHDLIFHESADTVDKMLCRALRGEEEKNVEIKLRTFGPQKQKKAIYLVVN 655
>gi|406685265|gb|AFS51073.1| phytochrome P, partial [Amentotaxus poilanei]
Length = 674
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/678 (67%), Positives = 534/678 (78%), Gaps = 37/678 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLD----------LRSRSEDFEL 131
AYLS++QRGG IQPFGCMLAVEE +F+II YSEN LEMLD + R D +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSVSNMEGRGGDSDG 60
Query: 132 NGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIV 191
IG D R LFTP SG +L +AA ++EISL NPI + SNS KPFYAI+HRIDVGIV
Sbjct: 61 FLTIGSDMRRLFTPSSGRNLERAAMAQEISLTNPIAMESNS---GKPFYAIVHRIDVGIV 117
Query: 192 IDLEPSKSGDPALSLAGA-------VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
I LEP + GD A ++ A V SQ+LAV A SRLQ++P GDIGLLCDTVVE+V++
Sbjct: 118 IGLEPVRRGDAAALVSWAGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRE 177
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 178 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 237
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----- 359
C A PV V Q++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 CRATPVKVKQAEELKQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIVNGNGIDEDG 297
Query: 360 -----------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
S+KLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E
Sbjct: 298 VSGSGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIE 357
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG WL+GVTPTE+QLKD
Sbjct: 358 NSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLKD 417
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
IA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT KDFLFWFRSHTAKE+
Sbjct: 418 IADWLLECHGDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITLKDFLFWFRSHTAKEM 477
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RSFPWE E++AIHSLQ+++R SFQ++
Sbjct: 478 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDI 537
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
+++D+K + + N K+QG+DELSSVA EMVRLIETATAPI VDSSG +NGWNAKV
Sbjct: 538 -DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVG 596
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGLP EAMGKSL+ ++V EES VE ++ AL GEE+KNVE+KLR F QKQ V+
Sbjct: 597 ELTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVI 656
Query: 709 YILVNACTSRDYKNNVKG 726
Y+++NAC+SRDY + + G
Sbjct: 657 YLVINACSSRDYTDKIVG 674
>gi|218683911|gb|ACL00910.1| phytochrome D [Capsella bursa-pastoris]
Length = 658
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/658 (66%), Positives = 528/658 (80%), Gaps = 17/658 (2%)
Query: 181 AILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVE 240
AILHR+DVGI+IDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVV+
Sbjct: 1 AILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVD 60
Query: 241 DVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVR 300
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA IPQA+RFLFKQNRVR
Sbjct: 61 SVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATGIPQASRFLFKQNRVR 120
Query: 301 MICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS--- 357
MI DCHA PV V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 MIVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEE 180
Query: 358 -----------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQL 406
++SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q+
Sbjct: 181 DGNGVNSNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQV 240
Query: 407 AEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQL 466
+EK +LR Q LLCDMLLRD+P IVTQ PSIMDLVKC+GAA Y G+ + +GV PTE+Q+
Sbjct: 241 SEKRVLRMQTLLCDMLLRDSPAGIVTQKPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQI 300
Query: 467 KDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAK 526
DI W+L NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHT K
Sbjct: 301 NDIVKWVLGNHSDSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEK 360
Query: 527 EVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ 586
E+KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+R PWE +E++AIHSLQ+++RDSF+
Sbjct: 361 EIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFK 420
Query: 587 EMEEEND-SKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGW 643
E E N + G Q +G M QG+ E+ +VA EMVRLIETAT PIF VD G INGW
Sbjct: 421 ESEAMNSKAAAAGALQPHGEAMAEQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGW 480
Query: 644 NAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQK 703
NAK+AELTGL A EAMGKSL+ +++++E + V+ L+ AL G E KNVE+KL+ F L+
Sbjct: 481 NAKIAELTGLSAEEAMGKSLVRDLIYKEYEETVDRLLSCALKGGESKNVEVKLQTFGLEL 540
Query: 704 QHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIP 763
Q V+++VN C+S+DY NN+ GVCFVGQD+T K++MDKF+ +QGDY+AII S NPLIP
Sbjct: 541 QGKAVFVVVNPCSSKDYLNNIVGVCFVGQDVTGHKIVMDKFVNIQGDYKAIIHSPNPLIP 600
Query: 764 PIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
PIFA+DEN CC EWN AMEK+TGW R EVIGK+L RE+FG+ CR+KG D LTKFMI+L
Sbjct: 601 PIFAADENICCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 658
>gi|130186|sp|P19862.1|PHYA1_MAIZE RecName: Full=Phytochrome A
gi|29293912|gb|AAO73469.1| phytochrome A2 [Zea mays]
gi|129560387|gb|ABO30572.1| phytochrome A2 [Zea mays]
gi|413933241|gb|AFW67792.1| phytochrome A [Zea mays]
Length = 1131
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/940 (49%), Positives = 626/940 (66%), Gaps = 38/940 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ-----ITAYLSKIQRGGL 92
I+ DA L AE+E+S G SF+YS+ V + PE+Q + AYL IQRG L
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKL 80
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPGA 139
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AG
Sbjct: 140 TALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAG 197
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AIS++Q+LPGG + LC+TVV++V LTGYDRVM Y FH+D+HGEV +EI
Sbjct: 198 ALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEI 257
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ +EPY+G+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L ST
Sbjct: 258 TKPGIEPYIGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGST 317
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSK---------------DSMKLWGLVVCHHTS 373
LR+PH CHL+YM NM SIASLVMAV++N +LWGL+VCHH S
Sbjct: 318 LRAPHSCHLKYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQQQKKKRLWGLIVCHHES 377
Query: 374 PRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVT 432
PRY+PFPLRYACEFL Q F++ + E ++ Q+ EKNILR Q +L DML +++ P SIV+
Sbjct: 378 PRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKNILRMQTMLSDMLFKESSPLSIVS 437
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +AG
Sbjct: 438 GSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAG 497
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR SF
Sbjct: 498 YPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSF 557
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGVD 611
KAFLEVVK +S PW E++AIHSLQ+++R + + + ++ G Q G K+ G+
Sbjct: 558 KAFLEVVKTKSLPWSDYEMDAIHSLQLILRGTLNDASKP--AQASGLDNQIGDLKLDGLA 615
Query: 612 ELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEE 671
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 616 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDS 674
Query: 672 SQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVG 731
S V+ ++ AL G E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 675 SVSLVQRMLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVA 734
Query: 732 QDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHE 791
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWNAAM K+TGW R E
Sbjct: 735 QDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDE 794
Query: 792 VIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVA 848
V+ KML E+F + C +K +D + I++ + G+ E FGFF+R ++VE
Sbjct: 795 VVDKMLLGEVFNSSNASCLLKSKDAFVRLCIVINSALAGEEAEKASFGFFDRNEKYVECL 854
Query: 849 LTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLN 908
L+ +R+ +A+G V G FCF+ + DLQ AL Q + K+K +Y+R + PL+
Sbjct: 855 LSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRKLKAFSYMRHAINKPLS 914
Query: 909 GIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
G+ + + L+S+ ++E Q + + D C RQ+ I+ +D
Sbjct: 915 GMLYSRETLKSTGLNEEQMRQVRVGDNCHRQLNKILADLD 954
>gi|406685263|gb|AFS51072.1| phytochrome P, partial [Amentotaxus formosana]
Length = 676
Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/680 (67%), Positives = 535/680 (78%), Gaps = 39/680 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLD----------LRSRSEDFEL 131
AYLS++QRGG IQPFGCMLAVEE +F+II YSEN LEMLD + R D +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSVSNMEGRGGDSDG 60
Query: 132 NGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIV 191
IG D R LFTP SG +L +AA ++EISL NPI + SNS KPFYAI+HRIDVG+V
Sbjct: 61 FLTIGSDMRRLFTPSSGRNLERAAMAQEISLTNPIAMESNS---GKPFYAIVHRIDVGMV 117
Query: 192 IDLEPSKSGDPALSLAGA-------VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
IDLEP + GD A ++ A V SQ+LAV A SRLQ++P GDIGLLCDTVVE+V++
Sbjct: 118 IDLEPVRRGDAAALVSWAGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRE 177
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 178 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 237
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSK------ 358
C A PV V Q++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 CCATPVKVKQAEELKQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIVNGNGIDEDG 297
Query: 359 ------------DSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQL 406
S+KLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL
Sbjct: 298 VSGSESGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQL 357
Query: 407 AEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQL 466
E +ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG WL+GVTPTE+QL
Sbjct: 358 IENSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQL 417
Query: 467 KDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAK 526
KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT KDFLFWFRSHTAK
Sbjct: 418 KDIADWLLECHGDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITLKDFLFWFRSHTAK 477
Query: 527 EVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQ 586
E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RSFPWE E++AIHSLQ+++R SFQ
Sbjct: 478 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQ 537
Query: 587 EMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
++ +++D+K + + N K+QG+DELSSVA EMVRLIETATAPI VDSSG +NGWNAK
Sbjct: 538 DI-DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAK 596
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
V ELTGLP EAMGKSL+ ++V EES VE ++ AL GEE+KNVE+KLR F QKQ
Sbjct: 597 VGELTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKK 656
Query: 707 VVYILVNACTSRDYKNNVKG 726
V+Y+++NAC+SRDY + + G
Sbjct: 657 VIYLVINACSSRDYTDKIVG 676
>gi|406685267|gb|AFS51074.1| phytochrome P, partial [Amentotaxus yunnanensis]
Length = 674
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/678 (67%), Positives = 534/678 (78%), Gaps = 37/678 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLD----------LRSRSEDFEL 131
AYLS++QRGG IQPFGCMLAVEE +F+II YSEN LEMLD + R D +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSVSNMEGRGGDSDG 60
Query: 132 NGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIV 191
IG D R LFTP SG +L +AA ++EISL NPI + SNS KPFYAI+HRIDVGIV
Sbjct: 61 FLTIGSDMRRLFTPSSGRNLERAAMAQEISLTNPIAMESNS---GKPFYAIVHRIDVGIV 117
Query: 192 IDLEPSKSGDPALSLAGA-------VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
IDLEP + GD A ++ A V SQ+LAV A SRLQ++P GDIGLLCDTVVE+V++
Sbjct: 118 IDLEPVRRGDAAALVSWAGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRE 177
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 178 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 237
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSK------ 358
C A PV V Q++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 CRATPVKVKQAEELKQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIVNGNGIDEDG 297
Query: 359 ----------DSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
S+KLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E
Sbjct: 298 VSGSGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIE 357
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY GG WL+GVTPTE+QLKD
Sbjct: 358 NSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYCGGMFWLLGVTPTEAQLKD 417
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
IA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT KDFLFWFRSHTAKE+
Sbjct: 418 IADWLLECHGDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITLKDFLFWFRSHTAKEM 477
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RSFPWE E++AIHSLQ+++R SFQ++
Sbjct: 478 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDI 537
Query: 589 EEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
+++D+K + + N K+QG+DELSSVA EMVRLIETATAPI VDSSG +NGWNAKV
Sbjct: 538 -DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVG 596
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGLP EAMGKSL+ ++V EES VE ++ AL GEE+KNVE+KLR F QKQ V+
Sbjct: 597 ELTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVI 656
Query: 709 YILVNACTSRDYKNNVKG 726
Y+++NAC+SRDY + + G
Sbjct: 657 YLVINACSSRDYTDKIVG 674
>gi|37926849|gb|AAP06787.1| phytochrome A1 apoprotein [Zea mays]
gi|414872502|tpg|DAA51059.1| TPA: phytochromeA1 [Zea mays]
Length = 1131
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/939 (49%), Positives = 624/939 (66%), Gaps = 36/939 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ-----ITAYLSKIQRGGL 92
I+ DA L AE+E+S G SF+YS+ V + PE+Q + AYL IQRG L
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKL 80
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPGA 139
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AG
Sbjct: 140 TALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAG 197
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AIS++Q+LPGG + LC+TVV++V LTGYDRVM Y FH+D+HGEV +EI
Sbjct: 198 ALQSYKLAAKAISKIQSLPGGSMQALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEI 257
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L ST
Sbjct: 258 TKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGST 317
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHTS 373
LR+PH CHLQYM NM SIASLVMAV++N + KLWGL+VCHH S
Sbjct: 318 LRAPHSCHLQYMENMNSIASLVMAVVVNENEDDDEPESEQPPQQQKRKKLWGLIVCHHES 377
Query: 374 PRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVT 432
PRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML +++ P SIV+
Sbjct: 378 PRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKESSPLSIVS 437
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +AG
Sbjct: 438 GSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAG 497
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P +D+ +MHPR SF
Sbjct: 498 YPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDEDDSRRMHPRLSF 557
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK +S PW E++AIHSLQ+++R + + + S N Q K+ G+ E
Sbjct: 558 KAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPAQSSGLDN-QIGDLKLDGLAE 616
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
L +V EMVRL+ETAT PI VD +G +NGWN KVA+L+GL EA+G+ ++ +V + S
Sbjct: 617 LQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVADLSGLRVDEAIGRHIL-TLVEDSS 675
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQ 732
V+ ++ AL G E+K V +L+ ++ V ++VNAC SRD ++V GVCFV Q
Sbjct: 676 VPIVQRMLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDMHDHVVGVCFVAQ 735
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
D+T K++MDKF R++GDY AII + NPLIPPIF +D+ CSEWNAAM K+TGW R EV
Sbjct: 736 DMTVHKLVMDKFTRVEGDYRAIIHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDEV 795
Query: 793 IGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVAL 849
I +ML E+F + C +K +D + I++ + G+ E P GFF+R G+++E L
Sbjct: 796 IDRMLLGEVFDSSNASCLLKSKDAFVRLCIIINSALAGEEAEKAPIGFFDRDGKYIECLL 855
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL+G
Sbjct: 856 SVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTALRRLKAFSYMRHAIDKPLSG 915
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+ + + L+ + + E Q + + +D C RQ+ I+ +D
Sbjct: 916 MLYSRETLKGTDLDEEQMRQVRVADNCHRQLNKILADLD 954
>gi|218683841|gb|ACL00875.1| phytochrome B [Polanisia dodecandra]
Length = 632
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/633 (68%), Positives = 519/633 (81%), Gaps = 14/633 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV A S+LQ+LPGGDI LLCDTVV+ V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAXSQLQSLPGGDIKLLCDTVVQSVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV VIQ + KQP
Sbjct: 61 GEVVAESKRGDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVIQDERFKQP 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCH 370
LCLV STLR+PHGCH QYM NMG++ASL MAVIIN ++SM+LWGLVVCH
Sbjct: 121 LCLVGSTLRAPHGCHAQYMANMGTMASLAMAVIINGNEEDTNSVAGGRNSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKCDGAA Y G+ + +GV P+E+Q+KDI WLL NH D TGLSTDSLA+
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYQGKYYPLGVAPSEAQIKDIVQWLLANHADSTGLSTDSLAD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITRRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM--Q 608
SFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E N +K Q G M Q
Sbjct: 361 SFKAFLEVVKSRSMPWENAEMDAIHSLQLILRDSFKESEAIN-AKAAVRADQPGGAMTVQ 419
Query: 609 GVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVV 668
G+DELS+VA EMVRLIETAT PIF VD G INGWNAK+AELTGL EAMGKSL+ E++
Sbjct: 420 GLDELSAVAREMVRLIETATVPIFAVDVDGRINGWNAKIAELTGLSVEEAMGKSLVHELI 479
Query: 669 HEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVC 728
+EE + VE L+ RAL G+EDKNVE+KL+ F + + V+++V+AC+S+DY NN+ GVC
Sbjct: 480 YEEYEETVEKLLSRALRGDEDKNVEVKLKTFNRELEGKAVFVVVSACSSKDYLNNIVGVC 539
Query: 729 FVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWM 788
FVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN CC EWN AMEK+TGW
Sbjct: 540 FVGQDVTGQKIVMDKFIHIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWS 599
Query: 789 RHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
EVIGKML E+FG+ C++KG D LTKFMI+L
Sbjct: 600 GAEVIGKMLVGEVFGSCCQLKGPDALTKFMIVL 632
>gi|20288|emb|CAA32375.1| phytochrome [Oryza sativa Indica Group]
Length = 1128
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/938 (49%), Positives = 626/938 (66%), Gaps = 34/938 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV-----ISPPEGVPEEQITAYLSKIQRGGL 92
I+ DA L AE+E+ G SF+YS+ V P + E++ AYL IQR L
Sbjct: 24 ILAQTTLDAELNAEYEEY---GDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKL 80
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGA 149
IQPFGC+LA++E TF +I SEN EML S S D IG + R+LFT P
Sbjct: 81 IQPFGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVRSLFTDPGTT 140
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AGA
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAGA 198
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
+QS KLA AIS++Q+LPGG + +LC+TVV+++ LTGYDRVM Y FH+DDHGEV +EI
Sbjct: 199 LQSYKLAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEIT 258
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A + +I+ + L + L STL
Sbjct: 259 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTL 318
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHTSP 374
R+PH CHLQYM NM SIASLVMAV++N + KLWGL+VCHH SP
Sbjct: 319 RAPHSCHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESP 378
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRD-APFSIVTQ 433
RY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DMLLR+ +P SIV+
Sbjct: 379 RYVPFPLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSG 438
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
+P+IMDLVKCDGAAL YGG+ W + PTESQ++DIA+WL + H D TGLSTDSL +AGY
Sbjct: 439 TPNIMDLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGY 498
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGAA LG +CGMA A+I SKD LFWFRSHTA E++WGGAKH P KD+ +MHPR SFK
Sbjct: 499 PGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFK 558
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVVK +S PW E++AIHSLQ+++R + + + + N Q K+ G+ EL
Sbjct: 559 AFLEVVKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDN-QVGDLKLDGLAEL 617
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V EMVRL+ETAT PI VDS+G +NGWN KVAELTGL EA+G+ ++ V E S
Sbjct: 618 QAVTSEMVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHILTVVE-ESSV 676
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ AL G+E+K V+ +++ ++ V ++VNAC SRD ++V GVCFV QD
Sbjct: 677 PVVQRMLYLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 736
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
+T K++MDKF R++GDY+AII + +PLIPPIF +DE CSEWNAAM K+TGW R EVI
Sbjct: 737 MTVHKLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVI 796
Query: 794 GKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML E+F + C +K +D IL+ + G TE PF FF+R G+++E L+
Sbjct: 797 NKMLLGEVFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLS 856
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
+R+ +A+G + G FCF+Q+ +LQ AL Q + K+K +Y+R + NPL+G+
Sbjct: 857 VNRKVNADGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGM 916
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+ K L+++ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 917 LYSRKALKNTGLNEEQMKEVNVADSCHRQLNKILSDLD 954
>gi|351722971|ref|NP_001238286.1| phytochrome A [Glycine max]
gi|1172495|sp|P42500.1|PHYA_SOYBN RecName: Full=Phytochrome A
gi|515749|gb|AAA33957.1| phytochrome A [Glycine max]
gi|515751|gb|AAA33999.1| phytochrome A [Glycine max]
Length = 1131
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/945 (49%), Positives = 633/945 (66%), Gaps = 37/945 (3%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAV 102
DA + A FE+S +S + R V +GV + + + RG +IQPFGC+LA+
Sbjct: 26 TVDAKIHATFEESGSSFDYSSSVR-VSGTADGVNQPRSDKVTTAYLRGKMIQPFGCLLAI 84
Query: 103 EEP----TFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+E T ++I YSEN EML + S + D G IG D +TLFT PS + L KA
Sbjct: 85 DEKNHMQTCKVIAYSENEPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSVSGLQKA 143
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
++SLLNPILVH + KPFYAI+HR+ +++D EP K + ++ AGA+QS K
Sbjct: 144 LGCADVSLLNPILVHCKTSG--KPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYK 201
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G++ LCDT+V++V +LTGYDRVM Y FH+DDHGEV+ EI + LE
Sbjct: 202 LAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIREITKPCLE 261
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF++N+VRMI DCHA V V+Q ++L+ L L STLR+PH
Sbjct: 262 PYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHS 321
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLV+AV++N + + +LWGLVVCH+T+PR++PFPLR
Sbjct: 322 CHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKTERLWGLVVCHNTTPRFVPFPLR 381
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YA EFL Q F+ ++ E+++ Q+ EKNIL L ML+RDAP I ++SP+IMDLVK
Sbjct: 382 YAREFLPQVFADHVHKEIELEYQIIEKNILHHPGHLLCMLMRDAPLGIASESPNIMDLVK 441
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+E Q+++IA WL H D T STDSL +AG+P A LG
Sbjct: 442 CDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTSFSTDSLFDAGFPSALSLGDV 501
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA+ R+T+KD +FWFRSHTA E++WGGAKH KD+ +MHPRSSFKAFLEVVK R
Sbjct: 502 VCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKAR 561
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG-NTQQNGSKMQGVD--------EL 613
S PW+ E++AIHSLQI++R++F+E E D + NT+ K++G++ EL
Sbjct: 562 SLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLRDLKIEGINDLKIERMQEL 621
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V E+VRL TAT PI VD G +NGWN K+AELTGLP EA GK L+ +V + S
Sbjct: 622 EAVTSEIVRLDYTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLL-TLVEDSST 680
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ ALLGEE+KNV+ +++ + + ++VN C SRD ++NV GVCFV D
Sbjct: 681 DRVKKMLNLALLGEEEKNVQFEIKTLGSKMDSGPISLVVNRCASRDLRDNVVGVCFVAHD 740
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
IT +K +MDKFIR++GDY+AI+Q+ NPLIPPIF +DE C EWN AM K+TGW R EV+
Sbjct: 741 ITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEVM 800
Query: 794 GKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML EIFG CR+K Q+ ++L + +TG TE PFGFF R G++VE L+
Sbjct: 801 DKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLLS 860
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
S++ D EG V G FCF+Q+ P+LQ AL Q L + ++ L+Y++++++NPL GI
Sbjct: 861 VSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCGI 920
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F K+LE + + Q+Q L TS C++Q+ I+D DL I +G
Sbjct: 921 VFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDG 965
>gi|327342194|gb|AEA50884.1| phyB1 [Populus tremula]
Length = 695
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/657 (68%), Positives = 531/657 (80%), Gaps = 14/657 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS SGKSF+YS+SV + + VPEEQITAYLSKIQRGG IQPFGC
Sbjct: 41 IAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQSVPEEQITAYLSKIQRGGHIQPFGC 100
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGLI--GIDARTLFTPPSGASLAKAA 155
M+AV+E +FR+I YSEN EML +S + ++ G D RTLF P S A L KA
Sbjct: 101 MIAVDEGSFRVIAYSENAKEMLGFTPQSVPSLDKQEILSDGTDVRTLFRPSSSAMLEKAF 160
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
+REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQKL
Sbjct: 161 GAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKL 218
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
AV +IS+LQ+LPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E +R+DLEP
Sbjct: 219 AVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAENKRADLEP 278
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
Y+G+H+P+ DIPQA+RFLFKQNRVRMI DCHA PV VIQ + L QPLCLV STLR+PHGC
Sbjct: 279 YIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVRVIQDEALMQPLCLVGSTLRAPHGC 338
Query: 336 HLQYMTNMGSIASLVMAVIINS--------KDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
H QYM NMGSIAS+ MAVIIN ++S +LWGLVVCHHTS R IPFPLRYACEF
Sbjct: 339 HAQYMANMGSIASMAMAVIINGNEEEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEF 398
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA
Sbjct: 399 LMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAA 458
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY G+ + GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 459 LYYQGQYYPSGVTPTEAQIKDIVEWLLALHGDSTGLSTDSLADAGYPGAASLGNAVCGMA 518
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS WE
Sbjct: 519 VAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLLWE 578
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
+E++AIHSLQ+++RDSF++ E N SK TQ +++QG+DELSSVA EMVRLIETA
Sbjct: 579 NAEMDAIHSLQLILRDSFRDAEATN-SKAVVRTQLEDTELQGMDELSSVAREMVRLIETA 637
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
TAPIF VD G INGWNAKVAELTGL AMGKSL+ ++V++E + V+ L+ RAL
Sbjct: 638 TAPIFAVDVDGCINGWNAKVAELTGLSVERAMGKSLVHDLVYKEYEETVDKLLHRAL 694
>gi|406685443|gb|AFS51162.1| phytochrome P, partial [Agathis montana de Laub. 1969]
Length = 659
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/664 (69%), Positives = 530/664 (79%), Gaps = 37/664 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR-------SRSEDFELNG- 133
AYLS++QRGG IQPFGCMLAVEE TFRII YSEN LEMLDL R E +G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 134 ----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
IG+D R LFTP S +L KAA ++EISL+NPI VHS ++ KPFYAI+HRIDVG
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHS--QNTNKPFYAIVHRIDVG 118
Query: 190 IVIDLEPSKSGDPALSLAG-----AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
+VIDLEP ++G +AG +VQSQKLAV AISRLQ+ GDIG+LCDTVVEDV++
Sbjct: 119 MVIDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRE 176
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 177 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 236
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---- 360
C A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 237 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDQGGG 296
Query: 361 -----------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEK 409
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQVA QL EK
Sbjct: 297 SGGRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEK 356
Query: 410 NILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDI 469
+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDI
Sbjct: 357 HILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDI 416
Query: 470 AWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVK 529
A WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+K
Sbjct: 417 ADWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMK 476
Query: 530 WGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME 589
WGGAKHHP+ KD+ +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ+++
Sbjct: 477 WGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID 536
Query: 590 EENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAE 649
+ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVAE
Sbjct: 537 DSN-TKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 595
Query: 650 LTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVY 709
LTGLP EAMGKSL+ +++ ES V+ ++C AL GEE+KNVE+KLR F QKQ +Y
Sbjct: 596 LTGLPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIY 655
Query: 710 ILVN 713
++VN
Sbjct: 656 LVVN 659
>gi|218683859|gb|ACL00884.1| phytochrome B [Camelina microcarpa]
Length = 634
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/634 (68%), Positives = 520/634 (82%), Gaps = 14/634 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV+V+Q L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-----------SMKLWGLVVCH 370
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN D SM+LWGLVVCH
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNDEDGSNVASGRSSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E+ +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEERVLRTQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKCDGAA Y G+ + +GV P+E+Q++D+ WLL NH D TGLSTDSL +
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEAQIRDVVEWLLANHADSTGLSTDSLGD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK-VQGNTQ--QNGSKM 607
SFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E +SK V G Q ++ S
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTVDGAVQPYKDMSGE 420
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ ++
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDL 480
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
+++E++ V L+ RAL G+E+KNVE+KL+ F + Q V+++VNAC+S+DY NN+ GV
Sbjct: 481 IYKENEETVSKLLSRALRGDEEKNVEVKLKTFSSELQGKAVFVVVNACSSKDYLNNIVGV 540
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CFV QD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN CC EWN AMEK+TGW
Sbjct: 541 CFVAQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGW 600
Query: 788 MRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGKML E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 SRSEVIGKMLVGEVFGSCCRLKGPDALTKFMIVL 634
>gi|218683903|gb|ACL00906.1| phytochrome D [Arabidopsis kamchatica]
Length = 655
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/655 (66%), Positives = 529/655 (80%), Gaps = 15/655 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHR+DVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDT+VE
Sbjct: 1 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTLVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV V+Q + L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCHASPVRVVQDERLTQSICLVGSTLRAPHGCHAQYMANMGSIASLGMAVIINGNEED 180
Query: 358 --------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEK 409
++SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GNGVNVGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEK 240
Query: 410 NILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDI 469
+LR Q LLCDMLLRD+P IVTQ+PSIMDLVKC+GAA Y G+ + +GV PTE+Q+ I
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQNPSIMDLVKCNGAAFLYHGKYYSLGVAPTEAQINYI 300
Query: 470 AWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVK 529
WLL NH D TGLSTDSL +AGYP AA LG AVCGMA A IT +DFLFWFRSH+ KE+K
Sbjct: 301 VEWLLANHSDSTGLSTDSLGDAGYPQAAALGNAVCGMAVAYITKRDFLFWFRSHSEKEIK 360
Query: 530 WGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME 589
WGGAKHHP+ KD+G +MHPRSSFKAFLEVVK+R PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 WGGAKHHPDDKDDGQRMHPRSSFKAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKEAE 420
Query: 590 E-ENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
++ + G Q +G M QG++E+ +VA EMVRLIETAT PI VD G INGWNAK
Sbjct: 421 AMDSKAAAAGEVQPHGQDMAEQGMEEIGAVAREMVRLIETATVPILAVDRDGCINGWNAK 480
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
+AELTGL EAMGKSL+ +++H+E + V+ L+ AL G+EDKNVE+KL+ F + Q
Sbjct: 481 IAELTGLSVEEAMGKSLVRDLIHKEYEETVDRLLSSALKGDEDKNVEVKLKTFGSELQGK 540
Query: 707 VVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIF 766
V+++VNAC+S+ NNV GVCFVGQD+T EK++MDKF+ +QGDY+AII S NPLIPPIF
Sbjct: 541 AVFLVVNACSSKVQLNNVVGVCFVGQDVTGEKIVMDKFVDIQGDYKAIIHSPNPLIPPIF 600
Query: 767 ASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
A+DEN CC EWN AMEK+TGW R EVIGK+L RE+FG+ CR+KG D LTKFMI+L
Sbjct: 601 AADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 655
>gi|218683891|gb|ACL00900.1| phytochrome B [Sisymbrium altissimum]
Length = 633
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/633 (68%), Positives = 518/633 (81%), Gaps = 13/633 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E RR DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV+V+Q L Q
Sbjct: 61 GEVVAESRREDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCH 370
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN + SM+LWGLVVCH
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGTNVAGGRSSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A++++EK +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALRMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKC+GAA Y G+ + +GV PTE+Q+K+I WLL NH D TGLSTDSL +
Sbjct: 241 VTQSPSIMDLVKCNGAAFLYHGKYYPLGVAPTEAQIKEIVEWLLANHADSTGLSTDSLGD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A IT KDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV-QGNTQQNG-SKMQ 608
SFKAFL VVK+RS PWE +E++AIHSLQ+++RDSF+E E +SK G Q G + Q
Sbjct: 361 SFKAFLGVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGAVQPLGMAGEQ 420
Query: 609 GVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVV 668
G+DEL +VA MVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ +++
Sbjct: 421 GIDELGAVARGMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLI 480
Query: 669 HEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVC 728
++E++ V+ LI RAL G+EDKNVE+KL+ F + Q V+++VNAC+S+DY NN+ GVC
Sbjct: 481 YKENEETVDKLIARALRGDEDKNVEIKLKTFTPELQGKAVFVVVNACSSKDYSNNIVGVC 540
Query: 729 FVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWM 788
FVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN CC EWN AMEK+TGW
Sbjct: 541 FVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWS 600
Query: 789 RHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGKML E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 RSEVIGKMLVGEVFGSCCRLKGPDALTKFMIVL 633
>gi|218683871|gb|ACL00890.1| phytochrome B [Aethionema oppositifolium]
Length = 634
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/634 (67%), Positives = 517/634 (81%), Gaps = 14/634 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E RR DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV+V+Q L Q
Sbjct: 61 GEVVAESRRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCH 370
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN ++SM+LWGLVVCH
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVAGGRNSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKCDGAA Y G+ + +GV PTE Q+KD+ WLL NH D TGLSTDSL +
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEVQIKDVVEWLLANHADSTGLSTDSLGD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM--- 607
SFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E +S+ Q +
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSRTADGAVQPCRDVGGE 420
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+DEL +VA EMVRLIETAT PIF VD+ G +NGWNAK+AELTGL EAMGKSL+ ++
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDAGGCVNGWNAKIAELTGLSVEEAMGKSLVSDL 480
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
+++E++ V+ LI RAL G+EDKNVE+KL+ F + + V+++VNAC+S+DY NN+ GV
Sbjct: 481 IYKENEETVDKLISRALRGDEDKNVEVKLKTFSPEPEGKAVFVVVNACSSKDYLNNIVGV 540
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN CC EWN AMEK+TGW
Sbjct: 541 CFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGW 600
Query: 788 MRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R E IGKML E+FG+ C++KG D LTKFMI+L
Sbjct: 601 SRGEAIGKMLVGEVFGSCCKLKGPDALTKFMIVL 634
>gi|406685441|gb|AFS51161.1| phytochrome P, partial [Agathis macrophylla]
Length = 655
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/660 (69%), Positives = 528/660 (80%), Gaps = 33/660 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR-------SRSEDFELNG- 133
AYLS++QRGG IQPFGCMLAVEE TFR+I YSEN LEMLDL R E +G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRVIAYSENALEMLDLMPQSVPNMDREEAMGSHGG 60
Query: 134 ----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
IG D R LFTP S +L KAA ++EISL+NPI VHS ++ KPFYAI+HRIDVG
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHS--QNTNKPFYAIVHRIDVG 118
Query: 190 IVIDLEPSKSGDPALSLAG-----AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
+VIDLEP ++G + G +VQSQKLAV AISRLQ+ GDIG+LCDTVVEDV++
Sbjct: 119 MVIDLEPVRTGSGGGGVGGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRE 176
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 177 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 236
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---- 360
C A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 237 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 296
Query: 361 -------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILR 413
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQVA QL EK+ILR
Sbjct: 297 SGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILR 356
Query: 414 TQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWL 473
TQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WL
Sbjct: 357 TQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWL 416
Query: 474 LNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGA 533
L HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFW RSHTAKE+KWGGA
Sbjct: 417 LEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWLRSHTAKEMKWGGA 476
Query: 534 KHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEND 593
KHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N
Sbjct: 477 KHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN- 535
Query: 594 SKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGL 653
+K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVAELTGL
Sbjct: 536 TKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGL 595
Query: 654 PASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
P EAMGKSL+ +++ ES V+ ++C AL GEE+KN+E+KLR F QKQ +Y++VN
Sbjct: 596 PVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNIEIKLRTFGPQKQKRAIYLVVN 655
>gi|39777259|gb|AAR30899.1| phytochrome A [Sorghum propinquum]
Length = 1131
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/941 (48%), Positives = 625/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA +E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLAFDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
YPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 RYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ E FG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAQFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>gi|218683889|gb|ACL00899.1| phytochrome B [Thlaspi perfoliatum]
Length = 634
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/634 (68%), Positives = 516/634 (81%), Gaps = 14/634 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E RR DLEPY+G+H+PA DIPQA+RFL KQNRVRMI DCHA PV+V+Q L Q
Sbjct: 61 GEVVAESRRDDLEPYIGLHYPATDIPQASRFLSKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCH 370
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN ++SM+LWGLVVCH
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNKDDGSNVAGGRNSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKCDGAA Y G+ + +GV PTE Q+KD+ WLL NH D TGLSTDSL +
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEVQIKDVVGWLLANHADSTGLSTDSLGD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM--- 607
SFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E +SK Q M
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGAVQPCRDMAGE 420
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMG+SL+ ++
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGRSLVSDL 480
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
+++E++ V+ LI RAL G+EDKNVE+KL+ F + Q V+++VNAC+S+DY NN+ GV
Sbjct: 481 IYKENEETVDKLISRALGGDEDKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNIVGV 540
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN C EWN AMEK+TGW
Sbjct: 541 CFVGQDVTGQKIVMDKFISIQGDYKAIVHSPNPLIPPIFAADENTSCLEWNTAMEKLTGW 600
Query: 788 MRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGKML E+FG+ CR+KG D LTKFM++L
Sbjct: 601 SRGEVIGKMLVGEVFGSCCRLKGPDALTKFMVVL 634
>gi|406685439|gb|AFS51160.1| phytochrome P, partial [Agathis lanceolata]
Length = 659
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/664 (69%), Positives = 529/664 (79%), Gaps = 37/664 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR-------SRSEDFELNG- 133
AYLS++QRGG IQPFGCMLAVEE TFRII YSEN LEMLDL R E +G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGR 60
Query: 134 ----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
IG+D R LFTP S +L KAA ++EISL+NPI VHS ++ KPFYAI+HRIDVG
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHS--QNTNKPFYAIVHRIDVG 118
Query: 190 IVIDLEPSKSGDPALSLAG-----AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
+VIDLEP ++G +AG +VQSQKLAV AISRLQ+ GDIG+LCDTVVEDV++
Sbjct: 119 MVIDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRE 176
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 177 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 236
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---- 360
C A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 237 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 296
Query: 361 -----------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEK 409
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQVA QL EK
Sbjct: 297 SGGRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEK 356
Query: 410 NILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDI 469
+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDI
Sbjct: 357 HILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDI 416
Query: 470 AWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVK 529
A WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFL WFRSHTAKE+K
Sbjct: 417 ADWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLSWFRSHTAKEMK 476
Query: 530 WGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME 589
WGGAKHHP+ KD+ +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ+++
Sbjct: 477 WGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID 536
Query: 590 EENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAE 649
+ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVAE
Sbjct: 537 DSN-TKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 595
Query: 650 LTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVY 709
LTGLP EAMGKSL+ +++ ES V+ ++C AL GEE+KNVE+KLR F QKQ +Y
Sbjct: 596 LTGLPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIY 655
Query: 710 ILVN 713
+LVN
Sbjct: 656 LLVN 659
>gi|406685451|gb|AFS51166.1| phytochrome P, partial [Agathis silbae]
Length = 655
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/660 (69%), Positives = 527/660 (79%), Gaps = 33/660 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR-------SRSEDFELNG- 133
AYLS++QRGG IQPFGCMLAVEE TFRII YSEN LEMLDL R E +G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 134 ----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
IG D R LFTP S +L KAA ++EISL+NPI VHS + KPFYAI+HRIDVG
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHS--QKTNKPFYAIVHRIDVG 118
Query: 190 IVIDLEPSKSGDPALSLAG-----AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
+VIDLEP ++G + G +VQSQKLAV AISRLQ+ GDIG+LCDTVVEDV++
Sbjct: 119 MVIDLEPVRTGSGGGGVGGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRE 176
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 177 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 236
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---- 360
C A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 237 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 296
Query: 361 -------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILR 413
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MEL+VA QL EK+ILR
Sbjct: 297 SGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELRVAAQLTEKHILR 356
Query: 414 TQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWL 473
TQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WL
Sbjct: 357 TQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWL 416
Query: 474 LNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGA 533
L HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFW RSHTAKE+KWGGA
Sbjct: 417 LEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWLRSHTAKEMKWGGA 476
Query: 534 KHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEND 593
KHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N
Sbjct: 477 KHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN- 535
Query: 594 SKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGL 653
+K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVAELTGL
Sbjct: 536 TKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGL 595
Query: 654 PASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
P EAMGKSL+ +++ ES V+ ++C AL GEE+KN+E+KLR F QKQ +Y++VN
Sbjct: 596 PVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNIEIKLRTFGPQKQKKAIYLVVN 655
>gi|309256333|gb|ADO60994.1| phytochrome b [Helianthus annuus]
Length = 683
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/691 (65%), Positives = 546/691 (79%), Gaps = 18/691 (2%)
Query: 19 TTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEE 78
+TP S+ A++ ++K I Y DA L A +EQS SGKSF+YS+S+ + + + E+
Sbjct: 1 STP--STSARVDSMSKA---IAQYALDARLHAVYEQSGESGKSFDYSQSIKTTTDSIAEQ 55
Query: 79 QITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLI 135
Q+TAYLSKIQRGG IQPFGCM+A++ TFR+I +SEN E L L +S D I
Sbjct: 56 QMTAYLSKIQRGGHIQPFGCMIAIDNTTFRVIAFSENARERLGLAPQSVPSLDKPEILTI 115
Query: 136 GIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLE 195
G D +TLFTP S L +A +REI+LLNP+ VHS + KPFYAILHRIDVGIVIDLE
Sbjct: 116 GTDVKTLFTPSSALLLERAFRAREITLLNPVWVHSKNSG--KPFYAILHRIDVGIVIDLE 173
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P+++ DPALS+AGAVQSQKLAV AIS LQALPGGDI LLCDTVV++V++LTGYDRVM+Y
Sbjct: 174 PARTEDPALSIAGAVQSQKLAVRAISNLQALPGGDIKLLCDTVVQNVRELTGYDRVMVYK 233
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+E +R DL+PY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV V+Q
Sbjct: 234 FHEDEHGEVVAESKRPDLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHANPVRVVQD 293
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------SMKLWGLVV 368
L QPLCLV STLR+PHGCH QYM NMGSIASL +AVIIN + +M LWGLVV
Sbjct: 294 DNLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNEDGASGRGTMGLWGLVV 353
Query: 369 CHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPF 428
CHHTS R IPFPLRYACEFL+QAF LQL +ELQ+A Q+ EK ILRTQ LLCDM+LRD+P
Sbjct: 354 CHHTSARCIPFPLRYACEFLMQAFGLQLNLELQLASQMLEKRILRTQTLLCDMILRDSPT 413
Query: 429 SIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSL 488
IVTQSPSIMDLVKCDGAALYY + + +G+TPTESQ+KDI WL H D TGLSTDSL
Sbjct: 414 GIVTQSPSIMDLVKCDGAALYYQEKYYPLGITPTESQIKDIVEWLSACHTDSTGLSTDSL 473
Query: 489 AEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHP 548
A+AGYPGAA LG AVCGMA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHP
Sbjct: 474 ADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 533
Query: 549 RSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQ 608
RSSF AFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ +EN+SK Q ++
Sbjct: 534 RSSFNAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKD-PDENNSKAVVKVQMEEMGLE 592
Query: 609 GVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVV 668
GVDELSSVA EMVRLIETATAPIF VD G INGWNAK+AELTGL +EAMGKSL+ +++
Sbjct: 593 GVDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVRDLI 652
Query: 669 HEESQGAVENLICRALLGEEDKNVELKLRKF 699
++ES+ V L+ AL GEEDKNVE+KLR F
Sbjct: 653 YKESEETVTKLLDHALQGEEDKNVEIKLRTF 683
>gi|218683931|gb|ACL00919.1| phytochrome D [Pachycladon exile]
Length = 650
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/654 (66%), Positives = 527/654 (80%), Gaps = 18/654 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+V+DLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGVVLDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVR+
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRI 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV V+Q L Q +CLV STLR+PHGCH QYM NM SIASL MAV+IN
Sbjct: 121 IVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMASIASLAMAVMINGNEED 180
Query: 358 --------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEK 409
++SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GNCVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEK 240
Query: 410 NILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDI 469
+LR Q LLCDMLLRD+P IVTQ PSIMDLVKC+GAA Y G+ + +GV PTE+Q+ DI
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDI 300
Query: 470 AWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVK 529
WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHT KE+K
Sbjct: 301 VKWLLANHSDSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIK 360
Query: 530 WGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME 589
WGGAKHHPE KD+G +MHPRSSF+AFLEVVK+R PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 WGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESE 420
Query: 590 EENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+ G Q +G + QG+ E+ +VA EMVRLIETAT PIF V+ G INGWNAK+
Sbjct: 421 ----AAAAGAVQTHGEDIAEQGMQEIGAVAREMVRLIETATVPIFAVNIDGCINGWNAKI 476
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGL EAMGKSL+ +++++E + V+ L+ AL G+E KNVE+KL+ F + Q
Sbjct: 477 AELTGLSVEEAMGKSLVRDLIYKEYEETVDRLLSCALKGDEGKNVEVKLKTFGPELQGKA 536
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
V++++NAC+S+DY NN+ GVCFVGQD+T K++MDKFI +QGDY+AII S NPLIPPIFA
Sbjct: 537 VFVVINACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFA 596
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
+DEN CC EWN AMEK+TGW R EVIGK+L RE+FG+ CR+KG D LTKFMI+L
Sbjct: 597 ADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 650
>gi|115454991|ref|NP_001051096.1| Os03g0719800 [Oryza sativa Japonica Group]
gi|122246800|sp|Q10DU0.1|PHYA_ORYSJ RecName: Full=Phytochrome A
gi|158513187|sp|A2XLG5.2|PHYA_ORYSI RecName: Full=Phytochrome A
gi|21321786|gb|AAM47309.1|AF377946_11 phytochrome A [Oryza sativa Japonica Group]
gi|30578176|dbj|BAC76431.1| phytochrome A [Oryza sativa Japonica Group]
gi|50540697|gb|AAT77854.1| phytochrome [Oryza sativa Japonica Group]
gi|108710785|gb|ABF98580.1| Phytochrome A, putative, expressed [Oryza sativa Japonica Group]
gi|113549567|dbj|BAF13010.1| Os03g0719800 [Oryza sativa Japonica Group]
gi|125587730|gb|EAZ28394.1| hypothetical protein OsJ_12374 [Oryza sativa Japonica Group]
gi|215704150|dbj|BAG92990.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1128
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/938 (49%), Positives = 625/938 (66%), Gaps = 34/938 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV-----ISPPEGVPEEQITAYLSKIQRGGL 92
I+ DA L AE+E+ G SF+YS+ V P + E++ AYL IQR L
Sbjct: 24 ILAQTTLDAELNAEYEEY---GDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKL 80
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGA 149
IQPFGC+LA++E TF +I SEN EML S S D IG + +LFT P
Sbjct: 81 IQPFGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVWSLFTDPGAT 140
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AGA
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAGA 198
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
+QS KLA AIS++Q+LPGG + +LC+TVV+++ LTGYDRVM Y FH+DDHGEV +EI
Sbjct: 199 LQSYKLAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEIT 258
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A + +I+ + L + L STL
Sbjct: 259 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTL 318
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHTSP 374
R+PH CHLQYM NM SIASLVMAV++N + KLWGL+VCHH SP
Sbjct: 319 RAPHSCHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESP 378
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRD-APFSIVTQ 433
RY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DMLLR+ +P SIV+
Sbjct: 379 RYVPFPLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSG 438
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
+P+IMDLVKCDGAAL YGG+ W + PTESQ++DIA+WL + H D TGLSTDSL +AGY
Sbjct: 439 TPNIMDLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGY 498
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGAA LG +CGMA A+I SKD LFWFRSHTA E++WGGAKH P KD+ +MHPR SFK
Sbjct: 499 PGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFK 558
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVVK +S PW E++AIHSLQ+++R + + + + N Q K+ G+ EL
Sbjct: 559 AFLEVVKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDN-QVGDLKLDGLAEL 617
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V EMVRL+ETAT PI VDS+G +NGWN KVAELTGL EA+G+ ++ V E S
Sbjct: 618 QAVTSEMVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHILTVVE-ESSV 676
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ AL G+E+K V+ +++ ++ V ++VNAC SRD ++V GVCFV QD
Sbjct: 677 PVVQRMLYLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 736
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
+T K++MDKF R++GDY+AII + +PLIPPIF +DE CSEWNAAM K+TGW R EVI
Sbjct: 737 MTVHKLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVI 796
Query: 794 GKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML E+F + C +K +D IL+ + G TE PF FF+R G+++E L+
Sbjct: 797 NKMLLGEVFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLS 856
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
+R+ +A+G + G FCF+Q+ +LQ AL Q + K+K +Y+R + NPL+G+
Sbjct: 857 VNRKVNADGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGM 916
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+ K L+++ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 917 LYSRKALKNTGLNEEQMKEVNVADSCHRQLNKILSDLD 954
>gi|406685437|gb|AFS51159.1| phytochrome P, partial [Agathis dammara]
Length = 655
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/660 (69%), Positives = 528/660 (80%), Gaps = 33/660 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR-------SRSEDFELNG- 133
AYLS++QRGG IQPFGCMLAVEE TFRII YSEN LEMLDL R E +G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 134 ----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
IG D R LFTP S +L KAA ++EISL+NPI VHS ++ KPFYAI+HRIDVG
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHS--QNTNKPFYAIVHRIDVG 118
Query: 190 IVIDLEPSKSGDPALSLAG-----AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
+VIDLEP ++G +AG +VQSQKLAV AISRLQ+ GDIG+LCDTVVEDV++
Sbjct: 119 MVIDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRE 176
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 177 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 236
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---- 360
C A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 237 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 296
Query: 361 -------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILR 413
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQVA QL EK+ILR
Sbjct: 297 SGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILR 356
Query: 414 TQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWL 473
TQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPT +Q+KDIA WL
Sbjct: 357 TQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTGAQIKDIADWL 416
Query: 474 LNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGA 533
L HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGA
Sbjct: 417 LEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGA 476
Query: 534 KHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEND 593
KHHP+ KD+ +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N
Sbjct: 477 KHHPDDKDDSRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN- 535
Query: 594 SKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGL 653
+K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVAELTGL
Sbjct: 536 TKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGL 595
Query: 654 PASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
P EAMGKSL+ +++ ES V+ ++C AL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 596 PVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIYLVVN 655
>gi|406685433|gb|AFS51157.1| phytochrome P, partial [Agathis borneensis]
Length = 655
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/660 (69%), Positives = 529/660 (80%), Gaps = 33/660 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR-------SRSEDFELNG- 133
AYLS++QRGG IQPFGCMLAVEE TFRII YSEN LEMLDL R E +G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 134 ----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
IG D R LFTP S +L KAA ++EISL+NPI VHS ++ KPFYAI+HRIDVG
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHS--QNTNKPFYAIVHRIDVG 118
Query: 190 IVIDLEPSKSGDPALSLAG-----AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
+VIDLEP ++G +AG +VQSQKLAV AISRLQ+ GDIG+LCDTVVEDV++
Sbjct: 119 MVIDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRE 176
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 177 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 236
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---- 360
C A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 237 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 296
Query: 361 -------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILR 413
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQVA QL EK+ILR
Sbjct: 297 NGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILR 356
Query: 414 TQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWL 473
TQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WL
Sbjct: 357 TQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWL 416
Query: 474 LNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGA 533
L HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGA
Sbjct: 417 LEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGA 476
Query: 534 KHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEND 593
KHHP+ KD+ +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N
Sbjct: 477 KHHPDDKDDSRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN- 535
Query: 594 SKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGL 653
+K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVAELTGL
Sbjct: 536 TKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGL 595
Query: 654 PASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
P EAMGKSL+ +++ ES V+ ++C AL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 596 PVGEAMGKSLVQDLIFHESADTVDKMLCHALRGEEEKNVEMKLRTFGPQKQKKAIYLVVN 655
>gi|218683881|gb|ACL00895.1| phytochrome B [Lepidium alyssoides]
Length = 634
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/634 (68%), Positives = 515/634 (81%), Gaps = 14/634 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLC+TVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCNTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNR+RMI DCHA PV+V+Q Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRIRMIVDCHATPVLVVQDDRFTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCH 370
+CLV STLR+PH CH QYM NMGSIASL MAVIIN ++SM+LWGLVVCH
Sbjct: 121 MCLVGSTLRAPHRCHSQYMANMGSIASLAMAVIINGIEEDGGNVAGGRNSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q+AEK +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMAEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKCDGAA Y G + +GV PTE Q+KDI WLL NH D TGLSTDSL +
Sbjct: 241 VTQSPSIMDLVKCDGAAFIYHGGYYPLGVAPTEVQIKDIVEWLLANHADSTGLSTDSLGD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITERDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM--- 607
SFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ E +SK Q M
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKDSEAAINSKTADGAVQPFRDMTGE 420
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QGVDEL +VA EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ ++
Sbjct: 421 QGVDELGAVAREMVRLIETATVPIFAVDAGGYINGWNAKIAELTGLSVEEAMGKSLVSDL 480
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
++++++ V+ LI RAL GEEDKNVE+KL+ F + Q V+++VNAC+S+DY NN+ GV
Sbjct: 481 IYKQNEETVDKLISRALRGEEDKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNIVGV 540
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CFVGQDIT +K++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN CC EWN AMEK++GW
Sbjct: 541 CFVGQDITGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLSGW 600
Query: 788 MRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGKML E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 SRSEVIGKMLVGEVFGSSCRLKGPDALTKFMIVL 634
>gi|406685435|gb|AFS51158.1| phytochrome P, partial [Agathis corbassonii]
Length = 659
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/664 (68%), Positives = 529/664 (79%), Gaps = 37/664 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR-------SRSEDFELNG- 133
AYLS++QRGG IQPFGCMLAVEE TFRII YSEN LEMLDL R E +G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 134 ----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
IG+D R LFTP S +L KAA ++EISL+NPI VHS ++ KPFYAI+HRIDVG
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHS--QNTNKPFYAIVHRIDVG 118
Query: 190 IVIDLEPSKSGDPALSLAG-----AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
+VIDLEP ++G +AG +VQSQKLAV AISRLQ+ GDIG+LCDTVVEDV++
Sbjct: 119 MVIDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRE 176
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 177 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 236
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---- 360
C A PV VIQ++ELKQPLCLV STLR+P GCH QYM NMGSIASLVMAV+IN +
Sbjct: 237 CRAAPVKVIQAEELKQPLCLVGSTLRAPRGCHAQYMANMGSIASLVMAVVINGNEDQGGG 296
Query: 361 -----------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEK 409
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQVA QL EK
Sbjct: 297 SGGRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEK 356
Query: 410 NILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDI 469
+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDI
Sbjct: 357 HILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDI 416
Query: 470 AWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVK 529
A WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+K
Sbjct: 417 ADWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMK 476
Query: 530 WGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME 589
WGGAKHHP+ KD+ +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ+++
Sbjct: 477 WGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID 536
Query: 590 EENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAE 649
+ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVAE
Sbjct: 537 DSN-TKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 595
Query: 650 LTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVY 709
LTGLP EAMGKSL+ +++ ES V+ ++C AL GEE+KNVE+KLR F QKQ +Y
Sbjct: 596 LTGLPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIY 655
Query: 710 ILVN 713
++VN
Sbjct: 656 LVVN 659
>gi|406685445|gb|AFS51163.1| phytochrome P, partial [Agathis moorei]
Length = 659
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/664 (68%), Positives = 529/664 (79%), Gaps = 37/664 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR-------SRSEDFELNG- 133
AYLS++QRGG IQPFGCMLAVEE TFRII YS+N LEMLDL R E +G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSDNALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 134 ----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
IG+D R LFTP S +L KAA ++EISL+NPI VHS ++ KPFYAI+HRIDVG
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHS--QNTNKPFYAIVHRIDVG 118
Query: 190 IVIDLEPSKSGDPALSLAG-----AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
+VIDLEP ++G +AG +VQSQKLAV AISRLQ+ GD+G+LCDTVVEDV++
Sbjct: 119 MVIDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDVGVLCDTVVEDVRE 176
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 177 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 236
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---- 360
C A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 237 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDQGGG 296
Query: 361 -----------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEK 409
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQVA QL EK
Sbjct: 297 SGGRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEK 356
Query: 410 NILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDI 469
+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDI
Sbjct: 357 HILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDI 416
Query: 470 AWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVK 529
A WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+K
Sbjct: 417 ADWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMK 476
Query: 530 WGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME 589
WGGAKHHP+ KD+ +MHPRSSFKAFLEV+K RS PWE E++AIHSLQ+++R SFQ+++
Sbjct: 477 WGGAKHHPDDKDDARRMHPRSSFKAFLEVIKRRSLPWENVEMDAIHSLQLILRGSFQDID 536
Query: 590 EENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAE 649
+ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+ INGWNAKVAE
Sbjct: 537 DSN-TKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNALINGWNAKVAE 595
Query: 650 LTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVY 709
LTGLP EAMGKSL+ +++ ES V+ ++C AL GEE+KNVE+KLR F QKQ +Y
Sbjct: 596 LTGLPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIY 655
Query: 710 ILVN 713
++VN
Sbjct: 656 LVVN 659
>gi|218683887|gb|ACL00898.1| phytochrome B [Thlaspi perfoliatum]
Length = 634
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/634 (68%), Positives = 515/634 (81%), Gaps = 14/634 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E R DLEPY+G+H+PA DIPQA RFLFKQNRVRMI DCHA PV+V+Q L Q
Sbjct: 61 GEVVAESGRDDLEPYIGLHYPATDIPQAPRFLFKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCH 370
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN ++SM+LWGLVVCH
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLTMAVIINGNEDDGSNVAGGRNSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKCDGAA Y G+ + +GV PTE Q+KD+ WLL NH D TGLSTDSL +
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEVQIKDVVEWLLANHADSTGLSTDSLGD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM--- 607
SFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E +SK Q M
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGAVQPCRDMAGE 420
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ ++
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDL 480
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
+++E++ V+ LI RAL G+EDKNVE+KL+ F + + V+++VNAC+S+DY NN+ GV
Sbjct: 481 IYKENEETVDKLISRALGGDEDKNVEVKLKTFSPELRGKAVFVVVNACSSKDYLNNIVGV 540
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN C EWN AME++TGW
Sbjct: 541 CFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTSCLEWNTAMERLTGW 600
Query: 788 MRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGKML E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 SRGEVIGKMLVGEVFGSCCRLKGPDALTKFMIVL 634
>gi|218683913|gb|ACL00911.1| phytochrome D [Pachycladon stellatum]
Length = 651
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/655 (66%), Positives = 524/655 (80%), Gaps = 18/655 (2%)
Query: 181 AILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVE 240
AILHR+DVGIV DLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE
Sbjct: 1 AILHRVDVGIVTDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVE 60
Query: 241 DVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVR 300
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVR
Sbjct: 61 SVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVR 120
Query: 301 MICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS--- 357
+I DCHA PV V+Q L Q +CLV STLR+PHGCH QYM NM SIASL MAVIIN
Sbjct: 121 IIVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMASIASLAMAVIINGSEE 180
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
++SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 181 DGNSVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSE 240
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LR Q LLCDMLLRD+P IVTQ PSIMDLVKC+GAA Y G+ + +GV PTE+Q+ D
Sbjct: 241 KRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQIND 300
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
I WLL NH D TGLSTDSL +A YPG A LG AVCGMA A IT +DFLFWFRSHT KE+
Sbjct: 301 IVKWLLANHSDSTGLSTDSLGDASYPGTAALGDAVCGMAVAYITKRDFLFWFRSHTEKEI 360
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+R PWE +E++AIHSLQ+++RDSF+E
Sbjct: 361 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKES 420
Query: 589 EEENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAK 646
E + G Q +G + QG+ E+ +VA EMVRLIETAT PIF VD G INGWNAK
Sbjct: 421 E----AAAAGAVQTHGEDIAEQGMQEIGAVAREMVRLIETATVPIFAVDFDGCINGWNAK 476
Query: 647 VAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHS 706
+AELTGL EAMGKSL+ +++++E + V+ L+ AL G+E K+VE+KL+ F + Q
Sbjct: 477 IAELTGLSVEEAMGKSLVRDLIYKEYEETVDRLLSCALKGDEGKDVEVKLKIFGPELQGK 536
Query: 707 VVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIF 766
V++++NAC+S+DY NN+ GVCFVGQD+T K++MDKFI +QGDY+AII S NPLIPPIF
Sbjct: 537 AVFVVINACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIF 596
Query: 767 ASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
A+DEN CC EWN AMEK+TGW R EVIGK+L RE+FG+ CR+KG D LTKFMI+L
Sbjct: 597 AADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 651
>gi|218683853|gb|ACL00881.1| phytochrome B [Boechera laevigata]
Length = 634
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/634 (68%), Positives = 518/634 (81%), Gaps = 14/634 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLA+ AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAIRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV+V+Q L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLAQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCH 370
+CLV STLR+PHGCH QYM NMGSIAS+ MAVIIN + SM+LWGLVVCH
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASIAMAVIINGNEEDGSNVASGRSSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KDI WLL NH D TGLSTDSL +
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDIVEWLLANHADSTGLSTDSLGD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITERDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK-VQGNTQ--QNGSKM 607
SFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E +SK V G Q ++ +
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTVDGVVQPYRDKAGE 420
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+DEL +VA EMVRLIETAT PIF VDS G INGWNAK+AELTGL EA+GKSL+ ++
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDSGGRINGWNAKIAELTGLSVEEAVGKSLVSDL 480
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
+++E++ V L+ RAL G+EDKNVE+KL+ + Q V+++VNAC+S+DY NN+ GV
Sbjct: 481 IYKENEETVSKLLSRALRGDEDKNVEVKLKTSSPELQGKAVFVVVNACSSKDYLNNIVGV 540
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+ EN CC EWN AMEK+TGW
Sbjct: 541 CFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAAGENMCCLEWNTAMEKLTGW 600
Query: 788 MRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGKML E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 SRSEVIGKMLVGEVFGSCCRLKGPDALTKFMIVL 634
>gi|218683929|gb|ACL00918.1| phytochrome D [Pachycladon exile]
Length = 650
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/654 (66%), Positives = 524/654 (80%), Gaps = 18/654 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHR+DVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVR+
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRI 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV V+Q L Q +CLV STLR+PHGCH QYM NM SIASL MAVIIN
Sbjct: 121 IVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMASIASLAMAVIINGNEED 180
Query: 358 --------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEK 409
++SM+LWGLVVCHHTS R IPFPLRYACEF +QAF LQL MELQ+A+Q++EK
Sbjct: 181 GNCVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFPMQAFGLQLNMELQLALQVSEK 240
Query: 410 NILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDI 469
+LR Q LLCDMLLRD+P IVTQ PSIMDLVKC+GAA Y G+ + +GV PTE+Q+ DI
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDI 300
Query: 470 AWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVK 529
WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHT KE+K
Sbjct: 301 VKWLLANHSDSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIK 360
Query: 530 WGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME 589
WGGAKHHPE KD+G +MHPRSSF+AFLE VK+R PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 WGGAKHHPEDKDDGQRMHPRSSFQAFLEAVKSRCQPWETAEMDAIHSLQLILRDSFKESE 420
Query: 590 EENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+ G Q +G + QG+ E+ +VA EMVRLIETAT PIF V+ G INGWNAK+
Sbjct: 421 ----AAAAGAVQTHGEDIAEQGMQEIGAVAREMVRLIETATVPIFAVNIDGCINGWNAKI 476
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGL EAMGKSL+ +++++E + V+ L+ AL G+E KNVE+KL+ F + Q
Sbjct: 477 AELTGLSVEEAMGKSLVRDLIYKEYEETVDRLLSCALKGDEGKNVEVKLKTFGPELQGKA 536
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
V++++NAC+S+DY NN+ GVCFVGQD+T K++MDKFI +QGDY+AII S NPLIPPIFA
Sbjct: 537 VFVVINACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFA 596
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
+DEN CC EWN AMEK+TGW R EVIGK+L RE+FG+ CR+KG D LTKFMI+L
Sbjct: 597 ADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 650
>gi|33333480|gb|AAQ11873.1| phytochrome C [Stellaria longipes]
Length = 1114
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/933 (48%), Positives = 625/933 (66%), Gaps = 27/933 (2%)
Query: 44 ADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQITAYLSKIQRGGLIQPFGCM 99
DA L ++FEQS + FNY+ SV ++ VP + +YL K+QRGGLIQ FGC+
Sbjct: 25 VDAQLASDFEQS---ERVFNYTSSVDLNLLASSSDVPSSTVKSYLQKVQRGGLIQSFGCL 81
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGL-IGIDARTLFTPPSGASLAKAAA 156
+A++E F++I YSEN EMLDL + +L L G D TLFT ++L KA
Sbjct: 82 IAIDEKNFKVIAYSENAPEMLDLTPHTVPNIEQLEALTFGTDVATLFTSSGVSALQKAVN 141
Query: 157 SREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLA 216
E++LLNPILVHS + KPFYAILHRI VG+V+DLE + + ++GA+ S KLA
Sbjct: 142 YSELNLLNPILVHSKNSG--KPFYAILHRIKVGLVLDLETVNLAETLVGVSGALMSYKLA 199
Query: 217 VSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPY 276
AIS+LQ+LP +I LLCD +V++V++LTGYDRVM+Y FHDD HGEV+ E L+ Y
Sbjct: 200 AKAISKLQSLPSQNIPLLCDVLVKEVRELTGYDRVMVYKFHDDQHGEVIGESHSPSLDSY 259
Query: 277 LGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCH 336
LG+H+PA DIPQA+RFLF +N+VRMICDC + V VIQ + L QPL L STLR+PHGCH
Sbjct: 260 LGLHYPATDIPQASRFLFLKNKVRMICDCRSPSVKVIQDEALTQPLSLGGSTLRAPHGCH 319
Query: 337 LQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
QYM NMGSIASLVMAV IN+++ + KLWGLVVCHHTS R++P+PLRYACEFL
Sbjct: 320 AQYMANMGSIASLVMAVTINNEEDEVSDRHRTRKLWGLVVCHHTSSRFVPYPLRYACEFL 379
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
VQ F + + E+++A Q+ EK+IL+ Q +LCDML+RD+P +I+TQSP++MDLVKCDGAAL
Sbjct: 380 VQVFGIHINKEVELAAQVREKHILKIQSMLCDMLMRDSPITIITQSPNVMDLVKCDGAAL 439
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
Y + W++G+TP +Q+KDI+ WL HG+ GL TDSL EAGYPGA LG AVCGMA
Sbjct: 440 LYQSKLWVLGITPKSNQIKDISQWLFEYHGNTKGLITDSLKEAGYPGALELGDAVCGMAA 499
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
RI+S++ LFWFRSHTAKE+KWGGAKH P D G MHPRSSF AFL+VVK RS PWE
Sbjct: 500 VRISSEEMLFWFRSHTAKEIKWGGAKHEPGQNDERGIMHPRSSFNAFLDVVKWRSVPWED 559
Query: 569 SEINAIHSLQIVMRDSF---QEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
E+++I+SLQ++ + M + + V G + ++ + E++RLIE
Sbjct: 560 MEMDSIYSLQLIFIKCLVKNKTMSDTSKMIVNVPGVGVGGPLSSALKVEPLTGEVIRLIE 619
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TA PIF VD +G INGWN KVAELTG+P + +G L+D VV E + ++N++ AL
Sbjct: 620 TAAVPIFSVDVTGAINGWNFKVAELTGVPMEQVIGSQLVDVVV-EGTVEVLKNILSSALQ 678
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
G E+KNVE++LR + S V ++VNAC SRD NV G+CFVGQD+T EK ++D+
Sbjct: 679 GTEEKNVEIRLRTLGSHGKTSYVVLVVNACCSRDVDENVTGICFVGQDVTEEKRIVDQIT 738
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN- 804
LQGDY I+++ LIPPIF D+ EWN AM K++G + +G+ML E+F N
Sbjct: 739 ELQGDYSGIMRNPCHLIPPIFLIDDQGVGLEWNDAMAKISGLSKEYTVGRMLIGEVFTNG 798
Query: 805 --FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVI 862
C++K + L + I L + I G+ ++ FGFF+ + + ++ L A+ R +A+ +
Sbjct: 799 NDGCQVKDYETLLRLKIFLSKMIDGEESDKVLFGFFDHRKKCIDALLCATPRFNADRNIT 858
Query: 863 GCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSI 922
G CF+ + P+LQ ++ Q + + + +K+L Y R++V++P+ G+ F LLESS +
Sbjct: 859 GVLCFLHLPSPELQYSIHMQKVSEKAATSTLKKLTYFREQVRSPIKGMAFTRNLLESSEL 918
Query: 923 SENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+ Q+Q L T CE Q+M II+ D+ IEEG
Sbjct: 919 NIEQKQILTTISLCESQLMKIIEDTDIPSIEEG 951
>gi|218683877|gb|ACL00893.1| phytochrome B [Lepidium alyssoides]
Length = 634
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/634 (68%), Positives = 511/634 (80%), Gaps = 14/634 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRNLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R DLEPY+G+H+PA DIPQA+RFL KQNR+RMI DCHA PV+V+Q L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLIKQNRIRMIVDCHATPVLVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCH 370
+CLV STLR+PH CH QYM NMGSIASL MAVIIN ++SM+LWGLVVCH
Sbjct: 121 MCLVGSTLRAPHRCHSQYMANMGSIASLAMAVIINGIEEDGGNVAGGRNSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTSPR IPFPLRYACEFL+QAF LQL MELQ+A+Q+AEK +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSPRCIPFPLRYACEFLMQAFGLQLNMELQLALQMAEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKCDGAA Y G + +GV PTE Q+KDI WLL NH D TGLSTDSL +
Sbjct: 241 VTQSPSIMDLVKCDGAAFIYHGGYYPLGVAPTEVQIKDIVEWLLANHADSTGLSTDSLGD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM--- 607
SFKAFLEVVK+ S PWE +E++AIHSLQ+++RDSF+E E +SK Q M
Sbjct: 361 SFKAFLEVVKSHSQPWETAEMDAIHSLQLILRDSFKESEAAINSKTADGAVQPLRDMTGE 420
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+DEL VA EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ ++
Sbjct: 421 QGIDELGVVAREMVRLIETATVPIFAVDAGGYINGWNAKIAELTGLSVEEAMGKSLVSDL 480
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
+++++ V LI RAL GEEDKNVE+KL+ F + Q V+++VNAC+S+DY NN+ G+
Sbjct: 481 IYKQNGETVIKLISRALRGEEDKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNIIGI 540
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CFVGQD+T +K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK++GW
Sbjct: 541 CFVGQDVTGQKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLSGW 600
Query: 788 MRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGKML E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 PRSEVIGKMLVGEVFGSSCRLKGPDALTKFMIVL 634
>gi|406685447|gb|AFS51164.1| phytochrome P, partial [Agathis ovata]
Length = 659
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/664 (68%), Positives = 528/664 (79%), Gaps = 37/664 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR-------SRSEDFELNG- 133
AYLS++QRGG IQPFGCMLAVEE TFRII YS+N LEMLDL R E +G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSKNALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 134 ----LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVG 189
IG+D R LFTP S +L KAA ++EISL+NPI VHS ++ KPF AI+HRIDVG
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHS--QNTNKPFCAIVHRIDVG 118
Query: 190 IVIDLEPSKSGDPALSLAG-----AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQK 244
+VIDLEP ++G +AG +VQSQKLAV ISRLQ+ GDIG+LCDTVVEDV++
Sbjct: 119 MVIDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRTISRLQS--AGDIGVLCDTVVEDVRE 176
Query: 245 LTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICD 304
LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICD
Sbjct: 177 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 236
Query: 305 CHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---- 360
C A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 237 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDQGGG 296
Query: 361 -----------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEK 409
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQVA QL EK
Sbjct: 297 SGGRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEK 356
Query: 410 NILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDI 469
+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDI
Sbjct: 357 HILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDI 416
Query: 470 AWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVK 529
A WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+K
Sbjct: 417 ADWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMK 476
Query: 530 WGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME 589
WGGAKHHP+ KD+ +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ+++
Sbjct: 477 WGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID 536
Query: 590 EENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAE 649
+ N +K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVAE
Sbjct: 537 DSN-TKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 595
Query: 650 LTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVY 709
LTGLP EAMGKSL+ +++ ES V+ ++C AL GEE+KNVE+KLR F QKQ +Y
Sbjct: 596 LTGLPVGEAMGKSLVHDLIFHESADTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIY 655
Query: 710 ILVN 713
++VN
Sbjct: 656 LVVN 659
>gi|218683947|gb|ACL00927.1| phytochrome D [Stanleya pinnata]
Length = 652
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/653 (67%), Positives = 524/653 (80%), Gaps = 14/653 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVGI+IDLEP+K+ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGILIDLEPAKTDDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEV++E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVIAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA P+ V+Q +L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCHASPLPVVQDDKLTQSICLVGSTLRAPHGCHAQYMANMGSIASLGMAVIINGNEED 180
Query: 358 -----KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNIL 412
++SM+LWGL+VCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +L
Sbjct: 181 GNGGGRNSMRLWGLIVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVL 240
Query: 413 RTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWW 472
R Q LLCDMLLRD+P IVTQSPSIMDLVKC+GAA Y G+ + +GV PTE+Q+ DI W
Sbjct: 241 RMQTLLCDMLLRDSPAGIVTQSPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDIVEW 300
Query: 473 LLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGG 532
LL NH D TGLSTDSL +AGYP AA LG AVCGMA A IT ++FLFWFRSHT KE+KWGG
Sbjct: 301 LLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRNFLFWFRSHTEKEIKWGG 360
Query: 533 AKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEN 592
AKHHPE KD+G +MHPRSSFKAFLEVVK+R PWE E++AIHSLQ+++RDSF+E E
Sbjct: 361 AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRCQPWETPEMDAIHSLQLILRDSFKE-SEAM 419
Query: 593 DSKVQG--NTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVA 648
DSK Q +G M QGV+E+ +VA EMVRLIETAT PIF VD G INGWNAK+A
Sbjct: 420 DSKANAAEAVQPHGENMSEQGVEEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIA 479
Query: 649 ELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVV 708
ELTGL EAMGKSL+ +++++E + V+ L+ AL G+E KNVE+KL+ F Q V
Sbjct: 480 ELTGLSVDEAMGKSLVQDLIYKEYEETVDRLLSGALRGDEVKNVEVKLKTFGPDLQGKAV 539
Query: 709 YILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFAS 768
+++VNAC+S+DY NN+ GVCFVG D+T +K + DKFI +Q DY+AII S NPLIPPIFA
Sbjct: 540 FVVVNACSSKDYLNNIVGVCFVGHDVTCQKTVKDKFINIQRDYKAIIHSPNPLIPPIFAV 599
Query: 769 DENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
DEN CC EWN AMEK+TGW R EVIGK+L RE+FG+ CR+KG D LTKFMI+L
Sbjct: 600 DENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCCRLKGADTLTKFMIVL 652
>gi|218683939|gb|ACL00923.1| phytochrome D [Pachycladon novaezelandiae]
Length = 650
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/654 (66%), Positives = 523/654 (79%), Gaps = 18/654 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHR+DVGIVIDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVR+
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRI 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV V+Q L Q +CLV STLR+PHGCH QYM NM SIASL MAVIIN
Sbjct: 121 IVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMASIASLAMAVIINGSEED 180
Query: 358 --------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEK 409
++SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GNCVNTGGRNSMRLWGLVVCHHTSARGIPFPLRYACEFLMQAFGLQLNMELQLALQVSEK 240
Query: 410 NILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDI 469
+LR Q LLCDMLLRD+P IVTQ PSIMDLVKC+GAA Y G+ + +GV PTE+Q+ DI
Sbjct: 241 RVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDI 300
Query: 470 AWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVK 529
WLL NH D TGLSTDSL +A YPG A LG AVCGMA A IT +DFLFWFRSHT KE+K
Sbjct: 301 VKWLLANHSDSTGLSTDSLGDASYPGTAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIK 360
Query: 530 WGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME 589
WGGAKHHPE KD+G +MHPRSSF+AFLEVVK+R PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 WGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESE 420
Query: 590 EENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+ G Q +G + QG+ E+ +VA EMVRLIETAT PIF VD G INGWNAK+
Sbjct: 421 ----AAAAGAVQTHGEDIAEQGMQEIGAVAREMVRLIETATVPIFAVDFDGCINGWNAKI 476
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGL EAMGKSL+ +++++E + V+ L+ AL G+E K+VE+KL+ F + Q
Sbjct: 477 AELTGLSVEEAMGKSLVRDLIYKEYEETVDRLLSCALKGDEGKDVEVKLKIFGPELQGKA 536
Query: 708 VYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFA 767
V++++NAC+S+DY NN+ GVCFVGQD+T K++MDKFI +QGDY+AII S NPLIPPIFA
Sbjct: 537 VFVVINACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFA 596
Query: 768 SDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
+DEN CC EWN AMEK+TGW R EVIGK+L RE+FG+ R+KG D LTKFMI+L
Sbjct: 597 ADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSCRRLKGPDALTKFMIVL 650
>gi|186478305|ref|NP_001117256.1| phytochrome A [Arabidopsis thaliana]
gi|332190342|gb|AEE28463.1| phytochrome A [Arabidopsis thaliana]
Length = 1014
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/838 (52%), Positives = 587/838 (70%), Gaps = 20/838 (2%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D R+LFT PS ++L KA ++SLLNPILVH R+ KPFYAI+HR+ I+ID
Sbjct: 17 IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHC--RTSAKPFYAIIHRVTGSIIIDF 74
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y
Sbjct: 75 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAY 134
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+DDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V+Q
Sbjct: 135 KFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVLQ 194
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------- 360
++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 195 DEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQKR 254
Query: 361 MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCD 420
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLCD
Sbjct: 255 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLCD 314
Query: 421 MLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDC 480
ML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL H D
Sbjct: 315 MLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMDS 374
Query: 481 TGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHK 540
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+ +
Sbjct: 375 TGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDR 434
Query: 541 DNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNT 600
D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 435 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIYS 494
Query: 601 QQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMG 660
+ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGL EA+G
Sbjct: 495 KLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIG 554
Query: 661 KSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDY 720
K + +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 555 KHFL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 613
Query: 721 KNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAA 780
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+EWN A
Sbjct: 614 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 673
Query: 781 MEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGF 837
M K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q E F F
Sbjct: 674 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFAF 733
Query: 838 FNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELA 897
F R G++VE L S++ D EG V G FCF+Q+ +LQ AL Q L + ++K LA
Sbjct: 734 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALA 793
Query: 898 YIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
YI+++++NPL+GI F K++E + + QR+ L+TS C++Q+ I+D DL I EG
Sbjct: 794 YIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEG 851
>gi|218683857|gb|ACL00883.1| phytochrome B [Camelina microcarpa]
Length = 634
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/634 (67%), Positives = 511/634 (80%), Gaps = 14/634 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEV++E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV+V+Q L Q
Sbjct: 61 GEVLAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-----------SMKLWGLVVCH 370
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN D SM+LWGLVVCH
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNDEDGSNVASGRSSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKCDGA+ Y G+ + +GV P+E Q++D+ WLL NH D TGLSTDS +
Sbjct: 241 VTQSPSIMDLVKCDGASFLYHGKYYALGVAPSEVQIRDVVEWLLANHADSTGLSTDSFGD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MH RS
Sbjct: 301 AGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHSRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM--- 607
SFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E +SK Q M
Sbjct: 361 SFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFRESEAAMNSKTVDGAVQPYKYMAGE 420
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ ++
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDL 480
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
+++E++ V L+ RAL G+EDKNVE+KL+ F + Q V+++V+AC+S+DY NN+ GV
Sbjct: 481 IYKENEETVSKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFVVVSACSSKDYLNNIVGV 540
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CFV QD+T K++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN CC EWN AMEK+TG
Sbjct: 541 CFVAQDVTGRKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGL 600
Query: 788 MRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGKML E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 SRSEVIGKMLVGEVFGSSCRLKGPDALTKFMIVL 634
>gi|1813953|emb|CAA71838.1| photoreceptor [Ceratodon purpureus]
Length = 1299
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/762 (59%), Positives = 565/762 (74%), Gaps = 16/762 (2%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGL 92
+K + ADA L A +E S SG SF+YS+SV E VP +TAYL ++QRGGL
Sbjct: 8 SKHSVRVAQTTADAALEAVYEMSGDSGDSFDYSKSVGQSAESVPAGAVTAYLQRMQRGGL 67
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDL--RSRSEDFELNGL-IGIDARTLFTPPSGA 149
IQ FGCM+AVEEP F +I YSEN E LDL ++ E++ L IG D RTLFTP S A
Sbjct: 68 IQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSMGEMDVLGIGTDIRTLFTPSSSA 127
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGD-PALSLAG 208
+L KAAA+++ISLLNPI VH R KP YAI HRID+GIVID E K D P + AG
Sbjct: 128 ALEKAAATQDISLLNPITVHC--RRSGKPLYAIAHRIDIGIVIDFEAVKMIDVPVSAAAG 185
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AI+RLQALPGGDI LLCDT+VE+V++LTGYDRVM + FH+D+HGEVV+EI
Sbjct: 186 ALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGYDRVMAFKFHEDEHGEVVAEI 245
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RR DLEPY+G+H+PA DIPQA+RFL +NRVR+I DC+A PV +IQ +++QP+ L ST
Sbjct: 246 RRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYASPVKLIQDLDIRQPVSLAGST 305
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSM---------KLWGLVVCHHTSPRYIPF 379
LR+PHGCH QYM NMGSIASLVMAVIIN + KLWGLVVC HTSPR +PF
Sbjct: 306 LRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAIQRGRKLWGLVVCQHTSPRTVPF 365
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLR CEFL+Q F +QL + +++ QL EK+ILRTQ LLCDMLLRDAP IV+Q+P+IMD
Sbjct: 366 PLRSVCEFLMQVFGMQLNLHVELGAQLREKHILRTQTLLCDMLLRDAPIGIVSQTPNIMD 425
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYYG R WL+G TPTE+Q+K+IA WLL +H D TGLSTDSLA+A YPGA LL
Sbjct: 426 LVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHNDSTGLSTDSLADANYPGAHLL 485
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA A+IT+KDFLFWFRSHTA EVKWGGAKH P+ KD+G KMHPRSSFKAFLEVV
Sbjct: 486 GDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPDEKDDGRKMHPRSSFKAFLEVV 545
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
RS PWE E++AIHSLQ+++R SF+++ ++D+K + + N K+QGV+E +++A E
Sbjct: 546 NKRSPPWEDVEMDAIHSLQLILRGSFRDI-ADSDTKTMIHARLNDLKLQGVEERNALANE 604
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
M R++ETA API VDS G IN WNAK+A++TGLP EAM SL ++V +ES VE L
Sbjct: 605 MSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEEAMHCSLTKDLVLDESVVVVERL 664
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKV 739
+ AL GEE++NVE+KL+ F Q V ++VNAC SRD + V GV FVGQD+T +++
Sbjct: 665 LSLALQGEEEQNVEIKLKTFGTQTTERAVILIVNACCSRDASDTVVGVFFVGQDVTEQRM 724
Query: 740 LMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAM 781
MD+F R+QG + +Q +PL+ P F DE + N+A+
Sbjct: 725 FMDRFTRIQGGEKTTVQDPHPLMRPSFDGDEFGRTFKRNSAL 766
>gi|309256335|gb|ADO60995.1| phytochrome b [Helianthus annuus]
Length = 683
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/691 (65%), Positives = 542/691 (78%), Gaps = 18/691 (2%)
Query: 19 TTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEE 78
+TP S+ A++ ++K I Y DA L A +EQS SGKSF+YS+S+ + + + E+
Sbjct: 1 STP--STSARVDSMSKA---IAQYALDARLHAVYEQSGESGKSFDYSQSIKTTTDSIAEQ 55
Query: 79 QITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLI 135
Q+TAYLSKIQRGG IQPFGCM+A++ TFR+I +SEN E L L +S D I
Sbjct: 56 QMTAYLSKIQRGGHIQPFGCMIAIDNTTFRVIAFSENARERLGLAPQSVPSLDKPEILTI 115
Query: 136 GIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLE 195
G D +TLFTP S L +A +REI+LLNP+ VHS + KPFYAILHRIDVGIVIDLE
Sbjct: 116 GTDVKTLFTPSSALLLERAFRAREITLLNPVWVHSKNSG--KPFYAILHRIDVGIVIDLE 173
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P+++ DPALS+AGAVQSQKLAV AIS LQALPGGDI LLCDTVV++V++LTGYDRVM+Y
Sbjct: 174 PARTEDPALSIAGAVQSQKLAVRAISNLQALPGGDIKLLCDTVVQNVRELTGYDRVMVYK 233
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+E +R DL+PY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV V+Q
Sbjct: 234 FHEDEHGEVVAESKRPDLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHANPVRVVQD 293
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------SMKLWGLVV 368
L QPLCLV STLR+PHGCH QYM NMGSIASL +AVIIN + +M LWGLVV
Sbjct: 294 DNLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNEDGASGRGTMGLWGLVV 353
Query: 369 CHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPF 428
CHHTS R IPFPLRYACEFL+QAF LQL +ELQ+A Q+ EK ILRTQ LLCDM+LRD+P
Sbjct: 354 CHHTSARCIPFPLRYACEFLMQAFGLQLNLELQLASQMLEKRILRTQTLLCDMILRDSPT 413
Query: 429 SIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSL 488
IVTQSPSIMDLVKCDGAALYY + + +G+TPTESQ+KDI WL H D TGLSTDSL
Sbjct: 414 GIVTQSPSIMDLVKCDGAALYYQEKYYPLGITPTESQIKDIVEWLSACHTDSTGLSTDSL 473
Query: 489 AEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHP 548
A+AGY GAA LG AVCGMA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHP
Sbjct: 474 ADAGYXGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 533
Query: 549 RSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQ 608
RSSF AFLEVVK+RS WE +E++AIHSLQ+++RDSF++ +EN SK Q ++
Sbjct: 534 RSSFNAFLEVVKSRSSXWENAEMDAIHSLQLILRDSFKD-PDENXSKAVVKVQMXEMGLE 592
Query: 609 GVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVV 668
GVDELSSVA EMVRLIETATAPIF VD G INGWNAK+AELTGL +EAMGKSL+ +++
Sbjct: 593 GVDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVRDLI 652
Query: 669 HEESQGAVENLICRALLGEEDKNVELKLRKF 699
++ES+ V L+ AL GEEDKNVE+KL F
Sbjct: 653 YKESEETVTKLLDHALQGEEDKNVEIKLXTF 683
>gi|166563|gb|AAA76820.1| phytochrome [Avena sativa]
Length = 1129
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/944 (48%), Positives = 622/944 (65%), Gaps = 34/944 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVP-----EEQITAYLSKIQRGGL 92
++ DA L AE+E+S G SF+YS+ V + +G P E++ AYL IQ+G L
Sbjct: 22 VLAQTTLDAELNAEYEES---GDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKL 78
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGA 149
IQ FGC+LA++E +F +I +SEN EML S S D IG + R+LF+
Sbjct: 79 IQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AGA
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAGA 196
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
+QS KLA AIS++Q+LPGG + +LC+TVV++V LTGYDRVM Y FH+DDHGEV SEI
Sbjct: 197 LQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEIT 256
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A + VI+++ L + L S L
Sbjct: 257 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSAL 316
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVII---------------NSKDSMKLWGLVVCHHTSP 374
R+PH CHLQYM NM SIASLVMAV++ + KLWGL+VCHH SP
Sbjct: 317 RAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESP 376
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVTQ 433
RY+PFPLRYACEFL Q F++ + E ++ QL EKNIL+ Q +L DML R+A P +IV+
Sbjct: 377 RYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSG 436
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
+P+IMDLVKCDGAAL YGG+ W + PTESQ+ DIA+WL + H D TGLSTDSL +AGY
Sbjct: 437 TPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGY 496
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGAA LG +CGMA A+I SKD LFWFRSHTA E++WGGAK+ P D+ +MHPR SFK
Sbjct: 497 PGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFK 556
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVVK +S PW E++AIHSLQ+++R + + + N Q K+ G+ EL
Sbjct: 557 AFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDN-QIGDLKLDGLAEL 615
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V + S
Sbjct: 616 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEDSSV 674
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV QD
Sbjct: 675 PVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 734
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
+T K++MDKF R++GDY+AII + NPLIPPIF +DE CSEWNAAM K+TGW R EV+
Sbjct: 735 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVL 794
Query: 794 GKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML E+F + C +K +D +L+ + G+ TE PFGFF+R G+++E L+
Sbjct: 795 DKMLLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLS 854
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
A+R+ + G + G FCF+ + +LQ AL+ Q + ++K +Y+R + NPL+G+
Sbjct: 855 ANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGM 914
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
+ K L+++ ++E Q + + D C QI I+ +D I E
Sbjct: 915 LYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITE 958
>gi|2851597|sp|P25848.3|PHY1_CERPU RecName: Full=Light-sensor Protein kinase; Includes: RecName:
Full=Phytochrome; Includes: RecName: Full=Protein kinase
gi|1839248|gb|AAB47762.1| phytochrome [Ceratodon purpureus]
Length = 1307
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/772 (58%), Positives = 568/772 (73%), Gaps = 16/772 (2%)
Query: 23 KSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITA 82
K+ + +K + ADA L A +E S SG SF+YS+SV E VP +TA
Sbjct: 6 KTYSSTTSAKSKHSVRVAQTTADAALEAVYEMSGDSGDSFDYSKSVGQSAESVPAGAVTA 65
Query: 83 YLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDL--RSRSEDFELNGL-IGIDA 139
YL ++QR GLIQ FGCM+AVEEP F +I YSEN E LDL ++ E++ L IG D
Sbjct: 66 YLQRMQREGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSMGEMDVLGIGTDI 125
Query: 140 RTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKS 199
RTLFTP S A+L KAAA+++ISLLNPI VH R KP YAI HRID+GIVID E K
Sbjct: 126 RTLFTPSSSAALEKAAATQDISLLNPITVHC--RRSGKPLYAIAHRIDIGIVIDFEAVKM 183
Query: 200 GD-PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHD 258
D P + AGA+QS KLA AI+RLQALPGGDI LLCDT+VE+V++LTGYDRVM + FH+
Sbjct: 184 IDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGYDRVMAFKFHE 243
Query: 259 DDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKEL 318
D+HGEVV+EIRR DLEPY+G+H+PA DIPQA+RFL +NRVR+I DC+A PV +IQ ++
Sbjct: 244 DEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYASPVKLIQDPDI 303
Query: 319 KQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSM---------KLWGLVVC 369
+QP+ L STLR+PHGCH QYM NMGSIASLVMAVIIN + KLWGLVVC
Sbjct: 304 RQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAIQRGRKLWGLVVC 363
Query: 370 HHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFS 429
HTSPR +PFPLR CEFL+Q F +QL + +++A QL EK+ILRTQ LLCDMLLRDAP
Sbjct: 364 QHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELAAQLREKHILRTQTLLCDMLLRDAPIG 423
Query: 430 IVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLA 489
IV+Q+P+IMDLVKCDGAALYYG R WL+G TPTE+Q+K+IA WLL +H D TGLSTDSLA
Sbjct: 424 IVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHNDSTGLSTDSLA 483
Query: 490 EAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPR 549
+A YPGA LLG AVCGMA A+IT+KDFLFWFRSHTA EVKWGGAKH P+ KD+G KMHPR
Sbjct: 484 DANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPDEKDDGRKMHPR 543
Query: 550 SSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQG 609
SSFKAFLEVV RS PWE E++AIHSLQ+++R SF+++ ++D+K + + N K+QG
Sbjct: 544 SSFKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDI-ADSDTKTMIHARLNDLKLQG 602
Query: 610 VDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVH 669
V+E +++A EM R++ETA API VDS G IN WNAK+A++TGLP EAM SL ++V
Sbjct: 603 VEERNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEEAMHCSLTKDLVL 662
Query: 670 EESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCF 729
+ES VE L+ AL GEE++NVE+KL+ F Q V ++VNAC SRD + V GV F
Sbjct: 663 DESVVVVERLLSLALQGEEEQNVEIKLKTFGTQTTERAVILIVNACCSRDASDFVVGVFF 722
Query: 730 VGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAM 781
VGQD+T +++ MD+F R+QG + +Q +PL+ P F DE + N+A+
Sbjct: 723 VGQDVTEQRMFMDRFTRIQGGEKTTVQDPHPLMRPSFDGDEFGRTFKRNSAL 774
>gi|130181|sp|P06593.3|PHYA3_AVESA RecName: Full=Phytochrome A type 3; Short=AP3
gi|16111|emb|CAA26999.1| unnamed protein product [Avena sativa]
Length = 1129
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/944 (48%), Positives = 621/944 (65%), Gaps = 34/944 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVP-----EEQITAYLSKIQRGGL 92
++ DA L AE+E+S G SF+YS+ V + +G P E++ AYL IQ+G L
Sbjct: 22 VLAQTTLDAELNAEYEES---GDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKL 78
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGA 149
IQ FGC+LA++E +F +I +SEN EML S S D IG + R+LF+
Sbjct: 79 IQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AGA
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAGA 196
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
+QS KLA AIS++Q+LPGG + +LC+TVV++V LTGYDRVM Y FH+DDHGEV SEI
Sbjct: 197 LQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEIT 256
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+ LEPYLG+H+PA DIPQAAR LF +N+VRMICDC A + VI+++ L + L S L
Sbjct: 257 KPGLEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSAL 316
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVII---------------NSKDSMKLWGLVVCHHTSP 374
R+PH CHLQYM NM SIASLVMAV++ + KLWGL+VCHH SP
Sbjct: 317 RAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESP 376
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVTQ 433
RY+PFPLRYACEFL Q F++ + E ++ QL EKNIL+ Q +L DML R+A P +IV+
Sbjct: 377 RYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSG 436
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
+P+IMDLVKCDGAAL YGG+ W + PTESQ+ DIA+WL + H D TGLSTDSL +AGY
Sbjct: 437 TPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGY 496
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGAA LG +CGMA A+I SKD LFWFRSHTA E++WGGAK+ P D+ +MHPR SFK
Sbjct: 497 PGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFK 556
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVVK +S PW E++AIHSLQ+++R + + + N Q K+ G+ EL
Sbjct: 557 AFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDN-QIGDLKLDGLAEL 615
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V + S
Sbjct: 616 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEDSSV 674
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV QD
Sbjct: 675 PVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 734
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
+T K++MDKF R++GDY+AII + NPLIPPIF +DE CSEWNAAM K+TGW R EV+
Sbjct: 735 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVL 794
Query: 794 GKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML E+F + C +K +D +L+ + G+ TE PFGFF+R G+++E L+
Sbjct: 795 DKMLLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLS 854
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
A+R+ + G + G FCF+ + +LQ AL+ Q + ++K +Y+R + NPL+G+
Sbjct: 855 ANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGM 914
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
+ K L+++ ++E Q + + D C QI I+ +D I E
Sbjct: 915 LYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITE 958
>gi|406685543|gb|AFS51212.1| phytochrome P, partial [Podocarpus acutifolius]
Length = 619
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/621 (71%), Positives = 505/621 (81%), Gaps = 21/621 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG------- 133
AYLS++QRGG IQPFGC+LAVEE F+II YS+N LEMLDL +S EL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 134 LIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVID 193
IG D RTLFT S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+VID
Sbjct: 61 TIGTDVRTLFTASSARALEKAATAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVID 118
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
LEP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+
Sbjct: 119 LEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMV 178
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VI
Sbjct: 179 YKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVI 238
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKL 363
QS+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 239 QSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKL 298
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLL
Sbjct: 299 WGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK R PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 479 RRMHPRSSFKAFLEVVKRRGLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLT 537
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL
Sbjct: 538 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 597
Query: 664 IDEVVHEESQGAVENLICRAL 684
+ +VV EES +E ++ RAL
Sbjct: 598 VHDVVLEESAECLEKMLYRAL 618
>gi|130182|sp|P06594.3|PHYA4_AVESA RecName: Full=Phytochrome A type 4; Short=AP4
gi|16113|emb|CAA27000.1| unnamed protein product [Avena sativa]
Length = 1129
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/944 (48%), Positives = 621/944 (65%), Gaps = 34/944 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVP-----EEQITAYLSKIQRGGL 92
++ DA L AE+E+S G SF+YS+ V + +G P E++ AYL IQ+G L
Sbjct: 22 VLAQTTLDAELNAEYEES---GDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKL 78
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGA 149
IQ FGCMLA++E +F +I +SEN EML S S D IG + R+LF+
Sbjct: 79 IQTFGCMLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AGA
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAGA 196
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
+QS KLA AIS++Q+LPGG + +LC+TVV++V LTGYDRVM Y FH+DDHGEV +EI
Sbjct: 197 LQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEIT 256
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A + VI+++ L + L S L
Sbjct: 257 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSAL 316
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVII---------------NSKDSMKLWGLVVCHHTSP 374
R+PH CHLQYM NM SIASLVMAV++ + KLWGL+VCHH SP
Sbjct: 317 RAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQQKKKLWGLLVCHHESP 376
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVTQ 433
RY+PFPLRYACEFL Q F++ + E ++ QL EK+IL+ Q +L DML R+A P +IV+
Sbjct: 377 RYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKSILKMQTMLSDMLFREASPLTIVSG 436
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
+P+IMDLVKCDGAAL YGG+ W + PTESQ+ DIA+WL + H D TGLSTDSL +AGY
Sbjct: 437 APNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGY 496
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA+ LG +CGMA A+I SKD +FWFRSHTA E++WGGAKH D+ +MHPR SFK
Sbjct: 497 PGASALGDMICGMAVAKINSKDIIFWFRSHTAAEIRWGGAKHDSSDMDDSRRMHPRLSFK 556
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVVK +S PW E++AIHSLQ+++R + + + N Q K+ G+ EL
Sbjct: 557 AFLEVVKMKSLPWTDYEMDAIHSLQLILRGTLNDASKPKREASLDN-QIGDLKLDGLAEL 615
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S
Sbjct: 616 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESSV 674
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV QD
Sbjct: 675 PVVQRMLYLALQGKEEKEVRFEVKTHGPRRDDGPVILVVNACASRDLHDHVVGVCFVAQD 734
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
+T K++MDKF R++GDY+AII + NPLIPPIF +DE CSEWNAAM K+TGW R EV+
Sbjct: 735 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVL 794
Query: 794 GKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML E+F + C +K ++ +L+ + G+ TE PFGFF+R G+++E L+
Sbjct: 795 DKMLLGEVFDSSNASCPLKNKNAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLS 854
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
A+R+ + G + G FCF+ + +LQ AL+ Q + ++K +Y+R + NPL+G+
Sbjct: 855 ANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGM 914
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
+ K L+++ ++E Q + + D C QI I+ +D I E
Sbjct: 915 LYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSISE 958
>gi|339778357|gb|AEK06060.1| phytochrome B2 [Populus balsamifera]
gi|339778359|gb|AEK06061.1| phytochrome B2 [Populus balsamifera]
gi|339778361|gb|AEK06062.1| phytochrome B2 [Populus balsamifera]
gi|339778363|gb|AEK06063.1| phytochrome B2 [Populus balsamifera]
gi|339778365|gb|AEK06064.1| phytochrome B2 [Populus balsamifera]
gi|339778367|gb|AEK06065.1| phytochrome B2 [Populus balsamifera]
gi|339778369|gb|AEK06066.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/633 (69%), Positives = 511/633 (80%), Gaps = 16/633 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS +G+SF+YS+SV + + VPE+QITAYLSKIQRGG IQPFGC
Sbjct: 8 IAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVPEQQITAYLSKIQRGGHIQPFGC 67
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
M+A +E +FR+I YSEN +ML L +S E E+ +G D R LF P S L KA
Sbjct: 68 MIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKA 126
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQK
Sbjct: 127 FGAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQK 184
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AIS+LQ+LPGGDI LLCDTVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLE
Sbjct: 185 LAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLE 244
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY+G+H+P+ DIPQA+RFLFKQNRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHG
Sbjct: 245 PYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAPHG 304
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYACE 386
CH QYM NMGSIASL MAVII D SM+LWGLVVCHHTS R IPFPLRYACE
Sbjct: 305 CHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACE 364
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGA
Sbjct: 365 FLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGA 424
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA LG AVCGM
Sbjct: 425 ALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGM 484
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A I +DFLFWFRSHTAKEVKWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PW
Sbjct: 485 AVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 544
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
E +E++AIHSLQ+++RDSF++ E N SK +TQ ++QG+DELSSVA EMVRLIET
Sbjct: 545 ENAEMDAIHSLQLILRDSFRDAEATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIET 603
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
ATAPIF VD G INGWNAKVAELTGL EAM
Sbjct: 604 ATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 99/139 (71%)
Query: 817 FMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQ 876
FMI L+ I G T+ PF FF+R + V+ LTA++R + EG +IG FCF+QI P+LQ
Sbjct: 794 FMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQ 853
Query: 877 PALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDAC 936
L+ Q ++ +A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS AC
Sbjct: 854 QTLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAAC 913
Query: 937 ERQIMTIIDGMDLRCIEEG 955
E+QI+ II +DL IE G
Sbjct: 914 EKQILKIIRDIDLESIENG 932
>gi|339778383|gb|AEK06073.1| phytochrome B2 [Populus balsamifera]
gi|339778385|gb|AEK06074.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/633 (69%), Positives = 510/633 (80%), Gaps = 16/633 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS +G+SF+YS+SV + + VPE+QITAYLSKIQRGG IQPFGC
Sbjct: 8 IAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVPEQQITAYLSKIQRGGHIQPFGC 67
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
M+A +E +FR+I YSEN +ML L +S E E+ +G D R LF P S L KA
Sbjct: 68 MIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKA 126
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQK
Sbjct: 127 FGAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQK 184
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AIS+LQ+LPGGDI LLCDTVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLE
Sbjct: 185 LAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLE 244
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY+G+H+P+ DIPQA+RFLFKQNRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHG
Sbjct: 245 PYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAPHG 304
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYACE 386
CH QYM NMGSIASL MAVII D SM+LWGLVVCHHTS R IPFPLRYACE
Sbjct: 305 CHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACE 364
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGA
Sbjct: 365 FLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGA 424
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYY G+ + +GVTPTE Q+KDI WLL HGD TGLSTDSLA+AGYPGAA LG AVCGM
Sbjct: 425 ALYYQGQYYPLGVTPTEXQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGM 484
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A I +DFLFWFRSHTAKEVKWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PW
Sbjct: 485 AVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 544
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
E +E++AIHSLQ+++RDSF++ E N SK +TQ ++QG+DELSSVA EMVRLIET
Sbjct: 545 ENAEMDAIHSLQLILRDSFRDAEATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIET 603
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
ATAPIF VD G INGWNAKVAELTGL EAM
Sbjct: 604 ATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 99/139 (71%)
Query: 817 FMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQ 876
FMI L+ I G T+ PF FF+R + V+ LTA++R + EG +IG FCF+QI P+LQ
Sbjct: 794 FMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQ 853
Query: 877 PALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDAC 936
L+ Q ++ +A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS AC
Sbjct: 854 QTLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAAC 913
Query: 937 ERQIMTIIDGMDLRCIEEG 955
E+QI+ II +DL IE G
Sbjct: 914 EKQILKIIRDIDLESIENG 932
>gi|339778351|gb|AEK06057.1| phytochrome B2 [Populus balsamifera]
gi|339778353|gb|AEK06058.1| phytochrome B2 [Populus balsamifera]
gi|339778355|gb|AEK06059.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/633 (69%), Positives = 511/633 (80%), Gaps = 16/633 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS +G+SF+YS+SV + + VPE+QITAYLSKIQRGG IQPFGC
Sbjct: 8 IAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVPEQQITAYLSKIQRGGHIQPFGC 67
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
M+A +E +FR+I YSEN +ML L +S E E+ +G D R LF P S L KA
Sbjct: 68 MIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKA 126
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQK
Sbjct: 127 FGAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQK 184
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AIS+LQ+LPGGDI LLCDTVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLE
Sbjct: 185 LAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLE 244
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY+G+H+P+ DIPQA+RFLFKQNRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHG
Sbjct: 245 PYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAPHG 304
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYACE 386
CH QYM NMGSIASL MAVII D SM+LWGLVVCHHTS R IPFPLRYACE
Sbjct: 305 CHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACE 364
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLR++P IVTQSPSIMDLVKCDGA
Sbjct: 365 FLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRESPTGIVTQSPSIMDLVKCDGA 424
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA LG AVCGM
Sbjct: 425 ALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGM 484
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A I +DFLFWFRSHTAKEVKWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PW
Sbjct: 485 AVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 544
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
E +E++AIHSLQ+++RDSF++ E N SK +TQ ++QG+DELSSVA EMVRLIET
Sbjct: 545 ENAEMDAIHSLQLILRDSFRDAEATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIET 603
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
ATAPIF VD G INGWNAKVAELTGL EAM
Sbjct: 604 ATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 99/139 (71%)
Query: 817 FMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQ 876
FMI L+ I G T+ PF FF+R + V+ LTA++R + EG +IG FCF+QI P+LQ
Sbjct: 794 FMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQ 853
Query: 877 PALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDAC 936
L+ Q ++ +A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS AC
Sbjct: 854 QTLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAAC 913
Query: 937 ERQIMTIIDGMDLRCIEEG 955
E+QI+ II +DL IE G
Sbjct: 914 EKQILKIIRDIDLESIENG 932
>gi|363547786|gb|AEW26934.1| phytochrome P [Macrozamia fraseri]
Length = 590
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/598 (73%), Positives = 505/598 (84%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++L+GYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELSGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EMVRLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESTETVERLLCHALRG 590
>gi|363547778|gb|AEW26930.1| phytochrome P [Macrozamia douglasii]
gi|363547793|gb|AEW26937.1| phytochrome P [Macrozamia lucida]
gi|363547800|gb|AEW26940.1| phytochrome P [Macrozamia moorei]
Length = 590
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/598 (73%), Positives = 504/598 (84%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EM RLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|339778371|gb|AEK06067.1| phytochrome B2 [Populus balsamifera]
gi|339778373|gb|AEK06068.1| phytochrome B2 [Populus balsamifera]
gi|339778375|gb|AEK06069.1| phytochrome B2 [Populus balsamifera]
gi|339778379|gb|AEK06071.1| phytochrome B2 [Populus balsamifera]
gi|339778381|gb|AEK06072.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/633 (69%), Positives = 510/633 (80%), Gaps = 16/633 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS +G+SF+YS+SV + + VPE+QITAYLSKIQRGG IQPFGC
Sbjct: 8 IAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVPEQQITAYLSKIQRGGHIQPFGC 67
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
M+A +E +FR+I YSEN +ML L +S E E+ +G D R LF P S L KA
Sbjct: 68 MIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKA 126
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQK
Sbjct: 127 FGAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQK 184
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AIS+LQ+LPGGDI LLCDTVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLE
Sbjct: 185 LAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLE 244
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY+G+H+P+ DIPQA+RFLFKQNRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHG
Sbjct: 245 PYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAPHG 304
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYACE 386
CH QYM NMGSIASL MAVII D SM+LWGLVVCHHTS R IPFPLRYACE
Sbjct: 305 CHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACE 364
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLR +P IVTQSPSIMDLVKCDGA
Sbjct: 365 FLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRXSPTGIVTQSPSIMDLVKCDGA 424
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA LG AVCGM
Sbjct: 425 ALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGM 484
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A I +DFLFWFRSHTAKEVKWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PW
Sbjct: 485 AVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 544
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
E +E++AIHSLQ+++RDSF++ E N SK +TQ ++QG+DELSSVA EMVRLIET
Sbjct: 545 ENAEMDAIHSLQLILRDSFRDAEATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIET 603
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
ATAPIF VD G INGWNAKVAELTGL EAM
Sbjct: 604 ATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 99/139 (71%)
Query: 817 FMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQ 876
FMI L+ I G T+ PF FF+R + V+ LTA++R + EG +IG FCF+QI P+LQ
Sbjct: 794 FMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQ 853
Query: 877 PALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDAC 936
L+ Q ++ +A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS AC
Sbjct: 854 QTLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAAC 913
Query: 937 ERQIMTIIDGMDLRCIEEG 955
E+QI+ II +DL IE G
Sbjct: 914 EKQILKIIRDIDLESIENG 932
>gi|339778377|gb|AEK06070.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/633 (69%), Positives = 510/633 (80%), Gaps = 16/633 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y DA L A FEQS +G+SF+YS+SV + + VPZ+QITAYLSKIQRGG IQPFGC
Sbjct: 8 IAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVPZQQITAYLSKIQRGGHIQPFGC 67
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
M+A +E +FR+I YSEN +ML L +S E E+ +G D R LF P S L KA
Sbjct: 68 MIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEIL-FVGADVRILFRPSSAVLLEKA 126
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+REI+LLNPI +HS + KPFYAILHRIDVGIVIDLEP+++ DPALS+AGAVQSQK
Sbjct: 127 FGAREITLLNPIWIHSKNSG--KPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQK 184
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AIS+LQ+LPGGDI LLCDTVV+ V++LTGYDRVM+Y FH+D+HGEVV+E +R DLE
Sbjct: 185 LAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLE 244
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY+G+H+P+ DIPQA+RFLFKQNRVRMI DCHAIPV VIQ + L QPLCLV STLR+PHG
Sbjct: 245 PYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAPHG 304
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYACE 386
CH QYM NMGSIASL MAVII D SM+LWGLVVCHHTS R IPFPLRYACE
Sbjct: 305 CHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACE 364
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+QAF LQL MELQ+A QL EK++LRTQ LLCDMLLR +P IVTQSPSIMDLVKCDGA
Sbjct: 365 FLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRXSPTGIVTQSPSIMDLVKCDGA 424
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAA LG AVCGM
Sbjct: 425 ALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGM 484
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A I +DFLFWFRSHTAKEVKWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PW
Sbjct: 485 AVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 544
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
E +E++AIHSLQ+++RDSF++ E N SK +TQ ++QG+DELSSVA EMVRLIET
Sbjct: 545 ENAEMDAIHSLQLILRDSFRDAEATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIET 603
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
ATAPIF VD G INGWNAKVAELTGL EAM
Sbjct: 604 ATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 99/139 (71%)
Query: 817 FMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQ 876
FMI L+ I G T+ PF FF+R + V+ LTA++R + EG +IG FCF+QI P+LQ
Sbjct: 794 FMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQ 853
Query: 877 PALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDAC 936
L+ Q ++ +A++KELAYI QE+KNPL+GI F + LLE++ ++E+Q+Q+LETS AC
Sbjct: 854 QTLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAAC 913
Query: 937 ERQIMTIIDGMDLRCIEEG 955
E+QI+ II +DL IE G
Sbjct: 914 EKQILKIIRDIDLESIENG 932
>gi|363547808|gb|AEW26944.1| phytochrome P [Macrozamia plurinervia]
Length = 590
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/598 (73%), Positives = 505/598 (84%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL++PLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EMVRLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547784|gb|AEW26933.1| phytochrome P [Macrozamia flexuosa]
Length = 590
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/598 (73%), Positives = 505/598 (84%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVV+DV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVKDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL++PLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+V+R SFQ++ +++++K +++ N K+Q +DELSSVA EMVRLIETAT
Sbjct: 474 VEMDAIHSLQLVLRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547776|gb|AEW26929.1| phytochrome P [Macrozamia diplomera]
gi|363547788|gb|AEW26935.1| phytochrome P [Macrozamia glaucophylla]
gi|363547804|gb|AEW26942.1| phytochrome P [Macrozamia pauli-guilielmi]
gi|363547806|gb|AEW26943.1| phytochrome P [Macrozamia platyrhachis]
Length = 590
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/598 (73%), Positives = 503/598 (84%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EIS +NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISFMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EM RLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547820|gb|AEW26950.1| phytochrome P [Macrozamia stenomera]
Length = 590
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/598 (73%), Positives = 505/598 (84%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL++PLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGY GAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYSGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EMVRLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES AVE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMEAVERLLCHALRG 590
>gi|218683937|gb|ACL00922.1| phytochrome D [Malcolmia africana]
Length = 632
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/632 (66%), Positives = 508/632 (80%), Gaps = 12/632 (1%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEV++E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC A PV V+Q L Q
Sbjct: 61 GEVIAESKREDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCSASPVRVVQDDRLAQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS--------KDSMKLWGLVVCHHTS 373
+CLV STLR+PHGCH QYM NMG+ ASL MAVIIN+ ++SM+LWGLVVCHHTS
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGTTASLAMAVIINANEEDGTGGRNSMRLWGLVVCHHTS 180
Query: 374 P-RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVT
Sbjct: 181 ASRCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVT 240
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
QSPSIMDLVKC+GAA Y G+ + +GV P+E+Q+ +I WLL H D TGLSTDSL++AG
Sbjct: 241 QSPSIMDLVKCNGAAFLYQGKYYSLGVAPSEAQIHEIVEWLLAKHSDSTGLSTDSLSDAG 300
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YP AA LG AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +MHPRSSF
Sbjct: 301 YPKAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSSF 360
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM---QG 609
KAFLEVVK+R PWE +E++AIHSLQ+++RDSF+E E +SK Q M QG
Sbjct: 361 KAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAAMNSKSADGAVQPCKDMAGEQG 420
Query: 610 VDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVH 669
+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EA GKSL+ +++H
Sbjct: 421 IDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEATGKSLVSDLIH 480
Query: 670 EESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCF 729
+E++ V L+ RAL G+E+KNVE+KL+ F + + V+++VNAC+S+DY NN+ GVCF
Sbjct: 481 KENEETVSQLLSRALRGDEEKNVEVKLKTFGSELEGKAVFVVVNACSSKDYLNNIVGVCF 540
Query: 730 VGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMR 789
VGQDIT +K +MDKFI +QGDY+AI+ S NPLIPPIFA+DEN CC EWN AMEK+TGW R
Sbjct: 541 VGQDITSQKTVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWSR 600
Query: 790 HEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
EVIGKML E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 SEVIGKMLVGEVFGSCCRLKGADALTKFMIVL 632
>gi|363547798|gb|AEW26939.1| phytochrome P [Macrozamia montana]
Length = 590
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/598 (73%), Positives = 503/598 (84%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAV E TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVGERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EM RLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547816|gb|AEW26948.1| phytochrome P [Macrozamia serpentina]
Length = 590
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/598 (73%), Positives = 503/598 (84%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHT PR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTCPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIAGWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EM RLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|218683925|gb|ACL00916.1| phytochrome D [Farsetia aegyptia]
Length = 632
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/632 (66%), Positives = 511/632 (80%), Gaps = 12/632 (1%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R+DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV VIQ L QP
Sbjct: 61 GEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVIQDDRLTQP 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHT 372
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN ++SM+LWGLVVCHHT
Sbjct: 121 MCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGITVGRNSMRLWGLVVCHHT 180
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
S R IPFPLRYACEFL+QAF LQL MELQ+A Q++EK +LR Q LLCDMLLRD+P IVT
Sbjct: 181 SARSIPFPLRYACEFLMQAFGLQLNMELQLAQQVSEKRVLRMQTLLCDMLLRDSPAGIVT 240
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
QSP+IMDLVKC+GAA Y G+ + +GV P+E+Q+KDI WLL NH D TGLSTDSL +AG
Sbjct: 241 QSPNIMDLVKCNGAAFLYRGKYYPLGVAPSETQIKDIVEWLLANHSDSTGLSTDSLGDAG 300
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YP AA LG AVCGMA A IT KDFLFWFRSH+ KE+KWGGAKHHPE+KD+G +MHPRSSF
Sbjct: 301 YPHAAALGDAVCGMAVAYITKKDFLFWFRSHSEKEIKWGGAKHHPENKDDGQRMHPRSSF 360
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QG 609
KAFLEVVK+R PWE +E++AIHSLQ+++RDSF++ E ++ + G Q G M G
Sbjct: 361 KAFLEVVKSRCQPWEAAEMDAIHSLQLILRDSFKDSEAMDSKAAAAGAIQPQGEDMAEHG 420
Query: 610 VDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVH 669
++E+ +VA EMVRLIETAT PIF VD G INGWNAK+AELTGL EAMGKSL+ ++++
Sbjct: 421 IEEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVRDLIY 480
Query: 670 EESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCF 729
E + V+ L+ AL G+E +NVE+KL+ F ++Q V+++VNAC+S+DY NN+ GVCF
Sbjct: 481 SEYEETVDRLLSCALQGDEGRNVEIKLKTFGPEQQGKAVFVVVNACSSKDYLNNIVGVCF 540
Query: 730 VGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMR 789
VGQD+T K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AME+ TGW R
Sbjct: 541 VGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMEQRTGWPR 600
Query: 790 HEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
EVIGK+L E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 SEVIGKLLVGEVFGSCCRLKGPDALTKFMIVL 632
>gi|363547780|gb|AEW26931.1| phytochrome P [Macrozamia dyeri]
Length = 590
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/598 (73%), Positives = 502/598 (83%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EIS +NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISFMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDT VEDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVGAISRLQSLPGGDIGLLCDTAVEDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EM RLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|218683849|gb|ACL00879.1| phytochrome B [Arabidopsis lyrata]
Length = 634
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/634 (66%), Positives = 511/634 (80%), Gaps = 14/634 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV+V+Q L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNAKPVLVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCH 370
+CLV STLR+PHGCH QYM NMGS ASL MAVIIN + SM+LWGLVVCH
Sbjct: 121 MCLVGSTLRAPHGCHSQYMANMGSTASLAMAVIINGNEEDGSNAASGRSSMRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LRTQ LLCDMLLRD+P I
Sbjct: 181 HTSSRRIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD+ WLL NH D TGLSTDSL +
Sbjct: 241 VTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHADSTGLSTDSLGD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYP AA LG AVCGMA A IT +DFLFWFRSHTAKE+KWGGAKHHPE +D+G +MHPR
Sbjct: 301 AGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDEDDGQRMHPRL 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK-VQGNTQ--QNGSKM 607
SF+AFL VVK+RS PWE +E++AIHSLQ+++RDSF+E E +SK V G Q ++ +
Sbjct: 361 SFQAFLGVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAVQPCRDMAGE 420
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA +AELTGL EAMGKSL+ ++
Sbjct: 421 QGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNATIAELTGLSVEEAMGKSLVSDL 480
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
+++ ++ V L+ RAL G+E+KNVE+KL+ F + Q +++VNAC S+DY NN+ GV
Sbjct: 481 IYKGNEETVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAXFVVVNACFSKDYLNNIVGV 540
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN CC EWN AMEK+TGW
Sbjct: 541 CFVGQDVTGQKLVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNMAMEKLTGW 600
Query: 788 MRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGKML E+FG+ C +KG D LTKFMI+L
Sbjct: 601 SRSEVIGKMLVGEVFGSCCMLKGPDALTKFMIVL 634
>gi|218683909|gb|ACL00909.1| phytochrome D [Camelina microcarpa]
Length = 631
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/632 (67%), Positives = 505/632 (79%), Gaps = 13/632 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R+DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV V+Q L QP
Sbjct: 61 GEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQP 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHH 371
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN + SM+LWGLVVCHH
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGVNTSGRHSMRLWGLVVCHH 180
Query: 372 TSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIV 431
TS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+ IV
Sbjct: 181 TSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSRAGIV 240
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
Q PSIMDLVKC+GAA Y GR + +GV PTE+Q+ DI WLL NH D TGLSTDSL++A
Sbjct: 241 MQRPSIMDLVKCNGAAFLYQGRYYPLGVAPTEAQINDIVKWLLANHSDSTGLSTDSLSDA 300
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +MHPRSS
Sbjct: 301 GYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSS 360
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM--QG 609
F+AFLEVVK R PWE +E++AIHSLQ+++RDSF+E E DSK Q + M QG
Sbjct: 361 FQAFLEVVKGRCQPWETAEMDAIHSLQLILRDSFKE-SETMDSKAAAAVQPHKDDMADQG 419
Query: 610 VDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVH 669
+ E+ +VA EMVRLIETAT PIF VD G INGWN K+AELTGL EAMGKSL+ ++++
Sbjct: 420 MQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNDKIAELTGLSVEEAMGKSLVRDLIY 479
Query: 670 EESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCF 729
+E V+ L+ AL G+E KNVE+KL+ F + Q V+++VN+C+S+DY NN+ GVCF
Sbjct: 480 KEYAETVDRLLSCALKGDEGKNVEVKLKNFSPELQGKAVFVVVNSCSSKDYSNNIVGVCF 539
Query: 730 VGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMR 789
VGQD+T K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R
Sbjct: 540 VGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPR 599
Query: 790 HEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
EVIGKML +E+FG+ CR+KG D LTKFMI+L
Sbjct: 600 SEVIGKMLVKEVFGSCCRLKGPDALTKFMIVL 631
>gi|218683923|gb|ACL00915.1| phytochrome D [Farsetia aegyptia]
Length = 632
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/632 (66%), Positives = 510/632 (80%), Gaps = 12/632 (1%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R+DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV VIQ L QP
Sbjct: 61 GEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVIQDDRLTQP 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHT 372
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN ++SM+LWGLVVCHHT
Sbjct: 121 MCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGITVGRNSMRLWGLVVCHHT 180
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
S R IPFPLRYACEFL+QAF LQL MELQ+A Q++EK +LR Q LLCDMLLRD+P IVT
Sbjct: 181 SARSIPFPLRYACEFLMQAFGLQLNMELQLAQQVSEKRVLRMQTLLCDMLLRDSPAGIVT 240
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
QSP+IMDLVKC+GAA Y G+ + +GV P+E+Q+KDI WLL NH D TGLSTDSL +AG
Sbjct: 241 QSPNIMDLVKCNGAAFLYRGKYYPLGVAPSEAQIKDIVEWLLANHSDSTGLSTDSLGDAG 300
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YP AA LG AVCGMA A IT KDFLFWFRSH+ KE+KWGGAKHHPE+KD+G +MHPRSSF
Sbjct: 301 YPHAAALGDAVCGMAVAYITKKDFLFWFRSHSEKEIKWGGAKHHPENKDDGQRMHPRSSF 360
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QG 609
KAFLEVVK+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q G M G
Sbjct: 361 KAFLEVVKSRCQPWEAAEMDAIHSLQLILRDSFKESEAMDSKTAAAGAIQPQGEDMAEHG 420
Query: 610 VDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVH 669
++E+ +VA EMVRLIETAT PIF VD G INGWNAK+AELTGL EAMGKSL+ ++++
Sbjct: 421 IEEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVRDLIY 480
Query: 670 EESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCF 729
E + V+ L+ AL G+E +NVE+KL+ F ++Q V+++VNAC+S+DY NN+ GVCF
Sbjct: 481 NEYEETVDRLLSCALQGDEGRNVEIKLKTFGPEQQGKAVFVVVNACSSKDYLNNIVGVCF 540
Query: 730 VGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMR 789
VGQD+T K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AM + TGW R
Sbjct: 541 VGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMGQRTGWPR 600
Query: 790 HEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
EVIGK+L E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 SEVIGKLLVGEVFGSCCRLKGPDALTKFMIVL 632
>gi|363547812|gb|AEW26946.1| phytochrome P [Macrozamia reducta]
Length = 590
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/598 (72%), Positives = 503/598 (84%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EISL+NPI +HS RS KP YAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISLMNPIWMHS--RSSGKPSYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL E++IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTERHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSF+AFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFRAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EM RLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547822|gb|AEW26951.1| phytochrome P [Microcycas calocoma]
Length = 590
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/596 (73%), Positives = 502/596 (84%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP SG S
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPSSGLS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISLLNPI +HS S KPFY I+HRIDVG+VID+EP GD A+S+AGAV
Sbjct: 62 LEKAAAAQEISLLNPIWMHSKSSG--KPFYVIVHRIDVGMVIDIEPV--GDAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQA+PGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQAVPGGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVSVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV+IN+ +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVINA--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLASQLTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTESQ+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWVLGVTPTESQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSH AKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHAAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SF+++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFRDI-DDSETKTMIHSRLNDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLRLALRG 590
>gi|363547790|gb|AEW26936.1| phytochrome P [Macrozamia johnsonii]
Length = 590
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/598 (73%), Positives = 502/598 (83%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTL TP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLLTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVGAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHT PR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTCPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EM RLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|406685461|gb|AFS51171.1| phytochrome P, partial [Araucaria biramulata]
Length = 629
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/606 (71%), Positives = 498/606 (82%), Gaps = 24/606 (3%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D RTLFT S +L KAA + EISL+NPI VHS ++ KPFYAI+HRIDVG+V+DL
Sbjct: 27 IGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRIDVGMVMDL 84
Query: 195 EPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYD 249
EP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYD
Sbjct: 85 EPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYD 144
Query: 250 RVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIP 309
RVM+Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A P
Sbjct: 145 RVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAAP 204
Query: 310 VMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS--------- 360
V VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 205 VKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGGGGSG 264
Query: 361 -------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILR 413
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILR
Sbjct: 265 SGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILR 324
Query: 414 TQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWL 473
TQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WL
Sbjct: 325 TQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWL 384
Query: 474 LNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGA 533
L H D TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGA
Sbjct: 385 LEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGA 444
Query: 534 KHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEND 593
KHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N
Sbjct: 445 KHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN- 503
Query: 594 SKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGL 653
+K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVAELTGL
Sbjct: 504 TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGL 563
Query: 654 PASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
P EAMGKSL+ +++ EES V+ ++ AL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 564 PVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIYLVVN 623
Query: 714 ACTSRD 719
AC+SRD
Sbjct: 624 ACSSRD 629
>gi|363547796|gb|AEW26938.1| phytochrome P [Macrozamia miquelii]
Length = 590
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/598 (73%), Positives = 501/598 (83%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHT PR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTCPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFW RSHTAKE+KWGGAKHHP KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWLRSHTAKEIKWGGAKHHPNDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EM RLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547810|gb|AEW26945.1| phytochrome P [Macrozamia polymorpha]
Length = 590
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/598 (72%), Positives = 502/598 (83%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EIS +NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISFMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DI QA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDISQASRFLFMQNRVRMICDCRATPVRVIQATELRQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GV+P E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVSPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EM RLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|357117591|ref|XP_003560548.1| PREDICTED: phytochrome A type 3-like [Brachypodium distachyon]
Length = 1131
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/944 (47%), Positives = 620/944 (65%), Gaps = 34/944 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ-----ITAYLSKIQRGGL 92
I+ DA L AE+E++ G SFNYS+ V + PE+Q + AYL IQ+G +
Sbjct: 24 ILAQTTLDAELNAEYEET---GDSFNYSKLVEAQRNTPPEQQGRSEKVIAYLQHIQKGKM 80
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGA 149
IQ FGC+LA++E +F +I +S+N EML + S S D IG + R+LFT
Sbjct: 81 IQSFGCLLALDEKSFNVIAFSQNAPEMLTMVSHAVPSVDDPPRLGIGTNVRSLFTDQGAT 140
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AGA
Sbjct: 141 ALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAGA 198
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
+QS KLA AIS++Q+LPGG + +LC+TVV++V LTGYDRVM Y FH+DDHGEV +EI
Sbjct: 199 LQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEIT 258
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A + +++ + L + L S L
Sbjct: 259 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIVEDESLPFDISLCGSAL 318
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVII---------------NSKDSMKLWGLVVCHHTSP 374
R+PH CHLQYM NM SIASLVMAV++ + KLWGL+VCHH SP
Sbjct: 319 RAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEVEAEQPAQQQKKKKLWGLLVCHHESP 378
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVTQ 433
RY+PFPLRYACEFL Q F++ + E ++ QL EK+ILR Q +L DML R+A P +I++
Sbjct: 379 RYVPFPLRYACEFLAQVFAVHVNKEFELENQLREKSILRMQTILSDMLFREASPLTIISG 438
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
+P++MDLVKCDGAAL +G + W + PTESQ++DIA WL H D TGLST+SL +AGY
Sbjct: 439 TPNVMDLVKCDGAALLHGDKVWRLRDAPTESQIRDIASWLSEVHRDSTGLSTESLHDAGY 498
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA+ LG +CGMA A+I S+D LFWFRSHTA E+KWGGAKH P D+G +MHPR SFK
Sbjct: 499 PGASALGDMICGMAVAKINSRDILFWFRSHTAAEIKWGGAKHDPSDMDDGRRMHPRLSFK 558
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVVK +S W E++AIHSLQ+++R + + + N Q K+ G+ EL
Sbjct: 559 AFLEVVKMKSLSWSDYEMDAIHSLQLILRGALNDGIKATKGASLDN-QIGDLKLDGLAEL 617
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V EMVRL+ETAT PI VD +G INGWN K AELTGL +A+G+ ++ +V E S
Sbjct: 618 QAVTSEMVRLMETATVPILAVDGNGLINGWNQKAAELTGLRVDDAIGRHIL-TLVEESSV 676
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ AL G+E+K V +++ +++ V ++VNAC SRD ++V GVCFV QD
Sbjct: 677 PVVQRMLYLALQGKEEKEVRFEVKTHGPKREDGPVILVVNACASRDLHDHVVGVCFVAQD 736
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
+T K++MDKF R++GDY+AII + NPLIPPIF +DE CSEWN AM +TGW R EV+
Sbjct: 737 MTVHKLVMDKFTRIEGDYKAIIHNPNPLIPPIFGTDEFGWCSEWNTAMTMLTGWHRDEVV 796
Query: 794 GKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML E+F + C +K +D +L+ + G+ T+ PFGFF+R G+++E L+
Sbjct: 797 DKMLLGEVFDSSSASCLLKNKDAFISLCVLINSALAGEETDKAPFGFFDRNGKYIECLLS 856
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
A+R+ +A G + G FCF+Q+ +LQ AL Q + K+K +Y+R + NPL+G+
Sbjct: 857 ANRKENAGGLITGVFCFIQVASHELQHALHVQQASEQTSLRKLKAFSYMRHAINNPLSGM 916
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
+ K L+++ ++E Q + + +D C Q+ I+ +D I E
Sbjct: 917 LYSRKALKNTDLNEEQMKQIHVADNCHHQLNKILADLDQDNITE 960
>gi|218683945|gb|ACL00926.1| phytochrome D [Sisymbrium altissimum]
Length = 632
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/633 (67%), Positives = 512/633 (80%), Gaps = 14/633 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEV++E +R+DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV V+Q L Q
Sbjct: 61 GEVIAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGLVVCHHT 372
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN + SMKLWGLVVCHHT
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLGMAVIINGNENDGNGGGRNSMKLWGLVVCHHT 180
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
S R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q L CDMLLRD+P IVT
Sbjct: 181 SARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLSCDMLLRDSPAGIVT 240
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
QSPSIMDLVKC+GAA Y G+ + +GV PTE+Q+ DI WLL NH D TGLSTDSL +AG
Sbjct: 241 QSPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQISDIVEWLLANHSDSTGLSTDSLGDAG 300
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YP AA LG AVCGMA A IT DFLFWFRSHT KE+KWGGAKHHPE KD+G +MHPRSSF
Sbjct: 301 YPRAAALGDAVCGMAVAYITKGDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSSF 360
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQ--GNTQQNGSKM--Q 608
KAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E DSKV G Q G M Q
Sbjct: 361 KAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEVMDSKVNAAGAVQPLGENMTEQ 419
Query: 609 GVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVV 668
G++E+ +VA EMVRLIETAT PIF VD G INGWNAK+AELTGL E+MGKSL+ +++
Sbjct: 420 GMEEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEESMGKSLVRDLI 479
Query: 669 HEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVC 728
++E++ V+ L+ AL G+E KNVE+KL+ F+ Q Q V+I+VNAC+S+DY NN+ GVC
Sbjct: 480 YKENEETVDRLLSGALRGDEGKNVEVKLKTFDPQLQGKAVFIVVNACSSKDYLNNIVGVC 539
Query: 729 FVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWM 788
F+GQD+T +K++MDKFI ++GDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW
Sbjct: 540 FMGQDVTSQKIVMDKFINIKGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWP 599
Query: 789 RHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGK+L +E+FG+ CR+K D LTKFMI+L
Sbjct: 600 RSEVIGKLLVKEVFGSCCRLKDPDTLTKFMIVL 632
>gi|406685517|gb|AFS51199.1| phytochrome P, partial [Halocarpus bidwillii]
Length = 584
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/587 (73%), Positives = 491/587 (83%), Gaps = 18/587 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNG----LIG 136
AYLS++QRGG IQPFGCMLAVEE TF+II YS+N LEMLD+ S+S + +L IG
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFKIIAYSQNALEMLDIMSQSVPNMDLGKPGTLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEP 196
D RTLFTP S +L KA+ ++EISL+NPI VHS KPFYAI+HRIDVG+VIDLEP
Sbjct: 61 TDVRTLFTPASARALEKASMAQEISLMNPIWVHSQYSG--KPFYAIVHRIDVGMVIDLEP 118
Query: 197 SKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNF 256
++GD A+S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y F
Sbjct: 119 VRTGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRQLTGYDRVMVYKF 178
Query: 257 HDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSK 316
H+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS+
Sbjct: 179 HEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVIQSE 238
Query: 317 ELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS----------MKLWGL 366
EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D MKLWGL
Sbjct: 239 ELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGKSGGSSMKLWGL 298
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDA
Sbjct: 299 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDA 358
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGLSTD
Sbjct: 359 PIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLSTD 418
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 419 SLADAGYPGATSLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 478
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N +K + + N K
Sbjct: 479 HPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN-TKTMVHARLNDLK 537
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGL 653
+QG+DELS VA EMVRLIETATAPI VDS+G +NGWNAKVAELTGL
Sbjct: 538 LQGIDELSCVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGL 584
>gi|363547657|gb|AEW26871.1| phytochrome P [Dioon edule]
Length = 590
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/599 (72%), Positives = 501/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE TFRII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPAS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +H S K FYAI+HRIDVG+VID EP+ GD A+S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHGKSSG--KAFYAIVHRIDVGMVIDFEPA--GDAAMSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV V+Q+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM NMGSIA+LVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEF
Sbjct: 235 TLRAPHGCHAQYMANMGSIATLVMAVVVNG--NMKLWGLVVCHHTSPRAVPFPVRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL H D TGLSTDSLAEAGYPGAA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPPEAQIKDIAAWLLECHADWTGLSTDSLAEAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
A+IT+KDFLFWFRSHTAKE+KWGGAKHHP+ +D+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ ++ ++K + + N ++QG+DELSS+A EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDTETKTMIHARLNDLRVQGMDELSSIASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+C AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLCHALRG 590
>gi|363547544|gb|AEW26815.1| phytochrome P [Cycas ferruginea]
Length = 589
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDCHA PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCHATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++ +K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSKTKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547550|gb|AEW26818.1| phytochrome P [Cycas hainanensis]
Length = 589
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/597 (73%), Positives = 503/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCM+AVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMIAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPIL+ SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPILM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547802|gb|AEW26941.1| phytochrome P [Macrozamia mountperriensis]
Length = 590
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/598 (73%), Positives = 502/598 (83%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENPVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEGVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVGVIQAAELRQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHT PR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTCPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EM RLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547519|gb|AEW26803.1| phytochrome P [Cycas chamaoensis]
Length = 589
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AVIIN ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAPHGCHSQYMANMGSIASLVLAVIING--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547554|gb|AEW26820.1| phytochrome P [Cycas lindstromii]
Length = 589
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/597 (73%), Positives = 503/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GKDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIIHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYRFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAPHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547782|gb|AEW26932.1| phytochrome P [Macrozamia elegans]
Length = 590
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/598 (73%), Positives = 502/598 (83%), Gaps = 13/598 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSA 59
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAAA++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AG
Sbjct: 60 LSLEKAAAAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NM SIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMCSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA G AVCGMA
Sbjct: 354 YYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASPGDAVCGMAA 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARIT+KDFLFWF SHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 414 ARITAKDFLFWFGSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWEN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EMVRLIETAT
Sbjct: 474 VEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 533 APILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 590
>gi|363547562|gb|AEW26824.1| phytochrome P [Cycas media subsp. media]
Length = 589
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQSAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547886|gb|AEW26983.1| phytochrome P [Zamia skinneri]
Length = 590
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/596 (72%), Positives = 498/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EKNIL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKNILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++ +K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547621|gb|AEW26853.1| phytochrome P [Cycas xipholepis]
Length = 589
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFPLRYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPLRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547603|gb|AEW26844.1| phytochrome P [Cycas siamensis]
Length = 589
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAPHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDG ALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGTALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547665|gb|AEW26875.1| phytochrome P [Dioon tomasellii]
Length = 590
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/599 (72%), Positives = 501/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE TFRII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPAS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +H S K FYAI+HRIDVG+VID EP+ GD A+S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHGKSSG--KAFYAIVHRIDVGMVIDFEPA--GDAAMSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV V+Q+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM NMGSIASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEF
Sbjct: 235 TLRAPHGCHAQYMANMGSIASLVMAVVVNG--NMKLWGLVVCHHTSPRAVPFPVRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL M+LQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMDLQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL H D TGLSTDSLAEAGYPGAA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
A+IT+KDFLFWFRSHTAKE+KWGGAKHHP+ +D+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ ++ ++K + + N ++QG+DELSS+A EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDTETKTMIHARLNDLRVQGMDELSSIASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+C AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLCHALRG 590
>gi|363547585|gb|AEW26835.1| phytochrome P [Cycas platyphylla]
Length = 589
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHYQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GWRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547615|gb|AEW26850.1| phytochrome P [Cycas tansachana]
Length = 589
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAPHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++ +EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLAYEESVETVERLLYHALKG 589
>gi|363547581|gb|AEW26833.1| phytochrome P [Cycas pectinata]
Length = 589
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EI L+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEIGLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAPHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547515|gb|AEW26801.1| phytochrome P [Cycas cairnsiana]
Length = 589
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIW--TRSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDKHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHYQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KD+A WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDMADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547623|gb|AEW26854.1| phytochrome P [Cycas yorkiana]
Length = 589
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAVHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547527|gb|AEW26807.1| phytochrome P [Cycas clivicola]
Length = 589
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHCPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAPHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547552|gb|AEW26819.1| phytochrome P [Cycas hongheensis]
gi|363547611|gb|AEW26848.1| phytochrome P [Cycas taitungensis]
Length = 589
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|218683901|gb|ACL00905.1| phytochrome D [Arabidopsis lyrata]
Length = 636
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/636 (66%), Positives = 508/636 (79%), Gaps = 16/636 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVV+ V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVCAISHLQSLPGGDIKLLCDTVVDSVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVV 368
+CLV STLR+PHGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVV
Sbjct: 121 ICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGGLNTGGRNSMRLWGLVV 180
Query: 369 CHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPF 428
CHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P
Sbjct: 181 CHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPT 240
Query: 429 SIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSL 488
IVTQ PSIMDLVKC+GAA Y G+ + +GV PTE+Q+ DI WLL NH D TGLSTDSL
Sbjct: 241 GIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIVEWLLANHSDSTGLSTDSL 300
Query: 489 AEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHP 548
+AGYP AA LG AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +MHP
Sbjct: 301 GDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHP 360
Query: 549 RSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM 607
RSSF+AFLEVVK++ PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M
Sbjct: 361 RSSFQAFLEVVKSQCQPWETAEMDAIHSLQLILRDSFKESEAMDSKASAPGGVQPHGDDM 420
Query: 608 --QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLID 665
QG+ E+ +VA EM+RLIETAT PIF VD G INGWNAK+AELTGL EAMGKSL+
Sbjct: 421 AEQGMQEIGAVAREMIRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVR 480
Query: 666 EVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVK 725
+++++E + + L+ AL G+E KNVE+KLR F + Q V+++VNAC+S+DY NN+
Sbjct: 481 DLIYKEYKETADRLLSCALKGDEGKNVEVKLRTFGPELQGKAVFVVVNACSSKDYLNNIV 540
Query: 726 GVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVT 785
GVCFVGQD+T K +MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+T
Sbjct: 541 GVCFVGQDVTGHKFVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMEKLT 600
Query: 786 GWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
GW R EVIGK+L RE+FG+ CR+KG D LTKFMI+L
Sbjct: 601 GWPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 636
>gi|363547773|gb|AEW26928.1| phytochrome P [Lepidozamia peroffskyana]
Length = 590
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/596 (73%), Positives = 502/596 (84%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S S
Sbjct: 2 IQPFGCMLAVEECTFRIIAYSENAVGMLDLAPQSVPTMEQEFLTIGTDIRTLFTPSSALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NPI +HS RS KPFYA++HRIDVG+VID EP GD A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPIWMHS--RSSGKPFYAVVHRIDVGMVIDFEPV--GDAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQSLPVGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+P+ DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPSTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL+Q
Sbjct: 238 APHGCHAQYMVNMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKRILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTP E+Q++DIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWVLGVTPAEAQIEDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547599|gb|AEW26842.1| phytochrome P [Cycas semota]
Length = 589
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHYQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDL KCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLAKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|218683897|gb|ACL00903.1| phytochrome D [Arabidopsis halleri]
Length = 635
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/635 (66%), Positives = 509/635 (80%), Gaps = 15/635 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVC 369
+CLV STLR+PHGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVC
Sbjct: 121 ICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVC 180
Query: 370 HHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFS 429
HHTS R IPFPLR ACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P
Sbjct: 181 HHTSARCIPFPLRCACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPTG 240
Query: 430 IVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLA 489
IVTQ PSIMDLVKC+GAA Y G+ + +GV PTE+Q+ DI WLL NH D TGLSTDSL
Sbjct: 241 IVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIVEWLLANHSDSTGLSTDSLG 300
Query: 490 EAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPR 549
+AGYP AA LG AVCGMA A IT +DFLFWFRSHT KE++WGGAKHHPE KD+G +MHPR
Sbjct: 301 DAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIRWGGAKHHPEDKDDGQRMHPR 360
Query: 550 SSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM- 607
+SF+AFLEVVK+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M
Sbjct: 361 ASFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKASAPGGVQPHGDDMA 420
Query: 608 -QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
QG+ E+ +VA EM+RLIETAT PIF VD G INGWNAK+AELTGL EAMGKSL+ +
Sbjct: 421 EQGLQEIGTVAREMIRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVRD 480
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
++++E + + L+ AL G+E KNVE+KL+ F + Q V+++VNAC+S+DY NN+ G
Sbjct: 481 LIYKEYEETADRLLSCALKGDEGKNVEVKLKTFAPELQGKAVFVVVNACSSKDYLNNIVG 540
Query: 727 VCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTG 786
VCFVGQD+T K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TG
Sbjct: 541 VCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMEKLTG 600
Query: 787 WMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
W R EVIGK+L RE+FG+ CR+KG D LTKFMI+L
Sbjct: 601 WPRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 635
>gi|363547901|gb|AEW26990.1| phytochrome P [Pinus strobus]
Length = 590
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/598 (73%), Positives = 502/598 (83%), Gaps = 11/598 (1%)
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGA 149
+IQPFGC+LAVEE TFRII YSEN +EMLDL +S E L IG D RT FT S
Sbjct: 1 IIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQEVLTIGTDVRTQFTAASSH 60
Query: 150 SLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VIDLEP GD +S AG
Sbjct: 61 SLEKAAVTQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDLEPL--GDAFMSAAG 115
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
AVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV EI
Sbjct: 116 AVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVFEI 175
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS+EL QPLCLV ST
Sbjct: 176 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGST 235
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFL 388
LR+PHGCH QYM NMGSIASLVMAVIIN +MKLWGLVVCHHTSPR +PFPLRYACEFL
Sbjct: 236 LRAPHGCHAQYMANMGSIASLVMAVIING--NMKLWGLVVCHHTSPRPVPFPLRYACEFL 293
Query: 389 VQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAAL 448
+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLR AP IVTQSPSIMDLVKCDGAAL
Sbjct: 294 MQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRHAPMGIVTQSPSIMDLVKCDGAAL 353
Query: 449 YYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMAT 508
YYGG+CW++GVTPTE+Q+KDIA WLL +HGD TGLSTDSLA+AGYPGAA LG AVCGMA+
Sbjct: 354 YYGGKCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMAS 413
Query: 509 ARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEV 568
ARITSKDF+FWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PW+
Sbjct: 414 ARITSKDFIFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWDN 473
Query: 569 SEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETAT 628
EI+AIHSLQ+++R SFQ++++ +K ++Q N ++QG+DELSSVA EMVRLIETAT
Sbjct: 474 VEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSQLNDLRLQGIDELSSVASEMVRLIETAT 532
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
API VD +G +NGWNAKVAELTGLP EAMG SL+ ++V EES +VE ++ AL G
Sbjct: 533 APILAVDYNGCVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEESVESVEKMLYNALRG 590
>gi|406685609|gb|AFS51245.1| phytochrome P, partial [Podocarpus totara]
Length = 600
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/589 (72%), Positives = 489/589 (83%), Gaps = 13/589 (2%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D RTLFTP S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+VIDL
Sbjct: 15 IGTDVRTLFTPSSARALEKAATAPDISLMNPIWVHSQCSG--KPFNAIVHRIDVGMVIDL 72
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y
Sbjct: 73 EPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVY 132
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ
Sbjct: 133 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 192
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKLW 364
S+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKLW
Sbjct: 193 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKLW 252
Query: 365 GLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLR 424
GLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLR
Sbjct: 253 GLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 312
Query: 425 DAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLS 484
DAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGLS
Sbjct: 313 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLS 372
Query: 485 TDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGG 544
TDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 373 TDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 432
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNG 604
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 433 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLTD 491
Query: 605 SKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLI 664
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL+
Sbjct: 492 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 551
Query: 665 DEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
+VV EES +E ++ RAL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 552 HDVVLEESAECLEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|363547663|gb|AEW26874.1| phytochrome P [Dioon spinulosum]
Length = 590
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/596 (72%), Positives = 500/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S S
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMEQEFLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NPI +H S K FYAI+HRIDVG+VID EP+ GD A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPIWMHGKSSG--KAFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV V+Q+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NM SIASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMRSIASLVMAVVVNG--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W +GVTP E+Q+KDIA WLL H D TGLSTDSLAEAGYPGAA LG AVCGMA A+
Sbjct: 356 GGMVWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDAVCGMAAAK 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ +D+G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSS+A EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGMDELSSIASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+C AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLCHALRG 590
>gi|363547655|gb|AEW26870.1| phytochrome P [Zamia restrepoi]
gi|363547862|gb|AEW26971.1| phytochrome P [Zamia manicata]
gi|363547864|gb|AEW26972.1| phytochrome P [Zamia muricata]
Length = 590
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/596 (72%), Positives = 498/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++ +K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547556|gb|AEW26821.1| phytochrome P [Cycas litoralis]
Length = 589
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLSMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547587|gb|AEW26836.1| phytochrome P [Cycas revoluta]
Length = 589
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQ+ MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQVNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547533|gb|AEW26810.1| phytochrome P [Cycas couttsiana]
Length = 589
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASL++AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHYQYMANMGSIASLILAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGW+AKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWDAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547893|gb|AEW26986.1| phytochrome P [Ginkgo biloba]
Length = 590
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/596 (73%), Positives = 492/596 (82%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGCML VE+ TFRII YSEN +EMLDL S E L IG D RTLFTP S S
Sbjct: 2 IQPFGCMLTVEDITFRIIAYSENAVEMLDLIPNSVPSMEEEVLAIGTDVRTLFTPSSALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NPI +H KPFYAI+HRIDVG+VID EP GD +LS AGAV
Sbjct: 62 LEKAAAAKEISLMNPIWMHCKHSG--KPFYAIVHRIDVGMVIDFEPV--GDASLSAAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQ++PGGDI LLCDTVVEDV+ LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQSIPGGDISLLCDTVVEDVRDLTGYDRVMVYKFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ +EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCCATPVKVIQDEELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
PHGCH QYM NMGSIASLVMAVIIN +MKLWGLVVCHHTSPR +PFPLRYACEFL+Q
Sbjct: 238 XPHGCHAQYMANMGSIASLVMAVIING--TMKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF L L MELQ+ QL EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLXLNMELQLGAQLXEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG WL+GVTPTE+Q+KDIA WLL H D TGLSTDSLA+AGYPGA LG AVCGMA AR
Sbjct: 356 GGMFWLLGVTPTEAQIKDIADWLLEYHADSTGLSTDSLADAGYPGAPSLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAKVAELTGLP EAMGKSL+ ++V EES VE L+ AL G
Sbjct: 535 ILAVDSGGLVNGWNAKVAELTGLPVGEAMGKSLVHDLVFEESVETVEKLLYHALRG 590
>gi|363547717|gb|AEW26901.1| phytochrome P [Encephalartos lanatus]
Length = 590
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/599 (72%), Positives = 501/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A+S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAAMSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGD+GLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDVGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547868|gb|AEW26974.1| phytochrome P [Zamia obliqua]
Length = 590
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/596 (72%), Positives = 499/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS++SLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVSSLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547503|gb|AEW26795.1| phytochrome P [Cycas apoa]
Length = 589
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSE+ +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSEDAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547593|gb|AEW26839.1| phytochrome P [Cycas schumanniana]
Length = 589
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+ I YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKTIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547505|gb|AEW26796.1| phytochrome P [Cycas armstrongii]
Length = 589
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTL TP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLLTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|406685645|gb|AFS51263.1| phytochrome P, partial [Picea glauca]
Length = 584
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/588 (73%), Positives = 495/588 (84%), Gaps = 19/588 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TFRII YSEN +EMLDL +S E +L L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQLEVLTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P K+GD +S AGAVQSQKLAV AISRLQ+LP GDI LLCD+VVE+V++LTGYDRVM+Y
Sbjct: 118 PLKTGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDSVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGSIASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEF++QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K +++ N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLP 654
+QG+DELSSVA EMVRLIETATAPI VD +G +NGWNAKVAELTGLP
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLP 584
>gi|363547507|gb|AEW26797.1| phytochrome P [Cycas basaltica]
Length = 589
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAVHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIE ATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMMHARLNDLRVQGIDELSSVASEMVRLIEAATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547601|gb|AEW26843.1| phytochrome P [Cycas sexseminifera]
gi|363547613|gb|AEW26849.1| phytochrome P [Cycas tanqingii]
Length = 589
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547579|gb|AEW26832.1| phytochrome P [Cycas pectinata]
Length = 589
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV ISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRTISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAPHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAK VKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKGVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547575|gb|AEW26830.1| phytochrome P [Cycas ophiolitica]
Length = 589
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAVHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+ GYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADTGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547541|gb|AEW26814.1| phytochrome P [Cycas edentata]
gi|363547567|gb|AEW26826.1| phytochrome P [Cycas micronesica]
gi|363547625|gb|AEW26855.1| phytochrome P [Cycas zeylanica]
Length = 589
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|406685657|gb|AFS51269.1| phytochrome P, partial [Tsuga canadensis]
Length = 584
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/588 (73%), Positives = 493/588 (83%), Gaps = 19/588 (3%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IG 136
AYLS+IQRGG IQPFGC+LAVEE TF II YSEN +EMLDL +S E + L IG
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFTIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 137 IDARTLFTPPSGASLAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLE 195
D RTLFT S SL KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VID E
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFE 117
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P ++GD +S AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y
Sbjct: 118 PLRTGDAVMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYK 177
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS
Sbjct: 178 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQS 237
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGL 366
+EL QPLCLV STLR+PHGCH QYM NMGS+ASLVMAVIIN D SMKLWGL
Sbjct: 238 EELMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGL 297
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDA
Sbjct: 298 VVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDA 357
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQSPSIMDL+KCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTD
Sbjct: 358 PIGIVTQSPSIMDLIKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTD 417
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+AGYPGAA LG AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +M
Sbjct: 418 SLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 477
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PW+ EI+AIHSLQ+++R SFQ++++ +K + + N +
Sbjct: 478 HPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSG-TKTMVHARLNDLR 536
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLP 654
+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWN KVAELTGLP
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNGKVAELTGLP 584
>gi|363547517|gb|AEW26802.1| phytochrome P [Cycas calcicola]
Length = 589
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTLIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAK+AELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKMAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547569|gb|AEW26827.1| phytochrome P [Cycas revoluta]
Length = 589
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPR+SFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRTSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547889|gb|AEW26984.1| phytochrome P [Zamia standleyi]
Length = 590
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/596 (72%), Positives = 498/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDKGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I V S G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVSSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547858|gb|AEW26969.1| phytochrome P [Zamia lecointei]
Length = 590
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/596 (72%), Positives = 497/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEEHTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSESSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMA ++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAAVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++ +K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|406685597|gb|AFS51239.1| phytochrome P, partial [Podocarpus rumphii]
Length = 600
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/589 (72%), Positives = 489/589 (83%), Gaps = 13/589 (2%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D RTLFTP S +L KAA + +ISL+NPI VHS+ KPF AI+HRIDVG+VIDL
Sbjct: 15 IGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSG--KPFNAIVHRIDVGMVIDL 72
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP ++G+ A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y
Sbjct: 73 EPRRTGEAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVY 132
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ
Sbjct: 133 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 192
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKLW 364
S+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKLW
Sbjct: 193 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLW 252
Query: 365 GLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLR 424
GLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLR
Sbjct: 253 GLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 312
Query: 425 DAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLS 484
DAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGLS
Sbjct: 313 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLS 372
Query: 485 TDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGG 544
TDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 373 TDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 432
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNG 604
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 433 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMAHARLTD 491
Query: 605 SKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLI 664
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL+
Sbjct: 492 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 551
Query: 665 DEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
+VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 552 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|363547573|gb|AEW26829.1| phytochrome P [Cycas nongnoochiae]
Length = 589
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/597 (73%), Positives = 502/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAPHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NG NAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGRNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALKG 589
>gi|363547539|gb|AEW26813.1| phytochrome P [Cycas dolichophylla]
Length = 589
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++E+SL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEMSLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547697|gb|AEW26891.1| phytochrome P [Encephalartos friderici-guilielmi]
Length = 589
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/599 (72%), Positives = 500/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 1 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 57
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A+S+A
Sbjct: 58 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAAMSVA 113
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 114 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 173
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 174 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 233
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHH SPR +PFPLRYACEF
Sbjct: 234 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHASPRAVPFPLRYACEF 291
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 292 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 351
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 352 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMA 411
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 412 AARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 471
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 472 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 530
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 589
>gi|363547609|gb|AEW26847.1| phytochrome P [Cycas szechuanensis]
Length = 589
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ A G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHASRG 589
>gi|363547560|gb|AEW26823.1| phytochrome P [Cycas macrocarpa]
Length = 589
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y F +D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFREDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547619|gb|AEW26852.1| phytochrome P [Cycas tropophylla]
Length = 589
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 499/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA +REISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAREISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDM LRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMFLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSL +AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLVDAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGLSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547546|gb|AEW26816.1| phytochrome P [Cycas fugax]
Length = 589
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/597 (73%), Positives = 501/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQ+LPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQSLPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAAPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AV IN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVSINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMLWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547866|gb|AEW26973.1| phytochrome P [Zamia neurophyllidia]
Length = 590
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/596 (72%), Positives = 496/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGA
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAA 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPG A LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGTASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++ +K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547836|gb|AEW26958.1| phytochrome P [Zamia elegantissima]
Length = 590
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/596 (72%), Positives = 497/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPIRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL H D TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHSDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD KMHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDESRKMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMG+SL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGRSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547523|gb|AEW26805.1| phytochrome P [Cycas chevalieri]
Length = 589
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/597 (73%), Positives = 500/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQ+LAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQRLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GV PTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVAPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547595|gb|AEW26840.1| phytochrome P [Cycas seemannii]
Length = 589
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/597 (73%), Positives = 500/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV +IQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKIIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG S + ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSFVHDLVYEESVETVERLLYHALRG 589
>gi|363547826|gb|AEW26953.1| phytochrome P [Zamia acuminata]
Length = 590
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/596 (72%), Positives = 496/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAA ++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAVAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+ QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ ++ ++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547558|gb|AEW26822.1| phytochrome P [Cycas maconochiei]
Length = 589
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 500/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQK AV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKPAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+R LF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRSLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFPLRYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPLRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAPF IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547617|gb|AEW26851.1| phytochrome P [Cycas thouarsii]
Length = 589
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/597 (73%), Positives = 499/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPLSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFY I+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYVIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547709|gb|AEW26897.1| phytochrome P [Encephalartos inopinus]
Length = 590
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/599 (72%), Positives = 499/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDCHA PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCHATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLV+AV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVVAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL H D TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHSDWTGLSTDSLADAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547583|gb|AEW26834.1| phytochrome P [Cycas petraea]
Length = 589
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/597 (73%), Positives = 500/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D R LFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRALFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PW
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWGNV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547513|gb|AEW26800.1| phytochrome P [Cycas brachycantha]
Length = 589
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/597 (73%), Positives = 500/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+V D EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVTDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQ+LAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQELAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547571|gb|AEW26828.1| phytochrome P [Cycas multipinnata]
Length = 589
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/597 (73%), Positives = 500/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIG LCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGPLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|406685599|gb|AFS51240.1| phytochrome P, partial [Podocarpus salignus]
Length = 600
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/589 (72%), Positives = 487/589 (82%), Gaps = 13/589 (2%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D RTLFTP S +L KAA + +ISL+NPI VHS KP AI+HRIDVG+VIDL
Sbjct: 15 IGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSG--KPINAIVHRIDVGMVIDL 72
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y
Sbjct: 73 EPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVY 132
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ
Sbjct: 133 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQ 192
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKLW 364
S+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKLW
Sbjct: 193 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLW 252
Query: 365 GLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLR 424
GLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLR
Sbjct: 253 GLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 312
Query: 425 DAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLS 484
DAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGLS
Sbjct: 313 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLS 372
Query: 485 TDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGG 544
TDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 373 TDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 432
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNG 604
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 433 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLTD 491
Query: 605 SKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLI 664
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL+
Sbjct: 492 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 551
Query: 665 DEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
+VV EE VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 552 HDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|363547707|gb|AEW26896.1| phytochrome P [Encephalartos humilis]
Length = 590
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/599 (72%), Positives = 499/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A+S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAAMSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEV +E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVAAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLS DSLA+AGYPGAA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSMDSLADAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547529|gb|AEW26808.1| phytochrome P [Cycas collina]
Length = 589
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/597 (73%), Positives = 499/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SR KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRCSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGATSLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547537|gb|AEW26812.1| phytochrome P [Cycas diannanensis]
Length = 589
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/597 (73%), Positives = 500/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+V+D EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVVDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+ +PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLRYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKQRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|363547521|gb|AEW26804.1| phytochrome P [Cycas chamberlainii]
gi|363547589|gb|AEW26837.1| phytochrome P [Cycas riuminiana]
Length = 589
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/597 (73%), Positives = 499/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLE YLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLERYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKRILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|406685479|gb|AFS51180.1| phytochrome P, partial [Araucaria rulei]
Length = 617
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/600 (71%), Positives = 493/600 (82%), Gaps = 24/600 (4%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D RTLFT S +L KAA + EISL+NPI VHS ++ KPFYAI+HRIDVG+V+DL
Sbjct: 21 IGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRIDVGMVMDL 78
Query: 195 EPSKSG-----DPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYD 249
EP ++G D ALS AGAVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYD
Sbjct: 79 EPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYD 138
Query: 250 RVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIP 309
RVM+Y FH+D+HGEV++EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A P
Sbjct: 139 RVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAAP 198
Query: 310 VMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS--------- 360
V VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN +
Sbjct: 199 VKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGGGGSG 258
Query: 361 -------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILR 413
MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILR
Sbjct: 259 SGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILR 318
Query: 414 TQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWL 473
TQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALYYGG CW++GVTPTE+Q+KDIA WL
Sbjct: 319 TQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWL 378
Query: 474 LNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGA 533
L H D TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGA
Sbjct: 379 LEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGA 438
Query: 534 KHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEEND 593
KHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N
Sbjct: 439 KHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN- 497
Query: 594 SKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGL 653
+K + + N K+QG+DELS VA EMVRLIETATAPI VDS+G INGWNAKVAELTGL
Sbjct: 498 TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGL 557
Query: 654 PASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
P EAMGKSL+ +++ EES V+ ++ +AL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 558 PVGEAMGKSLVHDLIFEESANTVDKMLYQALRGEEEKNVEIKLRTFGPQKQKKAIYLVVN 617
>gi|363547852|gb|AEW26966.1| phytochrome P [Zamia kickxii]
Length = 590
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/596 (72%), Positives = 495/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAA ++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAVAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGVAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+ QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ ++ ++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547607|gb|AEW26846.1| phytochrome P [Cycas sphaerica]
Length = 589
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/597 (73%), Positives = 500/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAVHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK++LRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHMLRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSL +AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLGDAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547659|gb|AEW26872.1| phytochrome P [Dioon merolae]
Length = 590
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/599 (71%), Positives = 499/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVE+ TFRII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEKGTFRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPAS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +H S K FYAI+HRIDVG+VID EP+ GD A+S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHGKSSG--KAFYAIVHRIDVGMVIDFEPA--GDAAMSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEP LG+H+PA DIPQA+RFLF QNRVRMICDC A PV V+Q+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPCLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM NMGSIASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEF
Sbjct: 235 TLRAPHGCHAQYMANMGSIASLVMAVVVNG--NMKLWGLVVCHHTSPRAVPFPVRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL H D TGLSTDSLAEAGYPGAA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
A+IT+KDFLFWFRSHTAKE+KWGGAKHHP+ +D+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ ++ ++K + + N ++QG+DELSS+A EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDTETKTMIHARLNDLRVQGMDELSSIASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+EES VE L+C AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLCHALRG 590
>gi|363547870|gb|AEW26975.1| phytochrome P [Zamia paucijuga]
Length = 590
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 497/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+P DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I V+S G +NGWNAK+AELTGLP EAMGK L+ ++++EES VE L+ AL G
Sbjct: 535 ILAVNSGGFVNGWNAKLAELTGLPVGEAMGKPLVCDLIYEESMETVERLLHHALRG 590
>gi|363547860|gb|AEW26970.1| phytochrome P [Zamia loddigesii]
Length = 590
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 497/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ + S S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMQSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQA+PGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQAMPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+P DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++D+K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSDTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I V+S G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547565|gb|AEW26825.1| phytochrome P [Cycas micholitzii]
Length = 589
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/597 (73%), Positives = 500/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+ RIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVPRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAPHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGY GAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYTGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIET TA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETVTA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|218683941|gb|ACL00924.1| phytochrome D [Thlaspi perfoliatum]
Length = 631
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/633 (65%), Positives = 510/633 (80%), Gaps = 15/633 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAV SQKLAV AIS LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVHSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEV++E +R DLEPY+G+H+PA DIPQA+RFLF+Q+RVRMI DCHA PV V+Q L Q
Sbjct: 61 GEVIAESKRDDLEPYIGLHYPATDIPQASRFLFRQSRVRMIVDCHASPVRVVQEDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------------SMKLWGLVV 368
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN + SM+LWGL+V
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLGMAVIINGNEEDGNGVNNGGGRNSMRLWGLIV 180
Query: 369 CHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPF 428
CHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+QLAEK +LR Q LLCDMLLRD+P
Sbjct: 181 CHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQLAEKRVLRMQTLLCDMLLRDSPA 240
Query: 429 SIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSL 488
IVTQSPSIMDLVKC+GAA Y G+ + +GV P+E+Q+ +I WLL NH D TGL TDSL
Sbjct: 241 GIVTQSPSIMDLVKCNGAAFLYQGKYYSLGVAPSEAQINEIVEWLLANHSDSTGLGTDSL 300
Query: 489 AEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHP 548
+AGYP A++LG AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +MHP
Sbjct: 301 GDAGYPRASVLGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHP 360
Query: 549 RSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQ 608
RSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E DS ++N ++ Q
Sbjct: 361 RSSFKAFLEVVKSRSQPWEAAEMDAIHSLQLILRDSFKE-SEARDSIAIAAERENMTE-Q 418
Query: 609 GVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVV 668
G++E+ +VA EMVRLIETA PIF VD G INGWNAK+AELTGL EAMGKS+I +++
Sbjct: 419 GMEEIGAVAREMVRLIETARVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSVIRDLI 478
Query: 669 HEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVC 728
+++ + AV+ L+ RAL G+E +NVE+KL+ F + Q V+++VNAC+S+DY +N+ GVC
Sbjct: 479 YKDCEEAVDMLLSRALKGDEGENVEVKLKTFGPELQGKAVFVVVNACSSKDYSSNIVGVC 538
Query: 729 FVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWM 788
FVGQD+T +K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+T W
Sbjct: 539 FVGQDVTSQKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMEKLTSWS 598
Query: 789 RHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R +VIGK+L +E+FG+ CR++G D LTKFMI+L
Sbjct: 599 RSQVIGKLLVKEVFGSCCRLRGPDELTKFMIVL 631
>gi|363547878|gb|AEW26979.1| phytochrome P [Zamia pseudomonticola]
Length = 590
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 497/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++G+TPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGMTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTA E+KWGGAKHH + KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTANEIKWGGAKHHTDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547525|gb|AEW26806.1| phytochrome P [Cycas circinalis]
Length = 589
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/597 (73%), Positives = 500/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAVHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK++LRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHMLRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGRLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547850|gb|AEW26965.1| phytochrome P [Zamia katzeriana]
Length = 590
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 497/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ + S S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMQSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+P DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I V+S G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547769|gb|AEW26926.1| phytochrome P [Encephalartos woodii]
Length = 590
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/599 (72%), Positives = 498/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ ++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-GDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547591|gb|AEW26838.1| phytochrome P [Cycas rumphii]
Length = 589
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/597 (73%), Positives = 500/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALP GDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPRGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIP+A+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|327241204|gb|AEA40446.1| phytochrome A type 3 [Triticum aestivum]
Length = 1130
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/950 (47%), Positives = 621/950 (65%), Gaps = 36/950 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVIS---PPEGVPE---EQITAYLSKIQRGG 91
++ DA L AEFE+S SF+YS+ V + P + E E++ AYL IQRG
Sbjct: 22 VLAQTTLDAQLNAEFEES---SDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHIQRGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSG 148
+IQ FGC+LA++E +F +I +SEN EML S S D IG + R+LFT
Sbjct: 79 MIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTDQGA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
+L KA ++SLLNPILV S KPFYAI+HR +V+D EP + + AG
Sbjct: 139 TALHKALGFADVSLLNPILVQCKSSG--KPFYAIVHRATGCLVVDFEPVNPTEFPATAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AIS++QALPGG + LLC+TVV++V +LTGYDRVM Y FH+D+HGEV +EI
Sbjct: 197 ALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEI 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICD A + VI+ + L + L S
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSIKVIEDEALPFDISLCGSA 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMK---------------LWGLVVCHHTS 373
LR+ H CHLQYM NM SIASLVMAV++N + LWGLVVCHH S
Sbjct: 317 LRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCHHES 376
Query: 374 PRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVT 432
PRY+PFPLRYACEFL Q F++ + E +V QL EK+ILR Q +L DML ++A P +IV+
Sbjct: 377 PRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVS 436
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
+P+IMDL+KCDGAAL YGG+ W +G PTESQ++D+A WL H D TGLST+SL +AG
Sbjct: 437 GAPNIMDLIKCDGAALLYGGKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHDAG 496
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGA+ LG VCGMA A+I S D LFWFRSHTAKE++WGGAK+ P +D+ +MHPR SF
Sbjct: 497 YPGASALGDMVCGMAVAKINSNDILFWFRSHTAKEIRWGGAKNDPSDQDDSRRMHPRLSF 556
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK +S W SE++AIHSLQ+++R + + + K + Q K+ G+ E
Sbjct: 557 KAFLEVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPT-GKASLDEQIGDLKLDGLAE 615
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
L +V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S
Sbjct: 616 LQTVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESS 674
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQ 732
V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV Q
Sbjct: 675 VSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
D+T K++MDKF R++GDY+AII + NPLIPPIF +DE C EWNAAM K+TGW + EV
Sbjct: 735 DMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHKEEV 794
Query: 793 IGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVAL 849
+ KML E+F + C +K +D ++ + G+ TE PFGFF+R G++ E L
Sbjct: 795 LDKMLLGEVFDSRNASCLLKNKDAFVSLCAVINSALAGKETEKAPFGFFDRSGKYTECLL 854
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
+ +RR + +G + G FCF+ I +LQ AL+ Q + ++K +Y+R + NPL+G
Sbjct: 855 SVNRRQNEDGLITGVFCFIHIPSHELQQALQVQQASEQASLKRLKAFSYMRHAINNPLSG 914
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCI-EEGRCV 958
+ + K L+++ ++E Q + + SD C Q+ I+ +D I E+ C+
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDGIMEKSSCL 964
>gi|363547548|gb|AEW26817.1| phytochrome P [Cycas guizhouensis]
Length = 589
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/597 (73%), Positives = 499/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLW LVVCHHTS R IPFP+RY CEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWDLVVCHHTSVRAIPFPVRYVCEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGMDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 589
>gi|57281883|emb|CAC85512.1| phytochrome A [Triticum aestivum]
Length = 1130
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/950 (47%), Positives = 620/950 (65%), Gaps = 36/950 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVIS---PPEGVPE---EQITAYLSKIQRGG 91
++ DA L AEFE+S SF+YS+ V + P + E E++ AYL IQRG
Sbjct: 22 VLAQTTLDAELNAEFEES---SDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHIQRGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSG 148
+IQ FGC+LA++E +F +I +SEN EML S S D IG + R+LFT
Sbjct: 79 MIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTDQGA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
A+L KA ++SLLNPILV + KPFYAI+HR +V+D EP + + AG
Sbjct: 139 AALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVNPTEFPATAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AIS++QALPGG + LLC+TVV++V LTGYDRVM Y FH+D+HGEV +EI
Sbjct: 197 ALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVFAEI 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ LEPYLG+H+PA DIPQAARFLF +N+VR+ICD A P+ VI+ + L + L S
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLCGSA 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMK---------------LWGLVVCHHTS 373
LR+ H CHLQYM NM SIASLVMAV++N + LWGL+VCHH S
Sbjct: 317 LRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCHHES 376
Query: 374 PRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVT 432
PRY+PFPLRYACEFL Q F++ + E +V QL EK+ILR Q +L DML ++A P +IV+
Sbjct: 377 PRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVS 436
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
+P+IMDL+KCDGAAL YGG+ W +G PTESQ++D+A WL H D TGLST+SL +AG
Sbjct: 437 GAPNIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLHDAG 496
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGA+ LG VCGMA A+I S D LFWFRS TAKE++WGGAK+ P D+ +MHPR SF
Sbjct: 497 YPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRLSF 556
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK +S W SE++AIHSLQ+++R + + + K + Q K+ G+ E
Sbjct: 557 KAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPT-GKASLDEQIGDLKLDGLAE 615
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
L +V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S
Sbjct: 616 LQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESS 674
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQ 732
V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV Q
Sbjct: 675 VSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
D+T K++MDKF R++GDY AII + NPLIPPIF +DE+ C EWNAAM K+TGW R EV
Sbjct: 735 DMTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADESGWCCEWNAAMTKLTGWHREEV 794
Query: 793 IGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVAL 849
+ KML E+F + C +K +D +++ + G+ TE PFGFF+R G++ E L
Sbjct: 795 LDKMLLGEVFDSRNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTECLL 854
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
+ +RR + G + G FCF+ I +LQ AL+ Q + ++K +Y+R + NPL+G
Sbjct: 855 SVNRRQNEGGLITGVFCFIHIPSHELQQALQVQQASEQKSLKRLKAFSYMRHAINNPLSG 914
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCI-EEGRCV 958
+ + K L+++ ++E Q + + +D C Q+ I+ +D I E+ C+
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVADNCHHQLNKILADLDQHNIMEKSSCL 964
>gi|363547880|gb|AEW26980.1| phytochrome P [Zamia pumila]
Length = 590
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 495/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP + S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPANALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAA ++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAVAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGVAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+ QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ ++ ++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547687|gb|AEW26886.1| phytochrome P [Encephalartos cycadifolius]
Length = 590
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/599 (72%), Positives = 499/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A+S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAAMSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGG IGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGVIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
+E++AIHSLQ+++R SFQ++ ++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NAEMDAIHSLQLILRGSFQDI-HDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547842|gb|AEW26961.1| phytochrome P [Zamia furfuracea]
Length = 590
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/596 (71%), Positives = 497/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ + S S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMQSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+P DIPQA+RFLF QNRVRMICDC A P+ VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPIRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I V+S G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547738|gb|AEW26911.1| phytochrome P [Encephalartos ngoyanus]
Length = 590
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/599 (72%), Positives = 498/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVINVNP--KLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVAGEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547872|gb|AEW26976.1| phytochrome P [Zamia picta]
Length = 590
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 497/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ + S S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMQSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+P DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I V+S G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547744|gb|AEW26914.1| phytochrome P [Encephalartos princeps]
Length = 590
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/599 (71%), Positives = 498/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F +G D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---VGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQ ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQPNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
+E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NAEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547685|gb|AEW26885.1| phytochrome P [Encephalartos cupidus]
Length = 590
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/599 (72%), Positives = 498/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSF+AFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFEAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547671|gb|AEW26878.1| phytochrome P [Encephalartos aplanatus]
Length = 589
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/599 (72%), Positives = 499/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 1 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 57
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 58 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 113
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQ+LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 114 GAVQSQRLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 173
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 174 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 233
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 234 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 291
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 292 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 351
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 352 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMA 411
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 412 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 471
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 472 NVEMDAIHSLQLILRGSFQDI-DDSETKTTIHSRLNDLRVQSMDELSSVAGEMVRLIETA 530
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 589
>gi|363547511|gb|AEW26799.1| phytochrome P [Cycas bougainvilleana]
Length = 589
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/597 (73%), Positives = 499/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVGIVID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGIVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIG 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAK VKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKGVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547854|gb|AEW26967.1| phytochrome P [Zamia lacandona]
Length = 590
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/596 (72%), Positives = 497/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ + S S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMQSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHGQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGK L+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKPLVCDLIYEESMETVERLLHHALRG 590
>gi|363547848|gb|AEW26964.1| phytochrome P [Zamia ipetiensis]
Length = 590
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 495/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A V VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATTVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP I TQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIATQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+ DIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQITDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++ +K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547832|gb|AEW26956.1| phytochrome P [Zamia chigua]
Length = 590
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 496/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EIS +NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISFMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPG A LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGVASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS WE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLLWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547730|gb|AEW26907.1| phytochrome P [Encephalartos middelburgensis]
Length = 590
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/596 (72%), Positives = 498/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGC+LAVEE T+RII YSEN + MLDL +S E L IG D RTLFTP S S
Sbjct: 2 IQPFGCVLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEQEFLTIGTDVRTLFTPSSALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A+PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAMPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA AR
Sbjct: 356 GGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547844|gb|AEW26962.1| phytochrome P [Zamia hymenophyllidia]
Length = 590
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 497/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + +LDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGILDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+ +AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMPVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q + ELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRVQSMGELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|218683927|gb|ACL00917.1| phytochrome D [Aethionema oppositifolium]
Length = 634
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/635 (66%), Positives = 508/635 (80%), Gaps = 16/635 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAV SQKLAV AIS LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVHSQKLAVRAISHLQSLPGGDIKLLCDTVVERVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV V+Q L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-----------KDSMKLWGLVVCH 370
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN ++S++LWGLVVCH
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLGMAVIINGNEEDGNSSGGGRNSLRLWGLVVCH 180
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P I
Sbjct: 181 HTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGI 240
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
VTQSPSIMDLVKC+GAA Y GR + +GV P+E+Q+ DI WLL NH D TGLSTDSL +
Sbjct: 241 VTQSPSIMDLVKCNGAAFLYHGRYYSLGVAPSEAQINDIVEWLLANHSDSTGLSTDSLGD 300
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYP A LG AVCGMA A IT +DFLFWFRS T KE+KWGGAKHHPE KD+G +MHPRS
Sbjct: 301 AGYPRAPALGDAVCGMAVAFITKRDFLFWFRSQTEKEIKWGGAKHHPEDKDDGQRMHPRS 360
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNT--QQNGSKM- 607
SFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E DSK T Q +G +
Sbjct: 361 SFKAFLEVVKSRSQPWEAAEMDAIHSLQLILRDSFKE-SEAMDSKAIAATSVQPHGENLT 419
Query: 608 -QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
QG++E+ +VA EMVRLIETA PIF VD G INGWNAK+AE+TGL EAMGKSL+ +
Sbjct: 420 EQGMEEIGAVAREMVRLIETAAVPIFAVDIDGCINGWNAKIAEMTGLSVGEAMGKSLVCD 479
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
++++E + AV+ L+ RAL G+E KNVE+KL+ F Q V+++VNAC+S+DY N+ G
Sbjct: 480 LIYKEYEQAVDMLLSRALKGDEGKNVEVKLKTFGPGLQGKAVFVVVNACSSKDYLKNIVG 539
Query: 727 VCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTG 786
V FVGQD+T +K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TG
Sbjct: 540 VGFVGQDVTSQKIVMDKFINIQGDYKAIINSPNPLIPPIFAADENTCCIEWNTAMEKLTG 599
Query: 787 WMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
W R EVIGK+L +E+FG+ CR++G D LTKFMI+L
Sbjct: 600 WPRSEVIGKLLVKEVFGSCCRLRGPDELTKFMIVL 634
>gi|406685581|gb|AFS51231.1| phytochrome P, partial [Podocarpus matudae]
Length = 600
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/589 (72%), Positives = 487/589 (82%), Gaps = 13/589 (2%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D RTLFTP S +L KAA + +ISL+NPI VHS KPF AI+HRIDVG+V+DL
Sbjct: 15 IGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSG--KPFNAIVHRIDVGMVVDL 72
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y
Sbjct: 73 EPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVY 132
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ
Sbjct: 133 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQ 192
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKLW 364
S+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKLW
Sbjct: 193 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLW 252
Query: 365 GLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLR 424
GLVVCHHTSPR + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLR
Sbjct: 253 GLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 312
Query: 425 DAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLS 484
DAP IVTQSPSIMDLVKCDGAALYYGG +GVTPTE+Q+KDIA WLL HGD TGLS
Sbjct: 313 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTGCLGVTPTEAQIKDIAEWLLEYHGDSTGLS 372
Query: 485 TDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGG 544
TDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 373 TDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 432
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNG 604
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 433 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSR-TKTMVHARLTD 491
Query: 605 SKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLI 664
K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL+
Sbjct: 492 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 551
Query: 665 DEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
+VV EE VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 552 HDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|363547838|gb|AEW26959.1| phytochrome P [Zamia fairchildiana]
Length = 590
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 496/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++G+TPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGMTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTA E+KWGGAKHH + KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTANEIKWGGAKHHTDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ + ++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDPIYEESMETVERLLHHALRG 590
>gi|363547754|gb|AEW26919.1| phytochrome P [Encephalartos senticosus]
Length = 590
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/599 (72%), Positives = 497/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL K IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTGKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547711|gb|AEW26898.1| phytochrome P [Encephalartos ituriensis]
Length = 590
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/599 (71%), Positives = 498/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL E+ IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTERRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547903|gb|AEW26991.1| phytochrome P [Pseudotsuga menziesii]
Length = 590
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/597 (72%), Positives = 499/597 (83%), Gaps = 11/597 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGC+LAVEE TFRII YS N +EMLDL +S E L IG D RTLFT S S
Sbjct: 2 IQPFGCVLAVEETTFRIIAYSGNAVEMLDLAPQSVPSMEPEVLTIGTDVRTLFTAASANS 61
Query: 151 LAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
L KAA ++EISL+NPI VH NSR KPFYA++HRIDVG+VID EP GD +S AGA
Sbjct: 62 LEKAAVAQEISLMNPIWVHCKNSR---KPFYAVVHRIDVGMVIDFEPL--GDAFMSAAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y FH+D+ GEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHEDERGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV +IQS+EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKLIQSEELMQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGS+ASLVMAVIIN +MKLWGLVVCHHTSPR +PFPLRYACEFL+
Sbjct: 237 RAPHGCHAQYMANMGSVASLVMAVIING--NMKLWGLVVCHHTSPRAVPFPLRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTDSLA+AGYPGAA LG AVCGMA+A
Sbjct: 355 YGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
ITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RSFPW+
Sbjct: 415 IITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWDNV 474
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EI+AIHSLQ+++R SFQ++++ +K +++ N ++QG+DELSSVA EMVRLIETATA
Sbjct: 475 EIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLRLQGMDELSSVASEMVRLIETATA 533
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS+G +NGWNAKVAELTGLP EAM SL+ ++V EES VE ++ AL G
Sbjct: 534 PILAVDSNGLVNGWNAKVAELTGLPVGEAMSMSLVQDLVFEESVQRVEKMLNNALKG 590
>gi|406685607|gb|AFS51244.1| phytochrome P, partial [Podocarpus sylvestris]
Length = 600
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/589 (71%), Positives = 488/589 (82%), Gaps = 13/589 (2%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D RTLFTP S +L KAA + +ISL+NP+ VHS+ KPF AI+HRIDVG+VIDL
Sbjct: 15 IGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSG--KPFNAIVHRIDVGMVIDL 72
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP ++GD A+S AGAVQSQK AV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y
Sbjct: 73 EPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVY 132
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+D+HGEVV+EIRR+DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ
Sbjct: 133 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 192
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKLW 364
S+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKL
Sbjct: 193 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLR 252
Query: 365 GLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLR 424
GLVVCHHTS R + FPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLR
Sbjct: 253 GLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 312
Query: 425 DAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLS 484
DAP IVTQSPSIMDLVKCDGAALYYGG W +GVTPTE+Q+KDIA WLL HGD TGLS
Sbjct: 313 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLS 372
Query: 485 TDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGG 544
TDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 373 TDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 432
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNG 604
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ +K + +
Sbjct: 433 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLTD 491
Query: 605 SKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLI 664
K+QG+DELSSVA EMVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL+
Sbjct: 492 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 551
Query: 665 DEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
+VV EES VE ++ RAL GEE+KNVE+KLR F QKQ +Y++VN
Sbjct: 552 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVN 600
>gi|363547891|gb|AEW26985.1| phytochrome P [Zamia variegata]
Length = 590
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/596 (71%), Positives = 496/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ + S S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMQSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+P DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I V+S G +NGWNAK+AEL GLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVNSGGFVNGWNAKLAELAGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547830|gb|AEW26955.1| phytochrome P [Zamia angustifolia]
Length = 590
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 494/596 (82%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAA ++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAVAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGVAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+ QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVT TE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTLTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ ++ ++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547577|gb|AEW26831.1| phytochrome P [Cycas panzhihuaensis]
Length = 589
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/596 (73%), Positives = 498/596 (83%), Gaps = 10/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TF+II YSEN +EMLDL +S E L +G D RTLFTP S A
Sbjct: 2 IQPLGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEREVLALGTDVRTLFTPSSAAP 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGAV
Sbjct: 62 LGKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGG IGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGGIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+Q
Sbjct: 238 APHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL Y
Sbjct: 296 AFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALCY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENVE 474
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATAP
Sbjct: 475 MDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAP 533
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 534 ILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547882|gb|AEW26981.1| phytochrome P [Zamia purpurea]
Length = 590
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 497/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + ML+L +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLNLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ + S S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMQSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHGQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGK L+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKPLVCDLIYEESMETVERLLHHALRG 590
>gi|363547715|gb|AEW26900.1| phytochrome P [Encephalartos laevifolius]
Length = 590
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/599 (71%), Positives = 498/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A+S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAAMSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEV +E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVAAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQS SIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSLSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLS DSLA+AGYPGAA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSMDSLADAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547740|gb|AEW26912.1| phytochrome P [Encephalartos nubimontanus]
Length = 590
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/599 (71%), Positives = 497/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIAEWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VD G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|218683919|gb|ACL00913.1| phytochrome D [Erysimum capitatum]
Length = 635
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/635 (65%), Positives = 502/635 (79%), Gaps = 15/635 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PA+S+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVV+ V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PAISIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEV++E +R DLEPY+G+H+PA DIPQA RFLFKQNRVRMI DCHA PV V+Q L Q
Sbjct: 61 GEVIAESKRDDLEPYIGLHYPATDIPQAPRFLFKQNRVRMIVDCHASPVRVVQDDRLTQA 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVC 369
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN ++SM+LWGLVVC
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGNAVNTGGRNSMRLWGLVVC 180
Query: 370 HHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFS 429
HHTS R IPFPLRYACEFL+QAF LQL MELQ+A Q+AEK +LR Q LLCDMLLRD+P
Sbjct: 181 HHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAFQVAEKRVLRMQTLLCDMLLRDSPAG 240
Query: 430 IVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLA 489
IVTQSPSIMDLVKC+GAA Y G+ + +GV PTE+Q+ DI WLL NH D TGLSTDSL
Sbjct: 241 IVTQSPSIMDLVKCNGAAFLYRGKYYSLGVAPTEAQISDIVEWLLANHSDSTGLSTDSLG 300
Query: 490 EAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPR 549
+AGYP AA LG VCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +MHPR
Sbjct: 301 DAGYPRAAALGDVVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPR 360
Query: 550 SSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM- 607
SSF+AFL VVK+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M
Sbjct: 361 SSFQAFLVVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAIDSKAAAAGAVQPHGEDMA 420
Query: 608 -QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
QG+ E+ +VA EMVRLIETAT PIF VD G INGWNAK+AELTGL EAMGKSL+ +
Sbjct: 421 NQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVDEAMGKSLVRD 480
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
++++E + V+ L+ AL G+E KNVE+KL+ F + Q V++ VN C+S+DY NN+ G
Sbjct: 481 LIYKEYEETVDRLLSCALKGDEGKNVEVKLKTFGPELQGKAVFVTVNTCSSKDYLNNIVG 540
Query: 727 VCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTG 786
VCFVGQD+T KV+MDKFI +QGDY+AI+ S NPLIPPIFA+DEN C EWN AME +TG
Sbjct: 541 VCFVGQDVTGHKVVMDKFINIQGDYKAIMHSPNPLIPPIFAADENTHCLEWNTAMENLTG 600
Query: 787 WMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
W R EVIGK+L +E+FG+ CR+KG D LTKFMI+L
Sbjct: 601 WPRSEVIGKLLVKEVFGSCCRLKGPDALTKFMIVL 635
>gi|363547713|gb|AEW26899.1| phytochrome P [Encephalartos kisambo]
Length = 590
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/599 (71%), Positives = 497/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
L KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALPLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRVVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547818|gb|AEW26949.1| phytochrome P [Macrozamia spiralis]
Length = 582
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/591 (72%), Positives = 497/591 (84%), Gaps = 13/591 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAA 155
LAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S SL KAA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSALSLEKAA 58
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
A++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AGAVQSQKL
Sbjct: 59 AAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAGAVQSQKL 114
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
AV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEP
Sbjct: 115 AVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEP 174
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
YLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL++PLCLV STLR+PHGC
Sbjct: 175 YLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRAPHGC 234
Query: 336 HLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQ 395
H QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF LQ
Sbjct: 235 HAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQ 292
Query: 396 LYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCW 455
L MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG W
Sbjct: 293 LNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMVW 352
Query: 456 LVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKD 515
++GV P E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARIT+KD
Sbjct: 353 VLGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKD 412
Query: 516 FLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIH 575
FLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIH
Sbjct: 413 FLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIH 472
Query: 576 SLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVD 635
SLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EMVRLIETATAPI VD
Sbjct: 473 SLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETATAPILAVD 531
Query: 636 SSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
S G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 532 SGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 582
>gi|363547814|gb|AEW26947.1| phytochrome P [Macrozamia riedlei]
Length = 582
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/591 (72%), Positives = 496/591 (83%), Gaps = 13/591 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKAA 155
LAVEE TFRII YSEN + MLDL +S E L IG D RTLFTP S SL KAA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQVFLT--IGTDVRTLFTPSSALSLEKAA 58
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
A++EISL+NPI +HS RS KPFYAI+HRIDVG+VID EP GD A+S+AGAVQSQKL
Sbjct: 59 AAQEISLMNPIWMHS--RSSGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAGAVQSQKL 114
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
AV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEP
Sbjct: 115 AVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEP 174
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
YLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHGC
Sbjct: 175 YLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGC 234
Query: 336 HLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQ 395
H QYM NMGSIASLVMAV+IN +MKLWGLVVCHHT PR +PFPLRYACEFL+QAF LQ
Sbjct: 235 HAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTCPRAVPFPLRYACEFLMQAFGLQ 292
Query: 396 LYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCW 455
L MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG W
Sbjct: 293 LNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMVW 352
Query: 456 LVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKD 515
++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARIT+KD
Sbjct: 353 VLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKD 412
Query: 516 FLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIH 575
FLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIH
Sbjct: 413 FLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIH 472
Query: 576 SLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVD 635
SLQ+++R SFQ++ +++++K +++ N K+Q +DELSSVA EM RLIETATAPI VD
Sbjct: 473 SLQLILRGSFQDI-DDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAPILAVD 531
Query: 636 SSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
S G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+C AL G
Sbjct: 532 SGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHALRG 582
>gi|363547856|gb|AEW26968.1| phytochrome P [Zamia lawsoniana]
Length = 590
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/596 (71%), Positives = 496/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ + S S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMQSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+P DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL ME Q+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMESQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I V+S G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547876|gb|AEW26978.1| phytochrome P [Zamia portoricensis]
Length = 590
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/594 (71%), Positives = 492/594 (82%), Gaps = 9/594 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAA ++EISL+NP+ +HS KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAVAQEISLMNPVWMHSKGSG--KPFYAILHRIDVGMVIDFEPV--GGVAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+ QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG A CGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAACGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ ++ ++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHAL 588
>gi|363547605|gb|AEW26845.1| phytochrome P [Cycas simplicipinna]
Length = 589
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/597 (73%), Positives = 497/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ D A+S+AGA
Sbjct: 61 SLEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--ADAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AI RLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAIPRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGATSLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLPYHALRG 589
>gi|363547509|gb|AEW26798.1| phytochrome P [Cycas beddomei]
Length = 589
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/596 (72%), Positives = 499/596 (83%), Gaps = 12/596 (2%)
Query: 94 QPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGAS 150
QPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S AS
Sbjct: 3 QPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAAS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAA ++EISL+NPI + SRS KPFYAI+HR+DVG+VID EP+ GD A+S+AGAV
Sbjct: 62 LEKAAVAQEISLMNPIWM--RSRSSGKPFYAIVHRVDVGMVIDFEPA--GDAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A V VIQ+ EL QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATLVKVIQAAELNQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+Q
Sbjct: 238 AVHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A Q+ EK++LRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQMTEKHMLRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
ITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFK FLEVVK RS PWE E
Sbjct: 416 ITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRRSLPWENVE 474
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATAP
Sbjct: 475 MDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAP 533
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 534 ILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALRG 589
>gi|363547597|gb|AEW26841.1| phytochrome P [Cycas segmentifida]
Length = 589
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/597 (72%), Positives = 499/597 (83%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLA EE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAAEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAA ++E+SL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAVAQEMSLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+ HGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAAHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRTIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWG AKHHP+ KD G +MHPRSSFKAFLEVVK RS WE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGEAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLSWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLHHALRG 589
>gi|363547734|gb|AEW26909.1| phytochrome P [Encephalartos munchii]
Length = 590
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/599 (71%), Positives = 497/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
+QPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 VQPFGCMLAVEERTYRIISYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRS TAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSQTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547679|gb|AEW26882.1| phytochrome P [Encephalartos caffer]
Length = 590
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/599 (71%), Positives = 497/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IGRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM NMGSIASLV AV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMANMGSIASLVTAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N +++ +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVRSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547759|gb|AEW26921.1| phytochrome P [Encephalartos transvenosus]
Length = 590
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/599 (71%), Positives = 496/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLA EE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAAEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAAASVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK L+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRTLKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547689|gb|AEW26887.1| phytochrome P [Encephalartos dolomiticus]
Length = 590
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/599 (71%), Positives = 496/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDI WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIVEWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VD G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547874|gb|AEW26977.1| phytochrome P [Zamia poeppigiana]
Length = 590
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/596 (71%), Positives = 495/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+Q LCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQLLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLL DAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLLDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+A YPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADARYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++ +K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547661|gb|AEW26873.1| phytochrome P [Dioon purpusii]
Length = 590
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/599 (71%), Positives = 498/599 (83%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE TFRII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPAS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EIS +NPI +H S K FYAI+HRIDVG+VID EP+ GD A+S+A
Sbjct: 59 ALSLEKAAAAQEISPMNPIWMHGKSSG--KAFYAIVHRIDVGMVIDFEPA--GDAAMSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEP LG+H+PA DIPQA+RFLF QNRVRMICDC A PV V+Q+ EL++PLCLV S
Sbjct: 175 IRRSDLEPCLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRRPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM NMGSIASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEF
Sbjct: 235 TLRAPHGCHAQYMANMGSIASLVMAVVVNG--NMKLWGLVVCHHTSPRAVPFPVRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL H D TGLSTDSLAEAGYPGAA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
A+IT+KDFLFWFRSHTAKE+KWGGAKHHP+ +D+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ ++ ++K + + N +++G+DELSS+A EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDTETKTMIHARLNDLRVRGMDELSSIASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+EES VE L+C AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLCHALRG 590
>gi|363547752|gb|AEW26918.1| phytochrome P [Encephalartos sclavoi]
Length = 590
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/599 (71%), Positives = 497/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRVVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPS+MDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSVMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
L YGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LCYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|327241182|gb|AEA40435.1| phytochrome A [Aegilops speltoides]
Length = 1130
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/950 (47%), Positives = 617/950 (64%), Gaps = 36/950 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVIS---PPEGVPE---EQITAYLSKIQRGG 91
++ DA L AEFE+S SF+YS+ V + P + E E++ AYL IQRG
Sbjct: 22 VLAQTTLDAQLNAEFEES---SDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHIQRGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSG 148
+IQPFGC+LA++E +F +I +SEN EML S S D IG + R+LFT
Sbjct: 79 MIQPFGCLLALDEKSFNVIAFSENAPEMLTTASHAVPSVDDPPRLDIGTNVRSLFTDQGA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP + S AG
Sbjct: 139 TALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVNPTEFPASAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AIS++QALPGG I LLC+TVV++V +LTGYDRVM Y FH+D+HGEV +EI
Sbjct: 197 ALQSYKLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEI 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICD A + VI+ + L + L S
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSIKVIEDEALPFDISLCGSA 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMK---------------LWGLVVCHHTS 373
LR+ H CHLQYM NM SIASLVMAV++N + LWGLVVCHH S
Sbjct: 317 LRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCHHES 376
Query: 374 PRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVT 432
PRY+PFPLRYACEFL Q F++ + E +V QL EK+ILR Q +L DML ++A P +IV+
Sbjct: 377 PRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVS 436
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
+P+IMDL+KCDGAAL YG + W +G PTE Q++D+A WL H D TGLST+SL +AG
Sbjct: 437 GAPNIMDLIKCDGAALLYGDKVWRLGNAPTEFQIRDLALWLSEVHMDSTGLSTESLHDAG 496
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGA+ LG +VCGMA A+I S D LFWFRSHTA E++WGGAK+ P D+ +MHPR SF
Sbjct: 497 YPGASALGDSVCGMAVAKINSSDILFWFRSHTADEIRWGGAKNDPSDVDDSRRMHPRLSF 556
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK +S W SE++AIHSLQ+++R + + + K + Q K+ G+ E
Sbjct: 557 KAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPT-GKASLDEQIGDLKLDGLAE 615
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
L +V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S
Sbjct: 616 LQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESS 674
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQ 732
V+ ++ AL G+E+K V +++ ++ V ++ NAC SRD ++V GVCFV Q
Sbjct: 675 VSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVGNACASRDLHDDVVGVCFVAQ 734
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
D+T K++MDKF R++GDY AII + NPLIPPIF +DE C EWNAAM K+TGW R EV
Sbjct: 735 DVTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHREEV 794
Query: 793 IGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVAL 849
+ KML E+F + C +K +D +++ + G+ TE PFGFF+R G++ + L
Sbjct: 795 LNKMLLGEVFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTDCLL 854
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
+ +RR + G + G FCF+ I +LQ AL+ Q + ++K +Y+R + NPL+G
Sbjct: 855 SVNRRENEGGLITGVFCFIHIPSHELQQALQVQQASEQTSLKRLKAFSYMRHAINNPLSG 914
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCI-EEGRCV 958
+ + K L+++ ++E Q + + SD C Q+ I+ +D I E+ C+
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMEKSSCL 964
>gi|363547828|gb|AEW26954.1| phytochrome P [Zamia amblyphyllidia]
Length = 590
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/596 (71%), Positives = 494/596 (82%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD GLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDTGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV +TLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGATLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++G+TPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWMLGMTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTA E+KWGGAKHH + KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTANEIKWGGAKHHADDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ ++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-NDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKS + ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSFVCDLIYEESMETVERLLHHALRG 590
>gi|363547627|gb|AEW26856.1| phytochrome P [Bowenia serrulata]
Length = 590
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/596 (71%), Positives = 495/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQPFGC+LAVEE TFRI+ YSEN + MLDL +S L IG D RTLFT S S
Sbjct: 2 IQPFGCVLAVEERTFRIVAYSENAVGMLDLAPQSVPTMERELLAIGTDVRTLFTASSALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EI L+NP+ +HS RS KPFYAI+HRIDVG+VID EP+ GD A+S+AGAV
Sbjct: 62 LEKAAAAQEIGLMNPVWMHS--RSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQ+ MELQ+A QL EK IL+TQ LLCDMLLRDAP IVTQSPS MDLVKCDGAALYY
Sbjct: 296 AFGLQVNMELQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSTMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG+ W++GV P E+Q+KDIA WLL H D TGLSTDSLA+AGYP AA LG AVCGMA AR
Sbjct: 356 GGKAWVLGVAPAEAQIKDIAAWLLECHADWTGLSTDSLADAGYPAAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE +E
Sbjct: 416 ITAKDFLFWFRSHTAKETKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENAE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R F+++ ++++K +++ N ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGPFEDI-NDSETKTIIHSRLNDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLRHALRG 590
>gi|363547840|gb|AEW26960.1| phytochrome P [Zamia furfuracea]
Length = 590
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/596 (71%), Positives = 495/596 (83%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP GCMLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL+NP+ + S S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAAAAQEISLMNPVWMQSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+P DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL ME Q+A QL EK+IL+TQ LLC+MLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMESQLAAQLTEKHILKTQTLLCNMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG A CGMA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAACGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I V+S G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547531|gb|AEW26809.1| phytochrome P [Cycas condaoensis]
Length = 589
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/597 (73%), Positives = 504/597 (84%), Gaps = 12/597 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S A
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAA 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
SL KAAA++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGA
Sbjct: 61 SLEKAAAAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 117 VQSQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+
Sbjct: 237 RAPHGCHSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSARAIPFPVRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 473
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATA
Sbjct: 474 EMDAIHSLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 532
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS G +NGWNAKVAELTGLP EAMG SL+ ++V+EES VE L+ AL G
Sbjct: 533 PILAVDSGGIVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHALKG 589
>gi|327241172|gb|AEA40430.1| phytochrome A type 1 [Triticum aestivum]
Length = 1130
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/950 (47%), Positives = 618/950 (65%), Gaps = 36/950 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVIS---PPEGVPE---EQITAYLSKIQRGG 91
++ DA L A FE+S SF+YS+ V + P + E E++ AYL IQRG
Sbjct: 22 VLAQTTLDAELNAGFEES---SDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHIQRGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSG 148
+IQ FGC+LA++E +F +I +S N EML S S D IG + R+LFT
Sbjct: 79 MIQSFGCLLALDEKSFNVIAFSGNAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTDQGA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
A+L KA ++SLLNPILV + KPFYAI+HR +V+D EP + + AG
Sbjct: 139 AALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVNPTEFPATAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AIS++QALPGG + LLC+TVV++V LTGYDRVM Y FH+D+HGEV +EI
Sbjct: 197 ALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVFAEI 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ LEPYLG+H+PA DIPQAARFLF +N+VR+ICD A P+ VI+ + L + L S
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLCGSA 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMK---------------LWGLVVCHHTS 373
LR+ H CHLQYM NM SIASLVMAV++N + LWGL+VCHH S
Sbjct: 317 LRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCHHES 376
Query: 374 PRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVT 432
PRY+PFPLRYACEFL Q F++ + E +V QL EK+ILR Q +L DML ++A P +IV+
Sbjct: 377 PRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVS 436
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
+P+IMDL+KCDGAAL YGG+ W +G PTESQ++D+A WL H D TGLST+SL +AG
Sbjct: 437 GAPNIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLHDAG 496
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGA+ LG VCGMA A+I S D LFWFRS TAKE++WGGAK+ P D+ +MHPR SF
Sbjct: 497 YPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRLSF 556
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK +S W SE++AIHSLQ+++R + + + K + Q K+ G+ E
Sbjct: 557 KAFLEVVKMKSLAWADSEMDAIHSLQLILRGAVDGVVKPT-GKASLDEQIGDLKLDGLAE 615
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
L +V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S
Sbjct: 616 LQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESS 674
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQ 732
V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV Q
Sbjct: 675 VSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
D+T K++MDKF R++GDY AII + NPLIPPIF +DE+ C EWNAAM K+TGW R EV
Sbjct: 735 DMTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADESGWCCEWNAAMTKLTGWHREEV 794
Query: 793 IGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVAL 849
+ KML E+F + C +K +D +++ + G+ TE PFGFF+R G++ E L
Sbjct: 795 LDKMLLGEVFDSRNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTECLL 854
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
+ +RR + G + G FCF+ I +LQ AL+ Q + ++K +Y+R + NPL+G
Sbjct: 855 SVNRRQNEGGLITGVFCFIHIPSHELQQALQVQQASEQKSLKRLKAFSYMRHAINNPLSG 914
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCI-EEGRCV 958
+ + K L+++ ++E Q + + +D C Q+ I+ +D I E+ C+
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVADNCHHQLNKILADLDQHNIMEKSSCL 964
>gi|363547691|gb|AEW26888.1| phytochrome P [Encephalartos dyerianus]
Length = 590
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/599 (71%), Positives = 497/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A+S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAAMSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGG IGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGVIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGA+H P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAEHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VD G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547746|gb|AEW26915.1| phytochrome P [Encephalartos pterogonus]
Length = 590
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/599 (71%), Positives = 495/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQSAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRS TAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSQTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGL EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLRVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|218683921|gb|ACL00914.1| phytochrome D [Erysimum capitatum]
Length = 635
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/635 (65%), Positives = 501/635 (78%), Gaps = 15/635 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PA+S+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PAISIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEV++E +R DLEPY+G+H+PA DIP A+RFLFKQNRVRMI DCHA PV V+Q L Q
Sbjct: 61 GEVIAESKRDDLEPYIGLHYPATDIPHASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVC 369
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN ++SM+LWGLVVC
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGNAVNTGGRNSMRLWGLVVC 180
Query: 370 HHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFS 429
HHTS R IPFPLRYACEFL+QAF LQL MELQ+A Q+AEK +LR Q LLCDMLLRD+P
Sbjct: 181 HHTSARCIPFPLRYACEFLMQAFGLQLSMELQLAFQVAEKRVLRMQTLLCDMLLRDSPAG 240
Query: 430 IVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLA 489
IVTQSPSIMDLVKC+GAA Y G+ + +GV PTE+Q+ DI WLL NH D TGLSTDSL
Sbjct: 241 IVTQSPSIMDLVKCNGAAFLYKGKYYSLGVVPTEAQISDIVEWLLANHSDSTGLSTDSLG 300
Query: 490 EAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPR 549
+AGYP AA LG AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +MHPR
Sbjct: 301 DAGYPRAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPR 360
Query: 550 SSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM- 607
SSF+AFLEVVK+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M
Sbjct: 361 SSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGEDMA 420
Query: 608 -QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
QG+ E+ +VA EMVRLIETAT PIF VD G INGWNAK+ ELT L EAMGKSL+ +
Sbjct: 421 DQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKITELTSLSVDEAMGKSLVCD 480
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
++++E + V+ L+ AL G+E KNVE+KL+ F + Q V+++VN C+S+DY NN+ G
Sbjct: 481 LIYKEYEVIVDRLLSCALKGDEGKNVEVKLKTFGPELQGKAVFVVVNTCSSKDYLNNIVG 540
Query: 727 VCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTG 786
V FVGQD+T KV+MDKFI +QGDY+AI+ S NPLIPPIFA+DEN C EWN AME +TG
Sbjct: 541 VSFVGQDVTGHKVVMDKFINIQGDYKAIMHSPNPLIPPIFAADENTHCLEWNTAMENLTG 600
Query: 787 WMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
W R EVIGK+L +E+FG+ CR+KG D LTK MI+L
Sbjct: 601 WPRSEVIGKLLVKEVFGSCCRLKGPDALTKLMIVL 635
>gi|77963960|gb|ABB13322.1| phytochrome A [Hordeum vulgare subsp. vulgare]
Length = 1130
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/945 (47%), Positives = 616/945 (65%), Gaps = 35/945 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVIS---PPEGVPE---EQITAYLSKIQRGG 91
++ DA L AEFE+S SF+YS+ V + P + E E++ AYL IQRG
Sbjct: 22 VLAQTTLDAELNAEFEES---SDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHIQRGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSG 148
+IQ FGC+LA++E +F +I +SEN EML S S D IG + R+LFT
Sbjct: 79 MIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTEQGA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP + + AG
Sbjct: 139 TALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVNPTEFPATAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AIS++QALPGG + LLC+TVV++V +LTGYDRVM Y FH+D+HGEV +EI
Sbjct: 197 ALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEI 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICD A + VI+ + L + L S+
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCGSS 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIIN---------------SKDSMKLWGLVVCHHTS 373
LR+ H CHLQYM NM SIASLVMAV++N + LWGLVVCHH S
Sbjct: 317 LRAAHSCHLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHHES 376
Query: 374 PRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVT 432
PRY+PFPLRYACEFL Q F++ + E +V QL EK+ILR Q +L DML ++A P +IV+
Sbjct: 377 PRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVS 436
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
+P+IMDL+KCDGAAL YG + W +G PTESQ++ IA WL H D TGLST+SL +AG
Sbjct: 437 GTPNIMDLIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHDAG 496
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGA+ LG VCG+A A+I S D LFWFRSHTA+E++WGGAK+ P +D+ +MHPR SF
Sbjct: 497 YPGASALGDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRLSF 556
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK +S W E++AIHSLQ+++R + ++ + K + Q K+ G+ E
Sbjct: 557 KAFLEVVKMKSLAWSDYEMDAIHSLQLILRGALDDVAKPT-GKASLDEQIGDLKLDGIAE 615
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
L +V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S
Sbjct: 616 LQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESS 674
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQ 732
V+ ++ AL G+E+K V ++ ++ V ++VNAC SRD ++V GVCFV Q
Sbjct: 675 VPVVQRMLYLALQGKEEKEVRFDMKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
D+T K++MDKF R++GDY AI+ + NPLIPPIF +DE CSEWNAAM K+TGW R EV
Sbjct: 735 DMTVHKLVMDKFTRVKGDYMAIVHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHREEV 794
Query: 793 IGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVAL 849
+ KML E+F + C +K +D +L+ + G+ TE PFGFF+R G++ E L
Sbjct: 795 LDKMLLGEVFDSSNASCLLKNKDAFVGLCVLINSALAGEETEKAPFGFFDRSGKYTECLL 854
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
+ + R + +G + G FCF+ I +LQ AL+ Q + ++K +Y+R + NPL+G
Sbjct: 855 SVNSRANEDGLITGVFCFIHIPSHELQQALQVQQASEQASLRRLKAFSYMRHAINNPLSG 914
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
+ + K L+++ ++E Q + + SD C Q+ I+ +D I E
Sbjct: 915 MLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 959
>gi|218683905|gb|ACL00907.1| phytochrome D [Boechera laevigata]
Length = 630
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/634 (65%), Positives = 500/634 (78%), Gaps = 18/634 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE V+ LTGY RVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRDLTGYHRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEV++E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV V+Q L Q
Sbjct: 61 GEVIAESKRYDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVC 369
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN ++SM+LWGLVVC
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGNCVNTGGRNSMRLWGLVVC 180
Query: 370 HHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFS 429
HH S R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P
Sbjct: 181 HHKSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAG 240
Query: 430 IVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLA 489
IVTQ PSIMDLVKC+GAA Y G+ + +GV PTE+Q+ DI WLL NH D TGLSTDSL
Sbjct: 241 IVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDIVMWLLANHSDSTGLSTDSLG 300
Query: 490 EAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPR 549
+ GYPGAA LG AVCGMA A IT +DFLFW+RSHT KE+KWGGAKHHPE KD+G +MHPR
Sbjct: 301 DVGYPGAAALGDAVCGMAVAYITKRDFLFWYRSHTEKEIKWGGAKHHPEDKDDGQRMHPR 360
Query: 550 SSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM-- 607
SSF+AFLEVVK+R PWE +E++AIHSLQ+++RDSF+E E + G Q +G +
Sbjct: 361 SSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESE----AAAAGAVQTHGEDIAE 416
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+ E+ +VA EMVRLIETA PIF VD G INGWNAK+AELT L AMGKSL+ ++
Sbjct: 417 QGMQEIGAVAREMVRLIETAAVPIFAVDIDGCINGWNAKIAELTCLSVEGAMGKSLVRDL 476
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
+++E + V+ L+ AL G+E KNVE+KL+ F + Q V++++NAC+S+DY NN+ GV
Sbjct: 477 IYKEYEETVDRLLSCALKGDEGKNVEVKLKSFGPELQGKAVFVVINACSSKDYLNNIVGV 536
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CF+GQD+T K++MDKFI +Q DY+A I S NPLIPPIFA+DEN CC EWN AMEK+TGW
Sbjct: 537 CFIGQDVTGYKIVMDKFINIQSDYKATIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGW 596
Query: 788 MRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGK+L RE+FG+ CR+KG D LTKFMI+L
Sbjct: 597 PRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 630
>gi|77963956|gb|ABB13320.1| phytochrome A [Hordeum vulgare subsp. vulgare]
gi|77963958|gb|ABB13321.1| phytochrome A [Hordeum vulgare subsp. vulgare]
Length = 1130
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/938 (47%), Positives = 614/938 (65%), Gaps = 35/938 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSVIS---PPEGVPE---EQITAYLSKIQRGGLIQPFGC 98
DA L AEFE+S SF+YS+ V + P + E E++ AYL IQRG +IQ FGC
Sbjct: 29 DAELNAEFEES---SDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHIQRGKMIQSFGC 85
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAA 155
+LA++E +F +I +SEN EML S S D IG + R+LFT +L KA
Sbjct: 86 LLALDEKSFNLIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTEQGATALHKAL 145
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
++SLLNPILV + KPFYAI+HR +V+D EP + + AGA+QS KL
Sbjct: 146 GFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQSYKL 203
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
A AIS++QALPGG + LLC+TVV++V +LTGYDRVM Y FH+D+HGEV +EI + LEP
Sbjct: 204 AAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKPGLEP 263
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
YLG+H+PA DIPQAARFLF +N+VRMICD A + VI+ + L + L S+LR+ H C
Sbjct: 264 YLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCGSSLRAAHSC 323
Query: 336 HLQYMTNMGSIASLVMAVIIN---------------SKDSMKLWGLVVCHHTSPRYIPFP 380
HLQYM NM SIASLVMAV++N + LWGLVVCHH SPRY+PFP
Sbjct: 324 HLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHHESPRYVPFP 383
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVTQSPSIMD 439
LRYACEFL Q F++ + E +V QL EK+ILR Q +L DML ++A P +IV+ +P+IMD
Sbjct: 384 LRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGTPNIMD 443
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
L+KCDGAAL YG + W +G PTESQ++ IA WL H D TGLST+SL +AGYPGA+ L
Sbjct: 444 LIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHDAGYPGASAL 503
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G VCG+A A+I S D LFWFRSHTA+E++WGGAK+ P +D+ +MHPR SFKAFLEVV
Sbjct: 504 GDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRLSFKAFLEVV 563
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
K +S W E++AIHSLQ+++R + ++ + K + Q K+ G+ EL +V E
Sbjct: 564 KMKSLAWSDYEMDAIHSLQLILRGALDDVAKPT-GKASLDEQIGDLKLDGIAELQAVTSE 622
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S V+ +
Sbjct: 623 MVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESSVPVVQRM 681
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKV 739
+ AL G+E+K V ++ ++ V ++VNAC SRD ++V GVCFV QD+T K+
Sbjct: 682 LYLALQGKEEKEVRFDMKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDMTVHKL 741
Query: 740 LMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPR 799
+MDKF R++GDY AI+ + NPLIPPIF +DE CSEWNAAM K+TGW R EV+ KML
Sbjct: 742 VMDKFTRVKGDYMAIVHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHREEVLDKMLLG 801
Query: 800 EIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTD 856
E+F + C +K +D +L+ + G+ TE PFGFF+R G++ E L+ + R +
Sbjct: 802 EVFDSSNASCLLKNKDAFVGLCVLINSALAGEETEKAPFGFFDRSGKYTECLLSVNSRAN 861
Query: 857 AEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKL 916
+G + G FCF+ I +LQ AL+ Q + ++K +Y+R + NPL+G+ + K
Sbjct: 862 EDGLITGVFCFIHIPSHELQQALQVQQASEQASLRRLKAFSYMRHAINNPLSGMLYSRKA 921
Query: 917 LESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
L+++ ++E Q + + SD C Q+ I+ +D I E
Sbjct: 922 LKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 959
>gi|363547771|gb|AEW26927.1| phytochrome P [Lepidozamia hopei]
Length = 582
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/592 (72%), Positives = 496/592 (83%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE TFRII YSEN + MLDL +S ++F IG D RTLFTP S SL KA
Sbjct: 1 LAVEECTFRIIAYSENAVGMLDLAPQSVPTTEQEFLT---IGTDIRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS RS KPFYA++HRIDVG+VID EP GD A+S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHS--RSSGKPFYAVVHRIDVGMVIDFEPV--GDAAMSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPVGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+P+ DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPSTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMVNMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL MELQ+A QL EK ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMELQLAAQLTEKRILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W++GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARIT+K
Sbjct: 352 WVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q VDELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSVDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|327241176|gb|AEA40432.1| phytochrome A type 1 [Triticum dicoccoides]
Length = 1130
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/947 (47%), Positives = 613/947 (64%), Gaps = 30/947 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPE---EQITAYLSKIQRGGLIQ 94
++ DA L AEFE+S S + P + E E++ AYL IQRG +IQ
Sbjct: 22 VLAQTTLDAELNAEFEESSDSFDDSKLVEAQRDTPTVLQEGRSEKVIAYLQHIQRGKMIQ 81
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASL 151
FGC+LA++E +F +I +SEN EML S S D IG + R+LFT A+L
Sbjct: 82 SFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTDQGAAAL 141
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KA ++SLLNPILV + KPFYAI+HR +V+D EP + + AGA+Q
Sbjct: 142 HKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQ 199
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AIS++QALPGG + LLC+TVV++V LTGYDRVM Y FH+D+HGEV +EI +
Sbjct: 200 SYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVFAEITKP 259
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
LEPYLG+H+PA DIPQAARFLF +N+VR+ICD A P+ VI+ + L + L S LR+
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLCGSALRA 319
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDSMK---------------LWGLVVCHHTSPRY 376
H CHLQYM NM SIASLVMAV++N + LWGL+VCHH SPRY
Sbjct: 320 AHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCHHESPRY 379
Query: 377 IPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVTQSP 435
+PFPLRYACEFL Q F++ + E +V QL EK+ILR Q +L DML ++A P +IV+ +P
Sbjct: 380 VPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGAP 439
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDL+KCDGAAL YGG+ W +G PTESQ++D+A WL H D TGLST+SL +AGYPG
Sbjct: 440 NIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYPG 499
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A+ LG VCGMA A+I S D LFWFRS TAKE++WGGAK+ P D+ +MHPR SFKAF
Sbjct: 500 ASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRLSFKAF 559
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK +S W SE++AIHSLQ+++R + + + K + Q K+ G+ EL +
Sbjct: 560 LEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPT-GKASLDEQIGDLKLDGLAELQA 618
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S
Sbjct: 619 VTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESSVSV 677
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV QD+T
Sbjct: 678 VQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDMT 737
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
K++MDKF R++GDY AII + NPLIPPIF +DE+ C EWNAAM K+TGW R EV+ K
Sbjct: 738 VHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADESGWCCEWNAAMTKLTGWHREEVLDK 797
Query: 796 MLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+F + +K +D +++ + G+ TE PFGFF+R G++ E L+ +
Sbjct: 798 MLLGEVFDSRNASWPLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTECLLSVN 857
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
RR + G + G FCF+ I +LQ AL+ Q + ++K +Y+R + NPL+G+ +
Sbjct: 858 RRQNEGGLITGVFCFIHIPSHELQQALQVQQASEQKSLKRLKAFSYMRHAINNPLSGMLY 917
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCI-EEGRCV 958
K L+++ ++E Q + + +D C Q+ I+ +D I E+ C+
Sbjct: 918 SRKALKNTDLNEEQMRQIHVADNCHHQLNKILADLDQHNIMEKSSCL 964
>gi|363547535|gb|AEW26811.1| phytochrome P [Cycas debaoensis]
Length = 582
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/591 (73%), Positives = 495/591 (83%), Gaps = 12/591 (2%)
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGASLAKAA 155
MLAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S ASL KAA
Sbjct: 1 MLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAASLEKAA 59
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGAVQSQKL
Sbjct: 60 VAQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQSQKL 115
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
AV AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEP
Sbjct: 116 AVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEP 175
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
YLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STLR+ HGC
Sbjct: 176 YLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRAAHGC 235
Query: 336 HLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQ 395
H QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+QAF LQ
Sbjct: 236 HSQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFGLQ 293
Query: 396 LYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCW 455
L MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG W
Sbjct: 294 LNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFW 353
Query: 456 LVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKD 515
L+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKD
Sbjct: 354 LLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKD 413
Query: 516 FLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIH 575
FLFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E++AIH
Sbjct: 414 FLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIH 472
Query: 576 SLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVD 635
SLQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATAPI VD
Sbjct: 473 SLQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAVD 531
Query: 636 SSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
S G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L+ AL G
Sbjct: 532 SGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 582
>gi|363547834|gb|AEW26957.1| phytochrome P [Zamia dressleri]
Length = 590
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/596 (71%), Positives = 493/596 (82%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQP G MLAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S S
Sbjct: 2 IQPLGYMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KA A++EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAV
Sbjct: 62 LEKAGAAQEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRM+CDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMVCDCRATPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSP +PFP RYACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPGAVPFPARYACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYY
Sbjct: 296 AFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W++GVTPTE+Q+KDIA WLL HGD TGLSTDS A+AGYPGAA LG AVC MA AR
Sbjct: 356 GGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSSADAGYPGAASLGDAVCRMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ +++++K +++ ++Q +DELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-DDSETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 590
>gi|363547899|gb|AEW26989.1| phytochrome P [Abies firma]
Length = 590
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/597 (72%), Positives = 495/597 (82%), Gaps = 11/597 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
+QPFGC+LAVEE TFRII YSEN LEMLDL +S E L IG D RTLFT S S
Sbjct: 2 VQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSMEQEVLTIGTDVRTLFTAASANS 61
Query: 151 LAKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
L KAA + EISL+NPI VH NSR KPFYAI+HRIDVG+VID EP GD +S AGA
Sbjct: 62 LEKAAVAHEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDFEPL--GDAFMSAAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQ+LP GDIGLLCDTVVE+V++LTGYDRVM+Y FH+D+HG IR
Sbjct: 117 VQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHEDEHGGSCRGIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RS+LEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS+EL QPLCLV STL
Sbjct: 177 RSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLVMAVIIN ++KLWGLVVCHHTSPR +PFPLRYACEFL+
Sbjct: 237 RAPHGCHAQYMGNMGSIASLVMAVIING--NLKLWGLVVCHHTSPRAVPFPLRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAAL+
Sbjct: 295 QAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALH 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTDSLA+AGYP AA LG AVCGMA+A
Sbjct: 355 YGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPSAASLGDAVCGMASA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PW+
Sbjct: 415 RITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWDNV 474
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
EI+AIHSLQ+++R SFQ++++ +K +++ N ++QG+DELSSVA EMVRLIETATA
Sbjct: 475 EIDAIHSLQLILRGSFQDIDDSG-TKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATA 533
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
PI VDS+G +NGWNAKVAELTGLP EAMG SL+ +++ EES VE ++ AL G
Sbjct: 534 PILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLLFEESVERVEKMLYNALRG 590
>gi|218683935|gb|ACL00921.1| phytochrome D [Malcolmia africana]
Length = 633
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/635 (65%), Positives = 504/635 (79%), Gaps = 17/635 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVV+ V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRGLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEV++E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRM+ DC A PV V+Q L Q
Sbjct: 61 GEVIAESKREDLEPYIGLHYPATDIPQASRFLFKQNRVRMVVDCSASPVRVVQDDRLAQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN-----------SKDSMKLWGLVVCH 370
+CLV STLR+PHGCH QYM NMG+ ASL MAVIIN ++SM+LWGLVVCH
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGTTASLAMAVIINXNEXDGSXGAXGRNSMRLWGLVVCH 180
Query: 371 HTSP-RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFS 429
HTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P
Sbjct: 181 HTSASRCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAG 240
Query: 430 IVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLA 489
IVTQSPSIMDLVKC+GAA Y G+ + +GV P+E+Q+ +I WLL H D TGLSTDSL+
Sbjct: 241 IVTQSPSIMDLVKCNGAAFLYQGKYYSLGVAPSEAQIHEIVEWLLAKHSDSTGLSTDSLS 300
Query: 490 EAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPR 549
+AGYP AA LG AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +MHPR
Sbjct: 301 DAGYPEAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPR 360
Query: 550 SSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM-- 607
SSFKAFLEVVK+R PWE +E++AIHSLQ+++RDSF+E + V Q +G M
Sbjct: 361 SSFKAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKEAAAAAAAGVA--IQPHGEDMTE 418
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+DE+ +VA EMVRLIETAT PIF VD G INGWNAK+AELT L EAMGKSL+ ++
Sbjct: 419 QGMDEVGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTCLSVEEAMGKSLVRDL 478
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQ-HSVVYILVNACTSRDYKNNVKG 726
+++E + V+ L+ AL GEE KNVE+KL+ F Q V+++VNAC+S+DY NN+ G
Sbjct: 479 IYKEYEETVDKLLSNALKGEEGKNVEVKLKTFGAMVQGKEAVFVVVNACSSKDYLNNIIG 538
Query: 727 VCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTG 786
VCFVG+D+T EK +MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TG
Sbjct: 539 VCFVGKDVTSEKFVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTG 598
Query: 787 WMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
W R EVIGK+L +E+FG+ CR+KG D LTKFMI+L
Sbjct: 599 WPRSEVIGKLLVKEVFGSCCRLKGPDALTKFMIVL 633
>gi|218683933|gb|ACL00920.1| phytochrome D [Malcolmia africana]
Length = 630
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/632 (65%), Positives = 505/632 (79%), Gaps = 14/632 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVV+ V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEV++E +R DLEPY+G+H+PA DI QA+RFLFKQNRVRMI DC A PV V+Q L Q
Sbjct: 61 GEVIAESKREDLEPYIGLHYPATDILQASRFLFKQNRVRMIVDCSASPVRVVQDDRLAQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS--------KDSMKLWGLVVCHHTS 373
+CLV STLR+PHGCH QYM NMG++ASL MAVIIN+ ++SM+LWGLVVCHHTS
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGTVASLAMAVIINANEEDGTGGRNSMRLWGLVVCHHTS 180
Query: 374 P-RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVT
Sbjct: 181 ASRCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVT 240
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
QSPSIMDLVKC+GAA Y G+ + +GV P+E+Q+ +I WLL H D TGLSTDSL++AG
Sbjct: 241 QSPSIMDLVKCNGAAFLYQGKYYSLGVAPSEAQIHEIVEWLLAKHSDSTGLSTDSLSDAG 300
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YP AA LG AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +MHPRSSF
Sbjct: 301 YPKAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSSF 360
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM--QGV 610
KAFLEVVK+R PWE +E++AIHSLQ+++RDSF+E + V Q +G M +G+
Sbjct: 361 KAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKEAAAAAAAGVA--IQPHGEDMTEKGM 418
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
DE+ +VA EMVRLIETAT PIF VD G INGWNAK+AELT L EAMGKSL+ +++++
Sbjct: 419 DEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTCLSVEEAMGKSLVRDLIYK 478
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQ-HSVVYILVNACTSRDYKNNVKGVCF 729
E + V+ L+ AL GEE KNVE+KL+ F Q V+++VNAC+S+DY NN+ GVCF
Sbjct: 479 EYEETVDKLLSNALKGEEGKNVEVKLKTFGAMVQGKEAVFVVVNACSSKDYLNNIVGVCF 538
Query: 730 VGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMR 789
VG+D+T EK +MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R
Sbjct: 539 VGKDVTSEKFVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPR 598
Query: 790 HEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
EVIGK+L +E+FG+ CR+KG D LTKFMI+L
Sbjct: 599 SEVIGKLLVKEVFGSCCRLKGPDALTKFMIVL 630
>gi|363547895|gb|AEW26987.1| phytochrome P [Araucaria heterophylla]
Length = 558
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/565 (75%), Positives = 479/565 (84%), Gaps = 11/565 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNG---LIGIDARTLFTPPSGA 149
IQPFGCMLAVEE TF II YSEN +EMLDL +S ++G IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVP-NMDGRVMTIGTDVRTLFTPSSAR 60
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
L KAA + EISL+NPI VHS ++ KPFYAI+HRIDVG+VIDLEP GD ALS AGA
Sbjct: 61 LLEKAAMAHEISLMNPIWVHS--KNTNKPFYAIVHRIDVGMVIDLEPV--GDAALSAAGA 116
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
VQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEV++EIR
Sbjct: 117 VQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVLAEIR 176
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++ELKQPLCLV STL
Sbjct: 177 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAAPVKVIQAEELKQPLCLVGSTL 236
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
R+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFPLRYACEFL+
Sbjct: 237 RAPHGCHAQYMANMGSIASLVMAVVING--NMKLWGLVVCHHTSPRAVPFPLRYACEFLM 294
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLRDAP IVT SPSIMDLVKCDGAALY
Sbjct: 295 QAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALY 354
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YGG CW++GVTPTE+Q+KDIA WLL H D TGLSTDSLA+AGYPGAA LG AVCGMA A
Sbjct: 355 YGGMCWMLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAA 414
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
RITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE
Sbjct: 415 RITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 474
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++++ N +K + + N K+QG+DELS VA EMVRLIETATA
Sbjct: 475 EMDAIHSLQLILRGSFQDIDDSN-TKTMVHARLNDLKLQGIDELSCVASEMVRLIETATA 533
Query: 630 PIFGVDSSGTINGWNAKVAELTGLP 654
PI VDS+G INGWNAKVAELTGLP
Sbjct: 534 PILAVDSNGLINGWNAKVAELTGLP 558
>gi|363547884|gb|AEW26982.1| phytochrome P [Zamia pygmaea]
Length = 582
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/589 (71%), Positives = 490/589 (83%), Gaps = 9/589 (1%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGASLAKAAAS 157
LAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S SL KAA +
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALSLEKAAVA 60
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
+EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAVQSQKLAV
Sbjct: 61 QEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAVQSQKLAV 116
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYL
Sbjct: 117 RAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYL 176
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHGCH
Sbjct: 177 GLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHA 236
Query: 338 QYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLY 397
QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+QAF LQL
Sbjct: 237 QYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFGLQLN 294
Query: 398 MELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLV 457
MELQ+ QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG W++
Sbjct: 295 MELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMVWML 354
Query: 458 GVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFL 517
GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARIT+KDFL
Sbjct: 355 GVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFL 414
Query: 518 FWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSL 577
FWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E++AIHSL
Sbjct: 415 FWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSL 474
Query: 578 QIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSS 637
Q+++R SFQ++ ++ ++K +++ ++Q +DELSSVA EMVRLIETATAPI VDS
Sbjct: 475 QLILRGSFQDI-DDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAVDSG 533
Query: 638 GTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 534 GFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 582
>gi|363547501|gb|AEW26794.1| phytochrome P [Cycas aculeata]
Length = 581
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/590 (73%), Positives = 493/590 (83%), Gaps = 12/590 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGASLAKAAA 156
LAVEE TF+II YSEN +EMLDL +S + E+ L G D RTLFTP S ASL KAA
Sbjct: 1 LAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHEVLAL-GTDVRTLFTPSSAASLEKAAV 59
Query: 157 SREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLA 216
++EISL+NPI + SRS KPFYAI+HRIDVG+VID EP+ GD A+S+AGAVQSQKLA
Sbjct: 60 AQEISLMNPIWM--RSRSSGKPFYAIVHRIDVGMVIDFEPA--GDAAMSVAGAVQSQKLA 115
Query: 217 VSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPY 276
V AISRLQALPGGDIGLLCDTV EDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPY
Sbjct: 116 VRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPY 175
Query: 277 LGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCH 336
LG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STLR+ HGCH
Sbjct: 176 LGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRAAHGCH 235
Query: 337 LQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQL 396
QYM NMGSIASLV+AVIIN+ ++KLWGLVVCHHTS R IPFP+RYACEFL+QAF LQL
Sbjct: 236 SQYMANMGSIASLVLAVIINA--NVKLWGLVVCHHTSVRAIPFPVRYACEFLMQAFGLQL 293
Query: 397 YMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWL 456
MELQ+A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG WL
Sbjct: 294 NMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWL 353
Query: 457 VGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDF 516
+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPG A LG AVCGMA ARITSKDF
Sbjct: 354 LGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGVASLGDAVCGMAAARITSKDF 413
Query: 517 LFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHS 576
LFWFRSHTAKEVKWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E++AIHS
Sbjct: 414 LFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHS 472
Query: 577 LQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDS 636
LQ+++R SFQ++ +++++K + + N ++QG+DELSSVA EMVRLIETATAPI VDS
Sbjct: 473 LQLILRGSFQDI-DDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAPILAVDS 531
Query: 637 SGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
G +NGWNAKVAELTGLP EAMG SL+ +V+EES VE L+ AL G
Sbjct: 532 GGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHALRG 581
>gi|363547846|gb|AEW26963.1| phytochrome P [Zamia integrifolia]
Length = 582
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/589 (71%), Positives = 489/589 (83%), Gaps = 9/589 (1%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGASLAKAAAS 157
LAVEE TFRII YSEN + MLDL +S L IG D RTLFTP S SL KAA +
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMERELLTIGTDVRTLFTPASALSLEKAAVA 60
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
+EISL+NP+ +HS S KPFYAILHRIDVG+VID EP G A+S+AGAVQSQKLAV
Sbjct: 61 QEISLMNPVWMHSKSSG--KPFYAILHRIDVGMVIDFEPV--GGAAMSVAGAVQSQKLAV 116
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
AISRLQALPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYL
Sbjct: 117 RAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYL 176
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STLR+PHGCH
Sbjct: 177 GLHYPATDIPQASRFLFMQNRVRMICDCRAAPVRVIQAAELTQPLCLVGSTLRAPHGCHA 236
Query: 338 QYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLY 397
QYM NMGS+ASLVMAV++N +MKLWGLVVCHHTSPR +PFP+RYACEFL+QAF LQL
Sbjct: 237 QYMANMGSVASLVMAVVMNV--NMKLWGLVVCHHTSPRAVPFPVRYACEFLMQAFGLQLN 294
Query: 398 MELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLV 457
MELQ+ QL EK+IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG W++
Sbjct: 295 MELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMVWML 354
Query: 458 GVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFL 517
GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARIT+KDFL
Sbjct: 355 GVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFL 414
Query: 518 FWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSL 577
FWFRSHTAKE+KWGGAKHHP+ KD G +MHPRSSFKAFLEVVK RS PWE E++AIHSL
Sbjct: 415 FWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSL 474
Query: 578 QIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSS 637
Q+++R SFQ++ ++ ++K +++ ++Q +DELSSVA EMVRLIETATAPI VDS
Sbjct: 475 QLILRGSFQDI-DDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAPILAVDSG 533
Query: 638 GTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
G +NGWNAK+AELTGLP EAMGKSL+ ++++EES VE L+ AL G
Sbjct: 534 GFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHALRG 582
>gi|363547723|gb|AEW26904.1| phytochrome P [Encephalartos lehmannii]
Length = 582
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/592 (71%), Positives = 494/592 (83%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS +S KPFYAI+HRIDVG+VID EP GD A+S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHS--KSFGKPFYAIVHRIDVGMVIDFEPV--GDAAMSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE +E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENAEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547761|gb|AEW26922.1| phytochrome P [Encephalartos trispinosus]
Length = 582
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/592 (71%), Positives = 492/592 (83%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE +E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENAEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547681|gb|AEW26883.1| phytochrome P [Encephalartos cerinus]
Length = 582
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/592 (72%), Positives = 491/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARITSK
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITSK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|327241174|gb|AEA40431.1| phytochrome A [Triticum monococcum]
Length = 1130
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/950 (47%), Positives = 617/950 (64%), Gaps = 36/950 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVIS---PPEGVPE---EQITAYLSKIQRGG 91
++ DA L AEFE+S SF+YS+ V + P + E E++ AYL IQRG
Sbjct: 22 VLAQTTLDAELNAEFEES---SDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHIQRGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSG 148
+IQ FGC+LA++E +F +I +SEN EML S S D IG + R+LFT
Sbjct: 79 MIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTDQGA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP + + AG
Sbjct: 139 TALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVNPTEFPATAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AIS++QALPGG + LLC+TVV++V +LTGYDRVM Y FH+D+HGEV +EI
Sbjct: 197 ALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEI 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICD A + VI+ + L + L S
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSLKVIEDEALPFDISLCGSA 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMK---------------LWGLVVCHHTS 373
LR+ H CHLQYM NM SIASLVMAV++N + LWGL+VCHH S
Sbjct: 317 LRAAHSCHLQYMENMSSIASLVMAVVVNENEEDDEVGSEQPAQQQQKKILWGLIVCHHES 376
Query: 374 PRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVT 432
PRY+PFPLRYACEFL Q F++ + E +V QL EK+ILR Q +L DML ++A P +IV+
Sbjct: 377 PRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVS 436
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
+P+IMDL+KCDGAAL YGG+ W +G PT+SQ+ D+A WL H D TGLST+SL +AG
Sbjct: 437 GAPNIMDLIKCDGAALLYGGKVWRLGTAPTDSQIHDLALWLSEVHMDSTGLSTESLHDAG 496
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGA+ LG VCGMA A+I S D LFWFRS TAKE++WGGAK+ P D+ +MHPR SF
Sbjct: 497 YPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRLSF 556
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK +S W SE++AIHSLQ+++R + + + K + Q K+ G+ E
Sbjct: 557 KAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPT-GKASLDEQIGDLKLDGLAE 615
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
L +V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S
Sbjct: 616 LQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESS 674
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQ 732
V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV Q
Sbjct: 675 VSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQ 734
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
D+T K++MDKF R++GDY AII + NPLIPPIF +DE C EWNAAM K+TGW R EV
Sbjct: 735 DMTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHREEV 794
Query: 793 IGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVAL 849
+ KML E+F + +K +D + +++ + G+ TE PFGFF+R G++ E L
Sbjct: 795 LDKMLLGEVFDSRNASWLLKNKDAFGRLCVVITSALAGEETEKLPFGFFDRSGKYNECLL 854
Query: 850 TASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNG 909
+ +RR + G + G FCF+ I +LQ AL+ Q + ++K +Y+R + NPL+G
Sbjct: 855 SVNRRQNEGGLITGVFCFIHIPSHELQQALQVQQALEQKSLKRLKAFSYMRHAINNPLSG 914
Query: 910 IRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLR-CIEEGRCV 958
+ + K L+++ ++E Q + + +D C Q+ I+ +D +E+ C+
Sbjct: 915 MLYSRKALKNTHLNEEQMRQIHVADNCHHQLNKILADLDQHNTMEKSSCL 964
>gi|218683907|gb|ACL00908.1| phytochrome D [Boechera laevigata]
Length = 630
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/634 (64%), Positives = 498/634 (78%), Gaps = 18/634 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE + LTGY RVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESXRDLTGYHRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEV++E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV V+Q L Q
Sbjct: 61 GEVIAESKRYDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVC 369
+CLV STLR+PHGCH QYM NMGSIASL MAVIIN ++SM+LWGLVVC
Sbjct: 121 ICLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEDGNCVNTGGRNSMRLWGLVVC 180
Query: 370 HHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFS 429
HH S R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P
Sbjct: 181 HHKSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAG 240
Query: 430 IVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLA 489
IVTQ PSIMDLVKC+GAA Y G+ + +GV PTE+Q+ DI WLL NH D TGLST SL
Sbjct: 241 IVTQRPSIMDLVKCNGAAFLYQGKYYPLGVAPTEAQINDIVMWLLANHSDSTGLSTGSLG 300
Query: 490 EAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPR 549
+ GYPGAA LG AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +MHPR
Sbjct: 301 DVGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPR 360
Query: 550 SSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM-- 607
SSF+AFLEVVK+R PWE +E++AI SLQ+++RDSF+E E + G Q +G +
Sbjct: 361 SSFQAFLEVVKSRCQPWETAEMDAILSLQLILRDSFKESE----AAAAGAVQTHGEDIAE 416
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QG+ E+ +VA EMVRLIETA PIF VD G INGWNAK+AELT L EAMGKSL+ ++
Sbjct: 417 QGMQEIGAVAREMVRLIETAAVPIFAVDIDGCINGWNAKIAELTCLSVEEAMGKSLVRDL 476
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
+++E + V+ L+ AL G+E KNVE+KL+ F + Q V +++NAC+S+DY NN+ GV
Sbjct: 477 IYKEYEETVDRLLSCALKGDEGKNVEVKLKSFGPELQGKAVLVVINACSSKDYLNNIVGV 536
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CF+GQD+T K++MDKFI +Q DY+AII S NPLIPPIFA+DEN CC EWN A+EK+TGW
Sbjct: 537 CFIGQDVTGHKIVMDKFINVQSDYKAIIHSPNPLIPPIFAADENTCCLEWNTAIEKLTGW 596
Query: 788 MRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILL 821
R EVIGK+L RE+FG+ CR+KG D LTKFMI+L
Sbjct: 597 PRSEVIGKLLVREVFGSCCRLKGPDALTKFMIVL 630
>gi|363547748|gb|AEW26916.1| phytochrome P [Encephalartos schaijesii]
gi|363547750|gb|AEW26917.1| phytochrome P [Encephalartos schmitzii]
Length = 590
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/599 (71%), Positives = 497/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+ +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547669|gb|AEW26877.1| phytochrome P [Encephalartos altensteinii]
gi|363547736|gb|AEW26910.1| phytochrome P [Encephalartos natalensis]
Length = 582
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/592 (71%), Positives = 492/592 (83%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547667|gb|AEW26876.1| phytochrome P [Encephalartos aemulans]
Length = 582
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/592 (71%), Positives = 491/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547673|gb|AEW26879.1| phytochrome P [Encephalartos arenarius]
Length = 582
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/592 (71%), Positives = 491/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
L VEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LVVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE +E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENAEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547763|gb|AEW26923.1| phytochrome P [Encephalartos turneri]
Length = 582
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/592 (71%), Positives = 491/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESTETVERLLHHALRG 582
>gi|363547699|gb|AEW26892.1| phytochrome P [Encephalartos ghellinckii]
Length = 582
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/592 (71%), Positives = 492/592 (83%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFT S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTASSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A+S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAAMSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHH SPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHASPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGIV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547721|gb|AEW26903.1| phytochrome P [Encephalartos lebomboensis]
Length = 582
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/592 (71%), Positives = 490/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ +V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCGLVYEESMETVERLLHHALRG 582
>gi|363547725|gb|AEW26905.1| phytochrome P [Encephalartos longifolius]
Length = 582
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/592 (71%), Positives = 490/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLEYHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPR SFKAFLEVVK R PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRPSFKAFLEVVKRRCLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547675|gb|AEW26880.1| phytochrome P [Encephalartos barteri]
gi|363547727|gb|AEW26906.1| phytochrome P [Encephalartos macrostrobilus]
Length = 590
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/599 (71%), Positives = 496/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+ +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547695|gb|AEW26890.1| phytochrome P [Encephalartos ferox]
Length = 582
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/592 (71%), Positives = 490/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLPHHALRG 582
>gi|363547765|gb|AEW26924.1| phytochrome P [Encephalartos villosus]
Length = 582
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/592 (71%), Positives = 491/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQ+
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQR 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNR RMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRARMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVAGEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547693|gb|AEW26889.1| phytochrome P [Encephalartos eugene-maraisii]
Length = 582
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/592 (71%), Positives = 490/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIAEWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
D G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547767|gb|AEW26925.1| phytochrome P [Encephalartos whitelockii]
Length = 582
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/592 (71%), Positives = 490/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--DTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A +L EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAARLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547683|gb|AEW26884.1| phytochrome P [Encephalartos concinnus]
Length = 582
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/592 (71%), Positives = 490/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRS TAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSQTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547705|gb|AEW26895.1| phytochrome P [Encephalartos horridus]
Length = 582
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/592 (71%), Positives = 489/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA+REISL+NPI +HS S KPFYAI+HRIDVG+VID E GD A S+AGAVQSQK
Sbjct: 58 AAAREISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFE--SVGDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEGVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM NMGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMANMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W + VTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALEVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE +E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENAEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547756|gb|AEW26920.1| phytochrome P [Encephalartos septentrionalis]
Length = 590
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/599 (71%), Positives = 496/599 (82%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+A
Sbjct: 59 ALSLEKAAAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRV++Y FH+D+HGEVV+E
Sbjct: 115 GAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVVVYRFHEDEHGEVVAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
IRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV S
Sbjct: 175 IRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEF
Sbjct: 235 TLRAPHGCHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVT+SPSIMDLVKCDGAA
Sbjct: 293 LMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTESPSIMDLVKCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYYGG W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA
Sbjct: 353 LYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRSHTAKE+KWGGAKH P+ KD+ +MHPRSSFKAFLEVVK RS PWE
Sbjct: 413 AARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRSLPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AIHSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETA
Sbjct: 473 NVEMDAIHSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+EES VE L+ AL G
Sbjct: 532 TAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLHHALRG 590
>gi|363547701|gb|AEW26893.1| phytochrome P [Encephalartos gratus]
Length = 582
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/592 (71%), Positives = 491/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHHT PR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTPPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ + +++ +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLSDLRVRSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES AVE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMEAVERLLHHALRG 582
>gi|363547703|gb|AEW26894.1| phytochrome P [Encephalartos hildebrandtii]
Length = 582
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/592 (71%), Positives = 489/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVR ICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRTICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+ Q LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKIQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547719|gb|AEW26902.1| phytochrome P [Encephalartos laurentianus]
Length = 582
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/592 (71%), Positives = 488/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL NPI +HS S KPFYAI+H IDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLTNPIWMHSKSSG--KPFYAIVHGIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+ Q LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKIQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIAGWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|406685537|gb|AFS51209.1| phytochrome P, partial [Parasitaxus usta]
Length = 587
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/589 (70%), Positives = 480/589 (81%), Gaps = 22/589 (3%)
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D R LF+P S +L KA +RE +NPI VHS KPFYAI+HRIDVG+VIDL
Sbjct: 11 IGTDVRRLFSPASARALEKAGMARE---MNPIWVHSQFTG--KPFYAIVHRIDVGMVIDL 65
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP ++G AVQSQKLAV AISRLQ+LP GDIGLLCDTVVEDV++LTGYDRVM+Y
Sbjct: 66 EPVRTG------MSAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 119
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FH+D+HGEVV+EIRR DLEPY G+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ
Sbjct: 120 KFHEDEHGEVVAEIRRVDLEPYQGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVIQ 179
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------SMKLW 364
S+EL+QPLCLV STLR+PHGCH QYM NMGSIASLVMAV+IN D SMKLW
Sbjct: 180 SQELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLW 239
Query: 365 GLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLR 424
GLVVCHHTSPR +PFPLRYACEFL+QAF LQL MELQ+A QL EK+ILRTQ LLCDMLLR
Sbjct: 240 GLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 299
Query: 425 DAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLS 484
DAP IV+QSPSIMDLVKCDGAALYYGG W +GVTPTE Q+KDIA WLL HGD TGLS
Sbjct: 300 DAPIGIVSQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEGQIKDIADWLLEYHGDSTGLS 359
Query: 485 TDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGG 544
TDSLA+AGYPG A LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G
Sbjct: 360 TDSLADAGYPGVASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 419
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNG 604
+MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++++ N +K + + N
Sbjct: 420 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSN-TKTMVHARLND 478
Query: 605 SKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLI 664
K+QG DELSSVA EMVRLIETATAPI VDS+G +NGWNAKVAELTGLP EAMGKSL+
Sbjct: 479 LKLQGFDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 538
Query: 665 DEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
++V EES +V+ ++ RAL GEE+KNVE+KLR F +KQ ++++VN
Sbjct: 539 HDLVFEESAESVDKMLYRALRGEEEKNVEIKLRTFGPEKQTEAIFLVVN 587
>gi|363547742|gb|AEW26913.1| phytochrome P [Encephalartos paucidentatus]
Length = 582
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/592 (71%), Positives = 489/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
L VEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LGVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSAVSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELGQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+G +MHPRSSFKAFLEVVK RS P E +E++AI
Sbjct: 412 DFLFWFRSHTAKEMKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPRENAEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|10639836|emb|CAC11136.1| phytochrome N [Pinus sylvestris]
Length = 876
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/712 (58%), Positives = 525/712 (73%), Gaps = 19/712 (2%)
Query: 259 DDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKEL 318
DDHGEV+SE+RR DLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC+A PV VIQ + L
Sbjct: 1 DDHGEVISEMRRYDLEPYLGLHYPATDIPQASRFLFMRNRVRMICDCYAQPVAVIQDERL 60
Query: 319 KQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD------------SMKLWGL 366
+ L STLR+PHGCH QYM NMGSIASLVMAV+IN K+ +LWGL
Sbjct: 61 PRDLSFCGSTLRAPHGCHAQYMANMGSIASLVMAVVINEKELDGDSEGQMQQKGRRLWGL 120
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPRY+PFPLRYACEFL+Q F +QL E+++A Q+ EK ILRTQ LLCDMLLRD
Sbjct: 121 VVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKEVELAAQIREKQILRTQTLLCDMLLRDT 180
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IVTQ P+IMDLV+CDGAALYY WL+GVTPTE+Q++DI WL +H D TGLSTD
Sbjct: 181 PLGIVTQKPNIMDLVRCDGAALYYERNFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTD 240
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SL AGYPGA LG AVCG+A RI SKDFLFWFRSHTAKE+KWGGAKH + +D+G KM
Sbjct: 241 SLVYAGYPGAESLGNAVCGIAAVRINSKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKM 300
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSF AFLEVVK RS WE E++AIHSLQ+++R S +E + + + N Q N K
Sbjct: 301 HPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQLILRGSRKET-DGSGRNISINRQLNDLK 359
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+Q +DEL++V EMVRLIETATAPI VD+ G +NGWN K AELTGL E +G+ LI+
Sbjct: 360 LQEMDELNAVTNEMVRLIETATAPILAVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN- 418
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V E S V+ ++ AL G E++NV+++L++ ++ V +LVNAC+SRD K NV G
Sbjct: 419 LVEETSAENVKRMLHLALQGVEEQNVQIELKRHGSEEDKGPVVLLVNACSSRDLKENVVG 478
Query: 727 VCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTG 786
VCFV QD+T +K++MDKF R+QGDY AI+Q+ +PLIPPIF +DE C E N+AMEK++G
Sbjct: 479 VCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSPLIPPIFGTDECGCVPE-NSAMEKLSG 537
Query: 787 WMRHEVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQ 843
W R E+I KML E+FG CR+KGQ+ LT+ I+L +TGQ TE FPFGFF+R G+
Sbjct: 538 WKREEIIDKMLLGEVFGTRTACCRLKGQNALTQLRIILNSSMTGQETEKFPFGFFDRHGK 597
Query: 844 FVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEV 903
+VE L+A+++ D EGK+ G FCF+ I P+LQ AL Q + + +++ L Y+R E+
Sbjct: 598 YVETLLSANKKLDEEGKITGVFCFLHIASPELQQALYVQHMLEQAAMKRLQALTYLRLEI 657
Query: 904 KNPLNGIRFVHKLLESSS-ISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
KNPL GI F K++E + + E+QRQ +ETS C++QI+ I+D MDL IE+
Sbjct: 658 KNPLYGIMFTQKMMERTDFLREDQRQLVETSALCQKQILKILDDMDLESIED 709
>gi|363547824|gb|AEW26952.1| phytochrome P [Stangeria eriopus]
Length = 590
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/596 (71%), Positives = 493/596 (82%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN MLDL +S L +G D RTLFTP S AS
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAPAMLDLAPQSVPTMEQELLAVGADVRTLFTPSSAAS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL NPIL++S RS KPFYAILHRIDVG+VID EP GD A S+AGAV
Sbjct: 62 LEKAAAAQEISLTNPILMYS--RSSGKPFYAILHRIDVGMVIDFEPV--GDAATSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQ+LPGGD+GLLCD VVE+V+++ GYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 118 QSQKLAVRAISRLQSLPGGDLGLLCDAVVEEVREMAGYDRVMVYRFHEDEHGEVVAEIRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAKPVRVIQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV+IN +MKLWGLVVCHHTSPR +PFP+R ACEFL+Q
Sbjct: 238 APHGCHAQYMVNMGSIASLVMAVVINV--NMKLWGLVVCHHTSPRAVPFPVRCACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQ+ MELQ+A QL EK+IL+TQ LLCDMLLRDAP IVTQ+PS+MDLVKCDGAALYY
Sbjct: 296 AFGLQVNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQTPSVMDLVKCDGAALYY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W +GVTP E Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGMVWALGVTPAEPQIKDIADWLLACHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT DFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E
Sbjct: 416 ITENDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SFQ++ + ++K +++ N ++Q +DELS VA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFQDI-GDTETKTMIHSRLNDLRLQSMDELSCVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+EES AVE L+C AL G
Sbjct: 535 ILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMEAVERLLCNALRG 590
>gi|363547629|gb|AEW26857.1| phytochrome P [Ceratozamia decumbens]
Length = 590
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/596 (69%), Positives = 492/596 (82%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN MLDL +S E L IG D RTLFTP S S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKEFLTIGTDVRTLFTPSSAMS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL NPI + S RS K FYAI+HRIDVG+VID EP GD ALS+AGAV
Sbjct: 62 LEKAAAAQEISLANPISMQS--RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALP GDIG+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E+RR
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC + PV V+Q+ EL+QPLCLV+STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVSSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV++N+ + KLWGLVVCHHTSPR +PFP+R ACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNA--NTKLWGLVVCHHTSPRTVPFPVRCACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A Q EK IL+TQ LLCDMLLRDAP IVTQ+PSIMDLV+CDGAAL Y
Sbjct: 296 AFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W +GV P E+Q+KDIA WLL HGD TG STDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGTVWALGVAPAEAQIKDIADWLLECHGDWTGPSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRS TAKE+KWGGAKHHP+ +D+G +MHPRSSFKAFLEVVK RSFPWE +E
Sbjct: 416 ITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENAE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SF+++ ++ ++K +++ N ++Q ++ELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFEDI-DDTETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+E+S VE L+ AL G
Sbjct: 535 ILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNALRG 590
>gi|363547643|gb|AEW26864.1| phytochrome P [Ceratozamia mirandae]
Length = 590
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/596 (69%), Positives = 491/596 (82%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN MLDL +S E L IG D RTLFTP S S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKEFLTIGTDVRTLFTPSSAMS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL NPI + S RS K FYAI+HRIDVG+VID EP GD ALS+AGAV
Sbjct: 62 LEKAAAAQEISLANPISMQS--RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALP GDIG+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E+RR
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC + PV V+Q+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV++N+ + KLWGLVVCHH SPR +PFP+R ACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNA--NTKLWGLVVCHHASPRAVPFPVRCACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A Q EK IL+TQ LLCDMLLRDAP IVTQ+PSIMDLV+CDGAAL Y
Sbjct: 296 AFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W +GV P E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRS TAKE+KWGGAKHHP+ +D+G +MHPRSSFKAFLEVVK RSFPWE +E
Sbjct: 416 ITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENAE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SF+++++ ++K +++ N ++Q ++ELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFEDIDDA-ETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+E+S VE L+ AL G
Sbjct: 535 ILAVDSCGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNALRG 590
>gi|363547647|gb|AEW26866.1| phytochrome P [Ceratozamia morettii]
Length = 590
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/596 (69%), Positives = 491/596 (82%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN MLDL +S E L IG D RTLFTP S S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKEFLTIGTDVRTLFTPSSAMS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL NPI + S RS K FYAI+HRIDVG+VID EP GD ALS+AGAV
Sbjct: 62 LEKAAAAQEISLANPISMQS--RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALP GDIG+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E+RR
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC + PV V+Q+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV++N+ + KLWGLVVCHHTSPR +PFP+R ACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNA--NTKLWGLVVCHHTSPRTVPFPVRCACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A Q EK IL+TQ LLCDMLLRDAP IVTQ+PSIMDLV+CDGAAL Y
Sbjct: 296 AFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W +GV P E+Q++DIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGTVWALGVAPAEAQIRDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRS TAKE+KWGG KHHP+ +D+G +MHPRSSFKAFLEVVK RSFPWE +E
Sbjct: 416 ITAKDFLFWFRSQTAKEIKWGGEKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENAE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SF+++ ++ ++K +++ N ++Q ++ELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFEDI-DDTETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+E+S VE L+ AL G
Sbjct: 535 ILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNALRG 590
>gi|363547653|gb|AEW26869.1| phytochrome P [Ceratozamia zaragozae]
Length = 590
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/596 (69%), Positives = 490/596 (82%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN MLDL +S E L IG D RTLFTP S S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKEFLTIGTDVRTLFTPSSAMS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL NPI + S RS K FYAI+HRIDVG+VID EP GD ALS+AGAV
Sbjct: 62 LEKAAAAQEISLANPISMQS--RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALP GDIG+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E+RR
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC + PV V+Q+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV++N+ + KLWGLVVCHHTSPR +PFP+R ACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNA--NTKLWGLVVCHHTSPRTVPFPVRCACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A Q EK IL+TQ LLCDMLLRDAP IVTQ+PSIMDLV+CDGAAL Y
Sbjct: 296 AFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W +GV P E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRS TAKE+KWGGAKHHP+ +D+G +MHPRSSFKAFLEVVK RSFPWE +E
Sbjct: 416 ITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENAE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SF+++ ++ ++K +++ N ++ ++ELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFEDI-DDTETKTMVHSRLNDLRVHSMEELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+E+S VE L+ A G
Sbjct: 535 ILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNASRG 590
>gi|363547677|gb|AEW26881.1| phytochrome P [Encephalartos bubalinus]
Length = 582
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/592 (71%), Positives = 490/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S SL KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALSLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACEFL+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+ +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|363547645|gb|AEW26865.1| phytochrome P [Ceratozamia mixeorum]
Length = 590
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/599 (69%), Positives = 490/599 (81%), Gaps = 15/599 (2%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPS 147
IQPFGCMLAVEE TFRII YSEN MLDL +S E+F +G D RTLFTP S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEEEFLT---VGTDVRTLFTPSS 58
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
SL KAAA++EISL NPI + S RS K FYAI+HRIDVG+VID EP GD ALS+A
Sbjct: 59 ATSLEKAAAAQEISLANPISMQS--RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVA 114
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GAVQSQKLAV AISRLQALP GDIG+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E
Sbjct: 115 GAVQSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAE 174
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
+RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC + PV V+Q+ ELKQPLCLV S
Sbjct: 175 MRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELKQPLCLVGS 234
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEF 387
TLR+PHGCH QYM NMGSIASLVMAV++N+ + KLWGLVVCHHTSPR +PFP+R ACEF
Sbjct: 235 TLRAPHGCHAQYMANMGSIASLVMAVVVNA--NTKLWGLVVCHHTSPRAVPFPVRCACEF 292
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L+QAF LQL MELQ+A Q EK IL+TQ LLCDMLLRDAP IVTQ+PSIMDLV+CDGAA
Sbjct: 293 LMQAFGLQLNMELQLATQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAA 352
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
L YGG W +GV P E+Q+K IA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA
Sbjct: 353 LCYGGTVWALGVAPAEAQIKGIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMA 412
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
ARIT+KDFLFWFRS TAKE+KWGGAKHHP+ +D+G +MHPRSSFKAFLEVVK RSFPWE
Sbjct: 413 AARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWE 472
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
+E++AIHSLQ+++ SF ++ ++ ++K +++ N ++Q ++ELSSVA EMVRLIETA
Sbjct: 473 NAEMDAIHSLQLILHGSFGDI-DDTETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETA 531
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
TAPI VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+E+S VE L+ AL G
Sbjct: 532 TAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNALRG 590
>gi|363547633|gb|AEW26859.1| phytochrome P [Ceratozamia huastecorum]
Length = 590
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/596 (69%), Positives = 490/596 (82%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR-SEDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN MLDL + E L IG D RTLFTP S S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQLVPTMEKEFLTIGTDVRTLFTPSSAMS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL NPI + S RS K FYAI+HRIDVG+VID EP GD ALS+AGAV
Sbjct: 62 LEKAAAAQEISLANPISIQS--RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALP GDIG+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E+RR
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC + PV V+Q+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV++N+ + KLWGLVVCHHTSPR +PFP+R ACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNA--NTKLWGLVVCHHTSPRTVPFPVRCACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MEL++A Q EK IL+TQ LLCDMLLRDAP IVTQ+PSIMDLV+CDGAAL Y
Sbjct: 296 AFGLQLNMELRLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W +GV P E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRS TAKE+KWGGAKHHP+ +D+ +MHPRSSFKAFLEVVK RSFPWE +E
Sbjct: 416 ITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDARRMHPRSSFKAFLEVVKRRSFPWENAE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SF+++ ++ ++K +++ N ++Q ++ELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFEDI-DDTETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+E+S VE L+ AL G
Sbjct: 535 ILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNALRG 590
>gi|363547651|gb|AEW26868.1| phytochrome P [Ceratozamia whitelockiana]
Length = 590
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/596 (69%), Positives = 490/596 (82%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN MLDL +S E L IG D RTL TP S S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENATGMLDLAPQSVPTMEKEFLTIGTDVRTLLTPSSAMS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL NPI + S RS K FYAI+HRIDVG+VID EP GD ALS+AGAV
Sbjct: 62 LEKAAAAQEISLANPISMQS--RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALP GDIG+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E+RR
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC + PV V+Q+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV++N+ + KLWGLVVCHHTSPR +PFP+R ACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNA--NTKLWGLVVCHHTSPRAVPFPVRCACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A Q EK IL+TQ LLCDMLLRDAP IVTQ+PSIMDLV+CDGAAL Y
Sbjct: 296 AFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W +GV E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGTVWALGVALAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRS TAKE+KWGGAKHHP+ +D+G +MHPRSSFKAFLEVVK RSFPWE +E
Sbjct: 416 ITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENAE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SF+++++ ++K +++ N ++Q ++ELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFEDIDDA-ETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+E+S VE L+ AL G
Sbjct: 535 ILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNALRG 590
>gi|218683943|gb|ACL00925.1| phytochrome D [Thlaspi perfoliatum]
Length = 616
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/619 (64%), Positives = 491/619 (79%), Gaps = 16/619 (2%)
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
AV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+ FH+D+HGEV++E +R DLEP
Sbjct: 1 AVRAISHLQSLPRGDIKLLCDTVVESVRDLTGYDRVMVDKFHEDEHGEVIAESKRDDLEP 60
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
Y+G+H+PA DIPQA+RFLFKQ+RVRMI DCHA PV V+Q L Q +CLV STLR+PHGC
Sbjct: 61 YIGLHYPATDIPQASRFLFKQSRVRMIVDCHASPVRVVQEDRLTQSICLVGSTLRAPHGC 120
Query: 336 HLQYMTNMGSIASLVMAVIINSKD-------------SMKLWGLVVCHHTSPRYIPFPLR 382
H QYM NMGSIASL MAVIIN + SM+LWGLVVCHHTS R IPFPLR
Sbjct: 121 HAQYMANMGSIASLGMAVIINGNEEDGNGVNNGGGRNSMRLWGLVVCHHTSARCIPFPLR 180
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL+QAF LQL MELQ+A+Q+AEK +LR Q LLCDMLLRD+P IVTQSPSIMDLVK
Sbjct: 181 YACEFLMQAFGLQLNMELQLALQVAEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLVK 240
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
C+G A Y G+ + +GV P+E+Q+ DI WLL NH D TGL TDSL +AGYP A++LG
Sbjct: 241 CNGEAFLYQGKYYSLGVAPSEAQINDIVEWLLANHSDSTGLRTDSLGDAGYPRASVLGDD 300
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+R
Sbjct: 301 VCGMAVAYITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSR 360
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVR 622
S PWE +E++A HSLQ+++RDSF+E E DS V ++ QG++E+ +VA EMVR
Sbjct: 361 SQPWEAAEMDATHSLQLILRDSFKE-SEARDSIVAA--ERENMTEQGMEEIGAVAREMVR 417
Query: 623 LIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICR 682
LIETA PIF VD G INGWNAK+AE+TGL EAMGKS++ ++++ E + AV+ L+ R
Sbjct: 418 LIETAKVPIFAVDMDGCINGWNAKIAEMTGLSVEEAMGKSVVRDLIYRECEEAVDMLLSR 477
Query: 683 ALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMD 742
AL G+E KNVE+KL+ F + Q V+++VNAC+S+D+ +N+ GVCFVGQD+T +K++MD
Sbjct: 478 ALKGDEGKNVEVKLKTFGPELQGKAVFVVVNACSSKDHLSNIVGVCFVGQDVTSQKIVMD 537
Query: 743 KFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIF 802
KFI +QGDY+AII + NPLIPPIFA+DEN CC+EWN AMEK+TGW R +VIGK+L +E+F
Sbjct: 538 KFINIQGDYKAIIHTPNPLIPPIFAADENTCCTEWNTAMEKLTGWSRGQVIGKLLVKEVF 597
Query: 803 GNFCRMKGQDMLTKFMILL 821
G+ CR++G D LTKFMI+L
Sbjct: 598 GSCCRLRGPDELTKFMIVL 616
>gi|363547637|gb|AEW26861.1| phytochrome P [Ceratozamia mexicana]
Length = 590
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/596 (69%), Positives = 488/596 (81%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN MLDL +S E L IG D RTLFTP S S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKEFLTIGTDVRTLFTPSSAMS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL NPI + S RS K FYAI+HRIDVG+VID EP GD ALS+AGAV
Sbjct: 62 LEKAAAAQEISLANPISMQS--RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALP GDIG+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E+RR
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC + PV V+Q+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV++N+ + KLWGLVVCHHTSPR +PFP+R ACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNA--NTKLWGLVVCHHTSPRTVPFPVRCACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A Q EK IL+T LLCDMLLRDAP IVTQ+PSIMDLV+CDGAAL Y
Sbjct: 296 AFGLQLNMELQLAAQATEKRILKTLTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W +GV P E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRS TAKE+KWGG KHHP+ +D+ +MHPRSSFKAFLEVVK RSFPWE +E
Sbjct: 416 ITAKDFLFWFRSQTAKEIKWGGEKHHPDDRDDARRMHPRSSFKAFLEVVKRRSFPWENAE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SF+++ ++ ++K +++ N ++Q ++ELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFEDI-DDTETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+E+S VE L+ A G
Sbjct: 535 ILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNASRG 590
>gi|363547635|gb|AEW26860.1| phytochrome P [Ceratozamia latifolia]
Length = 590
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/596 (69%), Positives = 488/596 (81%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN MLDL +S E L IG D RTLFTP S S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKEFLTIGTDVRTLFTPSSAMS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL NPI + S RS K FYAI+HRIDVG+VID EP GD ALS+AGAV
Sbjct: 62 LEKAAAAQEISLTNPISMQS--RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALP GDIG+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E+RR
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC + PV V+Q+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFIQNRVRMICDCCSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV++N+ + KLWGLVVCHHTSPR +PFP+R ACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNA--NTKLWGLVVCHHTSPRTVPFPVRCACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A Q EK IL+TQ LLCDMLLRDAP IVTQ+PSIMDLV+CDGAAL Y
Sbjct: 296 AFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W +GV P E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRS TAKE+KWGGAKHHP+ +D+ +MHPRSSFKAFLEVVK RSFPWE +E
Sbjct: 416 ITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDARRMHPRSSFKAFLEVVKRRSFPWENAE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R F+++ ++ ++K +++ N ++ ++ELSSVA EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGCFEDI-DDTETKTMVHSRLNDLRVHSMEELSSVASEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EA GKSL+ ++V+E+S VE L+ A G
Sbjct: 535 ILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNASRG 590
>gi|218683899|gb|ACL00904.1| phytochrome D [Arabidopsis halleri]
Length = 608
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/608 (65%), Positives = 484/608 (79%), Gaps = 15/608 (2%)
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
PALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVV+ V+ LTGYDRVM+Y FH+D+H
Sbjct: 1 PALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRDLTGYDRVMVYKFHEDEH 60
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q
Sbjct: 61 GEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQS 120
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVC 369
+CLV STLR+PHGCH QYMTNMGSIASL MA+IIN ++SM+LWGLVVC
Sbjct: 121 ICLVGSTLRAPHGCHAQYMTNMGSIASLAMAIIINGNEEDGNGVNTGGRNSMRLWGLVVC 180
Query: 370 HHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFS 429
HHTS R IPFPLR ACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P
Sbjct: 181 HHTSARCIPFPLRCACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPTG 240
Query: 430 IVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLA 489
IVTQ PSIMDLVKC+GAA Y G+ + +GV PTE+Q+ DI WLL NH D TGLSTDSL
Sbjct: 241 IVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIGEWLLANHSDSTGLSTDSLG 300
Query: 490 EAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPR 549
+AGYP AA LG AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +MHPR
Sbjct: 301 DAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPR 360
Query: 550 SSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM- 607
+SF+AFLEVVK+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M
Sbjct: 361 ASFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKASAPGGVQPHGDDMA 420
Query: 608 -QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
QG+ E+ +VA EM+RLIETAT PIF VD G INGWNAK+AELTGL EAMGKSL+ +
Sbjct: 421 EQGLQEIGTVAREMIRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEEAMGKSLVRD 480
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
++++E + + L+ AL G+E KNVE+KL+ F + Q V+++VNAC+S+DY NN+ G
Sbjct: 481 LIYKEYEETADRLLSCALKGDEGKNVEVKLKTFAPELQGKAVFVVVNACSSKDYLNNIVG 540
Query: 727 VCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTG 786
VCFVGQD+ K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TG
Sbjct: 541 VCFVGQDVIGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCIEWNTAMEKLTG 600
Query: 787 WMRHEVIG 794
W R EVIG
Sbjct: 601 WPRSEVIG 608
>gi|363547732|gb|AEW26908.1| phytochrome P [Encephalartos msinganus]
Length = 582
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/592 (71%), Positives = 488/592 (82%), Gaps = 15/592 (2%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGASLAKA 154
LAVEE T+RII YSEN + MLDL +S E+F IG D RTLFTP S L KA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEEFLT---IGTDVRTLFTPSSALPLEKA 57
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
AA++EISL+NPI +HS S KPFYAI+HRIDVG+VID EP GD A S+AGAVQSQK
Sbjct: 58 AAAQEISLMNPIWMHSKSSG--KPFYAIVHRIDVGMVIDFEPV--GDAATSVAGAVQSQK 113
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AISRLQ+LPGGDIGLLCDTVVEDV++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLE
Sbjct: 114 LAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLE 173
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ+ EL+QPLCLV STLR+PHG
Sbjct: 174 PYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHG 233
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSL 394
CH QYM +MGSIASLVMAV+IN + KLWGLVVCHHTSPR +PFPLRYACE L+QAF L
Sbjct: 234 CHAQYMASMGSIASLVMAVVING--NTKLWGLVVCHHTSPRAVPFPLRYACEILMQAFGL 291
Query: 395 QLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRC 454
QL ME+Q+A QL EK IL+TQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG
Sbjct: 292 QLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGLV 351
Query: 455 WLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSK 514
W +GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP AA LG AVCGMA ARIT+K
Sbjct: 352 WALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAARITAK 411
Query: 515 DFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAI 574
DFLFWFRSHTAKE+KWGGAKH P+ KD+ +MHPRSSFKAFLEVVK RS PWE E++AI
Sbjct: 412 DFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRSLPWENVEMDAI 471
Query: 575 HSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGV 634
HSLQ+++R SFQ++ +++++K +++ N ++Q +DELSSVA EMVRLIETATAPI V
Sbjct: 472 HSLQLILRGSFQDI-DDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAPILAV 530
Query: 635 DSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
DS G +NGWNAK+AELTGLP EAMGKSL+ ++V+EES VE L+ AL G
Sbjct: 531 DSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHALRG 582
>gi|406685313|gb|AFS51097.1| phytochrome P, partial [Athrotaxis selaginoides]
Length = 594
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/598 (69%), Positives = 477/598 (79%), Gaps = 30/598 (5%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE-----DFELNGL-- 134
AYLS++QRGG IQPFGCMLAVEE +FRII YSEN EMLD +SE D E+
Sbjct: 1 AYLSRMQRGGRIQPFGCMLAVEENSFRIIAYSENAAEMLDAAGKSESQSVPDMEIRVAVR 60
Query: 135 IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDL 194
IG D R LF P S +L +AA ++EIS+ NPI S S KPFYAI+HRIDVGIVIDL
Sbjct: 61 IGSDVRRLFKPWSARNLERAAMTQEISVSNPIAAESKS---GKPFYAIVHRIDVGIVIDL 117
Query: 195 EPSKSGDPALSLAGAVQ---------SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKL 245
EP + + A +A SQ+LAV AISRLQA+P GDIGLLCD VVE+V++L
Sbjct: 118 EPVRREEAAALVAWGGAEGMAGGAMPSQRLAVRAISRLQAVPNGDIGLLCDAVVEEVREL 177
Query: 246 TGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDC 305
TGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC
Sbjct: 178 TGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDC 237
Query: 306 HAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-------- 357
PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 RVSPVSVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGG 297
Query: 358 --KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQ 415
+ SMKLWGLVVCHHTSPR +PFPLR AC FL+Q F LQ+ MELQ+A QL E NILRTQ
Sbjct: 298 SGRTSMKLWGLVVCHHTSPRAVPFPLRSACGFLMQTFGLQINMELQLAAQLTENNILRTQ 357
Query: 416 VLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLN 475
LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL
Sbjct: 358 TLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLE 417
Query: 476 NHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKH 535
HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 418 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKH 477
Query: 536 HPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK 595
HP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K
Sbjct: 478 HPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDSDTK 536
Query: 596 VQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGL 653
+ Q N K+QG+DELSSVA EMVRLIETATAPI VDS G +NGWNAKVAELTGL
Sbjct: 537 TMVHAQLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSGGIVNGWNAKVAELTGL 594
>gi|406685277|gb|AFS51079.1| phytochrome P, partial [Cephalotaxus sinensis]
Length = 604
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/608 (69%), Positives = 483/608 (79%), Gaps = 40/608 (6%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--------------E 127
AYLS++QRGG IQPFGCMLAVEE +F+II YSEN LEMLD+ S E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSHSVPTME 60
Query: 128 DFELNGL--IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHR 185
E G+ IG D R LFTP SG +L +AA S+EISL NPI + S+S KPFYAI+HR
Sbjct: 61 GGESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMDSSS---GKPFYAIVHR 117
Query: 186 IDVGIVIDLEPSKSGDPALSLA--------GAVQSQKLAVSAISRLQALPGGDIGLLCDT 237
IDVGIVIDLE + GD A ++ G V SQ+LAV A SRLQA+P GDIGLLCDT
Sbjct: 118 IDVGIVIDLELVRRGDAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDT 177
Query: 238 VVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQN 297
VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QN
Sbjct: 178 VVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQN 237
Query: 298 RVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS 357
RVRMICDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 RVRMICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNG 297
Query: 358 ------------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQ 405
+ SMKLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A Q
Sbjct: 298 NGNDEDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQ 357
Query: 406 LAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQ 465
L E NILRTQ LLCDMLLRDAP IV+QSPSIMDLVKCDGAALYYGG WL+GVTP E+Q
Sbjct: 358 LTENNILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMLWLLGVTPVEAQ 417
Query: 466 LKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTA 525
+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTA
Sbjct: 418 IKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTA 477
Query: 526 KEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSF 585
KE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SF
Sbjct: 478 KEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSF 537
Query: 586 QEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
+ + +++D+K + + N K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNA
Sbjct: 538 EGI-DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNA 596
Query: 646 KVAELTGL 653
KV ELTGL
Sbjct: 597 KVGELTGL 604
>gi|406685271|gb|AFS51076.1| phytochrome P, partial [Cephalotaxus fortunei]
Length = 604
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/608 (69%), Positives = 483/608 (79%), Gaps = 40/608 (6%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--------------E 127
AYLS++QRGG IQPFGCMLAVEE +F+II YSEN LEMLD+ S E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSHSVPTME 60
Query: 128 DFELNGL--IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHR 185
E G+ IG D R LFTP SG +L +AA S+EISL NPI + SNS KPFYAI+HR
Sbjct: 61 GGESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMDSNS---GKPFYAIVHR 117
Query: 186 IDVGIVIDLEPSKSGDPALSLA--------GAVQSQKLAVSAISRLQALPGGDIGLLCDT 237
IDVGIVIDLE + GD A ++ G V SQ+LAV A SRLQA+P GDIGLLCDT
Sbjct: 118 IDVGIVIDLELVRRGDAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDT 177
Query: 238 VVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQN 297
VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QN
Sbjct: 178 VVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQN 237
Query: 298 RVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS 357
RVRMICDC A PV VIQ++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 238 RVRMICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNG 297
Query: 358 ------------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQ 405
+ SMKLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A Q
Sbjct: 298 NGNDEDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQ 357
Query: 406 LAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQ 465
L E NILRTQ LLCDMLLRDAP IV+QSPSIMDLVKCDGAALYYGG WL+GVTP E+Q
Sbjct: 358 LTENNILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMFWLLGVTPVEAQ 417
Query: 466 LKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTA 525
+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTA
Sbjct: 418 IKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTA 477
Query: 526 KEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSF 585
KE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PW E++AIHSLQ+++R SF
Sbjct: 478 KEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWGNVEMDAIHSLQLILRGSF 537
Query: 586 QEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
+++ +++D+K + + N K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNA
Sbjct: 538 EDI-DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNA 596
Query: 646 KVAELTGL 653
KV ELTGL
Sbjct: 597 KVGELTGL 604
>gi|363547639|gb|AEW26862.1| phytochrome P [Ceratozamia microstrobila]
Length = 590
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/596 (69%), Positives = 487/596 (81%), Gaps = 9/596 (1%)
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGAS 150
IQPFGCMLAVEE TFRII YSEN MLDL +S E L IG D RTLFTP S S
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKEFLTIGTDVRTLFTPSSAMS 61
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KAAA++EISL NPI + S RS K FYAI+HRIDVG+VID EP GD ALS+AGAV
Sbjct: 62 LEKAAAAQEISLANPISMQS--RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVAGAV 117
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALP GDIG+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E+RR
Sbjct: 118 QSQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRR 177
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC + PV V+Q+ EL+QPLCLV STLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLR 237
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
+PHGCH QYM NMGSIASLVMAV++N+ + KLWGLVVCHHTSPR +PFP+R ACEFL+Q
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVVVNA--NAKLWGLVVCHHTSPRTVPFPVRCACEFLMQ 295
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A Q EK IL+TQ LLCDMLLRDAP IVTQ+PSIMDLV+CDGAAL Y
Sbjct: 296 AFGLQLNMELQLAAQAMEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCY 355
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
GG W +GV P E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA AR
Sbjct: 356 GGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAAR 415
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT+KDFLFWFRS TAKE+KWGG KHHP+ +D+G +MHPRSSFKAFLEVVK RSFPWE +E
Sbjct: 416 ITAKDFLFWFRSQTAKEIKWGGEKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENAE 475
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAP 630
++AIHSLQ+++R SF+++ ++ ++K +++ N ++ ++ELSSV EMVRLIETATAP
Sbjct: 476 MDAIHSLQLILRGSFEDI-DDTETKTMVHSRLNDLRVHSMEELSSVVSEMVRLIETATAP 534
Query: 631 IFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
I VDS G +NGWNAK+AELTGLP EA GKSL+ ++V E+S VE L+ A G
Sbjct: 535 ILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVCEDSMETVERLLRNASRG 590
>gi|327241180|gb|AEA40434.1| phytochrome A type 2 [Triticum aestivum]
Length = 889
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/863 (49%), Positives = 573/863 (66%), Gaps = 39/863 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVIS---PPEGVPE---EQITAYLSKIQRGG 91
++ DA L AEFE+S SF+YS+ V + P + E E++ AYL IQRG
Sbjct: 22 VLAQTTLDAQLNAEFEES---SDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHIQRGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPP 146
+IQ FGC+LA++E +F +I +SEN EML S + + L+ IG + R+LFT
Sbjct: 79 MIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVNDPPRLD--IGTNVRSLFTDQ 136
Query: 147 SGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSL 206
+L KA ++SLLNPILV + KPFYAI+HR + +D EP + S
Sbjct: 137 GATALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLAVDFEPVNPTEFPASA 194
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
AGA+QS KLA AIS++QALPGG I LLC+TVV++V +LTGYDRVM Y FH+D+HGEV +
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFA 254
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
EI + LEPYLG+H+PA DIPQAARFLF +N+VRMICD + + VI+ + L + L
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRSRSIKVIEDEALPFDISLCG 314
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMK---------------LWGLVVCHH 371
S LR+ H CHLQYM NM SIASLVMAV++N + LWGLVVCHH
Sbjct: 315 SALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCHH 374
Query: 372 TSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSI 430
SPRY PFPLRYACEFL Q F++ + E +V QL EK+ILRTQ +L DML ++A P +I
Sbjct: 375 ESPRYAPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRTQTILSDMLFKEASPLTI 434
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
V+ +P+IMDL+KCDGAAL YG + W +G PTESQ++D+A WL H D TGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGDKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHD 494
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGA+ LG +VCGMA A+I S D LFWFRSHTA+E++WGGAK+ P +D+ +MHPR
Sbjct: 495 AGYPGASALGDSVCGMAVAKINSSDILFWFRSHTAQEIRWGGAKNDPSDQDDSRRMHPRL 554
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGV 610
SFKAFLEVVK +S W SE++AIHSLQ+++R + + + K + Q K+ G+
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPT-GKASLDEQIGDLKLDGL 613
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E
Sbjct: 614 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEE 672
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 673 SSVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFV 732
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY AII + NPLIPPIF +DE C EWNAAM K+TGW R
Sbjct: 733 AQDVTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHRE 792
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EV+ KML E+F + C +K +D +++ + G+ TE PFGFF+R G++ +
Sbjct: 793 EVLNKMLLGEVFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTDC 852
Query: 848 ALTASRRTDAEGKVIGCFCFMQI 870
L+ +RR + G + G FCF+ I
Sbjct: 853 LLSVNRRENEGGLITGVFCFIHI 875
>gi|406685273|gb|AFS51077.1| phytochrome P, partial [Cephalotaxus harringtonia]
Length = 604
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/608 (68%), Positives = 483/608 (79%), Gaps = 40/608 (6%)
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS--------------E 127
AYLS++QRGG IQPFGCMLAVEE +F+II YSEN LEMLD+ S E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSHSVPTME 60
Query: 128 DFELNGL--IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHR 185
E G+ IG D R LFTP SG +L +AA S+EISL NPI + SNS KPFYAI+HR
Sbjct: 61 GGESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMDSNS---GKPFYAIVHR 117
Query: 186 IDVGIVIDLEPSKSGDPALSLA--------GAVQSQKLAVSAISRLQALPGGDIGLLCDT 237
IDVGIVIDLE + G+ A ++ G V SQ+LAV A SRLQA+P GDIGLLCDT
Sbjct: 118 IDVGIVIDLELVRRGNAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDT 177
Query: 238 VVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQN 297
VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF Q+
Sbjct: 178 VVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQD 237
Query: 298 RVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS 357
RVRMICDC A PV VIQ++ELKQPLCLV STLR+PHGCH YM NMGSIASLVMAVI+N
Sbjct: 238 RVRMICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAXYMANMGSIASLVMAVIVNG 297
Query: 358 ------------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQ 405
+ SMKLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A Q
Sbjct: 298 NGNGEDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQ 357
Query: 406 LAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQ 465
L E NILRTQ LLCDMLLRDAP IV+QSPSIMDLVKCDGAALYYGG WL+GVTP E+Q
Sbjct: 358 LTENNILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMFWLLGVTPVEAQ 417
Query: 466 LKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTA 525
+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWFRSHTA
Sbjct: 418 IKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTA 477
Query: 526 KEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSF 585
KE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SF
Sbjct: 478 KEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSF 537
Query: 586 QEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
+++ +++D+K + + N K+QG+DELSSVA EMVRLIETATAPI VDS+G +NGWNA
Sbjct: 538 EDI-DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNA 596
Query: 646 KVAELTGL 653
KV ELTGL
Sbjct: 597 KVGELTGL 604
>gi|327241206|gb|AEA40447.1| phytochrome A [Amblyopyrum muticum]
Length = 1130
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/948 (46%), Positives = 606/948 (63%), Gaps = 46/948 (4%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSVISP-------PEGVPEEQITAYLSKIQRGGLIQPFG 97
DA L EFE+S SF+YS+ V + EG E I AYL IQRG +Q FG
Sbjct: 29 DAELNTEFEES---NDSFDYSKLVEAQRDTPTVLQEGRSENAI-AYLQHIQRGKRLQSFG 84
Query: 98 CMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGLI-------GIDARTLFTPPSGAS 150
C+LA++E +F ++ +SEN EML S + + G++ G + +LFT +
Sbjct: 85 CLLALDEKSFNVVAFSENAPEMLTAVSHA----VPGVVDPPRLDMGTNVWSLFTDQGATA 140
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KA ++SLLNPILV + KPFYAI+HR V+D EP + + AGA+
Sbjct: 141 LHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCFVVDFEPVNPTEFPATGAGAL 198
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
Q KLA AIS++QALPGG + LLC+T+V++V KL GYDRVM Y FH+D+HGEVV+EI +
Sbjct: 199 QPYKLAAKAISKIQALPGGSMELLCNTMVKEVFKLIGYDRVMAYKFHEDNHGEVVAEITK 258
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
LEPYLG+H+PA DIPQAAR +F + +VRMICD H + VI+ + L + L S LR
Sbjct: 259 PGLEPYLGLHYPATDIPQAARCVFMKTKVRMICDVHTRSIKVIEDEALPFDISLCGSALR 318
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMK---------------LWGLVVCHHTSPR 375
+ H CHLQYM NM SIASL MAV++N + LWGLVVCHH SPR
Sbjct: 319 AAHNCHLQYMENMSSIASLTMAVVVNENEEDDEVGSEQPAQQQQKKILWGLVVCHHESPR 378
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVTQS 434
Y+PFPLRYACEFL Q F++ + E +V QL EK+ILR Q +L ML ++A P +IV+ +
Sbjct: 379 YVPFPLRYACEFLAQVFAVHVNKEFEVQKQLHEKSILRMQTILSGMLFKEASPLTIVSGA 438
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDL+KCDGAAL YG + W +G PTESQ++D+A WL H D GLST+SL +AGY
Sbjct: 439 PNIMDLIKCDGAALLYGDKLWHLGNAPTESQIRDLALWLSEVHMDSIGLSTESLHDAGYL 498
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GA+ LG VCGMA A+I+S LFWFRSH A+E++WGGAK+ P +D+ +MHPR SFKA
Sbjct: 499 GASALGDMVCGMAVAKISSNHILFWFRSHIAEEIRWGGAKNDPSDQDDSRRMHPRLSFKA 558
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEVVK +S W SE++AIHSLQ+++R + + + K + Q K+ G+ EL
Sbjct: 559 FLEVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPT-GKASLDEQIGDLKLDGLAELQ 617
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S
Sbjct: 618 AVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESSVS 676
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV QD+
Sbjct: 677 VVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDM 736
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T K++MDKF R++GDY+AII + NPLIPPIF +DE C EWNAAM K+TGW + EV+
Sbjct: 737 TVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHKEEVLD 796
Query: 795 KMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
KML E+F + C +K +D ++ + G+ TE PFGFFNR G++ E L+
Sbjct: 797 KMLLGEVFDSRNASCLLKNKDAFVSLCAVINSALAGKETEKAPFGFFNRSGKYTECLLSV 856
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
+RR + +G + G FCF+ I +LQ AL+ Q + ++K +Y+R + NPL+G+
Sbjct: 857 NRRQNEDGLITGVFCFIHIPSHELQQALQVQQASEQASLKRLKAFSYMRHAINNPLSGML 916
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCI-EEGRCV 958
+ K L+++ ++E Q + + SD C Q+ I+ +D I E+ C+
Sbjct: 917 YSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDSIMEKSSCL 964
>gi|326489438|dbj|BAK01700.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1089
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/880 (48%), Positives = 579/880 (65%), Gaps = 26/880 (2%)
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAK 153
GC+LA++E +F +I +SEN EML S S D IG + R+LFT +L K
Sbjct: 43 GCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTEQGATALHK 102
Query: 154 AAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQ 213
A ++SLLNP LV + KPFYAI+HR +V+D EP + + AGA+QS
Sbjct: 103 ALGFADVSLLNPFLVQCKTSG--KPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQSY 160
Query: 214 KLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDL 273
KLA AIS++QALPGG + LLC+TVV++V +LTGYDRVM Y FH+D+HGEV +EI + L
Sbjct: 161 KLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKPGL 220
Query: 274 EPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPH 333
EPYLG+H+PA DIPQAARFLF +N+VRMICD A + VI+ + L + L S+LR+ H
Sbjct: 221 EPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCGSSLRAAH 280
Query: 334 GCHLQYMTNMGSIASLVMAVIIN---------------SKDSMKLWGLVVCHHTSPRYIP 378
CHLQYM NM SIASLVMAV++N + LWGLVVCHH SPRY+P
Sbjct: 281 SCHLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHHESPRYVP 340
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVTQSPSI 437
FPLRYACEFL Q F++ + E +V QL EK+ILR Q +L DML ++A P +IV+ +P+I
Sbjct: 341 FPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGTPNI 400
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDL+KCDGAAL YG + W +G PTESQ++ IA WL H D TGLST+SL +AGYPGA+
Sbjct: 401 MDLIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHDAGYPGAS 460
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG VCG+A A+I S D LFWFRSHTA+E++WGGAK+ P +D+ +MHPR SFKAFLE
Sbjct: 461 ALGDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRLSFKAFLE 520
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVA 617
VVK +S W E++AIHSLQ+++R + ++ + K + Q K+ G+ EL +V
Sbjct: 521 VVKMKSLAWSDYEMDAIHSLQLILRGALDDVAKPT-GKASLDEQIGDLKLDGIAELQAVT 579
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S V+
Sbjct: 580 SEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESSVPVVQ 638
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
++ AL G+E+K V ++ ++ V ++VNAC SRD ++V GVCFV QD+T
Sbjct: 639 RMLYLALQGKEEKEVRFDMKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDMTVH 698
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKF R++GDY AI+ + NPLIPPIF +DE CSEWNAAM K+TGW R EV+ KML
Sbjct: 699 KLVMDKFTRVKGDYMAIVHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHREEVLDKML 758
Query: 798 PREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
E+F + C +K +D +L+ + G+ TE PFGFF+R G++ E L+ + R
Sbjct: 759 LGEVFDSSNASCLLKNKDAFVGLCVLINSALAGEETEKAPFGFFDRSGKYTECLLSVNSR 818
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G + G FCF+ I +LQ AL+ Q + ++K +Y+R + NPL+G+ +
Sbjct: 819 ANEDGLITGVFCFIHIPSHELQQALQVQQASEQASLRRLKAFSYMRHAINNPLSGMLYSR 878
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
K L+++ ++E Q + + SD C Q+ I+ +D I E
Sbjct: 879 KALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 918
>gi|363547649|gb|AEW26867.1| phytochrome P [Ceratozamia sabatoi]
Length = 582
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/589 (69%), Positives = 484/589 (82%), Gaps = 9/589 (1%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGASLAKAAAS 157
LAVEE TFRII YSEN MLDL +S E L IG D RTLFTP S SL KAAA+
Sbjct: 1 LAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKEFLTIGTDVRTLFTPSSAMSLEKAAAA 60
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
+EISL NPI + S RS K FYAI+HRIDVG+VID EP GD ALS+AGAVQSQKLAV
Sbjct: 61 QEISLANPISMQS--RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVAGAVQSQKLAV 116
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
AISRLQALP GDIG+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E+RRSDLEPYL
Sbjct: 117 RAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYGFHEDEHGEVMAEMRRSDLEPYL 176
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+PA DIPQA+RFLF QNRVRMICDC + PV V+Q+ EL+QPLCLV STLR+PHGCH
Sbjct: 177 GLHYPATDIPQASRFLFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRAPHGCHA 236
Query: 338 QYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLY 397
QYM NMGSIASLVMAV++N+ + KLWGLVVCHHTSPR +PFP+R ACEFL+QAF LQL
Sbjct: 237 QYMANMGSIASLVMAVVVNA--NAKLWGLVVCHHTSPRTVPFPVRCACEFLMQAFGLQLN 294
Query: 398 MELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLV 457
MELQ+A Q EK IL+TQ LLCDMLLRDAP IVTQ+PSIMDLV+CDGAAL YGG W +
Sbjct: 295 MELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCYGGTVWAL 354
Query: 458 GVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFL 517
GV P E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARIT+KDFL
Sbjct: 355 GVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFL 414
Query: 518 FWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSL 577
FWFRS TAKE+KWGGAKHHP+ +D+ +MHPRSSFKAFLEVVK RSFPWE +E++AIHSL
Sbjct: 415 FWFRSQTAKEIKWGGAKHHPDDRDDARRMHPRSSFKAFLEVVKRRSFPWENAEMDAIHSL 474
Query: 578 QIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSS 637
Q+++R SF+++ ++ ++K +++ N ++Q ++ELSSVA EMVRLIETATAPI VDS
Sbjct: 475 QLILRGSFEDI-DDTETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAPILAVDSR 533
Query: 638 GTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
G +NGWNAK+AELTGLP EA G+SL+ ++V+E+S VE L+ AL G
Sbjct: 534 GLVNGWNAKIAELTGLPVGEATGRSLVGDLVYEDSMETVERLLRNALRG 582
>gi|363547641|gb|AEW26863.1| phytochrome P [Ceratozamia miqueliana]
Length = 582
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/589 (69%), Positives = 483/589 (82%), Gaps = 9/589 (1%)
Query: 100 LAVEEPTFRIIGYSENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGASLAKAAAS 157
LAVEE TFRII YSEN MLDL +S E L IG D RTL TP S L KAAA+
Sbjct: 1 LAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKEFLTIGTDVRTLLTPSSAMPLEKAAAA 60
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
+EISL NPI + S RS K FYAI+HRIDVG+VID EP GD ALS+AGAVQSQKLAV
Sbjct: 61 QEISLANPISMQS--RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVAGAVQSQKLAV 116
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
AISRLQALP GDIG+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E+RRSDLEPYL
Sbjct: 117 RAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRSDLEPYL 176
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+PA DIPQA+RFLF QNRVRMICDC + PV V+Q+ EL+QPLCLV STLR+PHGCH
Sbjct: 177 GLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRAPHGCHA 236
Query: 338 QYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLY 397
QYM NMGSIASLVMAV++N+ + KLWGLVVCHHTSPR +PFP+R ACEFL+QAF LQL
Sbjct: 237 QYMANMGSIASLVMAVVVNA--NTKLWGLVVCHHTSPRAVPFPVRCACEFLMQAFGLQLN 294
Query: 398 MELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLV 457
MELQ+A Q EK IL+TQ LLCDMLLRDAP IVTQ+PSIMDLV+CDGAAL YGG W +
Sbjct: 295 MELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCYGGTVWAL 354
Query: 458 GVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFL 517
GV P E+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARIT+KDFL
Sbjct: 355 GVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFL 414
Query: 518 FWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSL 577
FWFRS TAKE+KWGGAKHHP+ +D+G +MHPRSSFKAFLEVVK RSFPWE +E++AIHSL
Sbjct: 415 FWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENAEMDAIHSL 474
Query: 578 QIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSS 637
Q+++R SF+++++ ++K +++ N ++Q ++ELSSVA EMVRLIETATAPI VDS
Sbjct: 475 QLILRGSFEDIDDA-ETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAPILAVDSR 533
Query: 638 GTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
G +NGWNAK+AELTGLP EA GKSL+ ++V+E+S VE L+ AL G
Sbjct: 534 GLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNALRG 582
>gi|410718222|gb|AFV79487.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/686 (58%), Positives = 505/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + N + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGNGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+Q
Sbjct: 539 GQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLQ 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718260|gb|AFV79506.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/686 (58%), Positives = 505/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQGTE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQGTEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718214|gb|AFV79483.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/686 (58%), Positives = 504/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LTK I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTKLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKVLTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718130|gb|AFV79441.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/686 (57%), Positives = 504/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718258|gb|AFV79505.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/686 (57%), Positives = 504/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718122|gb|AFV79437.1| phytochrome N, partial [Pinus sylvestris]
gi|410718124|gb|AFV79438.1| phytochrome N, partial [Pinus sylvestris]
gi|410718126|gb|AFV79439.1| phytochrome N, partial [Pinus sylvestris]
gi|410718134|gb|AFV79443.1| phytochrome N, partial [Pinus sylvestris]
gi|410718136|gb|AFV79444.1| phytochrome N, partial [Pinus sylvestris]
gi|410718138|gb|AFV79445.1| phytochrome N, partial [Pinus sylvestris]
gi|410718142|gb|AFV79447.1| phytochrome N, partial [Pinus sylvestris]
gi|410718144|gb|AFV79448.1| phytochrome N, partial [Pinus sylvestris]
gi|410718150|gb|AFV79451.1| phytochrome N, partial [Pinus sylvestris]
gi|410718152|gb|AFV79452.1| phytochrome N, partial [Pinus sylvestris]
gi|410718154|gb|AFV79453.1| phytochrome N, partial [Pinus sylvestris]
gi|410718156|gb|AFV79454.1| phytochrome N, partial [Pinus sylvestris]
gi|410718158|gb|AFV79455.1| phytochrome N, partial [Pinus sylvestris]
gi|410718160|gb|AFV79456.1| phytochrome N, partial [Pinus sylvestris]
gi|410718162|gb|AFV79457.1| phytochrome N, partial [Pinus sylvestris]
gi|410718164|gb|AFV79458.1| phytochrome N, partial [Pinus sylvestris]
gi|410718168|gb|AFV79460.1| phytochrome N, partial [Pinus sylvestris]
gi|410718172|gb|AFV79462.1| phytochrome N, partial [Pinus sylvestris]
gi|410718176|gb|AFV79464.1| phytochrome N, partial [Pinus sylvestris]
gi|410718178|gb|AFV79465.1| phytochrome N, partial [Pinus sylvestris]
gi|410718180|gb|AFV79466.1| phytochrome N, partial [Pinus sylvestris]
gi|410718182|gb|AFV79467.1| phytochrome N, partial [Pinus sylvestris]
gi|410718184|gb|AFV79468.1| phytochrome N, partial [Pinus sylvestris]
gi|410718186|gb|AFV79469.1| phytochrome N, partial [Pinus sylvestris]
gi|410718188|gb|AFV79470.1| phytochrome N, partial [Pinus sylvestris]
gi|410718190|gb|AFV79471.1| phytochrome N, partial [Pinus sylvestris]
gi|410718192|gb|AFV79472.1| phytochrome N, partial [Pinus sylvestris]
gi|410718194|gb|AFV79473.1| phytochrome N, partial [Pinus sylvestris]
gi|410718196|gb|AFV79474.1| phytochrome N, partial [Pinus sylvestris]
gi|410718198|gb|AFV79475.1| phytochrome N, partial [Pinus sylvestris]
gi|410718200|gb|AFV79476.1| phytochrome N, partial [Pinus sylvestris]
gi|410718202|gb|AFV79477.1| phytochrome N, partial [Pinus sylvestris]
gi|410718204|gb|AFV79478.1| phytochrome N, partial [Pinus sylvestris]
gi|410718206|gb|AFV79479.1| phytochrome N, partial [Pinus sylvestris]
gi|410718208|gb|AFV79480.1| phytochrome N, partial [Pinus sylvestris]
gi|410718210|gb|AFV79481.1| phytochrome N, partial [Pinus sylvestris]
gi|410718212|gb|AFV79482.1| phytochrome N, partial [Pinus sylvestris]
gi|410718216|gb|AFV79484.1| phytochrome N, partial [Pinus sylvestris]
gi|410718220|gb|AFV79486.1| phytochrome N, partial [Pinus sylvestris]
gi|410718224|gb|AFV79488.1| phytochrome N, partial [Pinus sylvestris]
gi|410718226|gb|AFV79489.1| phytochrome N, partial [Pinus sylvestris]
gi|410718228|gb|AFV79490.1| phytochrome N, partial [Pinus sylvestris]
gi|410718230|gb|AFV79491.1| phytochrome N, partial [Pinus sylvestris]
gi|410718232|gb|AFV79492.1| phytochrome N, partial [Pinus sylvestris]
gi|410718234|gb|AFV79493.1| phytochrome N, partial [Pinus sylvestris]
gi|410718236|gb|AFV79494.1| phytochrome N, partial [Pinus sylvestris]
gi|410718238|gb|AFV79495.1| phytochrome N, partial [Pinus sylvestris]
gi|410718240|gb|AFV79496.1| phytochrome N, partial [Pinus sylvestris]
gi|410718242|gb|AFV79497.1| phytochrome N, partial [Pinus sylvestris]
gi|410718244|gb|AFV79498.1| phytochrome N, partial [Pinus sylvestris]
gi|410718246|gb|AFV79499.1| phytochrome N, partial [Pinus sylvestris]
gi|410718248|gb|AFV79500.1| phytochrome N, partial [Pinus sylvestris]
gi|410718250|gb|AFV79501.1| phytochrome N, partial [Pinus sylvestris]
gi|410718252|gb|AFV79502.1| phytochrome N, partial [Pinus sylvestris]
gi|410718256|gb|AFV79504.1| phytochrome N, partial [Pinus sylvestris]
gi|410718262|gb|AFV79507.1| phytochrome N, partial [Pinus sylvestris]
gi|410718266|gb|AFV79509.1| phytochrome N, partial [Pinus sylvestris]
gi|410718274|gb|AFV79513.1| phytochrome N, partial [Pinus sylvestris]
gi|410718276|gb|AFV79514.1| phytochrome N, partial [Pinus sylvestris]
gi|410718282|gb|AFV79517.1| phytochrome N, partial [Pinus sylvestris]
gi|410718284|gb|AFV79518.1| phytochrome N, partial [Pinus sylvestris]
gi|410718288|gb|AFV79520.1| phytochrome N, partial [Pinus sylvestris]
gi|410718290|gb|AFV79521.1| phytochrome N, partial [Pinus sylvestris]
gi|410718292|gb|AFV79522.1| phytochrome N, partial [Pinus sylvestris]
gi|410718296|gb|AFV79524.1| phytochrome N, partial [Pinus sylvestris]
gi|410718306|gb|AFV79529.1| phytochrome N, partial [Pinus sylvestris]
gi|410718308|gb|AFV79530.1| phytochrome N, partial [Pinus sylvestris]
gi|410718310|gb|AFV79531.1| phytochrome N, partial [Pinus sylvestris]
gi|410718314|gb|AFV79533.1| phytochrome N, partial [Pinus sylvestris]
gi|410718316|gb|AFV79534.1| phytochrome N, partial [Pinus sylvestris]
gi|410718318|gb|AFV79535.1| phytochrome N, partial [Pinus sylvestris]
gi|410718324|gb|AFV79538.1| phytochrome N, partial [Pinus sylvestris]
gi|410718328|gb|AFV79540.1| phytochrome N, partial [Pinus sylvestris]
gi|410718330|gb|AFV79541.1| phytochrome N, partial [Pinus sylvestris]
gi|410718332|gb|AFV79542.1| phytochrome N, partial [Pinus sylvestris]
gi|410718336|gb|AFV79544.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/686 (57%), Positives = 504/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718140|gb|AFV79446.1| phytochrome N, partial [Pinus sylvestris]
gi|410718218|gb|AFV79485.1| phytochrome N, partial [Pinus sylvestris]
gi|410718268|gb|AFV79510.1| phytochrome N, partial [Pinus sylvestris]
gi|410718270|gb|AFV79511.1| phytochrome N, partial [Pinus sylvestris]
gi|410718278|gb|AFV79515.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/686 (57%), Positives = 504/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHILEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718120|gb|AFV79436.1| phytochrome N, partial [Pinus sylvestris]
gi|410718166|gb|AFV79459.1| phytochrome N, partial [Pinus sylvestris]
gi|410718254|gb|AFV79503.1| phytochrome N, partial [Pinus sylvestris]
gi|410718264|gb|AFV79508.1| phytochrome N, partial [Pinus sylvestris]
gi|410718298|gb|AFV79525.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/686 (57%), Positives = 504/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKVLTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718334|gb|AFV79543.1| phytochrome N, partial [Pinus sylvestris]
gi|410718338|gb|AFV79545.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/686 (57%), Positives = 504/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKVLTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718346|gb|AFV79549.1| phytochrome N, partial [Pinus pinaster]
Length = 850
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/686 (57%), Positives = 502/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY G
Sbjct: 121 GIQLNKEVELAAQMREKRILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEG 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+G TPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGATPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSCKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K +MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKTVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L + GQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMAGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718286|gb|AFV79519.1| phytochrome N, partial [Pinus sylvestris]
gi|410718294|gb|AFV79523.1| phytochrome N, partial [Pinus sylvestris]
gi|410718300|gb|AFV79526.1| phytochrome N, partial [Pinus sylvestris]
gi|410718302|gb|AFV79527.1| phytochrome N, partial [Pinus sylvestris]
gi|410718304|gb|AFV79528.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/686 (57%), Positives = 503/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ L + +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPL-NNLVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718146|gb|AFV79449.1| phytochrome N, partial [Pinus sylvestris]
gi|410718170|gb|AFV79461.1| phytochrome N, partial [Pinus sylvestris]
gi|410718174|gb|AFV79463.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/686 (57%), Positives = 503/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +D CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDGCGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718132|gb|AFV79442.1| phytochrome N, partial [Pinus sylvestris]
gi|410718280|gb|AFV79516.1| phytochrome N, partial [Pinus sylvestris]
gi|410718312|gb|AFV79532.1| phytochrome N, partial [Pinus sylvestris]
gi|410718320|gb|AFV79536.1| phytochrome N, partial [Pinus sylvestris]
gi|410718322|gb|AFV79537.1| phytochrome N, partial [Pinus sylvestris]
gi|410718326|gb|AFV79539.1| phytochrome N, partial [Pinus sylvestris]
gi|410718340|gb|AFV79546.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/686 (57%), Positives = 503/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERSPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718148|gb|AFV79450.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/686 (57%), Positives = 503/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS ++QI+ I+D MDL IE+G
Sbjct: 659 VETSALFQKQILKILDDMDLESIEDG 684
>gi|410718128|gb|AFV79440.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/686 (57%), Positives = 503/686 (73%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERSPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLR+ACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRHACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNV 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+++L++ ++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 QIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|410718272|gb|AFV79512.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/686 (57%), Positives = 494/686 (72%), Gaps = 17/686 (2%)
Query: 285 DIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMG 344
DIPQA+RFLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMG
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 345 SIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
SIASLVMAV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
+QL E+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
WL+GVTPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
SKDFLFWFRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
AIHSLQ+++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI
Sbjct: 301 AIHSLQLILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VD+ G +NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQXX 418
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
+LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY
Sbjct: 419 XXXXXXXXXXXXXXXXVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYR 478
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
AI+Q+ +PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+K
Sbjct: 479 AIVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLK 538
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQ+ LT+ I+L +TGQGTE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+
Sbjct: 539 GQNALTQLRIILNSSMTGQGTEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLH 598
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I P+LQ AL Q + + ++K L Y+R E+KNPL GI F K++E + + E+QRQ
Sbjct: 599 IASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQL 658
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
+ETS C++QI+ I+D MDL IE+G
Sbjct: 659 VETSALCQKQILKILDDMDLESIEDG 684
>gi|57281885|emb|CAC85513.1| phytochrome A [Triticum aestivum]
Length = 807
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/799 (50%), Positives = 540/799 (67%), Gaps = 30/799 (3%)
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRS-----EDFELNGLIGIDARTLFTPPSGAS 150
FGC+LA++E +F +I +SEN EML S + + L+ IG + R+LFT +
Sbjct: 1 FGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVNDPPRLD--IGTNVRSLFTDQGATA 58
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L KA ++SLLNPILV + KPFYAI+HR +V+D EP + S AGA+
Sbjct: 59 LHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVNPTEFPASAAGAL 116
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QS KLA AIS++QALPGG I LLC+TVV++V +LTGYDRVM Y FH+D+HGEV +EI +
Sbjct: 117 QSYKLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITK 176
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
LEPYLG+H+PA DIPQAARFLF +N+VRMICD + + VI+ + L + L S LR
Sbjct: 177 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRSRSIKVIEDEALPFDISLCGSALR 236
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSMK---------------LWGLVVCHHTSPR 375
+ H CHLQYM NM SIASLVMAV++N + LWGLVVCHH SPR
Sbjct: 237 AAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQQKKILWGLVVCHHESPR 296
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVTQS 434
Y+PFPLRYACEFL Q F++ + E +V QL EK+ILRTQ +L DML ++A P +IV+ +
Sbjct: 297 YVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRTQTILSDMLFKEASPLTIVSGA 356
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDL+KCDGAAL YG + W +G PTESQ++D+A WL H D TGLST+SL +AGYP
Sbjct: 357 PNIMDLIKCDGAALLYGDKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYP 416
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GA+ LG +VCGMA A+I S D LFWFRSHTA+E++WGGAK+ P +D+ +MHPR SFKA
Sbjct: 417 GASALGDSVCGMAVAKINSSDILFWFRSHTAQEIRWGGAKNDPSDQDDSRRMHPRLSFKA 476
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEVVK +S W SE++AIHSLQ+++R + + + K + Q K+ G+ EL
Sbjct: 477 FLEVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPT-GKASLDEQIGDLKLDGLAELQ 535
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S
Sbjct: 536 AVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESSVS 594
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV QD+
Sbjct: 595 VVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDV 654
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T K++MDKF R++GDY AII + NPLIPPIF +DE C EWNAAM K+TGW R EV+
Sbjct: 655 TVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHREEVLN 714
Query: 795 KMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
KML E+F + C +K +D +++ + G+ TE PFGFF+R G++ + L+
Sbjct: 715 KMLLGEVFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTDCLLSV 774
Query: 852 SRRTDAEGKVIGCFCFMQI 870
+RR + G + G FCF+ I
Sbjct: 775 NRRENEGGLITGVFCFIHI 793
>gi|363547631|gb|AEW26858.1| phytochrome P [Ceratozamia fuscoviridis]
Length = 568
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/575 (68%), Positives = 471/575 (81%), Gaps = 9/575 (1%)
Query: 114 ENCLEMLDLRSRS-EDFELNGL-IGIDARTLFTPPSGASLAKAAASREISLLNPILVHSN 171
EN MLDL +S E L IG D RTLFTP S SL KAAA++EISL NPI + S
Sbjct: 1 ENAAGMLDLAPQSVPTMEKEFLTIGTDVRTLFTPSSAMSLEKAAAAQEISLANPISMQS- 59
Query: 172 SRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDI 231
RS K FYAI+HRIDVG+VID EP GD ALS+AGAVQSQKLAV AISRLQALP GDI
Sbjct: 60 -RSSGKAFYAIVHRIDVGMVIDFEPL--GDAALSVAGAVQSQKLAVRAISRLQALPAGDI 116
Query: 232 GLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAAR 291
G+LCD+VV+DV++LTGYDRVM+Y FH+D+HGEV++E+RRSDLEPYLG+H+PA DIPQA+R
Sbjct: 117 GMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRSDLEPYLGLHYPATDIPQASR 176
Query: 292 FLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVM 351
FLF QNRVRMICDC + PV V+Q+ EL+QPLCLV STLR+PHGCH QYM NMGSIASLVM
Sbjct: 177 FLFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVM 236
Query: 352 AVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNI 411
AV++N+ + KLWGLVVCHHTSPR +PFP+R ACEFL+QAF LQL MELQ+A Q EK I
Sbjct: 237 AVVVNA--NTKLWGLVVCHHTSPRTVPFPVRCACEFLMQAFGLQLNMELQLAAQATEKRI 294
Query: 412 LRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAW 471
L+TQ LLCDMLLRDAP IVTQ+PSIMDLV+CDGAAL YGG W +GV P E+Q+KDIA
Sbjct: 295 LKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCYGGTVWALGVAPAEAQIKDIAD 354
Query: 472 WLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWG 531
WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARIT+KDFLFWFRS TAKE+KWG
Sbjct: 355 WLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFLFWFRSQTAKEIKWG 414
Query: 532 GAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEE 591
G KHHP+ +D+G +MHPRSSFKAFLEVVK RSFPWE +E++AIHSLQ+++R SF+++ ++
Sbjct: 415 GEKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENAEMDAIHSLQLILRGSFEDI-DD 473
Query: 592 NDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELT 651
++K +++ N ++Q ++ELSSVA EMVRLIETATAPI VDS G +NGWNAK+AELT
Sbjct: 474 TETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAPILAVDSRGLVNGWNAKIAELT 533
Query: 652 GLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
GLP EA GKSL+ ++V+E+S VE L+ A G
Sbjct: 534 GLPVGEATGKSLVGDLVYEDSMETVERLLRNASRG 568
>gi|406685295|gb|AFS51088.1| phytochrome P, partial [Taxus sumatrana]
Length = 543
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/534 (72%), Positives = 445/534 (83%), Gaps = 15/534 (2%)
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
G+V SQ+LAV A SRLQA+P GDIGLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV+
Sbjct: 11 GGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVA 70
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS ELKQPLCLV
Sbjct: 71 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQSGELKQPLCLVG 130
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINS--------------KDSMKLWGLVVCHHT 372
STLR+PHGCH QYM NMGSIASLVMAVI+N + SMKLWGLVVCHHT
Sbjct: 131 STLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGGGSGRSSMKLWGLVVCHHT 190
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
SPR +PFPLR ACEFL+Q F LQ+ MELQ+A+QL E NILRTQ LLCDMLLRDAP IVT
Sbjct: 191 SPRAVPFPLRSACEFLMQTFGLQINMELQLAVQLIENNILRTQTLLCDMLLRDAPIGIVT 250
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
QSPSIMDLVKCDGAALYYGG CWL+GVTP E+Q+KDIA WLL HGD TGLSTDSLA+ G
Sbjct: 251 QSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLLECHGDSTGLSTDSLADTG 310
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSF
Sbjct: 311 YPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSF 370
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DE
Sbjct: 371 KAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDSDTKTMVHARLNDLKLQGIDE 429
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
LSSVA EMVRLIETATAPI VDSSG +NGWNAKV ELTGLP EAMGKSL+ ++V +ES
Sbjct: 430 LSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPVGEAMGKSLVHDLVFDES 489
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
VE ++ A+ GEE+KNVE+KLR F QKQ V+Y++VNAC+SRDY +N+ G
Sbjct: 490 VETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNACSSRDYTDNIVG 543
>gi|406685297|gb|AFS51089.1| phytochrome P, partial [Taxus wallichiana]
Length = 543
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/534 (72%), Positives = 445/534 (83%), Gaps = 15/534 (2%)
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
G+V SQ+LAV A SRLQA+P GDIGLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV+
Sbjct: 11 GGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVA 70
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS ELKQPLCLV
Sbjct: 71 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQSGELKQPLCLVG 130
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINS--------------KDSMKLWGLVVCHHT 372
STLR+PHGCH QYM NMGSIASLVMAVI+N + SMKLWGLVVCHHT
Sbjct: 131 STLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGGGSGRSSMKLWGLVVCHHT 190
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
SPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E NILRTQ LLCDMLLRDAP IVT
Sbjct: 191 SPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRTQTLLCDMLLRDAPIGIVT 250
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
QSPSIMDLVKCDGAALYYGG CWL+GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AG
Sbjct: 251 QSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLLECHGDSTGLSTDSLADAG 310
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSF
Sbjct: 311 YPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSF 370
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK RS PWE E++AIHSL++++R SFQ++ +++D+K + + N K+QG+DE
Sbjct: 371 KAFLEVVKRRSLPWENVEMDAIHSLRLILRGSFQDI-DDSDTKTMVHARLNDLKLQGIDE 429
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
LSSVA EMVRLIETATAPI VDSSG +NGWNAKV ELTGLP EAMGKSL+ ++V +ES
Sbjct: 430 LSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPVGEAMGKSLVHDLVFDES 489
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
VE ++ A+ GEE+KNVE+KLR F QKQ V+Y++VNAC+SRDY +N+ G
Sbjct: 490 VETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNACSSRDYTDNIVG 543
>gi|406685285|gb|AFS51083.1| phytochrome P, partial [Taxus wallichiana var. chinensis]
Length = 543
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/534 (72%), Positives = 445/534 (83%), Gaps = 15/534 (2%)
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
G+V SQ+LAV A SRLQA+P GDIGLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV+
Sbjct: 11 GGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVA 70
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS ELKQPLCLV
Sbjct: 71 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQSGELKQPLCLVG 130
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINS--------------KDSMKLWGLVVCHHT 372
STLR+PHGCH QYM NMGSIASLVMAVI+N + SMKLWGLVVCHHT
Sbjct: 131 STLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGGGSGRSSMKLWGLVVCHHT 190
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
SPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E NILRTQ LLCDMLLRDAP IVT
Sbjct: 191 SPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRTQTLLCDMLLRDAPIGIVT 250
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
QSPSIMDLVKCDGAALYYGG CWL+GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AG
Sbjct: 251 QSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLLECHGDSTGLSTDSLADAG 310
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSF
Sbjct: 311 YPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSF 370
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DE
Sbjct: 371 KAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDSDTKTMVHARLNDLKLQGIDE 429
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
LSSVA EMVRLIETATAPI VDSSG +NGWNAKV ELTGLP EAMGKSL+ ++V +ES
Sbjct: 430 LSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPVGEAMGKSLVHDLVFDES 489
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
VE ++ A+ GEE+KNVE+KLR F QKQ V+Y++VNAC+SRDY +++ G
Sbjct: 490 VETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNACSSRDYTDSIVG 543
>gi|406685279|gb|AFS51080.1| phytochrome P, partial [Pseudotaxus chienii]
Length = 548
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/534 (71%), Positives = 442/534 (82%), Gaps = 17/534 (3%)
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
+V SQ+LAV A SRLQ +P GDIGLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 16 SVPSQRLAVRATSRLQEVPSGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVAEI 75
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++ELKQPLCLV ST
Sbjct: 76 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAEELKQPLCLVGST 135
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINS----------------KDSMKLWGLVVCHHT 372
LR+PHGCH QYM NMGSIASLVMAVI+N + SMKLWGLVVCHHT
Sbjct: 136 LRAPHGCHAQYMANMGSIASLVMAVIVNGIGNGNDEDGGGGSGSGRSSMKLWGLVVCHHT 195
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVT 432
SPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E NILRTQ LLCDMLLRDAP IVT
Sbjct: 196 SPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRTQTLLCDMLLRDAPIGIVT 255
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
QSPSIM+LVKCDGAALYYGG CWL+GVTP E+Q+KDI WLL HGD TGLSTDSLA+AG
Sbjct: 256 QSPSIMNLVKCDGAALYYGGMCWLLGVTPMEAQIKDITEWLLECHGDSTGLSTDSLADAG 315
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSF
Sbjct: 316 YPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSF 375
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDE 612
KAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DE
Sbjct: 376 KAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDSDTKTMAHARLNDLKLQGIDE 434
Query: 613 LSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEES 672
LSSVA EMVRLIETATAPI VDSSG +NGWNAKV ELTGL EAMGKSL+ ++V +ES
Sbjct: 435 LSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLTVGEAMGKSLVHDLVFDES 494
Query: 673 QGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
VE ++ A+ GEE+KNVE+KLR F QKQ V+Y++VNAC+SRDY +N+ G
Sbjct: 495 VETVEKMLYHAMRGEEEKNVEIKLRTFGPQKQKKVIYLVVNACSSRDYTDNIVG 548
>gi|406685299|gb|AFS51090.1| phytochrome P, partial [Torreya californica]
Length = 548
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/533 (71%), Positives = 439/533 (82%), Gaps = 17/533 (3%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQ+LAV A SRLQ++P GDIGLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 17 VPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 76
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV V Q++ELKQPLCLV STL
Sbjct: 77 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVKQAEELKQPLCLVGSTL 136
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKD----------------SMKLWGLVVCHHTS 373
R+PHGCH QYM NMGSIASLVMAVI+N S+KLWGLVVCHHTS
Sbjct: 137 RAPHGCHAQYMANMGSIASLVMAVIVNGNGIDEDGVSGSGSGSGRSSIKLWGLVVCHHTS 196
Query: 374 PRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQ 433
PR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E +ILRTQ LLCDMLLRDAP IVTQ
Sbjct: 197 PRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENSILRTQTLLCDMLLRDAPIGIVTQ 256
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
SPSIMDLVKCDGAALYYGG WL+GVTP E+QLKDIA WLL HGD TGLSTDSLA+AGY
Sbjct: 257 SPSIMDLVKCDGAALYYGGMFWLLGVTPIEAQLKDIADWLLECHGDSTGLSTDSLADAGY 316
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGAA LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFK
Sbjct: 317 PGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFK 376
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVVK RSFPWE E++AIHSLQ+++R SFQ++++ +K + + N K+QG+DEL
Sbjct: 377 AFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDIDDSG-TKTMVHARLNDLKLQGIDEL 435
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
SSVA EMVRLIETATAPI VDSSG +NGWNAKV ELTGLP EAMGKSL+ ++V EES
Sbjct: 436 SSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPVGEAMGKSLVHDLVFEESI 495
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
VE ++ AL GEE+KNVE+KLR F QKQ V+Y++VNAC+SRDY + + G
Sbjct: 496 ETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIYLVVNACSSRDYTDKIVG 548
>gi|406685303|gb|AFS51092.1| phytochrome P, partial [Torreya jackii]
Length = 554
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/555 (69%), Positives = 446/555 (80%), Gaps = 25/555 (4%)
Query: 196 PSKSGDPALSLAGA--------VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTG 247
P + GD A ++ A V SQ+LAV A SRLQ++P GDIGLLCDTVVE+V++LTG
Sbjct: 1 PVRRGDAAALVSWAGGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELTG 60
Query: 248 YDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHA 307
YDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A
Sbjct: 61 YDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRA 120
Query: 308 IPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------- 359
PV V Q++ELKQPLCLV STLR+PHGCH QYM NMGSIASLVMAVI+N
Sbjct: 121 TPVKVKQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGIDEDGVSG 180
Query: 360 --------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNI 411
S+KLWGLVVCHHTSPR +PFPLR ACEFL+Q F LQ+ MELQ+A QL E +I
Sbjct: 181 SGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENSI 240
Query: 412 LRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAW 471
LRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGG WL+GVTPTE+QLKDIA
Sbjct: 241 LRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLKDIAD 300
Query: 472 WLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWG 531
WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARITSKDFLFWF SHTAKE+KWG
Sbjct: 301 WLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFGSHTAKEMKWG 360
Query: 532 GAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEE 591
GAKHHP+ KD+G +MHPRSSFKAFLEVVK RSFPWE E++AIHSLQ+++R SFQ++++
Sbjct: 361 GAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDIDDS 420
Query: 592 NDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELT 651
+K + + N K+QG+DELSSVA EMVRLIETATAPI VDSSG +NGWN KV ELT
Sbjct: 421 G-TKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNVKVGELT 479
Query: 652 GLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
GLP EAMGKSL+ ++V EES VE ++ AL GEE+KNVE+KLR F QKQ V+Y++
Sbjct: 480 GLPVGEAMGKSLVHDLVFEESIETVEKMLYHALRGEEEKNVEIKLRTFGPQKQKKVIYLV 539
Query: 712 VNACTSRDYKNNVKG 726
VNAC+SRDY + + G
Sbjct: 540 VNACSSRDYTDKIVG 554
>gi|406685345|gb|AFS51113.1| phytochrome P, partial [Cunninghamia lanceolata]
Length = 531
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/512 (73%), Positives = 432/512 (84%), Gaps = 11/512 (2%)
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQ+LAV A SRLQA+P GDIGLLCDTVVE+V++LTGYDRVM+Y H+D+HGEVV+EIRRS
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDTVVEEVRELTGYDRVMVYKLHEDEHGEVVAEIRRS 80
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS ELKQPLCLV STLR+
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVSVIQSVELKQPLCLVGSTLRA 140
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPFPL 381
PHGCH QYM NMGSIASLVMAVI+N + S+KLWGLVVCHHTSPR +PFPL
Sbjct: 141 PHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGGSGRSSVKLWGLVVCHHTSPRAVPFPL 200
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q F LQ+ MELQ+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDLV
Sbjct: 201 RSACEFLMQTFGLQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 260
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAALYYGGR WL+GVTPTE+Q+KDIA WLL H D TGLSTDSLA+AGYPGAA LG
Sbjct: 261 KCDGAALYYGGRFWLLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGD 320
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+ +MHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKR 380
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PWE E++AIHSLQ+++R SFQ++ +++D+K +++ N K+QG+DELSSVA EMV
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDI-DDSDTKTMVHSRLNDLKLQGIDELSSVASEMV 439
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETATAPI VDSSGT+NGWNAKVAELTGLP EAMGKSL+ ++V EES VE ++
Sbjct: 440 RLIETATAPILAVDSSGTVNGWNAKVAELTGLPVGEAMGKSLVHDLVFEESMETVEKMLY 499
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
AL GEEDKNVE+KLR F QKQ V+Y++VN
Sbjct: 500 HALRGEEDKNVEIKLRTFGPQKQKMVIYLVVN 531
>gi|371940272|dbj|BAL45573.1| truncate phytochrome A2 protein [Glycine max]
Length = 759
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/735 (52%), Positives = 519/735 (70%), Gaps = 25/735 (3%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ----ITAYLSKIQRGGLIQPFGC 98
DA L A FE+S +S + R + +GV + + TAYL +Q+G +IQPFGC
Sbjct: 27 TVDAKLHATFEESGSSFDYSSSVR-ISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPFGC 85
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LA++E T ++I YSEN EML + S + D G IG D +TLFT PS ++L KA
Sbjct: 86 LLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSASALQKA 144
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
E+ LLNP+L+H + KPFYAI+HR+ ++ID EP K + ++ AGA+QS K
Sbjct: 145 LGFAEVLLLNPVLIHCKTSG--KPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FH+DDHGEV++EI + LE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L STLR+PH
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 335 CHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLVMAV++N + +LWGLVVCH+T+PR++PFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ + E+++ Q+ EKNILRTQ LLCD+++RDAP IV++SP+IMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+ESQ+++IA+WL H D TG STDSL++AG+P A LG
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA R+T+KD +FWFRSHTA E++WGGAKH KD+G +MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVR 622
S PW+ EI+A+HSLQ+++R++F++ E + + NT+ + K++G+ EL +V E+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 623 LIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICR 682
LIETAT PI VD G +NGWN K+AELTGLP EAMGK L+ +V + S V+ ++
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLL-TLVEDSSTDRVKKMLNL 681
Query: 683 ALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMD 742
ALLGEE+KNV+ +++ + + ++VNAC SRD ++NV GVCFV DIT +K +MD
Sbjct: 682 ALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMD 741
Query: 743 KFIRLQGDYEAIIQS 757
KF R++GD + ++
Sbjct: 742 KFTRIEGDTRQLYRT 756
>gi|406685395|gb|AFS51138.1| phytochrome P, partial [Metasequoia glyptostroboides]
Length = 531
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/512 (72%), Positives = 432/512 (84%), Gaps = 11/512 (2%)
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRS
Sbjct: 21 SQRLAVRATSRLQAVPSGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++ELKQPLCLV STLR+
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRASPVRVIQAEELKQPLCLVGSTLRA 140
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPFPL 381
PHGCH QYM NMGSIASLVMAVI+N + S+KLWGLVVCHHTSPR +PFPL
Sbjct: 141 PHGCHAQYMANMGSIASLVMAVIVNGNGNGEEGGSGRSSVKLWGLVVCHHTSPRAVPFPL 200
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q F LQ+ MELQ+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDLV
Sbjct: 201 RSACEFLMQTFGLQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 260
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+ +MHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKR 380
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N ++QG+DELSSVA EMV
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDI-DDSDTKTMVHARLNDLRLQGIDELSSVASEMV 439
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETATAPI VDS G +NGWNAKVAELTGLP +EAMGKSL+ ++V EES VE ++
Sbjct: 440 RLIETATAPILAVDSGGIVNGWNAKVAELTGLPVAEAMGKSLVHDLVFEESMETVEKMLY 499
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
AL GEE+KNVE+KLR F QKQ V+Y++VN
Sbjct: 500 HALRGEEEKNVEIKLRTFGPQKQKMVIYLVVN 531
>gi|406685269|gb|AFS51075.1| phytochrome P, partial [Austrotaxus spicata]
Length = 546
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/532 (70%), Positives = 436/532 (81%), Gaps = 15/532 (2%)
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
+V SQ+LAV A SRLQA+ GDIGLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 16 SVPSQRLAVRATSRLQAVSSGDIGLLCDTVVEEVRELTGYDRVMVYEFHEDEHGEVVAEI 75
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++ELKQPLCLV ST
Sbjct: 76 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAEELKQPLCLVGST 135
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMK--------------LWGLVVCHHTSP 374
LR+PHGCH QYM NMGSIASLVMAVI+N + LWGLVVCHHTSP
Sbjct: 136 LRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGGGSGRSSRRLWGLVVCHHTSP 195
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R +PFPLR ACEFL+Q F LQ+ MELQ+A QL E NILRTQ LLCDMLLRDAP IVTQS
Sbjct: 196 RAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRTQTLLCDMLLRDAPIGIVTQS 255
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
PSIMDLVKCDGA LYYGG CWL+GVTP E+Q+KDIA WLL HGD TGLSTDSLA+AGYP
Sbjct: 256 PSIMDLVKCDGACLYYGGMCWLLGVTPMEAQIKDIADWLLECHGDSTGLSTDSLADAGYP 315
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GAA LG AVCGMA ARITSKDFLFWFRS+TAKE+KWGGAKHHP+ KD+G +MHPRSSFKA
Sbjct: 316 GAASLGDAVCGMAAARITSKDFLFWFRSNTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKA 375
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEVVK RS PWE E++AIHSLQ+++R SFQ++++ + +K + + N K+QG+DELS
Sbjct: 376 FLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSH-TKTMVHARLNDLKLQGIDELS 434
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETATAPI VD SG INGWNAKV ELTGLP EAMGKSL+ ++V ES
Sbjct: 435 SVASEMVRLIETATAPILAVDCSGIINGWNAKVGELTGLPVGEAMGKSLVHDLVLNESIE 494
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
VE ++ AL GEE+KNVE+KLR F QK V+Y++VNAC+SRDY +N+ G
Sbjct: 495 TVEKMLYHALRGEEEKNVEIKLRTFGPQKXKKVIYLVVNACSSRDYTDNIVG 546
>gi|406685407|gb|AFS51144.1| phytochrome P, partial [Sequoia sempervirens]
Length = 531
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/515 (72%), Positives = 431/515 (83%), Gaps = 11/515 (2%)
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+ SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 18 AMPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEI 77
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++ELKQPLCLV ST
Sbjct: 78 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRASPVRVIQAEELKQPLCLVGST 137
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIP 378
LR+PHGCH QYM NMGSIASLVMAVI+N + S+KLWGLVVCHHTSPR +
Sbjct: 138 LRAPHGCHSQYMANMGSIASLVMAVIVNGNGNDEEGASGRSSVKLWGLVVCHHTSPRAVS 197
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLR ACEFL+Q F LQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIM
Sbjct: 198 FPLRSACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIM 257
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA
Sbjct: 258 DLVKCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAAS 317
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEV
Sbjct: 318 LGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEV 377
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK RS PWE E++AIHSLQ+++R SFQ++++ + +K + + N K+QG+DELSSVA
Sbjct: 378 VKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSH-TKTMVHARLNDLKLQGIDELSSVAS 436
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETATAPI VDS G +NGWNAKVAELTGLP SEAMGKSL+ ++V EES VE
Sbjct: 437 EMVRLIETATAPILAVDSGGIVNGWNAKVAELTGLPVSEAMGKSLVHDLVFEESMETVEK 496
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
++ AL GEE+KNVE+KLR F KQ V+Y++ N
Sbjct: 497 MLYHALRGEEEKNVEIKLRTFGPXKQKMVIYLIAN 531
>gi|77963994|gb|ABB13338.1| phytochrome B [Hordeum vulgare subsp. spontaneum]
Length = 753
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/586 (63%), Positives = 463/586 (79%), Gaps = 3/586 (0%)
Query: 377 IPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPS 436
IPFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPS
Sbjct: 1 IPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPS 60
Query: 437 IMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGA 496
IMDLVKCDGAAL+Y G+ + +GVTPTE+Q+KDI WL HGD TGLSTDSLA+AGYPGA
Sbjct: 61 IMDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYPGA 120
Query: 497 ALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFL 556
LG AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFL
Sbjct: 121 TALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 180
Query: 557 EVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDEL 613
EVVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DEL
Sbjct: 181 EVVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGIDEL 240
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
SSVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSLI +++ +ES+
Sbjct: 241 SSVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKDLIFKESE 300
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
VE L+ +AL GEE NVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD
Sbjct: 301 EIVEKLLSQALRGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQD 360
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
IT +KV+MDKF+ +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AME +TGW R EV+
Sbjct: 361 ITGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMENLTGWSRGEVV 420
Query: 794 GKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASR 853
GK+L E+FGN CR+KG D LTKFMI L+ I GQ +E PF FF++ G++V+ LTA+
Sbjct: 421 GKLLVGEVFGNCCRLKGPDALTKFMIALHNAIGGQDSEKSPFSFFDKNGKYVQALLTANT 480
Query: 854 RTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFV 913
R+ +G+ IG FCF+QI P+LQ A E Q ++ YA++KELAYI QE+KNPL+GIRF
Sbjct: 481 RSKMDGETIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFT 540
Query: 914 HKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
+ LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 541 NSLLEMTDLKDDQRQFLETSAACEKQMSKIVKDASLQSIEDGSLVL 586
>gi|406685409|gb|AFS51145.1| phytochrome P, partial [Sequoiadendron giganteum]
Length = 531
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/512 (72%), Positives = 429/512 (83%), Gaps = 11/512 (2%)
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRS
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++ELKQPLCLV STLR+
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRASPVRVIQAEELKQPLCLVGSTLRA 140
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPFPL 381
PHGCH QYM NMGSIASL MAVI+N + S+KLWGLVVCHHTSPR +PFPL
Sbjct: 141 PHGCHAQYMANMGSIASLAMAVIVNGNGNDEEGASGRSSVKLWGLVVCHHTSPRAVPFPL 200
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q F LQ+ MELQ+A QL E NILRTQ LLCDMLLRDAP IV+QSPSIMDLV
Sbjct: 201 RSACEFLMQTFGLQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIVSQSPSIMDLV 260
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGA LG
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGATSLGD 320
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA ARITSKDFLFWFRSHT KE+KWGGAKHHP+ KD+ +MHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTVKEMKWGGAKHHPDDKDDSRRMHPRSSFKAFLEVVKR 380
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+DELSSVA EMV
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDI-DDSDTKTMVHARLNDLKLQGIDELSSVASEMV 439
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETATAPI VDS G +NGWNAKVAELTGLP +EAMGKSL+ ++V EES VE ++
Sbjct: 440 RLIETATAPILAVDSGGIVNGWNAKVAELTGLPVAEAMGKSLVHDLVFEESMETVEKMLH 499
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
AL GEE+KNVE+KLR F QKQ V+Y++VN
Sbjct: 500 HALRGEEEKNVEIKLRTFGPQKQKMVIYLIVN 531
>gi|406685413|gb|AFS51147.1| phytochrome P, partial [Taxodium distichum]
Length = 531
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/512 (71%), Positives = 429/512 (83%), Gaps = 11/512 (2%)
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRS
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++ELKQPLCLV STLR+
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRANPVRVIQAEELKQPLCLVGSTLRA 140
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPFPL 381
PHGCH QYM NMGSIASLVMAVI+N + ++KLWGLVVCHHTSPR +PFPL
Sbjct: 141 PHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGSSGRSAVKLWGLVVCHHTSPRAVPFPL 200
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q F LQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDLV
Sbjct: 201 RSACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 260
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAALYYGG+ WL+GVTPT +Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+ +MHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKR 380
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PWE E++AIHSLQ+++R SFQ++ +++++K + Q + K+QG+DELSSVA EMV
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDI-DDSETKTMVHVQLHDLKLQGIDELSSVASEMV 439
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETAT PI VDS+G +NGWNAK AELTGLP EAMGKSL+ ++V EES VE ++
Sbjct: 440 RLIETATVPILAVDSAGIVNGWNAKAAELTGLPVGEAMGKSLVHDLVFEESMETVEKMLY 499
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
AL GEEDKNVE+KLR F Q+Q V+Y++VN
Sbjct: 500 HALRGEEDKNVEIKLRTFGPQRQKKVIYLVVN 531
>gi|406685341|gb|AFS51111.1| phytochrome P, partial [Cryptomeria japonica]
Length = 529
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/512 (72%), Positives = 430/512 (83%), Gaps = 9/512 (1%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVR+ICDC A PV VIQ +ELKQPLCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRVICDCRANPVGVIQVEELKQPLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIIN--------SKDSMKLWGLVVCHHTSPRYIPFPL 381
R+PHGCH QYM NMGSIASLVMAVI+N S +KLWGLVVCHHTSPR +PFPL
Sbjct: 139 RAPHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGSSGRVKLWGLVVCHHTSPRAVPFPL 198
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q F LQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDLV
Sbjct: 199 RSACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 258
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAALYYGG+ WL+GVTPT +Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 KCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 318
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 378
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PWE E++AIHSLQ+++R SFQ++ +++++K + Q + K+QG+DELSSVA EMV
Sbjct: 379 RSLPWENVEMDAIHSLQLILRGSFQDI-DDSETKTMVHVQLHDLKLQGIDELSSVANEMV 437
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETATAPI VDS+G +NGWNAK AELTGLP EAMGKSL+ ++V EES VE ++
Sbjct: 438 RLIETATAPILAVDSAGIVNGWNAKAAELTGLPVGEAMGKSLVHDLVFEESMETVEKMLY 497
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
AL GEED+NVE+KLR F Q+Q V+Y++VN
Sbjct: 498 HALRGEEDRNVEIKLRTFGPQRQKKVIYLVVN 529
>gi|218683865|gb|ACL00887.1| phytochrome B [Cardamine concatenata]
Length = 544
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/544 (67%), Positives = 442/544 (81%), Gaps = 14/544 (2%)
Query: 182 ILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVED 241
ILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQ+LPGGDI LLCDTVVE
Sbjct: 1 ILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES 60
Query: 242 VQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRM 301
V+ LTGYDRVM+Y FH+D+HGEVV+E +R DL+PY G+H+PA DIPQA+RFLFKQNRVRM
Sbjct: 61 VRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLQPYFGLHYPATDIPQASRFLFKQNRVRM 120
Query: 302 ICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS---- 357
I DCHA PV+++Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 121 IVDCHATPVLLVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEE 180
Query: 358 -------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKN 410
++SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++EK
Sbjct: 181 GNNVGGGRNSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKR 240
Query: 411 ILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIA 470
+LRTQ LLCDMLLRD+P IVTQSPSIM+LVKCDGAA Y G+ +L+G++PTE+Q+KD+
Sbjct: 241 VLRTQTLLCDMLLRDSPAGIVTQSPSIMNLVKCDGAAFLYHGKYYLLGISPTEAQIKDVV 300
Query: 471 WWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKW 530
WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT++DFLFWFRSHT KE+KW
Sbjct: 301 EWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITNRDFLFWFRSHTEKEIKW 360
Query: 531 GGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE 590
GGAKHHPE KD+G +MHPR SF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E E
Sbjct: 361 GGAKHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEA 420
Query: 591 ENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKV 647
+SK Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNAK+
Sbjct: 421 AMNSKAAYGAVQPCRDMSGEQGLDELGAVAREMVRLIETATVPIFAVDAGGYINGWNAKI 480
Query: 648 AELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSV 707
AELTGL EAMGKSL+ +++++E++ V L+ RAL G+EDKNVE+KL+ F +
Sbjct: 481 AELTGLSVEEAMGKSLVSDLIYKENEEIVIKLLSRALRGDEDKNVEVKLKTFRPELHGKA 540
Query: 708 VYIL 711
V+++
Sbjct: 541 VFMV 544
>gi|406685367|gb|AFS51124.1| phytochrome P, partial [Glyptostrobus pensilis]
Length = 531
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/512 (71%), Positives = 427/512 (83%), Gaps = 11/512 (2%)
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HG VV+EIRRS
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGGVVAEIRRS 80
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++ELKQPLCLV STLR+
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRANPVRVIQAEELKQPLCLVGSTLRA 140
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPFPL 381
PHGCH QYM NMGSIASLVMAVI+N + ++KLWGLVVCHHTSPR +PFPL
Sbjct: 141 PHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGSSGRSAVKLWGLVVCHHTSPRAVPFPL 200
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q F LQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDLV
Sbjct: 201 RSACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 260
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAALYYGG+ WL+GVTPT +Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+ +MHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKR 380
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PWE E++ IHSLQ+++R SFQ++ +++++K + Q + K+QG+DELSSVA EMV
Sbjct: 381 RSLPWENVEMDTIHSLQLILRGSFQDI-DDSETKTMVHVQLHDLKLQGIDELSSVASEMV 439
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETAT PI VDS+G +NGWNAK AELTGLPA EAMGKSL+ ++V EES VE ++
Sbjct: 440 RLIETATVPILAVDSAGIVNGWNAKAAELTGLPAGEAMGKSLVHDLVFEESMETVEKMLY 499
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVN 713
AL GEEDKNVE+KLR F Q+Q +Y++VN
Sbjct: 500 HALRGEEDKNVEIKLRTFGPQRQKKGIYLVVN 531
>gi|406685423|gb|AFS51152.1| phytochrome P, partial [Thuja standishii]
Length = 530
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/512 (71%), Positives = 426/512 (83%), Gaps = 11/512 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++ELKQPLCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAEELKQPLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPF 379
R+PHGCH QYM NMGSIASL MAVI+N + ++KLWGLVVCHHTSPR +PF
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGNGKDEGGSSGRSAVKLWGLVVCHHTSPRAVPF 198
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLR ACEFL+Q FSLQ+ ME+Q+A+QL E NILRTQ LLCDMLLRDAP IVTQSPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAVQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMD 258
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYYGG+ WL+GVTPT +Q+KDIA WLL GD TGLSTDSLA+AGYPGAA L
Sbjct: 259 LVKCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYQGDSTGLSTDSLADAGYPGAASL 318
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA ARITSKDFLFWFRSHTA E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 378
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
K RS PWE E++AIHSLQ+++R SFQ++ + +++K + + + K+QG+DELSSVACE
Sbjct: 379 KRRSLPWENIEMDAIHSLQLILRGSFQDI-DNSENKTMVHARMSDLKLQGMDELSSVACE 437
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRLIETA API VDS+G +NGWN+ AELTGLPA EAMGKS + ++V EES VE +
Sbjct: 438 MVRLIETAHAPILAVDSAGIVNGWNSYAAELTGLPAEEAMGKSFVHDLVFEESIETVEKM 497
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
+ AL GEEDKNVE+KLR F LQ Q V+ ++
Sbjct: 498 LDNALRGEEDKNVEIKLRTFGLQMQKEVILVV 529
>gi|400480|emb|CAA52883.1| phytochrome [Psilotum nudum]
Length = 794
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/626 (58%), Positives = 470/626 (75%), Gaps = 15/626 (2%)
Query: 344 GSIASLVMAVIINSKDS-----------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAF 392
GSI SLVMAVI+N D+ +LWG+VVCHHT+PR +PF LR ACEFL+Q F
Sbjct: 1 GSIGSLVMAVIVNDNDAEPSGRGNQPKNRRLWGMVVCHHTTPRAVPFSLRSACEFLMQVF 60
Query: 393 SLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGG 452
LQL ME+++A Q+ EK+ILRTQ LLCDMLLRDAP IVTQSP+IMDLVKCDGAALYYG
Sbjct: 61 GLQLNMEIELAAQMREKHILRTQTLLCDMLLRDAPIGIVTQSPNIMDLVKCDGAALYYGK 120
Query: 453 RCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARIT 512
+ WL+G TPTE+Q+KD+A WLL+ H D TGLST+SLA+AG+PGAA LG AVCGMA +IT
Sbjct: 121 KFWLLGTTPTEAQIKDLADWLLDVHRDSTGLSTESLADAGFPGAAALGDAVCGMAAVKIT 180
Query: 513 SKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEIN 572
+D+LFWFRSHTAKE+KWGGAKH+P+ KD+G KMHPRSSFKAFLEVVK RS PWE E++
Sbjct: 181 PRDYLFWFRSHTAKEIKWGGAKHNPDDKDDGKKMHPRSSFKAFLEVVKWRSSPWEDVEMD 240
Query: 573 AIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIF 632
A+HSLQ+++R SFQ++ ++++SK + + N + G+DELS+VA EMVRL+ETATAPI
Sbjct: 241 AVHSLQLILRGSFQDI-DDSESKTMIHHRLNDLNLHGMDELSTVANEMVRLMETATAPIL 299
Query: 633 GVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNV 692
VDSSG INGWN K AELTGLP +AM KSL+ ++V +ES VE L+ AL GEE++NV
Sbjct: 300 AVDSSGFINGWNGKAAELTGLPLEDAMNKSLVRDLVVDESVSTVERLLYLALQGEEERNV 359
Query: 693 ELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYE 752
E+KL+ F Q V ++VNAC SR+ NV GVCFVGQD+T EKV+MDKF R+QGDY
Sbjct: 360 EIKLKTFGTQADKGPVILVVNACASRNITANVVGVCFVGQDVTGEKVVMDKFTRIQGDYR 419
Query: 753 AIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMK 809
I+QS NPLIPPIF SDE CSEWN AM K++GW EV+GKM EIFG+ CR++
Sbjct: 420 TIVQSPNPLIPPIFGSDEFGYCSEWNPAMVKLSGWKMEEVLGKMNVGEIFGSEMACCRLR 479
Query: 810 GQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQ 869
GQD +TKFMI+L + GQ ++ FP GFF+RQG++VE L A++RTD G + G FCF+
Sbjct: 480 GQDAMTKFMIVLNSAMGGQDSDRFPLGFFDRQGKYVEALLIANKRTDGAGAITGVFCFLH 539
Query: 870 ILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQY 929
I ++Q AL+ Q K+KE+AY+RQE++NPL GI F +LLE +++SE Q+Q
Sbjct: 540 IASAEVQQALQVQKRSARTALDKLKEVAYMRQEIRNPLYGIMFTRRLLEGTNLSEEQKQI 599
Query: 930 LETSDACERQIMTIIDGMDLRCIEEG 955
++TS CE+Q+ I+D + ++ G
Sbjct: 600 IDTSAVCEKQLHQILDEDNFENLDHG 625
>gi|406685425|gb|AFS51153.1| phytochrome P, partial [Thuja sutchuenensis]
Length = 530
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/512 (70%), Positives = 425/512 (83%), Gaps = 11/512 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++ELKQPLCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAEELKQPLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPF 379
R+PHGCH QYM NMGSIASL MAVI+N + ++KLWGLVVCHHTSPR +PF
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGNGKDEGGSSGRSAVKLWGLVVCHHTSPRAVPF 198
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLR ACEFL+Q FSLQ+ ME+Q+A+QL E NILRTQ LLCDMLLRDAP IVTQSPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAVQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMD 258
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYYGG+ WL+GVTPT +Q+KDIA WLL GD TGLSTDSLA+AGYPGAA L
Sbjct: 259 LVKCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYQGDSTGLSTDSLADAGYPGAASL 318
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA ARITSKDFLFWFRSHTA E+KWGGAKHHP+ KD+G +MHPRSSFKA LEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKASLEVV 378
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
K RS PWE E++AIHSLQ+++R SFQ++ + +++K + + + K+QG+DELSSVACE
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDI-DNSENKTMVHARMSDLKLQGMDELSSVACE 437
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRLIETA API VDS+G +NGWN+ AELTGLPA EAMGKS + ++V EES VE +
Sbjct: 438 MVRLIETAHAPILAVDSAGIVNGWNSYAAELTGLPAEEAMGKSFVHDLVFEESIETVEKM 497
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
+ AL GEEDKNVE+KLR F LQ Q V+ ++
Sbjct: 498 LDNALRGEEDKNVEIKLRTFGLQMQKEVILVV 529
>gi|406685419|gb|AFS51150.1| phytochrome P, partial [Thuja occidentalis]
Length = 530
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/513 (70%), Positives = 428/513 (83%), Gaps = 11/513 (2%)
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
+V SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EI
Sbjct: 18 SVPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEI 77
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
RRSDLEPYLG+H+PA DIPQA+RFLF QNRVR+ICDC A PV VIQ++ELKQPLCLV ST
Sbjct: 78 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRVICDCRATPVRVIQAEELKQPLCLVGST 137
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIP 378
LR+PHGCH QYM NMGSIASL MAVI+N + ++KLWGLVVCHHTSPR +P
Sbjct: 138 LRAPHGCHAQYMANMGSIASLAMAVIVNGNGKDEGGSSGRSAVKLWGLVVCHHTSPRAVP 197
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLR ACEFL+Q FSLQ+ ME+Q+A+QL E NILRTQ LLCDMLLRDAP IV+QSPSIM
Sbjct: 198 FPLRSACEFLMQTFSLQINMEMQLAVQLTENNILRTQTLLCDMLLRDAPIGIVSQSPSIM 257
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDGAALYYGG+ W++GVTPT +Q+KDIA WLL GD TGLSTDSLA+AGYPGAA
Sbjct: 258 DLVKCDGAALYYGGKFWMLGVTPTGAQIKDIADWLLEYQGDSTGLSTDSLADAGYPGAAS 317
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEV 558
L A+CGMA ARITSKDFLFWFRSHTA E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEV
Sbjct: 318 LRDAICGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEV 377
Query: 559 VKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVAC 618
VK RS PWE E++AIHSLQ+++R SFQ++ +++++K + + + K+QG+DELSSVAC
Sbjct: 378 VKRRSLPWENVEMDAIHSLQLILRGSFQDI-DDSENKTMVHARMSDLKLQGMDELSSVAC 436
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVRLIETA API VDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES VE
Sbjct: 437 EMVRLIETAHAPILAVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVFEESIETVEK 496
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
++ AL GEEDKNVE+KLR F LQ Q V+ ++
Sbjct: 497 MLDNALRGEEDKNVEIKLRTFGLQMQKEVILVV 529
>gi|406685417|gb|AFS51149.1| phytochrome P, partial [Tetraclinis articulata]
Length = 530
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/513 (70%), Positives = 427/513 (83%), Gaps = 13/513 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMICDC A PV +IQ++EL QPLCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMICDCRAAPVSIIQAEELPQPLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPF 379
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PF
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNANGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPF 198
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQMAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMD 258
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+A YPGAA L
Sbjct: 259 LVKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADARYPGAASL 318
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSF+AFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFQAFLEVV 378
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKMQGVDELSSVAC 618
K RSFPW+ E++AIHSLQ+++R SF+++++ EN + V + Q N K+QG+DEL+S AC
Sbjct: 379 KRRSFPWDNVEMDAIHSLQLILRGSFKDIDDCENKTMV--HAQMNDLKLQGMDELNSAAC 436
Query: 619 EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVEN 678
EMVR+IETA API GVDS G +NGWN+ AELTGLPA EAMGKSL+ +++ EES V
Sbjct: 437 EMVRVIETAHAPILGVDSDGIVNGWNSYAAELTGLPAEEAMGKSLVHDLIVEESIETVAK 496
Query: 679 LICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
++ AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 497 MLYNALRGEEDKNVEIKLRTFAPQTQKEVILVV 529
>gi|406685421|gb|AFS51151.1| phytochrome P, partial [Thuja plicata]
Length = 530
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/512 (70%), Positives = 425/512 (83%), Gaps = 11/512 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDL PYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++ELKQPLCLV STL
Sbjct: 79 RSDLGPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAEELKQPLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPF 379
R+PHGCH QYM NMGSIASL MAVI+N + ++KLWGLVVCHHTSPR +PF
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGNGKDEGGSSGRSAVKLWGLVVCHHTSPRAVPF 198
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLR ACEFL+Q FSLQ+ ME+Q+A+QLAE NILRTQ LLCDMLLRDAP IVTQSPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAVQLAENNILRTQTLLCDMLLRDAPIGIVTQSPSIMD 258
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYYGG+ WL+GVTPT +Q+KDIA WLL GD TGLSTDSLA+AGYPGAA L
Sbjct: 259 LVKCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYQGDSTGLSTDSLADAGYPGAASL 318
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA ARITSKDFLFWFRSHTA E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 378
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
K RS PW+ E++AIHSLQ+++R SFQ++ + +++K + + + K+QG+D LSSVACE
Sbjct: 379 KRRSLPWDNVEMDAIHSLQLILRGSFQDI-DNSENKTMVHARMSDLKLQGMDGLSSVACE 437
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRLIETA API VDS+G +NGWN+ AELTGLPA EAMGKS + ++V EES VE +
Sbjct: 438 MVRLIETAHAPILAVDSAGIVNGWNSYAAELTGLPAEEAMGKSFVHDLVFEESIETVEKM 497
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
+ AL GEEDKNVE+KLR F LQ Q V+ ++
Sbjct: 498 LDNALRGEEDKNVEIKLRTFGLQMQKEVILVV 529
>gi|406685427|gb|AFS51154.1| phytochrome P, partial [Thujopsis dolabrata]
Length = 530
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/510 (70%), Positives = 422/510 (82%), Gaps = 11/510 (2%)
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRS
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++EL QPLCLV STLR+
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAEELNQPLCLVGSTLRA 140
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPFPL 381
PHGCH QYM NMGSIASL MAVI+N + + KLWGLVVCHHT+PR +PFPL
Sbjct: 141 PHGCHAQYMANMGSIASLAMAVIVNGNGKDEGGSSGRSAAKLWGLVVCHHTAPRAVPFPL 200
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IV QSPSIMDLV
Sbjct: 201 RSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVIQSPSIMDLV 260
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAALYYGG+ WL+GVTPT +Q+KDIA WLL GD TGLSTDSLA+AGYPGAA LG
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYQGDSTGLSTDSLADAGYPGAASLGD 320
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA ARITSKDFLFWFRSHTA E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 380
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PWE E++AIHSLQ+++R SFQ++ +++++K + + + K+QG+DELSSVACEMV
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDI-DDSENKTMVHARMSDLKLQGMDELSSVACEMV 439
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETA API VDS+G +NGWN+ AELTGLPA EAMGKS + ++V EES VE ++
Sbjct: 440 RLIETAHAPILAVDSAGIVNGWNSYAAELTGLPAEEAMGKSFVHDLVFEESIETVEKMLY 499
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F L+ Q V+ ++
Sbjct: 500 NALRGEEDKNVEIKLRTFGLEMQKEVILVV 529
>gi|406685365|gb|AFS51123.1| phytochrome P, partial [Fokienia hodginsii]
Length = 530
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/512 (69%), Positives = 425/512 (83%), Gaps = 11/512 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+DDHGEVV+EIR
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDDHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC A PV +IQ++EL QPLCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRATPVKIIQAEELDQPLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPF 379
R+PHGCH QYM NMGSIASL MAVI+N + + KLWGLVVCHHTSPR +PF
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGIGNDEGGSSGRSAGKLWGLVVCHHTSPRAVPF 198
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVT+SPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTRSPSIMD 258
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYYGG+ WL+ VTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA L
Sbjct: 259 LVKCDGAALYYGGKFWLLEVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASL 318
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA ARITSKDFLFWFRSHTA E+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 378
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
K RS PWE E++AIHSLQ+++R SFQ++ +++++K + + + ++QG+DELSSVACE
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDI-DDSENKTMVHARMSDLRLQGMDELSSVACE 437
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRLIETA API VD++G +NGWN+ AELTGLPA EAMGKSL+ ++V +ES VE +
Sbjct: 438 MVRLIETAHAPILAVDAAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVFDESIETVEKM 497
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
+ AL GEEDK+VE+KLR F Q Q V+ ++
Sbjct: 498 LYNALRGEEDKSVEIKLRTFGPQMQKEVILVV 529
>gi|406685319|gb|AFS51100.1| phytochrome P, partial [Hesperocyparis bakeri]
gi|406685323|gb|AFS51102.1| phytochrome P, partial [Hesperocyparis goveniana]
gi|406685327|gb|AFS51104.1| phytochrome P, partial [Hesperocyparis macrocarpa]
Length = 528
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/514 (69%), Positives = 426/514 (82%), Gaps = 11/514 (2%)
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
GAV SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEV++
Sbjct: 16 GGAVPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLA 75
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
EIRRSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV
Sbjct: 76 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVG 135
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYI 377
STLR+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +
Sbjct: 136 STLRAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAV 195
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSI
Sbjct: 196 PFPLRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSI 255
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYYGG+ WL+G+TPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA
Sbjct: 256 MDLVKCDGAALYYGGKFWLIGITPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAA 315
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G KMHPRSSFKAFLE
Sbjct: 316 FLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRKMHPRSSFKAFLE 375
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVA 617
VVK RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S A
Sbjct: 376 VVKRRSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTMVHAQMNDLKLQG-DELNSAA 433
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
CEMVR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V
Sbjct: 434 CEMVRVIETAHAPILGVDSTGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVA 493
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
++ AL GEEDKNVE+KLR F Q Q ++ ++
Sbjct: 494 KMLYNALRGEEDKNVEIKLRTFGSQMQKEIILVV 527
>gi|406685347|gb|AFS51114.1| phytochrome P, partial [Hesperocyparis arizonica]
Length = 528
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/514 (69%), Positives = 425/514 (82%), Gaps = 11/514 (2%)
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
GAV SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEV++
Sbjct: 16 GGAVPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLA 75
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
EIRRSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV
Sbjct: 76 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVG 135
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYI 377
STLR+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +
Sbjct: 136 STLRAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAV 195
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSI
Sbjct: 196 PFPLRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSI 255
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYYGG+ WL+G+TPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA
Sbjct: 256 MDLVKCDGAALYYGGKFWLIGITPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAA 315
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G KMHPRSSFKAFLE
Sbjct: 316 FLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRKMHPRSSFKAFLE 375
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVA 617
VVK RS PW+ E+ AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S A
Sbjct: 376 VVKRRSLPWDNVEMGAIHSLQLILRGSFKDI-DDSENKTMVHAQMNDLKLQG-DELNSAA 433
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
CEMVR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V
Sbjct: 434 CEMVRVIETAHAPILGVDSTGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVA 493
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
++ AL GEEDKNVE+KLR F Q Q ++ ++
Sbjct: 494 KMLYNALRGEEDKNVEIKLRTFGSQMQKEIILVV 527
>gi|406685411|gb|AFS51146.1| phytochrome P, partial [Taiwania cryptomerioides]
Length = 509
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/492 (73%), Positives = 415/492 (84%), Gaps = 11/492 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQ+LAV A SRLQA+P GDIGLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQ++ELKQPLCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRASPVRVIQAEELKQPLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPF 379
R+PHGCH QYM NMGSIASLVMAVI+N + S+KLWGLVVCHHTSPR + F
Sbjct: 139 RAPHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGGSGRSSVKLWGLVVCHHTSPRAVSF 198
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLR ACEFL+Q F Q+ MELQ+A QL E NILRTQ LLCDMLLRDAP I TQSPSIMD
Sbjct: 199 PLRSACEFLMQTFGPQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIATQSPSIMD 258
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL H D TGLSTDSLA+AGYPGAA L
Sbjct: 259 LVKCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASL 318
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 378
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
K RS PWE E++AIHSLQ+++R SFQ++ +++D+K +++ N K+QG+DELSSVA E
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDI-DDSDTKTMVHSRLNDLKLQGIDELSSVASE 437
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRLIETATAPI +DS+G +NGWNAKVAELTGLP EAMGKSL+ ++V EES VE +
Sbjct: 438 MVRLIETATAPILAIDSAGIVNGWNAKVAELTGLPVGEAMGKSLVHDLVFEESMETVEKM 497
Query: 680 ICRALLGEEDKN 691
+ AL GEEDKN
Sbjct: 498 LYHALRGEEDKN 509
>gi|406685339|gb|AFS51110.1| phytochrome P, partial [Chamaecyparis obtusa]
Length = 530
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/512 (69%), Positives = 424/512 (82%), Gaps = 11/512 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y F +DDHGEVV+EIR
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFREDDHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC A PV +IQ++EL QPLCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRAPPVRIIQAEELDQPLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPF 379
R+PHGCH QYM NMGSIASL MAVI+N + + KLWGLVVCHHTSPR +PF
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGIGNDEGGSSGRSAGKLWGLVVCHHTSPRAVPF 198
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVT+SPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTRSPSIMD 258
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYYGG+ WL+ VTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA L
Sbjct: 259 LVKCDGAALYYGGKFWLLEVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASL 318
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA ARITSKDFLFWFRSHT KE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTGKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 378
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
K RS PWE E++AIHSLQ+++R SFQ++ +++++K + + + ++QG+DELSSVACE
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDI-DDSENKTMVHARMSDLRLQGMDELSSVACE 437
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRLIETA API VD++G +NGWN+ AELTGLPA EAMGKSL+ ++V +ES VE +
Sbjct: 438 MVRLIETAHAPILAVDAAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVFDESIETVEKM 497
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
+ AL GEEDK+VE+KLR F Q Q V+ ++
Sbjct: 498 LYNALRGEEDKSVEIKLRTFGPQMQKEVILVV 529
>gi|406685321|gb|AFS51101.1| phytochrome P, partial [Hesperocyparis benthamii]
Length = 528
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/514 (69%), Positives = 426/514 (82%), Gaps = 11/514 (2%)
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
GA+ SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEV++
Sbjct: 16 GGALPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLA 75
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
EIRRSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV
Sbjct: 76 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVG 135
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYI 377
STLR+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +
Sbjct: 136 STLRAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAV 195
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSI
Sbjct: 196 PFPLRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSI 255
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYYGG+ WL+G+TPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA
Sbjct: 256 MDLVKCDGAALYYGGKFWLIGITPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAA 315
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G KMHPRSSFKAFLE
Sbjct: 316 FLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRKMHPRSSFKAFLE 375
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVA 617
VVK RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S A
Sbjct: 376 VVKRRSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTMVHAQMNDLKLQG-DELNSAA 433
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
CEMVR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V
Sbjct: 434 CEMVRVIETAHAPILGVDSTGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVA 493
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
++ AL GEEDKNVE+KLR F Q Q ++ ++
Sbjct: 494 KMLYNALRGEEDKNVEIKLRTFGSQMQKEIILVV 527
>gi|406685325|gb|AFS51103.1| phytochrome P, partial [Hesperocyparis lusitanica]
Length = 528
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/514 (69%), Positives = 425/514 (82%), Gaps = 11/514 (2%)
Query: 207 AGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVS 266
GAV SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEV++
Sbjct: 16 GGAVPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLA 75
Query: 267 EIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVN 326
EIRRSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV
Sbjct: 76 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVG 135
Query: 327 STLRSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYI 377
STLR+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +
Sbjct: 136 STLRAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAV 195
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCD LLRDAP IVTQSPSI
Sbjct: 196 PFPLRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDTLLRDAPIGIVTQSPSI 255
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYYGG+ WL+G+TPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA
Sbjct: 256 MDLVKCDGAALYYGGKFWLIGITPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAA 315
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G KMHPRSSFKAFLE
Sbjct: 316 FLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRKMHPRSSFKAFLE 375
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVA 617
VVK RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S A
Sbjct: 376 VVKRRSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTMVHAQMNDLKLQG-DELNSAA 433
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
CEMVR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V
Sbjct: 434 CEMVRVIETAHAPILGVDSTGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVA 493
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
++ AL GEEDKNVE+KLR F Q Q ++ ++
Sbjct: 494 KMLYNALRGEEDKNVEIKLRTFGSQMQKEIILVV 527
>gi|406685337|gb|AFS51109.1| phytochrome P, partial [Chamaecyparis lawsoniana]
Length = 530
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/512 (69%), Positives = 423/512 (82%), Gaps = 11/512 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+DDHGEVV+EIR
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDDHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC A PV +IQ++EL QPLCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRAPPVRIIQAEELDQPLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPF 379
R+PHG H QYM NMGSIASL MAVI+N + + KLWGLVVCHHTSPR +PF
Sbjct: 139 RAPHGYHAQYMANMGSIASLAMAVIVNGIGNDEGGSSGRSAGKLWGLVVCHHTSPRAVPF 198
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVT+SPSIMD
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTRSPSIMD 258
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYYGG+ WL+ VTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA L
Sbjct: 259 LVKCDGAALYYGGKFWLLEVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASL 318
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA ARITSKDFLFWFRSHTA E+KWGGAKHHP+ KD+G +MHPRSSF AFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFXAFLEVV 378
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
K RS PWE E++AIHSLQ+++R SFQ++ +++++K + + + ++QG+DELSSVACE
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDI-DDSENKTMVHARMSDLRLQGMDELSSVACE 437
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVRLIETA API VD++G +NGWN+ AELTGLPA EAMGKSL+ ++V +ES VE +
Sbjct: 438 MVRLIETAHAPILAVDAAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVFDESIETVEKM 497
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
+ AL GEEDK+VE+KLR F Q Q V+ ++
Sbjct: 498 LYNALRGEEDKSVEIKLRTFGPQMQKEVILVV 529
>gi|406685355|gb|AFS51118.1| phytochrome P, partial [Callitropsis funebris]
Length = 528
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/511 (70%), Positives = 424/511 (82%), Gaps = 11/511 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEV++EIR
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTVVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESVETVAKML 496
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 497 YNALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685351|gb|AFS51116.1| phytochrome P, partial [Cupressus duclouxiana]
gi|406685359|gb|AFS51120.1| phytochrome P, partial [Cupressus torulosa]
Length = 528
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/511 (70%), Positives = 424/511 (82%), Gaps = 11/511 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEV++EIR
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTVVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESVETVAKML 496
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 497 YNALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685335|gb|AFS51108.1| phytochrome P, partial [Calocedrus macrolepis]
Length = 529
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/510 (70%), Positives = 421/510 (82%), Gaps = 12/510 (2%)
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRS
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC PV +IQ+ EL Q LCLV STLR+
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRDAPVSIIQADELPQRLCLVGSTLRA 140
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPFPL 381
PHGCH QYM NMGSIASL MAVI+N +++ KLWGLVVCHHTSPR +PFPL
Sbjct: 141 PHGCHAQYMANMGSIASLAMAVIVNGNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFPL 200
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDLV
Sbjct: 201 RSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 260
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 261 KCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 380
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S ACEMV
Sbjct: 381 RSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTMVHAQMNDLKLQG-DELNSAACEMV 438
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
R+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 439 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLY 498
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 499 NALRGEEDKNVEMKLRTFGPQMQKEVILVV 528
>gi|406685357|gb|AFS51119.1| phytochrome P, partial [Cupressus sempervirens]
Length = 528
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/511 (70%), Positives = 423/511 (82%), Gaps = 11/511 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM Y FH+D+HGEV++EIR
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMAYKFHEDEHGEVLAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTVVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESVETVAKML 496
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 497 YNALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685397|gb|AFS51139.1| phytochrome P, partial [Microbiota decussata]
Length = 529
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/512 (69%), Positives = 425/512 (83%), Gaps = 12/512 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMICDC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMICDCRAAPVSIIQAEELPQRLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPF 379
R+PHGCH QYM NMGSIASL MAVI+N +++ KLWGLVVCHHTSPR +PF
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGNVNDEVGSSGRNTGKLWGLVVCHHTSPRAVPF 198
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLR ACEFL+Q FSLQ+ ME+Q+A QL E++ILRTQ LLCDMLLRDAP IVTQSPSIM+
Sbjct: 199 PLRSACEFLMQTFSLQINMEMQLAAQLTEQHILRTQTLLCDMLLRDAPIGIVTQSPSIMN 258
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL H D TGLSTDSLA+AGYPGAA L
Sbjct: 259 LVKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASL 318
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVV 378
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACE 619
K RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S ACE
Sbjct: 379 KRRSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTMVHAQMNDLKLQG-DELNSAACE 436
Query: 620 MVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENL 679
MVR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V +
Sbjct: 437 MVRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLLHDLVLEESIETVAKM 496
Query: 680 ICRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
+ AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 497 LYNALRGEEDKNVEIKLRTFGPQMQKEVILVV 528
>gi|406685375|gb|AFS51128.1| phytochrome P, partial [Juniperus drupacea]
Length = 528
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/511 (70%), Positives = 421/511 (82%), Gaps = 11/511 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYG + WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++++ + K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKN-KTMVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKML 496
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 497 YNALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685405|gb|AFS51143.1| phytochrome P, partial [Platycladus orientalis]
Length = 529
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/510 (69%), Positives = 423/510 (82%), Gaps = 12/510 (2%)
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRS
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF QN+VRMICDC A PV +IQ++EL Q LCLV STLR+
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNKVRMICDCRAAPVSIIQAEELSQSLCLVGSTLRA 140
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPFPL 381
PHGCH QYM NMGSIASL MAVI+N +++ KLWGLVVCHHTSPR +PFPL
Sbjct: 141 PHGCHAQYMANMGSIASLAMAVIVNGNVNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFPL 200
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q FSLQ+ ME+Q+A QL E++ILRTQ LLCDMLLRDAP IVTQSPSIM+LV
Sbjct: 201 RSACEFLMQTFSLQINMEMQLAAQLTEQHILRTQTLLCDMLLRDAPIGIVTQSPSIMNLV 260
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL H D TGLSTDSLA+AGYPGAA LG
Sbjct: 261 KCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGD 320
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCG A ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 321 AVCGRAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 380
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S ACEMV
Sbjct: 381 RSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTMVHAQMNDLKLQG-DELNSAACEMV 438
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
R+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 439 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESFETVAKMLY 498
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 499 NALRGEEDKNVEIKLRTFGPQTQKEVILVV 528
>gi|406685387|gb|AFS51134.1| phytochrome P, partial [Juniperus virginiana]
Length = 528
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/511 (69%), Positives = 421/511 (82%), Gaps = 11/511 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQK+AV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQKVAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYG + WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++++ + K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKN-KTMVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKML 496
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 497 YNALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685331|gb|AFS51106.1| phytochrome P, partial [Callitropsis vietnamensis]
Length = 528
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/511 (69%), Positives = 422/511 (82%), Gaps = 11/511 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEV++EIR
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYGG+ WL+G+TPTE+Q+KDIA WLL HGD TGLSTDS+A+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGGKFWLIGITPTEAQIKDIADWLLEYHGDSTGLSTDSIADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++++ + K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKN-KTMVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES + ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETLAKML 496
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q ++ ++
Sbjct: 497 YNALRGEEDKNVEIKLRTFGPQMQKEIILVV 527
>gi|406685353|gb|AFS51117.1| phytochrome P, partial [Cupressus dupreziana]
Length = 528
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/511 (69%), Positives = 423/511 (82%), Gaps = 11/511 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEV++EIR
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSI+DL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSILDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGM ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMTAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTVVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESVETVAKML 496
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 497 YNALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|156752869|gb|ABU94180.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/606 (59%), Positives = 449/606 (74%), Gaps = 17/606 (2%)
Query: 292 FLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVM 351
FLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMGSIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 352 AVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYME 399
AV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F +QL E
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 400 LQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGV 459
+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY WL+GV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 460 TPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFW 519
TPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI SKDFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 520 FRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQI 579
FRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++AIHSLQ+
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 580 VMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGT 639
++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI VD+ G
Sbjct: 301 ILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGV 359
Query: 640 INGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKF 699
+NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV+++L++
Sbjct: 360 VNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNVQIELKRH 418
Query: 700 ELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVN 759
++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY AI+Q+ +
Sbjct: 419 GSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPS 478
Query: 760 PLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMKGQDMLTK 816
PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+KGQ+ LT+
Sbjct: 479 PLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQ 538
Query: 817 FMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQ 876
I+L +TGQGTE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+ I P+LQ
Sbjct: 539 LRIILNSSMTGQGTEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQ 598
Query: 877 PALEAQ 882
AL Q
Sbjct: 599 QALYVQ 604
>gi|37779202|gb|AAO86643.1| PHYA2 photoreceptor [Stellaria longipes]
Length = 935
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/718 (52%), Positives = 491/718 (68%), Gaps = 32/718 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGV-----PEEQITAYLSKIQRGGL 92
II DA L AEFE+S F+YS SV GV ++ ++YL +IQ+G
Sbjct: 22 IIAQTIQDAKLHAEFEES---SNEFDYSSSVRGSTSGVNQLPKSDKVTSSYLLQIQKGKF 78
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGC+LA+++ TFR+I +SEN EML + S + D + G IG D RT+FT PS
Sbjct: 79 IQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDLPVIG-IGTDIRTIFTGPSA 137
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
++L KA ++SLLNPILVH ++ KPFYAI+HR+ +VID EP K + ++ AG
Sbjct: 138 SALQKALGFTDVSLLNPILVHC--KNPGKPFYAIVHRVTRSLVIDFEPVKPYEVPMTAAG 195
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AI+RLQ+LP G++ L DT+V++V +LTGYDRVM Y FHDDDHGEVVSE+
Sbjct: 196 ALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEV 255
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ +L+ YLG+H+PA DIPQAARFLF +N+VR+ICDC A V V+Q ++L L L ST
Sbjct: 256 TKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRVVQDEKLSVDLTLCGST 315
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPR 375
LR+PHGCH QYM NM SI SLVMAV++N +D +LWGLVVCHHTSPR
Sbjct: 316 LRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHKRKRLWGLVVCHHTSPR 375
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q EK ILRTQ LLCDML+RDAP IVTQSP
Sbjct: 376 FVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLLCDMLMRDAPLGIVTQSP 435
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVKCDGAAL Y + W +G+TPT+ QL++I WL +H D TGLSTDSL +AGYP
Sbjct: 436 NIMDLVKCDGAALLYNNKVWRLGITPTDYQLQEIGGWLSRDHMDSTGLSTDSLYDAGYPA 495
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG +VCGMA RIT D LFWFRSHTA E+KWGGAKH KD+G KMHPRSSFKAF
Sbjct: 496 ALELGDSVCGMAAVRITVNDMLFWFRSHTAAEIKWGGAKHEAGEKDDGSKMHPRSSFKAF 555
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +++ + ++ G+ EL +
Sbjct: 556 LEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDGEAADLNTSVIHSKISDLQISGLKELEA 615
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PIF VDS G +NGWN K+ ELTG+P EA+GK I +V + S
Sbjct: 616 VTSEMVRLIETATVPIFAVDSDGLVNGWNTKIYELTGIPVEEAVGKH-IAALVEDSSIDN 674
Query: 676 VENLICRAL-LGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQ 732
V+ ++ AL L D L +++ Q +L A R KN + G+ F G+
Sbjct: 675 VKQMLQSALQLASHDLQHALHIQRLAEQAATKRANVL--AYMKRRIKNPLAGIIFSGK 730
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 868 MQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQR 927
+Q+ DLQ AL Q L + + LAY+++ +KNPL GI F K+L+ +++ E QR
Sbjct: 683 LQLASHDLQHALHIQRLAEQAATKRANVLAYMKRRIKNPLAGIIFSGKILDGTNVDEKQR 742
Query: 928 QYLETSDACERQI 940
L+TS C+ Q+
Sbjct: 743 LVLQTSARCQGQL 755
>gi|406685373|gb|AFS51127.1| phytochrome P, partial [Juniperus communis]
Length = 528
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/511 (69%), Positives = 421/511 (82%), Gaps = 11/511 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQKLAV A SRLQA+ GDIGLLCD+VVE+V++LTGYDRVM+Y FH+D+ GEVV+EIR
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDSVVEEVRELTGYDRVMVYKFHEDERGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYG + WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++++ + K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKN-KTMVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKML 496
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 497 YNALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685369|gb|AFS51125.1| phytochrome P, partial [Juniperus ashei]
gi|406685371|gb|AFS51126.1| phytochrome P, partial [Juniperus coahuilensis]
Length = 528
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/511 (69%), Positives = 421/511 (82%), Gaps = 11/511 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQK+AV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQKVAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL + LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPRLLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYG + WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++++ + K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKN-KTMVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKML 496
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 497 YNALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685329|gb|AFS51105.1| phytochrome P, partial [Callitropsis nootkatensis]
Length = 528
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/511 (69%), Positives = 423/511 (82%), Gaps = 11/511 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEV++EIR
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH Q M NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQCMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYGG+ WL+G+TPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGGKFWLIGITPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTMVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKML 496
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q ++ ++
Sbjct: 497 YNALRGEEDKNVEIKLRTFGPQMQKEIILVV 527
>gi|406685379|gb|AFS51130.1| phytochrome P, partial [Juniperus phoenicea]
Length = 528
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/511 (69%), Positives = 420/511 (82%), Gaps = 11/511 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+R LF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRLLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MA+I+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMDNMGSIASLAMAIIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYG + WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++++ + K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKN-KTMVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKML 496
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 497 YNALRGEEDKNVEIKLRTFGPQMQKEVILVV 527
>gi|406685385|gb|AFS51133.1| phytochrome P, partial [Juniperus tibetica]
Length = 528
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/511 (69%), Positives = 420/511 (82%), Gaps = 11/511 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQK+AV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQKVAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGKDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYG + WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKA LEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKASLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++++ + K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKN-KTMVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKML 496
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ I+
Sbjct: 497 YNALRGEEDKNVEIKLRTFGPQMQKEVILIV 527
>gi|406685333|gb|AFS51107.1| phytochrome P, partial [Calocedrus decurrens]
Length = 529
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/510 (69%), Positives = 420/510 (82%), Gaps = 12/510 (2%)
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRS
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC PV +IQ+ EL Q LCLV STLR+
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRDAPVGIIQADELPQRLCLVGSTLRA 140
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPFPL 381
PHGCH QYM NMGSIASL MAVI+N +++ KLWGLVVCHHTSPR +PFPL
Sbjct: 141 PHGCHAQYMANMGSIASLAMAVIVNGNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFPL 200
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLR+AP IVTQSPSIMDLV
Sbjct: 201 RSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLREAPIGIVTQSPSIMDLV 260
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAALYYGG+ WL+ VTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 261 KCDGAALYYGGKFWLIRVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 380
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S ACEMV
Sbjct: 381 RSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTMVHAQMNDLKLQG-DELNSAACEMV 438
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
R+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 439 RVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKMLY 498
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYIL 711
AL GEEDKNVE+KLR F Q Q V+ ++
Sbjct: 499 NALGGEEDKNVEMKLRTFGPQMQKEVILVV 528
>gi|156752825|gb|ABU94158.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/608 (59%), Positives = 450/608 (74%), Gaps = 17/608 (2%)
Query: 292 FLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVM 351
FLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMGSIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 352 AVIINSK----DS--------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYME 399
AV+IN K DS +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F +QL E
Sbjct: 61 AVVINEKKLDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 400 LQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGV 459
+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY WL+GV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 460 TPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFW 519
TPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI SKDFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 520 FRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQI 579
FRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++AIHSLQ+
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 580 VMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGT 639
++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI VD+ G
Sbjct: 301 ILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGV 359
Query: 640 INGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKF 699
+NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV+++L++
Sbjct: 360 VNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNVQIELKRH 418
Query: 700 ELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVN 759
++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY AI+Q+ +
Sbjct: 419 GSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPS 478
Query: 760 PLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMKGQDMLTK 816
PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+KGQ+ LT+
Sbjct: 479 PLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQ 538
Query: 817 FMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQ 876
I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+ I P+LQ
Sbjct: 539 LRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQ 598
Query: 877 PALEAQGL 884
AL Q +
Sbjct: 599 QALYVQHM 606
>gi|156752811|gb|ABU94151.1| phytochrome N [Pinus sylvestris]
gi|156752813|gb|ABU94152.1| phytochrome N [Pinus sylvestris]
gi|156752815|gb|ABU94153.1| phytochrome N [Pinus sylvestris]
gi|156752817|gb|ABU94154.1| phytochrome N [Pinus sylvestris]
gi|156752819|gb|ABU94155.1| phytochrome N [Pinus sylvestris]
gi|156752821|gb|ABU94156.1| phytochrome N [Pinus sylvestris]
gi|156752823|gb|ABU94157.1| phytochrome N [Pinus sylvestris]
gi|156752827|gb|ABU94159.1| phytochrome N [Pinus sylvestris]
gi|156752829|gb|ABU94160.1| phytochrome N [Pinus sylvestris]
gi|156752831|gb|ABU94161.1| phytochrome N [Pinus sylvestris]
gi|156752833|gb|ABU94162.1| phytochrome N [Pinus sylvestris]
gi|156752835|gb|ABU94163.1| phytochrome N [Pinus sylvestris]
gi|156752837|gb|ABU94164.1| phytochrome N [Pinus sylvestris]
gi|156752839|gb|ABU94165.1| phytochrome N [Pinus sylvestris]
gi|156752841|gb|ABU94166.1| phytochrome N [Pinus sylvestris]
gi|156752843|gb|ABU94167.1| phytochrome N [Pinus sylvestris]
gi|156752845|gb|ABU94168.1| phytochrome N [Pinus sylvestris]
gi|156752847|gb|ABU94169.1| phytochrome N [Pinus sylvestris]
gi|156752851|gb|ABU94171.1| phytochrome N [Pinus sylvestris]
gi|156752855|gb|ABU94173.1| phytochrome N [Pinus sylvestris]
gi|156752857|gb|ABU94174.1| phytochrome N [Pinus sylvestris]
gi|156752859|gb|ABU94175.1| phytochrome N [Pinus sylvestris]
gi|156752861|gb|ABU94176.1| phytochrome N [Pinus sylvestris]
gi|156752863|gb|ABU94177.1| phytochrome N [Pinus sylvestris]
gi|156752867|gb|ABU94179.1| phytochrome N [Pinus sylvestris]
gi|156752871|gb|ABU94181.1| phytochrome N [Pinus sylvestris]
gi|156752873|gb|ABU94182.1| phytochrome N [Pinus sylvestris]
gi|156752875|gb|ABU94183.1| phytochrome N [Pinus sylvestris]
gi|156752877|gb|ABU94184.1| phytochrome N [Pinus sylvestris]
gi|156752883|gb|ABU94187.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/608 (59%), Positives = 449/608 (73%), Gaps = 17/608 (2%)
Query: 292 FLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVM 351
FLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMGSIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 352 AVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYME 399
AV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F +QL E
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 400 LQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGV 459
+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY WL+GV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 460 TPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFW 519
TPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI SKDFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 520 FRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQI 579
FRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++AIHSLQ+
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 580 VMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGT 639
++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI VD+ G
Sbjct: 301 ILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGV 359
Query: 640 INGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKF 699
+NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV+++L++
Sbjct: 360 VNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNVQIELKRH 418
Query: 700 ELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVN 759
++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY AI+Q+ +
Sbjct: 419 GSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPS 478
Query: 760 PLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMKGQDMLTK 816
PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+KGQ+ LT+
Sbjct: 479 PLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQ 538
Query: 817 FMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQ 876
I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+ I P+LQ
Sbjct: 539 LRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQ 598
Query: 877 PALEAQGL 884
AL Q +
Sbjct: 599 QALYVQHM 606
>gi|156752853|gb|ABU94172.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/608 (58%), Positives = 449/608 (73%), Gaps = 17/608 (2%)
Query: 292 FLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVM 351
FLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMGSIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 352 AVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYME 399
AV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F +QL E
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 400 LQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGV 459
+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY WL+G+
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGI 180
Query: 460 TPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFW 519
TPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI SKDFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 520 FRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQI 579
FRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++AIHSLQ+
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 580 VMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGT 639
++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI VD+ G
Sbjct: 301 ILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGV 359
Query: 640 INGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKF 699
+NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV+++L++
Sbjct: 360 VNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNVQIELKRH 418
Query: 700 ELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVN 759
++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY AI+Q+ +
Sbjct: 419 GSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPS 478
Query: 760 PLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMKGQDMLTK 816
PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+KGQ+ LT+
Sbjct: 479 PLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQ 538
Query: 817 FMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQ 876
I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+ I P+LQ
Sbjct: 539 LRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQ 598
Query: 877 PALEAQGL 884
AL Q +
Sbjct: 599 QALYVQHM 606
>gi|406685343|gb|AFS51112.1| phytochrome P, partial [Cunninghamia lanceolata var. konishii]
Length = 477
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/478 (74%), Positives = 403/478 (84%), Gaps = 11/478 (2%)
Query: 224 QALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPA 283
QA+P GDIGLLCDTV E+V++LTGYDRVM+Y FH+D+HGEVV+EIRRSDLEPYLG+H+PA
Sbjct: 1 QAVPNGDIGLLCDTVAEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPA 60
Query: 284 NDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNM 343
DIPQA+RFLF QNRVRMICDC A PV VIQS ELKQPLCLV STLR+PHGCH QYM NM
Sbjct: 61 TDIPQASRFLFMQNRVRMICDCRATPVSVIQSVELKQPLCLVGSTLRAPHGCHAQYMANM 120
Query: 344 GSIASLVMAVIINS----------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFS 393
GSIASLVMAVI+N + S+KLWGLVVCHHTSPR +PFPLR ACEFL+Q F
Sbjct: 121 GSIASLVMAVIVNGNGNDEEGGSGRSSVKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFG 180
Query: 394 LQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGR 453
LQ+ MELQ+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYGGR
Sbjct: 181 LQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGR 240
Query: 454 CWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITS 513
WL+GVTPTE+Q+KDIA WLL H D TGLSTDSLA+AGYPGAA LG AVCGMA ARITS
Sbjct: 241 FWLLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITS 300
Query: 514 KDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINA 573
KDFLFWFRSHTAKE+KWGGAKHHP+ KD+ +MHPRSSFKAFLEVVK RS PWE E++A
Sbjct: 301 KDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDA 360
Query: 574 IHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFG 633
IHSLQ+++R SFQ++ +++D+K +++ N K+QG+DELSSVA EMVRLIETATAPI
Sbjct: 361 IHSLQLILRGSFQDI-DDSDTKTMVHSRLNDLKLQGIDELSSVASEMVRLIETATAPILA 419
Query: 634 VDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKN 691
VDSSG +NGWNAKVAELTGLP EAMGKSL+ ++V EES V ++ AL GEEDKN
Sbjct: 420 VDSSGIVNGWNAKVAELTGLPVGEAMGKSLVHDLVFEESMETVGKMLYHALRGEEDKN 477
>gi|156752885|gb|ABU94188.1| phytochrome N [Pinus pinaster]
Length = 612
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/606 (59%), Positives = 446/606 (73%), Gaps = 17/606 (2%)
Query: 292 FLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVM 351
FLF +NRVRMICDC+A PV VIQ + L + L STLR+PHGCH QYM NMGSIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 352 AVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYME 399
AV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F +QL E
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 400 LQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGV 459
+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY G WL+G
Sbjct: 121 VELAAQMREKRILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEGNFWLLGA 180
Query: 460 TPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFW 519
TPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI SKDFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 520 FRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQI 579
FRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++AIHSLQ+
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 580 VMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGT 639
++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI VD+ G
Sbjct: 301 ILRGSCKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGV 359
Query: 640 INGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKF 699
+NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV+++L++
Sbjct: 360 VNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNVQIELKRH 418
Query: 700 ELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVN 759
++ V +LVNAC+SRD K NV GVCFV QD+T +K +MDKF R+QGDY AI+Q+ +
Sbjct: 419 GSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKTVMDKFTRIQGDYRAIVQNPS 478
Query: 760 PLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMKGQDMLTK 816
PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+KGQ+ LT+
Sbjct: 479 PLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQ 538
Query: 817 FMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQ 876
I+L + GQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+ I P+LQ
Sbjct: 539 LRIILNSSMAGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQ 598
Query: 877 PALEAQ 882
AL Q
Sbjct: 599 QALYVQ 604
>gi|363547897|gb|AEW26988.1| phytochrome P [Cryptomeria japonica]
Length = 484
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/475 (74%), Positives = 407/475 (85%), Gaps = 3/475 (0%)
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQ+LAV A SRLQA+P GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRRS
Sbjct: 13 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 72
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF QNRVR+ICDC A PV VIQ +ELKQPLCLV STLR+
Sbjct: 73 DLEPYLGLHYPATDIPQASRFLFMQNRVRVICDCRANPVGVIQVEELKQPLCLVGSTLRA 132
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQA 391
PHGCH QYM NMGSIASLVMAVI+N ++KLWGLVVCHHTSPR +PFPLR ACEFL+Q
Sbjct: 133 PHGCHAQYMANMGSIASLVMAVIVNG--NVKLWGLVVCHHTSPRAVPFPLRSACEFLMQT 190
Query: 392 FSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYG 451
F LQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDLVKCDGAALYYG
Sbjct: 191 FGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYG 250
Query: 452 GRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARI 511
G+ WL+GVTPT +Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG AVCGMA ARI
Sbjct: 251 GKFWLLGVTPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARI 310
Query: 512 TSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEI 571
TSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK RS PWE E+
Sbjct: 311 TSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEM 370
Query: 572 NAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPI 631
+AIHSLQ+++R SFQ++ +++++K + Q + K+QG+DELSSVA EMVRLIETATAPI
Sbjct: 371 DAIHSLQLILRGSFQDI-DDSETKTMVHVQLHDLKLQGIDELSSVANEMVRLIETATAPI 429
Query: 632 FGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
VDS+G +NGWNAK AELTGLP EAMGKSL+ ++V EES VE ++ AL G
Sbjct: 430 LAVDSAGIVNGWNAKAAELTGLPVGEAMGKSLVHDLVFEESMETVEKMLYHALRG 484
>gi|89331077|emb|CAJ80905.1| phytochrome A [Chelone obliqua]
Length = 615
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/613 (56%), Positives = 453/613 (73%), Gaps = 12/613 (1%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCD
Sbjct: 3 KPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++ +LTGYDRVM+Y FHDDDHGEV SE+ + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEAFELTGYDRVMIYKFHDDDHGEVFSEVTKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V V+Q ++L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRAKHVKVVQDEKLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKDS-----------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQ 405
D +LWGLVVCH+TSPR+IPFPLRYACEFL Q F++ + EL++ Q
Sbjct: 183 EGDEDGSESVHPQKRKRLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKELELENQ 242
Query: 406 LAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQ 465
+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGAAL Y + + +G+TPT+ Q
Sbjct: 243 MLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALMYKNKKYKMGLTPTDFQ 302
Query: 466 LKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTA 525
++DI WL H D TGLSTDSL +AG+PGA LG A+CGMA +I+ +D+LFWFRSHTA
Sbjct: 303 IRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAICGMAAVKISERDWLFWFRSHTA 362
Query: 526 KEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSF 585
E++WGGAKH KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F
Sbjct: 363 AEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF 422
Query: 586 QEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
++ E + +T+ ++ G+ EL +V EMVRLIETA+ PI VD G +NGWN+
Sbjct: 423 KDGENADSDTKAIHTRLTDLRIDGMQELEAVTSEMVRLIETASVPILAVDVDGHVNGWNS 482
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+A+LTGLP EA+GK + E+V + S V ++ AL G+E++NV+ +++ +
Sbjct: 483 KIADLTGLPVDEAIGKQFL-ELVEDSSTDTVSKMLKLALEGKEEQNVQFEVKTHGERSDS 541
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V ++VNAC S+D + NV GVCF+ QDIT K +MDKF R++GDY+AI+Q+ NPLIPPI
Sbjct: 542 GPVTLVVNACASKDVEENVVGVCFIAQDITAHKNMMDKFTRIEGDYKAIVQNPNPLIPPI 601
Query: 766 FASDENACCSEWN 778
F +DE CSEWN
Sbjct: 602 FGTDEFGWCSEWN 614
>gi|156752809|gb|ABU94150.1| phytochrome N [Pinus sylvestris]
gi|156752849|gb|ABU94170.1| phytochrome N [Pinus sylvestris]
gi|156752865|gb|ABU94178.1| phytochrome N [Pinus sylvestris]
gi|156752879|gb|ABU94185.1| phytochrome N [Pinus sylvestris]
gi|156752881|gb|ABU94186.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/608 (58%), Positives = 448/608 (73%), Gaps = 17/608 (2%)
Query: 292 FLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVM 351
FLF +NRVRMICDC+A PV VIQ + + L STLR+PHGCH QYM NMGSIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERSPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 352 AVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYME 399
AV+IN K+ +LWGLVVCHHTSPRY+PFPLRYACEFL+Q F +QL E
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 400 LQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGV 459
+++A Q+ EK ILRTQ LLCDMLLRD P IVTQ P+IMDLV+CDGAALYY WL+GV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 460 TPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFW 519
TPTE+Q++DI WL +H D TGLSTDSL AGYPGA LG AVCG+A RI SKDFLFW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 520 FRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQI 579
FRSHTAKE+KWGGAKH + +D+G KMHPRSSF AFLEVVK RS WE E++AIHSLQ+
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 580 VMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGT 639
++R S +E + + + N Q N K+Q +DEL++V EMVRLIETATAPI VD+ G
Sbjct: 301 ILRGSRKET-DGSGRNISINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGV 359
Query: 640 INGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKF 699
+NGWN K AELTGL E +G+ LI+ +V E S V+ ++ AL G E++NV+++L++
Sbjct: 360 VNGWNRKAAELTGLSVEEVLGEPLIN-LVEETSAENVKRMLHLALQGVEEQNVQIELKRH 418
Query: 700 ELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVN 759
++ V +LVNAC+SRD K NV GVCFV QD+T +K++MDKF R+QGDY AI+Q+ +
Sbjct: 419 GSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPS 478
Query: 760 PLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN---FCRMKGQDMLTK 816
PLIPPIF +DE CSEWN+AMEK++GW R E+I KML E+FG CR+KGQ+ LT+
Sbjct: 479 PLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQ 538
Query: 817 FMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQ 876
I+L +TGQ TE FPFGFF+R G++VE L+A+++ D EGK+ G FCF+ I P+LQ
Sbjct: 539 LRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQ 598
Query: 877 PALEAQGL 884
AL Q +
Sbjct: 599 QALYVQHM 606
>gi|373842328|gb|AEY77153.1| phytochrome B, partial [Brassica juncea]
Length = 514
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/514 (67%), Positives = 411/514 (79%), Gaps = 13/514 (2%)
Query: 282 PANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMT 341
PA DIPQA+RFLFKQNRVRMI DCHA PV+V+Q L Q +CLV STLR+PHGCH QYM
Sbjct: 1 PATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMA 60
Query: 342 NMGSIASLVMAVIINS-----------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQ 390
NMGSIASL MAVIIN + SM+LWGLVVCHHTS R IPFPLRYACEFL+Q
Sbjct: 61 NMGSIASLTMAVIINGNEDDGSNVAGGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQ 120
Query: 391 AFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYY 450
AF LQL MELQ+A+Q++EK +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y
Sbjct: 121 AFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLY 180
Query: 451 GGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATAR 510
G + +GV PTE+Q+KD+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A
Sbjct: 181 HGNYYPLGVAPTEAQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAY 240
Query: 511 ITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSE 570
IT +DFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS PWE +E
Sbjct: 241 ITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAE 300
Query: 571 INAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM--QGVDELSSVACEMVRLIETAT 628
++AIHSLQ+++RDSF+E E +SK Q S QG+DEL +VA EMVRLIETAT
Sbjct: 301 MDAIHSLQLILRDSFKESEAAMNSKTADGAVQPYSMAGEQGIDELGAVAREMVRLIETAT 360
Query: 629 APIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEE 688
PIF VD G INGWNAK+AELTGL EAMGKSL+ +++++E++ V+ LI RAL G+E
Sbjct: 361 VPIFAVDVGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVDKLISRALRGDE 420
Query: 689 DKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQ 748
DKNVE+KL+ F + Q V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +Q
Sbjct: 421 DKNVEIKLKTFSPELQGKAVFVVVNACSSKDYSNNIVGVCFVGQDVTGQKIVMDKFINIQ 480
Query: 749 GDYEAIIQSVNPLIPPIFASDENACCSEWNAAME 782
GDY+AI+ S NPLIPPIFA+DEN CC EWN A+E
Sbjct: 481 GDYKAIVHSPNPLIPPIFAADENTCCLEWNTALE 514
>gi|89331107|emb|CAJ80920.1| phytochrome A [Glechoma hederacea]
Length = 607
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/605 (57%), Positives = 453/605 (74%), Gaps = 12/605 (1%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQALP G I LCD
Sbjct: 3 KPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSIERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+ ++V +LTGYDRVM+Y FH+DDHGEV +EIR+ LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMSQEVFELTGYDRVMIYKFHEDDHGEVFTEIRKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V V+Q + L L L STLR+PH CHLQYM NM SIASLVM++++N
Sbjct: 123 NKVRMICDCRANHVKVVQDENLPLELTLCGSTLRAPHSCHLQYMENMNSIASLVMSIVVN 182
Query: 357 S-----KDSM------KLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQ 405
DS +LWGLVVCHHTSPR++PFPLRYACEFL Q F++ + EL++ Q
Sbjct: 183 EGEEEGSDSTHPDKRKRLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELENQ 242
Query: 406 LAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQ 465
+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGAAL Y + + +G+TP + Q
Sbjct: 243 MLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYRLGMTPGDFQ 302
Query: 466 LKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTA 525
++D+ WL H D TGLSTDSL +AG+PGA LG AVCGMA +IT KD+LFWFRSHTA
Sbjct: 303 IRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSHTA 362
Query: 526 KEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSF 585
EV+WGGAKH P+ KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R+S+
Sbjct: 363 AEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNSY 422
Query: 586 QEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
+E E+ + +T+ + +++G+ EL +V EMVRLIETA+ PI VD G +NGW
Sbjct: 423 KEDEDTDTYAKAIHTRLSDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGWYT 482
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+A+LTGLP +A+G + +V E S AV +++ AL GEE++NV+ +++ + +
Sbjct: 483 KIADLTGLPVDKAIGCHFL-SLVEESSADAVSSMLELALKGEEERNVQFEIKTHGERSES 541
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
+ ++VNAC SRD K +V GVCF+ QDIT +K +MDKF R++GDY+AI+Q+ NPLIPPI
Sbjct: 542 GPISLVVNACASRDIKESVVGVCFIAQDITAQKSMMDKFTRIEGDYKAIVQNPNPLIPPI 601
Query: 766 FASDE 770
F +DE
Sbjct: 602 FGTDE 606
>gi|89331027|emb|CAJ80880.1| phytochrome A [Ajuga reptans]
Length = 608
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/606 (56%), Positives = 450/606 (74%), Gaps = 13/606 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCD
Sbjct: 3 KPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV +E+ + DLEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVFAEVTKPDLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V V+Q + L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCKANHVKVVQDENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKDS------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAM 404
+ +LWGLVVCH TSPR++PFPLRYACEFL Q F++ + EL++
Sbjct: 183 EGNEEGGSESTHPEKRKRLWGLVVCHLTSPRFVPFPLRYACEFLAQVFAIHVNKELELEN 242
Query: 405 QLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTES 464
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGAAL Y + + +G+TPT+
Sbjct: 243 QMMEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYKLGLTPTDF 302
Query: 465 QLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHT 524
Q++D+ WL H D TGLSTDSL +AG+PGA LG AVCGMA +I KD+LFWFRSHT
Sbjct: 303 QIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGHAVCGMAAVKINDKDWLFWFRSHT 362
Query: 525 AKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDS 584
A E++WGGAKH P KD+G KMHPRSSF+AFLE VK RS PW+ E++AIHSLQ+++R++
Sbjct: 363 ASEIRWGGAKHEPGEKDDGRKMHPRSSFRAFLEAVKTRSLPWKDYEMDAIHSLQLILRNA 422
Query: 585 FQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWN 644
F+E ++++ +T+ N ++ G+ EL +V EMVRLIETA+ PI VD+ G +NGWN
Sbjct: 423 FKEADDKDTDTKMIHTKLNDLQIDGIQELEAVTSEMVRLIETASVPILAVDADGLVNGWN 482
Query: 645 AKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQ 704
K+A+LT LP +A+G+ +D +V + S V +++ AL G+E++NV+ +++ +
Sbjct: 483 TKIADLTSLPVDKAIGRHFLD-LVEDTSADIVSHMLQLALQGKEEQNVQFEIKTHGENSE 541
Query: 705 HSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPP 764
V ++VNAC SRD K NV GVCF+ QDIT +K +MDKF R++GDY AIIQ+ NPLIPP
Sbjct: 542 SGPVTLIVNACASRDVKENVVGVCFIAQDITAQKSMMDKFTRIEGDYRAIIQNPNPLIPP 601
Query: 765 IFASDE 770
IF +DE
Sbjct: 602 IFGTDE 607
>gi|406685349|gb|AFS51115.1| phytochrome P, partial [Cupressus chengiana]
Length = 507
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/491 (71%), Positives = 411/491 (83%), Gaps = 11/491 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQKLAV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEV++EIR
Sbjct: 19 VPSQKLAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVLAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQRLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYGG+ WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGGKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++ +++++K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDI-DDSENKTVVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGVVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESVETVAKML 496
Query: 681 CRALLGEEDKN 691
AL GEEDKN
Sbjct: 497 YNALRGEEDKN 507
>gi|89330150|emb|CAJ80987.1| phytochrome A [Strobilanthes attenuata]
Length = 607
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/605 (56%), Positives = 447/605 (73%), Gaps = 12/605 (1%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ G++ID EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCD
Sbjct: 3 KPFYAIIHRVTGGLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV SE+ + LEPY G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVFSEVTKPGLEPYSGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V V+Q ++L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVNVVQDEKLTLDLTLCGSTLRAPHSCHLQYMENMISIASLVMSVVVN 182
Query: 357 SKDS-----------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQ 405
D +LWGLVVCHH+SPR++PFPLRYACEFL Q F++ + EL++ Q
Sbjct: 183 EGDEEASNSSQPEKRKRLWGLVVCHHSSPRFVPFPLRYACEFLAQVFAIHVNKELELENQ 242
Query: 406 LAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQ 465
+ EKNILRTQ LLCDML+RDAP IV+QSP++MDLVKCDGA L Y G+ + +G++P + Q
Sbjct: 243 MLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKGKMYRLGLSPIDFQ 302
Query: 466 LKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTA 525
+DI WL H D TGLSTDSL +AG+PGA LG AVCGMA +IT KD+LFWFRSHTA
Sbjct: 303 TRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLGDAVCGMAAVKITDKDWLFWFRSHTA 362
Query: 526 KEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSF 585
E++WGGAKH P KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F
Sbjct: 363 AEIRWGGAKHEPSEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF 422
Query: 586 QEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
+E E +N +T+ + ++ G+ EL +V EMVRLIETA+ PI VD G +NGWN
Sbjct: 423 KEAEGDNMEANVIHTRLSDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNT 482
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+A+LTGL +A+G+ I +V E S V ++ AL G+E++NV+ +++ +
Sbjct: 483 KIADLTGLTVDKAIGRHFIG-LVEESSADIVSKMLELALQGKEERNVQFEIKTHGPGSEA 541
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
+ ++VNAC SRD K NV GVCF+ QDIT +K +MDKF +++GDY AI+Q+ NPLIPPI
Sbjct: 542 GPISLVVNACASRDVKENVVGVCFIAQDITAQKTMMDKFTKIEGDYRAIVQNPNPLIPPI 601
Query: 766 FASDE 770
F +DE
Sbjct: 602 FGTDE 606
>gi|89330092|emb|CAJ80958.1| phytochrome A [Paulownia tomentosa]
Length = 607
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/605 (56%), Positives = 448/605 (74%), Gaps = 12/605 (1%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ +++D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCD
Sbjct: 3 KPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV +EI + LEPY G+H+PA DIPQAARFL +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLSMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V V+Q + L L L STLR+PH CHLQYM NM SIASLVM+ ++N
Sbjct: 123 NKVRMICDCRANHVKVVQDENLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSAVVN 182
Query: 357 SKDS-----------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQ 405
D +LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + EL++ Q
Sbjct: 183 EGDEEGSDSSHPEKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQ 242
Query: 406 LAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQ 465
+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGAAL Y + + +G+TP++ Q
Sbjct: 243 MLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYRLGLTPSDFQ 302
Query: 466 LKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTA 525
++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT KD+LFWFRSHTA
Sbjct: 303 IRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFRSHTA 362
Query: 526 KEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSF 585
E++WGGAKH P KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F
Sbjct: 363 AEIRWGGAKHEPGGKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF 422
Query: 586 QEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
+E E+ + +T+ N +++G+ EL +V EMVRLIETA+ PI VD G +NGWN
Sbjct: 423 KEAEDTDLGSKAIHTRLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNT 482
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+A+LTGLP +A+G+ + +V + S V ++ AL G+E++NV+ +++ + +
Sbjct: 483 KIADLTGLPVDKAIGRHFL-ALVEDSSADTVSKMLELALQGKEERNVQFEIKTHGPRSES 541
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
+ ++VNAC SRD K NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ NPLIPPI
Sbjct: 542 GPISLVVNACASRDVKENVVGVCFIAQDITAQKSMMDKFTRIEGDYRAIVQNPNPLIPPI 601
Query: 766 FASDE 770
F +DE
Sbjct: 602 FGTDE 606
>gi|315377406|gb|ADU05540.1| phytochrome A [Tovaria pendula]
Length = 598
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/599 (57%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSEI + LEPYLG+H+PA DIPQAARFLF +N+VRMI DCHA V V
Sbjct: 61 TYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N D
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVVNEGDEESDAPNSAQAQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELDNQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TPT+SQL DIA WL + H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKNKIWRLGITPTDSQLHDIAAWLSDYHRD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG AVCGMA R+TSKD +FWFRSHTA E+KWGGAKH P
Sbjct: 301 STGLSTDSLYDAGFPQALTLGDAVCGMAAVRVTSKDMIFWFRSHTAGEIKWGGAKHEPGE 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KDN KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDNARKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDFNTKFLH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP +A+
Sbjct: 421 SKLNDLKIDGMKELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDKAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
G + +V + S V+ ++ AL G+E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GNHFL-TLVEDSSVDRVKKMLDMALQGKEEQNVQFEIKTHGARIDAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
+ NV GVCFV QD+T +K +MDKF R++GDY+ IIQ+ NP IPPIF SDE C+EWN
Sbjct: 540 LQENVVGVCFVAQDLTGQKNVMDKFTRIEGDYKVIIQNPNPXIPPIFGSDEFGWCTEWN 598
>gi|406685381|gb|AFS51131.1| phytochrome P, partial [Juniperus procera]
Length = 507
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/491 (70%), Positives = 408/491 (83%), Gaps = 11/491 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQK+AV A SRLQA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VPSQKVAVRATSRLQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGKDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYG + WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++++ + K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKN-KTMVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKML 496
Query: 681 CRALLGEEDKN 691
AL GEEDKN
Sbjct: 497 YNALRGEEDKN 507
>gi|89330108|emb|CAJ80966.1| phytochrome A [Penstemon cobaea]
Length = 607
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/605 (56%), Positives = 448/605 (74%), Gaps = 12/605 (1%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCD
Sbjct: 3 KPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV SE+ + EPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVFSEVTKPGHEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V V+Q ++L L L STLR+PHGCHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRAKHVKVVQDEKLSFDLTLCGSTLRAPHGCHLQYMENMSSIASLVMSVVVN 182
Query: 357 SKDS-----------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQ 405
D +LWGLVVCHHTSPR++PFPLRYACEFL Q F++ + EL++ Q
Sbjct: 183 EGDEDGPDSVIPQKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQ 242
Query: 406 LAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQ 465
+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGAAL Y + + +G+TPT+ Q
Sbjct: 243 MLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALMYKNKKYKMGLTPTDFQ 302
Query: 466 LKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTA 525
++DI WL H D TGLSTDSL +AGYPGA LG AVCGMA +I+ +D+LFWFRSHTA
Sbjct: 303 IRDIVSWLDAYHRDSTGLSTDSLYDAGYPGALALGDAVCGMAAVKISDEDWLFWFRSHTA 362
Query: 526 KEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSF 585
E++WGGAKH KD+G KMHPRSSFKAFLEVVK RS P++ E++AIHSLQ+++R++F
Sbjct: 363 AEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPFKDYEMDAIHSLQLILRNAF 422
Query: 586 QEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
++ E +T+ ++ G+ EL +V EMVRLIETA+ PI VD G +NGWN+
Sbjct: 423 KDGENAEADTKAIHTRLTDLRIDGMQELEAVTSEMVRLIETASVPILAVDVEGYVNGWNS 482
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+A+LTGL EA+GK + E+V + S +V ++ AL G+E++NV+ +++ +
Sbjct: 483 KIADLTGLRVDEAIGKQFL-ELVEDSSTDSVSKMLKLALQGKEEQNVQFEIKTHGQRSDS 541
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
+ ++VNAC S+D K NV GVCF+ QDIT K +MDKF R++GDY+AI+Q+ NPLIPPI
Sbjct: 542 GPITLVVNACASKDVKENVVGVCFIAQDITAHKNMMDKFTRIEGDYKAIVQNPNPLIPPI 601
Query: 766 FASDE 770
F +DE
Sbjct: 602 FGTDE 606
>gi|406685377|gb|AFS51129.1| phytochrome P, partial [Juniperus oxycedrus]
Length = 507
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/491 (70%), Positives = 407/491 (82%), Gaps = 11/491 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQKLAV A SR+QA+ GDIGLLCD VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 19 VHSQKLAVRATSRVQAVANGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q LCLV STL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQLLCLVGSTL 138
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
R+PHGCH QYM NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 198
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDML RDAP IVTQSPSIMDL
Sbjct: 199 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLFRDAPIGIVTQSPSIMDL 258
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYG + WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 259 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 318
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 319 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 378
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++++ + K + Q N K+QG DEL+S ACEM
Sbjct: 379 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKN-KTMVHAQMNDLKLQG-DELNSAACEM 436
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 437 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKML 496
Query: 681 CRALLGEEDKN 691
AL GEEDKN
Sbjct: 497 YNALRGEEDKN 507
>gi|315377400|gb|ADU05537.1| phytochrome A [Koeberlinia spinosa]
Length = 598
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/599 (57%), Positives = 441/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ GA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTATGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSEI + LEPYLG+H+PA DIPQAARFLF +N+VRMI DCHA V V
Sbjct: 61 TYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N D
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVVNEGDEESDAPNSAQAQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELDNQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TPT+SQL DIA WL + H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKNKIWRLGITPTDSQLHDIAAWLSDYHRD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG AVCGMA R+TSKD +FWFRSHTA E+KWGGAKH P
Sbjct: 301 STGLSTDSLYDAGFPQALTLGDAVCGMAAVRVTSKDMIFWFRSHTAGEIKWGGAKHEPGE 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KDN K HPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDNARKTHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDFNTKFLH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP +A+
Sbjct: 421 SKLNDLKIDGMKELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDKAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
G + +V + S V+ ++ AL G+E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GNHFL-TLVEDSSVDRVKKMLDMALQGKEEQNVQFEIKTHGARIDAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
+ NV GVCFV QD+T +K +MDKF R++GDY+AIIQ+ NP IPPIF SDE C+EWN
Sbjct: 540 LQENVVGVCFVAQDLTGQKNVMDKFTRIEGDYKAIIQNPNPSIPPIFGSDEFGWCTEWN 598
>gi|315377402|gb|ADU05538.1| phytochrome A [Moringa oleifera]
Length = 596
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/597 (57%), Positives = 443/597 (74%), Gaps = 14/597 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G I LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEV+SEI + LEPYLG+H+PA DIPQAARFLF +N+VRMI DCHA + V
Sbjct: 61 AYKFHDDDHGEVISEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHIKV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N D
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEGDEETDGANPVQPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP IV+Q P+IMDLVKCDGAAL Y + W +GVTPT+ QL +IA WL + H D
Sbjct: 241 DMLMRDAPLGIVSQIPNIMDLVKCDGAALLYKSKLWRLGVTPTDVQLHEIASWLSDYHMD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+PGA LG V GMA RITSKD LFWFRSHTA E++WGGAKH P
Sbjct: 301 STGLSTDSLYDAGFPGALALGDVVSGMAAVRITSKDMLFWFRSHTAAEIRWGGAKHEPGE 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ + + +
Sbjct: 361 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDTKTVEFNTKTIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K++G+ EL +V EMVRLIETAT PI VD +G +NGWN K++ELTGLP EA+
Sbjct: 421 SKLNDLKLEGMQELEAVTSEMVRLIETATVPILAVDVNGLLNGWNTKISELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G+E+++V+ +++ F + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSIDTVKKMLYMALQGKEEQDVQFQIKTFGSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
NV GVCFV QDIT +K++MDKF R++GDY+AI+Q+ NPLIPPIF +DE C+E
Sbjct: 540 LHENVAGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNHNPLIPPIFGADEFGWCTE 596
>gi|89331117|emb|CAJ80925.1| phytochrome A [Lamium purpureum]
Length = 608
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/606 (56%), Positives = 443/606 (73%), Gaps = 13/606 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQ+LP G I LCD
Sbjct: 3 KPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAINRLQSLPSGSIERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FH+DDHGEV +EI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMVYKFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRATHVKVIQDGNLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKDS------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAM 404
D +LWGLVVCHHT+PR++PFPLRYACEFL Q F++ + E ++
Sbjct: 183 EGDEEGSGSDSPPEKRKRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKEFELES 242
Query: 405 QLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTES 464
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGAAL Y G+ + +G+TPT+
Sbjct: 243 QMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKGKKYRLGMTPTDF 302
Query: 465 QLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHT 524
Q++D+ WL H D TGLSTDSL +AG+PGA LG A+CGMA +IT KD+LFWFRSHT
Sbjct: 303 QIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHT 362
Query: 525 AKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDS 584
A EV+WGGAKH P KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++
Sbjct: 363 ASEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNA 422
Query: 585 FQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWN 644
F+E + + + + ++ G+ EL +V EMVRLIETA+ PI VD G +NGWN
Sbjct: 423 FKESGGTDVEARAIHMKLSDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWN 482
Query: 645 AKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQ 704
K+A+LTGL +A+G+ +D +V + S V ++ AL G E+ NV+ +L+ +
Sbjct: 483 TKIADLTGLSVDKAIGRHFLD-LVEDSSAHTVNQMLKLALEGNEEHNVQFELKNHGEMTE 541
Query: 705 HSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPP 764
+ ++VNAC SRD K +V GVCF+ QDIT +K +MDKF R++GDY AI+Q+ NPLIPP
Sbjct: 542 AGPISLVVNACASRDVKESVVGVCFIAQDITAQKSMMDKFTRIEGDYRAIVQNPNPLIPP 601
Query: 765 IFASDE 770
IF +DE
Sbjct: 602 IFGTDE 607
>gi|89330110|emb|CAJ80967.1| phytochrome A [Phtheirospermum japonicum]
Length = 610
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/608 (56%), Positives = 447/608 (73%), Gaps = 15/608 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ G++ID EP K + ++ AGA+QS KLA AI+RLQALP G + LCD
Sbjct: 3 KPFYAIIHRVTGGLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LT YDRVM+Y FHDDDHGEV+SEI + L+PY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTSYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKD-------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVA 403
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++
Sbjct: 183 EGNEDGPDSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIELE 242
Query: 404 MQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTE 463
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGA L Y + + +G+TP++
Sbjct: 243 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTPSD 302
Query: 464 SQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSH 523
Q++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT KD+LFWFRSH
Sbjct: 303 FQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFRSH 362
Query: 524 TAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRD 583
TA E++WGGAKH P KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R+
Sbjct: 363 TAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDIEMDAIHSLQLILRN 422
Query: 584 -SFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTING 642
S +E EE + + + + N ++ G+ EL +V EMVRLIETA+ PIF VD G +NG
Sbjct: 423 ASNKEAEERDMDGKEIHARLNDLQLDGMQELEAVTSEMVRLIETASVPIFAVDVDGLVNG 482
Query: 643 WNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQ 702
WN K+A+LTGLP +A+G+ + +V + S V ++ AL G E++NV+ +++ +
Sbjct: 483 WNTKIADLTGLPVEKAIGRHFL-ALVEDSSAEKVNKMLELALQGNEERNVQFEIKTHGPR 541
Query: 703 KQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLI 762
+ + ++VNAC SRD K NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ N LI
Sbjct: 542 SESGPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQLI 601
Query: 763 PPIFASDE 770
PPIF SDE
Sbjct: 602 PPIFGSDE 609
>gi|345424394|gb|AEN85301.1| phytochrome A, partial [Erucaria erucarioides]
gi|345424398|gb|AEN85303.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +GVTP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EVKWGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331043|emb|CAJ80888.1| phytochrome A [Boschniakia hookeri]
Length = 615
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/614 (55%), Positives = 447/614 (72%), Gaps = 13/614 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQALPGG + LCD
Sbjct: 3 KPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPGGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV +EI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V V+Q + L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVKVVQDENLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 S-----------KDSMK-LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAM 404
D K LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E ++
Sbjct: 183 EGNEDGPDSSSVPDKRKTLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIYVNKEFELEN 242
Query: 405 QLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTES 464
Q+ EKNILRTQ LLCD+LLRDAP IV+QSP++MDLVKCDGA L Y + +G+TP++
Sbjct: 243 QMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKNTKYRLGLTPSDF 302
Query: 465 QLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHT 524
Q++DI WL H D TGLSTDSL +AG+PGA L AVCGM RIT +D+LFWFRSHT
Sbjct: 303 QIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLCDAVCGMVAVRITERDWLFWFRSHT 362
Query: 525 AKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDS 584
A E++WGGAKH P D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++
Sbjct: 363 AAEIQWGGAKHEPGETDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNA 422
Query: 585 FQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWN 644
F+E E + + + + + ++ GV E+ +V EMVRLIETA+ PIF VD G +NGWN
Sbjct: 423 FKESEGRDSESREIHARLHDLQIDGVREIEAVTSEMVRLIETASVPIFAVDVDGLVNGWN 482
Query: 645 AKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQ 704
K+A+LTGL +A+G + +V + S V ++ AL G+E++NV+ +++ +
Sbjct: 483 TKIADLTGLCVDKAIGWHFL-ALVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQTSE 541
Query: 705 HSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPP 764
+ ++VNAC SRD K NV GVCF+ QDIT +K++MDKF R++GDY I+Q+ NPLIPP
Sbjct: 542 SGPITLIVNACASRDVKGNVVGVCFIAQDITTQKIMMDKFTRIEGDYRTIVQNPNPLIPP 601
Query: 765 IFASDENACCSEWN 778
IF +DE CSEWN
Sbjct: 602 IFGTDEFGWCSEWN 615
>gi|345424502|gb|AEN85355.1| phytochrome A, partial [Kremeriella cordylocarpus]
Length = 599
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/600 (57%), Positives = 443/600 (73%), Gaps = 15/600 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ ++ LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 361 --MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLL 418
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 419 CDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG 478
CDML+RDAP IV+QSP++MDLVKCDGAAL Y + W +G+TP+E L++IA WL H
Sbjct: 241 CDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHT 300
Query: 479 DCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE 538
D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 539 HKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG 598
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 599 NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEA 658
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA
Sbjct: 421 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 659 MGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSR 718
+GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SR
Sbjct: 481 IGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 539
Query: 719 DYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
D NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|406685383|gb|AFS51132.1| phytochrome P, partial [Juniperus scopulorum]
Length = 542
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/526 (67%), Positives = 418/526 (79%), Gaps = 12/526 (2%)
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
V SQKLAV A SRLQA+ GDIGLLCD+VVE+V++LTGYDRVM+Y FH+D+HGEVV+EIR
Sbjct: 20 VPSQKLAVRATSRLQAVANGDIGLLCDSVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 79
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
RSDLEPYLG+H+PA DIPQA+RFLF QN+VRMI DC A PV +IQ++EL Q
Sbjct: 80 RSDLEPYLGLHYPATDIPQASRFLFMQNKVRMISDCRADPVRIIQAEELPQXXXXXXXXX 139
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINS---------KDSMKLWGLVVCHHTSPRYIPFP 380
M NMGSIASL MAVI+N+ +++ KLWGLVVCHHTSPR +PFP
Sbjct: 140 XXXXXXXXXXMANMGSIASLAMAVIVNNGNDEVGSSGRNTGKLWGLVVCHHTSPRAVPFP 199
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LR ACEFL+Q FSLQ+ ME+Q+A QL E NILRTQ LLCDMLLRDAP IVTQSPSIMDL
Sbjct: 200 LRSACEFLMQTFSLQINMEMQLATQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDL 259
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKCDGAALYYG + WL+GVTPTE+Q+KDIA WLL HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 260 VKCDGAALYYGDKFWLIGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLG 319
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+G +MHPRSSFKAFLEVVK
Sbjct: 320 DAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVK 379
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEM 620
RS PW+ E++AIHSLQ+++R SF+++++ + K + Q N K+QG DEL+S ACEM
Sbjct: 380 RRSLPWDNVEMDAIHSLQLILRGSFKDIDDSKN-KTMVHAQMNDLKLQG-DELNSAACEM 437
Query: 621 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLI 680
VR+IETA API GVDS+G +NGWN+ AELTGLPA EAMGKSL+ ++V EES V ++
Sbjct: 438 VRVIETAHAPILGVDSAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVLEESIETVAKML 497
Query: 681 CRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
AL GEEDKNVE+KLR F Q Q V+ ++VNAC+SRDY N+ G
Sbjct: 498 YNALRGEEDKNVEIKLRTFGPQMQKEVI-LVVNACSSRDYTYNIVG 542
>gi|345424278|gb|AEN85243.1| phytochrome A, partial [Coincya longirostra]
Length = 599
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/600 (57%), Positives = 443/600 (73%), Gaps = 15/600 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 361 --MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLL 418
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 419 CDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG 478
CDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP+E QL +IA WL H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHT 300
Query: 479 DCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE 538
D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 539 HKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG 598
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 599 NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEA 658
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 659 MGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSR 718
+GK + +V + S V+ ++ +AL G E++NV+ +++ + + ++VNAC SR
Sbjct: 481 IGKHFL-TLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 539
Query: 719 DYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
D NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424396|gb|AEN85302.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDTVV++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +GVTP++ L+++A WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEVASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EVKWGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQIPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424276|gb|AEN85242.1| phytochrome A, partial [Coincya longirostra]
Length = 599
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/600 (57%), Positives = 443/600 (73%), Gaps = 15/600 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVGV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 361 --MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLL 418
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 419 CDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG 478
CDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP+E QL +IA WL H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHT 300
Query: 479 DCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE 538
D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 539 HKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG 598
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 599 NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEA 658
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 659 MGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSR 718
+GK + +V + S V+ ++ +AL G E++NV+ +++ + + ++VNAC SR
Sbjct: 481 IGKHFL-TLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 539
Query: 719 DYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
D NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|89331101|emb|CAJ80917.1| phytochrome A [Euphrasia regelii]
Length = 619
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/618 (56%), Positives = 449/618 (72%), Gaps = 17/618 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AISRLQ+LP G + LC+
Sbjct: 3 KPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERLCE 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FH+DDHGEV++EI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKDS--------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + EL++
Sbjct: 183 EGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 242
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGA L + + +G+TP+
Sbjct: 243 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGITPS 302
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
+ Q++DI WL H D TGLSTD L +AG+PGA LG VCGMA RIT +D+LFWFRS
Sbjct: 303 DFQIRDIVSWLDEYHRDSTGLSTDGLYDAGFPGALALGDVVCGMAAVRITDRDWLFWFRS 362
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTA E++WGGAKH +D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R
Sbjct: 363 HTASEIRWGGAKHEQGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 422
Query: 583 D-SFQEMEEENDSK-VQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTI 640
+ S +EMEE D + V+ + N ++ GV EL +V EMVRLIETA+ PIF V G +
Sbjct: 423 NASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 482
Query: 641 NGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFE 700
NGWN K+A+LTGLP +A+G + +V E S AV ++ AL G+E++NV +++
Sbjct: 483 NGWNTKIADLTGLPVDKAIGVHFL-SLVEESSAEAVSKMLELALEGKEEQNVHFEIKTHG 541
Query: 701 LQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNP 760
S + ++VNAC SRD + NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ NP
Sbjct: 542 PNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPNP 601
Query: 761 LIPPIFASDENACCSEWN 778
+IPPIF +DE CSEWN
Sbjct: 602 VIPPIFGTDEFGWCSEWN 619
>gi|345424280|gb|AEN85244.1| phytochrome A, partial [Coincya longirostra]
Length = 595
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/596 (57%), Positives = 444/596 (74%), Gaps = 11/596 (1%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FH+DDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS----------MK 362
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +++ +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHTCHLQYMANMDSIASLVMAVVVNEEEADDSTTETQKRKR 180
Query: 363 LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDML 422
LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 423 LRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTG 482
+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP+E QL +IA WL H D TG
Sbjct: 241 MRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHTDSTG 300
Query: 483 LSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDN 542
LSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+ KD+
Sbjct: 301 LSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDD 360
Query: 543 GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQ 602
+MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +++
Sbjct: 361 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKIIHSKL 420
Query: 603 NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKS 662
N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+GK
Sbjct: 421 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKH 480
Query: 663 LIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKN 722
+ +V + S V+ ++ +AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 FL-TLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHE 539
Query: 723 NVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 NVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 595
>gi|345424400|gb|AEN85304.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 441/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I +QSP+IMDLVKCDGAAL Y + W +GVTP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGITSQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EVKWGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ ++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQFILRNAFKDGETTDVNTTIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424580|gb|AEN85394.1| phytochrome A, partial [Stanleya pinnata]
gi|345424584|gb|AEN85396.1| phytochrome A, partial [Stanleya pinnata]
Length = 597
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/599 (57%), Positives = 445/599 (74%), Gaps = 15/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + A++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVAMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV+ N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHRCHLQYMVNMDSIASLVMAVV-NEEDGEGDAPDSTTPQK 179
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 180 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 239
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP+E L++IA WL NH D
Sbjct: 240 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCENHTD 299
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH+P+
Sbjct: 300 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHNPDD 359
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
+D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ + + + +
Sbjct: 360 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGDTTDVNTKIIH 419
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 420 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 479
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ VV + S V+ ++ AL G E++NV+ +++ + ++VNACTSRD
Sbjct: 480 GKHLL-TVVEDSSVEIVKRMLENALEGIEEQNVQFEIKTHLSSADAGPISLVVNACTSRD 538
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 539 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 597
>gi|345424324|gb|AEN85266.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/599 (57%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTTPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EVKWGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-ALVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424326|gb|AEN85267.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/599 (57%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTSPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EVKWGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424402|gb|AEN85305.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424414|gb|AEN85311.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/598 (57%), Positives = 442/598 (73%), Gaps = 14/598 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TPT+ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424392|gb|AEN85300.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +GVTP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMAT RITSKD +FWFRSHTA EVKWGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMATVRITSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF ++GD +AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTSIEGDCKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424198|gb|AEN85203.1| phytochrome A, partial [Cakile arabica]
gi|345424416|gb|AEN85312.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424424|gb|AEN85316.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP++MDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNVMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424410|gb|AEN85309.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+P DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPTTDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TPT+ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424330|gb|AEN85269.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTSPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EVKWGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CS+WN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSDWN 598
>gi|345424536|gb|AEN85372.1| phytochrome A, partial [Psychine stylosa]
Length = 598
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRS TA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSPTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEATDVNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ VV E S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TVVEESSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424408|gb|AEN85308.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVGV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424194|gb|AEN85201.1| phytochrome A, partial [Cakile arabica]
Length = 598
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPISAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424406|gb|AEN85307.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331095|emb|CAJ80914.1| phytochrome A [Esterhazya campestris]
Length = 606
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/608 (56%), Positives = 447/608 (73%), Gaps = 18/608 (2%)
Query: 178 PFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDT 237
PFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQALP G + LCDT
Sbjct: 1 PFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDT 60
Query: 238 VVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQN 297
+V++V +LTGYDRVM+Y FHDDDHGEV+SEI + LEPY+G+H+PA DIPQAARFLF +N
Sbjct: 61 MVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLFIKN 120
Query: 298 RVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS 357
+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 121 KVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNE 180
Query: 358 KD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQ 405
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q
Sbjct: 181 GNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNREIELENQ 240
Query: 406 LAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQ 465
+ EKNILRTQ LLCDML+RDAP IV+QSP++MDLVKCDGA L Y + + +G+TP++ Q
Sbjct: 241 MLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTPSDFQ 300
Query: 466 LKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTA 525
++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT+ D+LFWFRSHTA
Sbjct: 301 IRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITNTDWLFWFRSHTA 360
Query: 526 KEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSF 585
E++WGGAKH P KD+G KMHPR SFKAFLEVVK RS PW+ E++AIHSLQ+++R++
Sbjct: 361 AEIRWGGAKHEPGEKDDGRKMHPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAS 420
Query: 586 QEMEEENDSKVQG---NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTING 642
+ EE D V+G + + N ++ G+ EL +V EMVRLIETA+ PIF VD G +NG
Sbjct: 421 NKEAEEGD--VEGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNG 478
Query: 643 WNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQ 702
WN K+A+LTGL +A+G + +V + S AV ++ AL G E++NV+ +++ L+
Sbjct: 479 WNTKIADLTGLAVDKAIGTHFL-ALVEDSSAEAVNKMLELALQGNEERNVQFEIKTHGLR 537
Query: 703 KQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLI 762
+ + + ++VNAC SRD K NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ N LI
Sbjct: 538 SESAPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQLI 597
Query: 763 PPIFASDE 770
PPIF +DE
Sbjct: 598 PPIFGTDE 605
>gi|345424334|gb|AEN85271.1| phytochrome A, partial [Didesmus aegyptius]
gi|345424336|gb|AEN85272.1| phytochrome A, partial [Didesmus aegyptius]
gi|345424338|gb|AEN85273.1| phytochrome A, partial [Didesmus bipinnatus]
gi|345424344|gb|AEN85276.1| phytochrome A, partial [Didesmus bipinnatus]
Length = 598
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424526|gb|AEN85367.1| phytochrome A, partial [Muricaria prostrata]
Length = 598
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/599 (57%), Positives = 441/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPNSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP + L++IA WL H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPGDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPGD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
+D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424412|gb|AEN85310.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 441/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V+ V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQKVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+ SPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNASPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TPT+ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424380|gb|AEN85294.1| phytochrome A, partial [Erucaria cakiloidea]
Length = 597
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/598 (57%), Positives = 441/598 (73%), Gaps = 14/598 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDDPDSTSPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EVKWGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALPLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS W+ E++AIHSLQ+++RD+F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLAWKDYEMDAIHSLQLILRDAFKDGETTDVNTNIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G ED+NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEDQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEW
Sbjct: 540 LHGNVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424196|gb|AEN85202.1| phytochrome A, partial [Cakile arabica]
Length = 598
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGY RVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYGRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ ++ LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424340|gb|AEN85274.1| phytochrome A, partial [Didesmus bipinnatus]
Length = 598
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I+ QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIIPQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424420|gb|AEN85314.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++ L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKPSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424418|gb|AEN85313.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FW RSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWVRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424422|gb|AEN85315.1| phytochrome A, partial [Erucaria pinnata]
gi|345424426|gb|AEN85317.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FH DDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHHDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSSAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424378|gb|AEN85293.1| phytochrome A, partial [Erucaria cakiloidea]
Length = 598
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 441/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y F DDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFRDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGNDPDSTSPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLREIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EVKWGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS W+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLAWKDYEMDAIHSLQLILRNAFKDGETTDVNTNIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G ED+NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEDQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331135|emb|CAJ80934.1| phytochrome A [Lindenbergia muraria]
Length = 611
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/609 (55%), Positives = 445/609 (73%), Gaps = 16/609 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ +++D EP K D ++ AGA+QS +LA AI+RLQ+LP G + LCD
Sbjct: 3 KPFYAIIHRVTGSLIVDFEPVKLHDVPMTAAGALQSYELAAKAITRLQSLPSGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+ ++V +LTGYDRVM+Y FHDDDHGEV++EI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMAQEVFELTGYDRVMIYKFHDDDHGEVITEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC + V V+Q L L L STLR+PH CH QYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRSNNVKVVQDGNLPFDLTLCGSTLRAPHSCHAQYMGNMTSIASLVMSVVVN 182
Query: 357 SKDS---------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQ 401
+ +LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E++
Sbjct: 183 EGEEEASSPDSSSSHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHINKEVE 242
Query: 402 VAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTP 461
+ Q+ EKNILRTQ LLCDMLLRDAP +V+QSP+IMDLVKCDGA L Y + G+TP
Sbjct: 243 LENQMLEKNILRTQTLLCDMLLRDAPLGVVSQSPNIMDLVKCDGAMLLYKNEKYRFGLTP 302
Query: 462 TESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFR 521
++ Q++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT D+LFWFR
Sbjct: 303 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITGGDWLFWFR 362
Query: 522 SHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVM 581
SHTA E++WGGAKH KD+GGKMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++
Sbjct: 363 SHTAAEIRWGGAKHELGEKDDGGKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 422
Query: 582 RDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTIN 641
R++ +E E+++ V+ + N ++ G+ EL +V EMVRLIETA+ PIF VD G +N
Sbjct: 423 RNAAREAEKKDWEGVELQARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDGDGLVN 482
Query: 642 GWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFEL 701
GWN K+++LTGLP +A+G + +V + S V ++ A+ G+E++NV+ +++
Sbjct: 483 GWNTKISDLTGLPVDKAIGTHFL-HLVEDSSADTVSKMLELAIQGKEERNVQFEIKTHGP 541
Query: 702 QKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPL 761
+ + + + ++VNAC S+D K NV GVCF+ QDIT EK +MDKF R++GDY AIIQ+ NPL
Sbjct: 542 KSESAPITLIVNACASKDVKENVVGVCFIAQDITTEKSVMDKFTRIEGDYRAIIQNPNPL 601
Query: 762 IPPIFASDE 770
IPPIF +DE
Sbjct: 602 IPPIFGTDE 610
>gi|345424404|gb|AEN85306.1| phytochrome A, partial [Erucaria hispanica]
Length = 597
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/598 (56%), Positives = 441/598 (73%), Gaps = 14/598 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V +V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVREVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424180|gb|AEN85194.1| phytochrome A, partial [Brassica oleracea]
Length = 601
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/602 (56%), Positives = 440/602 (73%), Gaps = 17/602 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDTVV++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGGEGDATAPDSTP 180
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RD P IV+QSP+IMDLVKCDGAAL Y + W +G+TP+E L++IA WL
Sbjct: 241 LLCDMLMRDTPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEY 300
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 361 PVDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTK 420
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK L+ +V + S V+ ++ AL E++NV+ +++ + + ++VNAC
Sbjct: 481 EAIGKHLL-TLVEDSSVEIVKRMLENALERTEEQNVQFEIKTHLSRADAGPISLVVNACA 539
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSE
Sbjct: 540 SRDLHENVAGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSE 599
Query: 777 WN 778
WN
Sbjct: 600 WN 601
>gi|345424260|gb|AEN85234.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLREIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424202|gb|AEN85205.1| phytochrome A, partial [Cakile arctica]
gi|345424206|gb|AEN85207.1| phytochrome A, partial [Cakile constricta]
gi|345424216|gb|AEN85212.1| phytochrome A, partial [Cakile constricta]
gi|345424220|gb|AEN85214.1| phytochrome A, partial [Cakile constricta]
gi|345424224|gb|AEN85216.1| phytochrome A, partial [Cakile edentula]
gi|345424230|gb|AEN85219.1| phytochrome A, partial [Cakile edentula]
gi|345424252|gb|AEN85230.1| phytochrome A, partial [Cakile lanceolata]
gi|345424256|gb|AEN85232.1| phytochrome A, partial [Cakile lanceolata]
gi|345424258|gb|AEN85233.1| phytochrome A, partial [Cakile lanceolata]
gi|345424274|gb|AEN85241.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424328|gb|AEN85268.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTTPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EK+ILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKDILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EVKWGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-ALVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDK R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKLTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377375|gb|ADU05525.1| phytochrome A [Cleome hassleriana]
Length = 598
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 441/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+R Q LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRSQTLPSGSMDRLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEV+SE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC A V V
Sbjct: 61 AYKFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV+ N +
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVFNEDEGEGDVPDSAPPHK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLSQVFAIHVSKELELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TPT+ QL+DIA W+ + H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIWKLGITPTDFQLQDIASWMSDYHRD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLST+SL +AG+PGA LG +VCGMA RITSKD +FWFRSHTA E++WGGAKH P+
Sbjct: 301 STGLSTESLYDAGFPGALALGDSVCGMAAVRITSKDMVFWFRSHTAGEIRWGGAKHDPDE 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ KMHPRSSFKAFLEVVK R PW+ E++AIHSLQ+++R++F+E + + + +
Sbjct: 361 KDDSRKMHPRSSFKAFLEVVKTRCTPWKDYEMDAIHSLQLILRNTFKETDIIDVNTNVLH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VD+ G+INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKLDGIQELEAVTSEMVRLIETATVPILAVDADGSINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKNF-PTLVEDSSVERVKKMLEMALEGTEEQNVQFEIKTHGSRVDAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV QD+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+EWN
Sbjct: 540 LHENVVGVCFVAQDLTAQKNVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 598
>gi|345424524|gb|AEN85366.1| phytochrome A, partial [Muricaria prostrata]
Length = 597
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/598 (57%), Positives = 440/598 (73%), Gaps = 14/598 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPNSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP + L++IA WL H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPGDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPGD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
+D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424428|gb|AEN85318.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FH DDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHHDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP++MDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNVMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTRIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89330104|emb|CAJ80964.1| phytochrome A [Pedicularis kerneri]
Length = 612
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/610 (56%), Positives = 446/610 (73%), Gaps = 17/610 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ +++D EP K + ++ AGA+QS KLA AI+RLQALP G + LCD
Sbjct: 3 KPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV+SEI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKD---------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQ 401
+ +LWGLVVCH+TSPR+IPFPLRYACEFL Q F++ + E++
Sbjct: 183 EGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKEIE 242
Query: 402 VAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTP 461
+ Q EKNILRTQ LLCDMLLRDAP IV++SP++MDLVKC+GA L + + + +G+TP
Sbjct: 243 LENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGMTP 302
Query: 462 TESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFR 521
++ Q++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT +D+LFWFR
Sbjct: 303 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFWFR 362
Query: 522 SHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVM 581
SHTA E++WGGAKH P KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++
Sbjct: 363 SHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLIL 422
Query: 582 R-DSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTI 640
R S +E EE + + + + + N ++ G+ EL +V EMVRLIETA+ PIF V G +
Sbjct: 423 RIASNKEAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDGLV 482
Query: 641 NGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFE 700
NGWN K+A+LTGLP +AMG + +V + S AV ++ AL G E++NV+ + +
Sbjct: 483 NGWNTKIADLTGLPVDKAMGSHFV-ALVDDSSAEAVNKMLELALQGNEEQNVQFEFKTHG 541
Query: 701 LQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNP 760
+ + S V ++VNAC SRD K N+ GVCF+ QDIT +K +MDKF R++GDY+AI+Q+ N
Sbjct: 542 PRSESSPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYKAIVQNPNQ 601
Query: 761 LIPPIFASDE 770
LIPPIF +DE
Sbjct: 602 LIPPIFGTDE 611
>gi|345424262|gb|AEN85235.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDTVV++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
N GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENAVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424332|gb|AEN85270.1| phytochrome A, partial [Didesmus aegyptius]
Length = 597
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/598 (56%), Positives = 442/598 (73%), Gaps = 14/598 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424282|gb|AEN85245.1| phytochrome A, partial [Coincya monensis]
gi|345424284|gb|AEN85246.1| phytochrome A, partial [Coincya monensis]
gi|345424288|gb|AEN85248.1| phytochrome A, partial [Coincya monensis]
Length = 599
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/600 (56%), Positives = 441/600 (73%), Gaps = 15/600 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+L G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 361 --MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLL 418
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 419 CDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG 478
CDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP+E L +IA WL +H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKAWKLGITPSEFHLHEIASWLCESHT 300
Query: 479 DCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE 538
D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 539 HKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG 598
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 599 NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEA 658
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELT LP EA
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTDLPVDEA 480
Query: 659 MGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSR 718
+GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SR
Sbjct: 481 IGKHLL-TLVEDSSVEIVKRMLENALDGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 539
Query: 719 DYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
D NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424192|gb|AEN85200.1| phytochrome A, partial [Cakile arabica]
Length = 598
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSK-------DSM---- 361
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N + DS
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEGGEGDAPDSTAPQK 180
Query: 362 --KLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKN LRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNTLRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHAD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424390|gb|AEN85299.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 441/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++ +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGIMERLCDTMVQEAFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +GVTP++ L++IA L H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASRLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EVKWGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424210|gb|AEN85209.1| phytochrome A, partial [Cakile constricta]
Length = 598
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/599 (56%), Positives = 443/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
G+ L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GRHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424342|gb|AEN85275.1| phytochrome A, partial [Didesmus bipinnatus]
Length = 598
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/598 (56%), Positives = 441/598 (73%), Gaps = 14/598 (2%)
Query: 194 LEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVML 253
EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 61
Query: 254 YNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVI 313
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V+
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 314 QSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------- 360
Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 122 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKR 181
Query: 361 MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCD 420
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLCD
Sbjct: 182 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 241
Query: 421 MLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDC 480
ML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 242 MLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTDS 301
Query: 481 TGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHK 540
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+ K
Sbjct: 302 TGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDDK 361
Query: 541 DNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNT 600
D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + ++
Sbjct: 362 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIHS 421
Query: 601 QQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMG 660
+ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+G
Sbjct: 422 KLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIG 481
Query: 661 KSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDY 720
K L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 482 KHLL-TLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 721 KNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCF D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 541 HENVVGVCFAAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424246|gb|AEN85227.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHT EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTTGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377393|gb|ADU05534.1| phytochrome A [Schizopetalon walkeri]
Length = 599
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/600 (56%), Positives = 440/600 (73%), Gaps = 15/600 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQALP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FH+DDHGEVVSE+ + L+PYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLDPYLGLHYPATDIPQAARFLFIKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSVDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGSGPESTTQPQ 180
Query: 361 --MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLL 418
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ QL EKNILRTQ LL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQLVEKNILRTQTLL 240
Query: 419 CDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG 478
CDML+RDAP IV+QSP++MDLVKCDGAAL Y + W +G+TPTE L++IA WL H
Sbjct: 241 CDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYQDKIWKLGITPTEYHLQEIASWLCEYHT 300
Query: 479 DCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE 538
D TGLSTDSL +AG+P A LG +VCGMA RI+ +D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISPRDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 539 HKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG 598
KD+ +MHPRSSFKAFLEVVK RS PW+ E+NAIHSLQ+++R++F++ E + +
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMNAIHSLQLILRNAFKDSESSDVNAKII 420
Query: 599 NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEA 658
+++ N + G+ EL +V EMVRLI+TAT PI VDS G +NGWN K+AELTGLP EA
Sbjct: 421 HSKLNDLNIDGIQELEAVTSEMVRLIDTATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 659 MGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSR 718
+GK L+ E+V + S V+ ++ AL G E++NV+ +++ + ++ NAC SR
Sbjct: 481 IGKHLL-ELVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHRSGADAGPISLVANACASR 539
Query: 719 DYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
D NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ +PLIPPIF +DE C+EWN
Sbjct: 540 DSCENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPSPLIPPIFGTDEFGWCTEWN 599
>gi|89330114|emb|CAJ80969.1| phytochrome A [Rhinanthus alectorolophus]
Length = 614
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/610 (56%), Positives = 447/610 (73%), Gaps = 17/610 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQAL GG I LC+
Sbjct: 3 KPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERLCE 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM Y FH+DDHGEV++EI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ + L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKDS--------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++
Sbjct: 183 EGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEM 242
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDG+ L + + + +G+TP+
Sbjct: 243 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSILLHKNQKYRLGITPS 302
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
+ Q++DI WL H D TGLSTDSL +AG+PGA LG VCGMA RIT +D+LFWFRS
Sbjct: 303 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWFRS 362
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTA E++WGGAKH +D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R
Sbjct: 363 HTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 422
Query: 583 D-SFQEMEEENDSK-VQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTI 640
+ S +EMEE D + V+ + N ++ GV EL +V EMVRLIETA+ PIF V G +
Sbjct: 423 NASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 482
Query: 641 NGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFE 700
NGWN K+A+LTGLP +A+G + +V E S AV ++ AL G+E++NV +++
Sbjct: 483 NGWNTKIADLTGLPVDKAIGLHFL-SLVEESSAEAVSKMLELALEGKEEQNVHFEIKTHG 541
Query: 701 LQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNP 760
S + ++VNAC SRD++ NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ NP
Sbjct: 542 PNSDSSPISLIVNACASRDFRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPNP 601
Query: 761 LIPPIFASDE 770
+IPPIF +DE
Sbjct: 602 VIPPIFGTDE 611
>gi|89331097|emb|CAJ80915.1| phytochrome A [Euphrasia alsa]
Length = 620
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/618 (55%), Positives = 447/618 (72%), Gaps = 17/618 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AISR Q+LP G + LC+
Sbjct: 3 KPFYAIIHRVTASLIIDFEPIKPHEVPMTAAGALQSYKLASKAISRFQSLPSGSMERLCE 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FH+DDHGEV++EI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKDS--------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + EL++
Sbjct: 183 EGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 242
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGA L + + +G+TP+
Sbjct: 243 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGITPS 302
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
+ Q++DI WL H D TGLSTDSL +AG+PGA LG VCGMA+ +IT +D+LFWFRS
Sbjct: 303 DFQIRDIVSWLDEYHHDSTGLSTDSLYDAGFPGALALGDIVCGMASVKITDRDWLFWFRS 362
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTA E++WGG+KH +D+ KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R
Sbjct: 363 HTASEIRWGGSKHEQGERDDSRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 422
Query: 583 D-SFQEMEEENDSK-VQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTI 640
+ S +EM E D + V+ + N ++ GV EL +V EMVRLIETA+ PIF V G +
Sbjct: 423 NASSKEMGERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 482
Query: 641 NGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFE 700
NGWN K+A LTGLP +A+G + +V E S AV ++ AL G+E++NV ++R
Sbjct: 483 NGWNTKIANLTGLPVDKAIGVHFL-SLVEESSAEAVSKMLELALEGKEEQNVHFEIRTHG 541
Query: 701 LQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNP 760
S + ++VNAC SRD + NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ NP
Sbjct: 542 PNSDSSPISLIVNACASRDVQENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPNP 601
Query: 761 LIPPIFASDENACCSEWN 778
+IPPIF +DE CSEWN
Sbjct: 602 VIPPIFGTDEFGWCSEWN 619
>gi|345424218|gb|AEN85213.1| phytochrome A, partial [Cakile constricta]
Length = 598
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGA L Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAVLLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424582|gb|AEN85395.1| phytochrome A, partial [Stanleya pinnata]
Length = 597
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/598 (56%), Positives = 441/598 (73%), Gaps = 14/598 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
M +RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP+E L++IA WL NH D
Sbjct: 241 GMPMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCENHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH+P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHNPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
+D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ + + + +
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGDTTDVNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+A LTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAVLTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + ++VNACTSRD
Sbjct: 481 GKHLL-TIVEDSSVETVKRMLENALEGTEEQNVQFEIKTHLSSADAGPISLVVNACTSRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|89330106|emb|CAJ80965.1| phytochrome A [Pedicularis tuberosa]
Length = 612
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/610 (55%), Positives = 445/610 (72%), Gaps = 17/610 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ +++D EP K + ++ AGA+QS KLA AI+RLQALP G + LCD
Sbjct: 3 KPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV+SEI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKD---------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQ 401
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E++
Sbjct: 183 EGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIE 242
Query: 402 VAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTP 461
+ Q EKNILRTQ LLCDMLLRDAP IV++SP++MDLVKC+GA L + + + +G+TP
Sbjct: 243 LENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGMTP 302
Query: 462 TESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFR 521
++ Q++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT +D+LFWFR
Sbjct: 303 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFWFR 362
Query: 522 SHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVM 581
SHTA E++WGGAKH P KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++
Sbjct: 363 SHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLIL 422
Query: 582 RD-SFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTI 640
R+ S +E EE + + + + + N ++ G+ EL +V EMVRLIETA+ PIF V G +
Sbjct: 423 RNASNKEAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDGLV 482
Query: 641 NGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFE 700
NGWN K+A+LTGLP +AMG + +V + S AV ++ AL G E++NV+ + +
Sbjct: 483 NGWNTKIADLTGLPVDKAMGSHFV-ALVDDSSAEAVNKMLELALQGNEEQNVQFEFKTHG 541
Query: 701 LQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNP 760
+ + V ++VNAC SRD K N+ GVCF+ QDIT +K +MDKF R++GDY AI+Q+ N
Sbjct: 542 PRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQ 601
Query: 761 LIPPIFASDE 770
LIPPIF +DE
Sbjct: 602 LIPPIFGTDE 611
>gi|345424250|gb|AEN85229.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCD +V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDMMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424214|gb|AEN85211.1| phytochrome A, partial [Cakile constricta]
Length = 598
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVV RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVXTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89330100|emb|CAJ80962.1| phytochrome A [Pedicularis julica]
Length = 612
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/610 (55%), Positives = 444/610 (72%), Gaps = 17/610 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ +++D EP K + ++ AGA+QS KLA AI+RLQALP G + LCD
Sbjct: 3 KPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV+SEI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKD---------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQ 401
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E++
Sbjct: 183 EGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIE 242
Query: 402 VAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTP 461
+ Q EKNILRTQ LLCDMLLRDAP IV++SP++MDLVKC+GA L + + + +G+TP
Sbjct: 243 LENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGMTP 302
Query: 462 TESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFR 521
++ Q++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT +D+LFWFR
Sbjct: 303 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFWFR 362
Query: 522 SHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVM 581
SHTA E++WGGAKH P KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++
Sbjct: 363 SHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLIL 422
Query: 582 RDSFQEMEEENDSKVQG-NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTI 640
R++ + EE D+ + + + N ++ G+ EL +V EMVRLIETA+ PIF V G +
Sbjct: 423 RNASNKQAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDGLV 482
Query: 641 NGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFE 700
NGWN K+A+LTGLP +AMG + +V + S AV ++ AL G E++NV+ + +
Sbjct: 483 NGWNTKIADLTGLPVDKAMGSHFV-ALVDDSSAEAVNKMLELALQGNEEQNVQFEFKTHG 541
Query: 701 LQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNP 760
+ + V ++VNAC SRD K N+ GVCF+ QDIT +K +MDKF R++GDY AI+Q+ N
Sbjct: 542 PRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQ 601
Query: 761 LIPPIFASDE 770
LIPPIF +DE
Sbjct: 602 LIPPIFGTDE 611
>gi|345424212|gb|AEN85210.1| phytochrome A, partial [Cakile constricta]
Length = 597
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/598 (56%), Positives = 442/598 (73%), Gaps = 14/598 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGGCSEW 597
>gi|89330120|emb|CAJ80972.1| phytochrome A [Rhinanthus minor]
Length = 612
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/610 (55%), Positives = 447/610 (73%), Gaps = 17/610 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQAL GG I LC+
Sbjct: 3 KPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERLCE 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM Y FH+DDHGEV++EI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ + L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKDS--------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++
Sbjct: 183 EGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEM 242
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
Q+ EKNILRTQ LLCDMLLRDAP +V+QSP++MDLVKCDG+ L + + + +G+TP+
Sbjct: 243 ENQMLEKNILRTQTLLCDMLLRDAPLGMVSQSPNVMDLVKCDGSILLHKNQKYRLGITPS 302
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
+ Q++DI WL H D TGLSTDSL +AG+PGA LG VCGMA RIT +D+LFWFRS
Sbjct: 303 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWFRS 362
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTA E++WGGAKH +D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R
Sbjct: 363 HTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 422
Query: 583 D-SFQEMEEENDSK-VQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTI 640
+ S +EMEE D + V+ + N ++ GV EL +V EMVRLIETA+ PIF V G +
Sbjct: 423 NASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 482
Query: 641 NGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFE 700
NGWN K+A+LTGLP +A+G + +V E S AV ++ AL G+E++NV +++
Sbjct: 483 NGWNTKIADLTGLPVDKAIGLHFL-SLVEESSAEAVSKMLELALEGKEEQNVHFEIKTHG 541
Query: 701 LQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNP 760
S + ++VNAC SRD++ NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ NP
Sbjct: 542 PNSDSSPISLIVNACASRDFRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPNP 601
Query: 761 LIPPIFASDE 770
+IPPIF +DE
Sbjct: 602 VIPPIFGTDE 611
>gi|345424222|gb|AEN85215.1| phytochrome A, partial [Cakile constricta]
gi|345424228|gb|AEN85218.1| phytochrome A, partial [Cakile edentula]
gi|345424254|gb|AEN85231.1| phytochrome A, partial [Cakile lanceolata]
gi|345424264|gb|AEN85236.1| phytochrome A, partial [Cakile maritima]
Length = 597
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/598 (56%), Positives = 442/598 (73%), Gaps = 14/598 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|89331103|emb|CAJ80918.1| phytochrome A [Euphrasia stricta]
Length = 618
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/618 (55%), Positives = 446/618 (72%), Gaps = 18/618 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AISRLQ+LP G + LC+
Sbjct: 3 KPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERLCE 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FH+DDHGEV++EI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKDS--------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + EL+
Sbjct: 183 EGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELE- 241
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGA L + + +G+TP
Sbjct: 242 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGITPR 301
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
+ Q++DI WL H D GLSTDSL +AG+PGA G VCGMA RIT +D+LFWFRS
Sbjct: 302 DFQIRDIVSWLDEYHRDSRGLSTDSLYDAGFPGALAFGDVVCGMAAVRITDRDWLFWFRS 361
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTA E++WGGAKH +D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R
Sbjct: 362 HTASEIRWGGAKHEQGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 421
Query: 583 D-SFQEMEEENDSK-VQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTI 640
+ S +EMEE D + V+ + N ++ GV EL +V EMVRLIETA+ PIF V G +
Sbjct: 422 NASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 481
Query: 641 NGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFE 700
NGWN K+A+LTGLP +A+G + +V E S AV ++ AL G+E++NV +++
Sbjct: 482 NGWNTKIADLTGLPVDKAIGVHFL-SLVEESSAEAVSKMLELALEGKEEQNVHFEIKTHG 540
Query: 701 LQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNP 760
S + ++VNAC SRD + NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ NP
Sbjct: 541 PNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPNP 600
Query: 761 LIPPIFASDENACCSEWN 778
+IPPIF +DE CSEWN
Sbjct: 601 VIPPIFGTDEFGWCSEWN 618
>gi|89330094|emb|CAJ80959.1| phytochrome A [Pedicularis densispica]
Length = 612
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/610 (55%), Positives = 445/610 (72%), Gaps = 17/610 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ +++D EP K D ++ AGA+QS KLA AI+RLQAL G + LCD
Sbjct: 3 KPFYAIVHRVTGSLIVDFEPVKPHDVPMTAAGALQSYKLAAKAITRLQALSSGSLERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+ ++V +LTGYDRVM+Y FH+DDHGEV+SEI + LEPYLG+H+PA DIPQAARFLF +
Sbjct: 63 TMSQEVFELTGYDRVMIYKFHEDDHGEVLSEITKPGLEPYLGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V+IN
Sbjct: 123 NKVRMICDCRANHVRVIQDDNLHFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVIN 182
Query: 357 SKDS---------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQ 401
+ +LWGLVVCH+T+PR++PFPLRYACEFLVQ F++ + E++
Sbjct: 183 EGNEDEPESSSSSSHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLVQVFAIHVSKEIE 242
Query: 402 VAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTP 461
+ Q EKNILRTQ LLCD+LLRDAP IV++SP++MDLVKC+GA L + + + +G+TP
Sbjct: 243 LENQTLEKNILRTQTLLCDLLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGMTP 302
Query: 462 TESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFR 521
++ Q++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT KD+LFWFR
Sbjct: 303 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFR 362
Query: 522 SHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVM 581
SHTA E++WGGAKH P+ KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++
Sbjct: 363 SHTASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLIL 422
Query: 582 RDSFQEMEEENDSKVQG-NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTI 640
R++ + E +D K + + + NG ++ G+ EL +V EMVRLIETA+ PIF V + G +
Sbjct: 423 RNASNKEAEASDVKGKEIHARLNGLQLDGMQELDAVTSEMVRLIETASVPIFAVGADGLV 482
Query: 641 NGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFE 700
NGWN K+A+LTGLP A G + +V + S AV+ ++ AL G E++NV+ + +
Sbjct: 483 NGWNTKIADLTGLPVDRATGSHFV-SLVDDSSVEAVKKMLELALQGNEEQNVQFEFKTHG 541
Query: 701 LQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNP 760
+ + V ++VNAC SRD K N+ GVCF+ QDIT +K +MDKF R++GDY AI+Q+ N
Sbjct: 542 PRSESGPVSLVVNACASRDLKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQ 601
Query: 761 LIPPIFASDE 770
LIPPIF SDE
Sbjct: 602 LIPPIFGSDE 611
>gi|89331055|emb|CAJ80894.1| phytochrome A [Castilleja crista-galli]
Length = 609
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/609 (55%), Positives = 446/609 (73%), Gaps = 18/609 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQALP G + LCD
Sbjct: 3 KPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV+SEI + L+PY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLFIK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L S LR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVKVIQDDNLPFDLTLCGSNLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAM 404
+ +LWGLVVCH+TSPR+IPFPLRYACEFL Q F++ + E+++
Sbjct: 183 EGNEDGPDSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKEIELEN 242
Query: 405 QLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTES 464
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGA L + + + +G+TP++
Sbjct: 243 QMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILIHKTKKYRLGMTPSDF 302
Query: 465 QLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHT 524
Q++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT D+LFWFRSHT
Sbjct: 303 QIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHT 362
Query: 525 AKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDS 584
A ++WGGAKH P+ KD+G KMHPRSSFKAFL+VVK RS PW+ E++AIHSLQ+++R+S
Sbjct: 363 ASAIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILRNS 422
Query: 585 FQEMEEENDSKVQG---NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTIN 641
+ E+ D V+G + + N ++ G EL +V EMVRLIETA+ PIF VD G +N
Sbjct: 423 SNKEAEKRD--VEGKEIHARLNDLQLDGKKELEAVTSEMVRLIETASVPIFAVDVDGHVN 480
Query: 642 GWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFEL 701
GWN K+A+LTGLP +A+G+ + +V + S AV ++ AL G E++NV+ +++
Sbjct: 481 GWNTKIADLTGLPVDKAIGRHFL-ALVEDSSAEAVNKMLELALQGNEEQNVQFEIKTHGP 539
Query: 702 QKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPL 761
+ + + ++VNAC SRD K NV GVCF+ QD+T +K +MDKF R++GDY AI+Q+ N L
Sbjct: 540 RSESHPISLIVNACASRDVKENVVGVCFIAQDVTTQKSMMDKFTRIEGDYRAIVQNPNQL 599
Query: 762 IPPIFASDE 770
IPPIF +DE
Sbjct: 600 IPPIFGTDE 608
>gi|89331079|emb|CAJ80906.1| phytochrome A [Conopholis alpina]
Length = 605
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/606 (56%), Positives = 447/606 (73%), Gaps = 16/606 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQAL GG + LCD
Sbjct: 3 KPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALRGGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV +EI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V V+Q + L L L STLR+PH CHL YM NM SIASLVM+V+IN
Sbjct: 123 NKVRMICDCRASHVKVVQDENLPFDLTLCGSTLRAPHRCHLLYMENMNSIASLVMSVVIN 182
Query: 357 S-----------KDSMK-LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAM 404
D K LWGL+VCH+TSPR++PFPLRYACEFLVQ F++ + EL++
Sbjct: 183 EGNEDGASSSSGPDKRKTLWGLLVCHNTSPRFVPFPLRYACEFLVQVFAIHVNKELELEN 242
Query: 405 QLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTES 464
Q+ EKNILRTQ LLCD+LLRDAP IV+QSP++MDLVKC GA L Y + +G+TP++
Sbjct: 243 QMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDLVKCIGAVLLYKNTKYRLGLTPSDF 302
Query: 465 QLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHT 524
Q++DI WL H D TGLSTDSL +AG+PGA LG A+CGMA RIT +D+LFWFRSHT
Sbjct: 303 QIRDIVSWLDEYHWDSTGLSTDSLYDAGFPGALALGDALCGMAAVRITDRDWLFWFRSHT 362
Query: 525 AKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDS 584
A E++WGG KH P+ KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++
Sbjct: 363 AAEIQWGGMKHEPDEKDDGSKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNA 422
Query: 585 FQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWN 644
F+E E + ++ + + N ++ GV E+ +VA EMVRLIETA+ PIF VD G +NGWN
Sbjct: 423 FKESEGRD---LEIHARLNELQIGGVREIEAVATEMVRLIETASVPIFAVDVDGLVNGWN 479
Query: 645 AKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQ 704
K+A+LTGL ++AMG + +V + S V ++ AL G+E++NV+ +++ +
Sbjct: 480 TKIADLTGLCVNKAMGSHFL-ALVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQNSE 538
Query: 705 HSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPP 764
+ ++VNAC SRD K NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ NPLIPP
Sbjct: 539 SGPITLMVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPP 598
Query: 765 IFASDE 770
IF +DE
Sbjct: 599 IFGTDE 604
>gi|345424244|gb|AEN85226.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALERTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424266|gb|AEN85237.1| phytochrome A, partial [Cakile maritima]
Length = 597
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/598 (56%), Positives = 442/598 (73%), Gaps = 14/598 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALSYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|89331083|emb|CAJ80908.1| phytochrome A [Cordylanthus ramosus]
Length = 609
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/607 (56%), Positives = 444/607 (73%), Gaps = 14/607 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQALP G + LCD
Sbjct: 3 KPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV+SEI + L+PY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLFIK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM +M SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVKVIQDNNLPFDLTLCGSTLRAPHSCHLQYMESMNSIASLVMSVVVN 182
Query: 357 SKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAM 404
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++
Sbjct: 183 EGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIELEN 242
Query: 405 QLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTES 464
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGA L + + + +G+TP++
Sbjct: 243 QMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIHKSKKYRLGMTPSDF 302
Query: 465 QLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHT 524
Q++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT D+LFWFRSHT
Sbjct: 303 QIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHT 362
Query: 525 AKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDS 584
A E++WGGAKH P KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R+S
Sbjct: 363 ASEIRWGGAKHEPSDKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNS 422
Query: 585 F-QEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGW 643
+E EE + + + + N ++ G EL ++ EMVRLIETA+ PIF VD G +NGW
Sbjct: 423 SNKEAEERDVGGKEIHARLNDLQLDGKQELEALTSEMVRLIETASVPIFAVDMDGLVNGW 482
Query: 644 NAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQK 703
N K+A+LTGL +A+G L+ +V + S AV ++ AL G E++NV+ ++ +
Sbjct: 483 NTKIADLTGLLVDKAIGMHLL-ALVEDSSAEAVNKMLELALQGNEEQNVQFDIKTHGPRS 541
Query: 704 QHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIP 763
+ + ++VNAC SRD K NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ N LIP
Sbjct: 542 ESGPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQLIP 601
Query: 764 PIFASDE 770
PIF SDE
Sbjct: 602 PIFGSDE 608
>gi|345424200|gb|AEN85204.1| phytochrome A, partial [Cakile arctica]
Length = 597
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/598 (56%), Positives = 441/598 (73%), Gaps = 14/598 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
NV GVCFV D+T +K +MDKF R++GDY+AI Q+ NPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIFQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424360|gb|AEN85284.1| phytochrome A, partial [Eruca pinnatifida]
Length = 599
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/600 (57%), Positives = 444/600 (74%), Gaps = 15/600 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGEAPDSTTAPQ 180
Query: 361 --MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLL 418
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 419 CDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG 478
CDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 479 DCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE 538
D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 539 HKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG 598
+D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F+E E + +
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGETADMNTKII 420
Query: 599 NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEA 658
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 659 MGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSR 718
+GK L+ +V + S G V+ ++ AL G E++NV+ +++ + + ++VNAC SR
Sbjct: 481 IGKHLL-TLVEDSSVGIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 539
Query: 719 DYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
D NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|89330154|emb|CAJ80989.1| phytochrome A [Triphysaria pusilla]
Length = 609
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/609 (56%), Positives = 443/609 (72%), Gaps = 18/609 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQALP G + LCD
Sbjct: 3 KPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV+SEI + L+ Y G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDSYAGLHYPATDIPQAARFLFIK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAM 404
D +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++
Sbjct: 183 EGDEDGPNSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIELEN 242
Query: 405 QLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTES 464
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGA L + + + +G+TP++
Sbjct: 243 QMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIHKTKKYRLGMTPSDF 302
Query: 465 QLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHT 524
Q++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT D+LFWFRSHT
Sbjct: 303 QIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHT 362
Query: 525 AKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDS 584
A E++WGGAKH P+ KD+G KMHPRSSFKAFL+VVK RS PW+ E++AIHSLQ+++R+S
Sbjct: 363 ASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILRNS 422
Query: 585 FQEMEEENDSKVQG---NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTIN 641
+ E+ D V G + + N ++ G EL +V EMVRLIETA+ PIF VD G +N
Sbjct: 423 SNKEAEKRD--VDGKEIHARLNDLQLDGKRELEAVTSEMVRLIETASVPIFAVDVDGLVN 480
Query: 642 GWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFEL 701
GWN K+A+LTGLP +A+GK + +V + AV ++ AL G E++NV+ +++
Sbjct: 481 GWNTKIADLTGLPVDKAIGKHFL-ALVEDSFAEAVNKMLGSALQGNEEQNVQFEIKTHGP 539
Query: 702 QKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPL 761
+ + + ++VNAC SRD K NV GVCF+ QDIT + +MDKF R++GDY AI+Q+ N L
Sbjct: 540 KSDSNPISLIVNACASRDVKENVVGVCFIAQDITTQISMMDKFTRIEGDYRAIVQNPNQL 599
Query: 762 IPPIFASDE 770
IPPIF SDE
Sbjct: 600 IPPIFGSDE 608
>gi|345424204|gb|AEN85206.1| phytochrome A, partial [Cakile arctica]
gi|345424232|gb|AEN85220.1| phytochrome A, partial [Cakile edentula]
gi|345424236|gb|AEN85222.1| phytochrome A, partial [Cakile edentula]
gi|345424240|gb|AEN85224.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGL EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424512|gb|AEN85360.1| phytochrome A, partial [Morisia monanthos]
Length = 598
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/599 (56%), Positives = 445/599 (74%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L + L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSSDITLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDASDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIALWLCECHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
+D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G++NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC S+D
Sbjct: 481 GKHLL-TIVEDSSVDIVKRMLENALEGTEEQNVQFEIKTHLSRTDAGPISLVVNACASKD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE+ CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 598
>gi|89331069|emb|CAJ80901.1| phytochrome A [Castilleja fissifolia]
Length = 609
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/609 (55%), Positives = 447/609 (73%), Gaps = 18/609 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQALP G + LCD
Sbjct: 3 KPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV+SEI + L+PY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLFIK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L S R+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVKVIQDDNLPFDLTLCGSNPRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAM 404
+ +LWGLVVCH+TSPR+IPFPLRYACEFL Q F++ + E+++
Sbjct: 183 EGNEDGPDSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFTIHVNKEIELEN 242
Query: 405 QLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTES 464
Q+ EKNILRTQ LLCDMLLRDAP IV++SP++MDLVKCDGA L + + + +G+TP++
Sbjct: 243 QMLEKNILRTQTLLCDMLLRDAPLGIVSRSPNVMDLVKCDGAVLIHKTKKYRLGMTPSDF 302
Query: 465 QLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHT 524
Q++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT D+LFWFRSHT
Sbjct: 303 QIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHT 362
Query: 525 AKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDS 584
A E++WGGAKH P+ KD+G KMHPRSSFKAFL+VVK RS PW+ E++AIHSL++++R+S
Sbjct: 363 ASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLRLILRNS 422
Query: 585 FQEMEEENDSKVQG---NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTIN 641
+ E+ D V+G + + N ++ G EL +V EMVRLIETA+ PIF VD G +N
Sbjct: 423 SNKEAEKRD--VEGKEIHARLNDLQLDGKKELETVTSEMVRLIETASVPIFAVDVDGHVN 480
Query: 642 GWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFEL 701
GWN K+A+LTGLP +A+G+ + +V + S AV ++ AL G E++NV+ +++
Sbjct: 481 GWNTKIADLTGLPVDKAIGRHFL-ALVEDSSAEAVNKMLELALQGNEEQNVQFEIKTHGP 539
Query: 702 QKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPL 761
+ + + ++VNACTSRD K NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ N L
Sbjct: 540 RSESHPISLIVNACTSRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQL 599
Query: 762 IPPIFASDE 770
IPPIF +DE
Sbjct: 600 IPPIFGTDE 608
>gi|89330118|emb|CAJ80971.1| phytochrome A [Rhinanthus glacialis]
Length = 614
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/610 (55%), Positives = 445/610 (72%), Gaps = 17/610 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQAL GG I LC+
Sbjct: 3 KPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERLCE 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM Y FH+DDHGEV++EI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ + L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKDS--------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E ++
Sbjct: 183 EGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKETEM 242
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDG+ L + + + +G+TP+
Sbjct: 243 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSILLHKNQKYRLGITPS 302
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
+ Q++DI WL H D TGLSTDSL +AG+PGA LG VCGMA RIT +D+LFWFRS
Sbjct: 303 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWFRS 362
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTA E++WGGAKH +D+G KMHPRSSFKAFLEVVK RS PW+ E++A HSLQ+++R
Sbjct: 363 HTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDATHSLQLILR 422
Query: 583 D-SFQEMEEENDSK-VQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTI 640
+ S +EMEE D + V+ + N ++ GV EL +V EMVRLIETA+ PIF V G +
Sbjct: 423 NASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 482
Query: 641 NGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFE 700
NGWN K+A+LTGLP +A+G + +V E S AV ++ AL G+E++NV +++
Sbjct: 483 NGWNTKIADLTGLPVDKAIGLHFL-SLVEESSAEAVSKMLELALEGKEEQNVHFEIKTHG 541
Query: 701 LQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNP 760
S + ++VNAC SRD++ NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ NP
Sbjct: 542 PNSDSSPISLIVNACASRDFRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPNP 601
Query: 761 LIPPIFASDE 770
+IPPIF +DE
Sbjct: 602 VIPPIFGTDE 611
>gi|345424348|gb|AEN85278.1| phytochrome A, partial [Diplotaxis harra]
gi|345424350|gb|AEN85279.1| phytochrome A, partial [Diplotaxis harra]
Length = 599
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/600 (57%), Positives = 443/600 (73%), Gaps = 15/600 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTAPQ 180
Query: 361 --MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLL 418
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 419 CDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG 478
CDML+RDAP IVTQSP+IMDLVKCDGAAL Y + W +G+TP+E L++IA WL H
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGITPSEYHLQEIASWLCEYHT 300
Query: 479 DCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE 538
D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 539 HKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG 598
+D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F+E E + +
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEPTDVNANII 420
Query: 599 NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEA 658
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 659 MGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSR 718
+GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SR
Sbjct: 481 IGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 539
Query: 719 DYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
D NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424516|gb|AEN85362.1| phytochrome A, partial [Morisia monanthos]
Length = 598
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/599 (56%), Positives = 445/599 (74%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L + L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSSDITLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDASDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIALWLCECHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
+D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N K+ G+ EL +V EMVRLIETAT PI VDS G++NGWN K+AELTGLP EA+
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC S+D
Sbjct: 481 GKHLL-TIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRTDAGPISLVVNACASKD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE+ CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 598
>gi|345424242|gb|AEN85225.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/599 (56%), Positives = 442/599 (73%), Gaps = 14/599 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAEHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGL EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADVGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424226|gb|AEN85217.1| phytochrome A, partial [Cakile edentula]
Length = 596
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/597 (56%), Positives = 441/597 (73%), Gaps = 14/597 (2%)
Query: 195 EPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y
Sbjct: 1 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAY 60
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V+Q
Sbjct: 61 KFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVLQ 120
Query: 315 SKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------M 361
++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 DEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKRK 180
Query: 362 KLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDM 421
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLCDM
Sbjct: 181 RLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDM 240
Query: 422 LLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCT 481
L+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D T
Sbjct: 241 LMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTDST 300
Query: 482 GLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKD 541
GLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+ KD
Sbjct: 301 GLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDDKD 360
Query: 542 NGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ 601
+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +++
Sbjct: 361 DARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIHSK 420
Query: 602 QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGK 661
N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGLP EA+GK
Sbjct: 421 LNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAIGK 480
Query: 662 SLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYK 721
L+ + + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 HLL-TLAEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLH 539
Query: 722 NNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 ENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 596
>gi|89331137|emb|CAJ80935.1| phytochrome A [Lindenbergia philippensis]
Length = 609
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/608 (55%), Positives = 443/608 (72%), Gaps = 16/608 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ +VID EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCD
Sbjct: 3 KPFYAIIHRVTGSLVIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDD GEV++EI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDRGEVLTEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC AI V V+Q L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRAINVKVVQDGNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKDS--------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
D +LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++
Sbjct: 183 EGDEEASTPDSSLHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHINKEVEL 242
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
Q+ EKNIL+TQ LLCDMLLRDAP IV QSP+IMDLVKCDGA + Y + + G+ P
Sbjct: 243 ENQMLEKNILKTQTLLCDMLLRDAPLGIVNQSPNIMDLVKCDGAMMLYKNQKYRFGLAPN 302
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
+ Q++D+ WL HGD TGLSTDSL +AG+PGA LG AVCGMA RIT KD+LFWFRS
Sbjct: 303 DFQIRDLVSWLDAYHGDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFRS 362
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTA E++WGGAKH KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R
Sbjct: 363 HTAAEIRWGGAKHERGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 422
Query: 583 DSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTING 642
++ +E ++++ ++ + + N ++ G+ EL V EMVRLIETA+ PIF VD G +NG
Sbjct: 423 NASREADKKDLEGMEIHARLNDLQIDGIQEL-EVTSEMVRLIETASVPIFAVDGDGLVNG 481
Query: 643 WNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQ 702
WN K+A+L GLP +A+G +D +V + S V ++ A+ G E++NV+ +++ +
Sbjct: 482 WNTKIADLAGLPVEKAIGMHFLD-LVEDSSADTVGKMLKLAIQGVEERNVQFEIKTHGPR 540
Query: 703 KQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLI 762
+ + ++VNAC S+D K NV GVCF+ QDIT EK +MDKF R++GDY AIIQ+ NPLI
Sbjct: 541 SDSTPISLVVNACASKDVKENVVGVCFIAQDITTEKSVMDKFTRIEGDYRAIIQNPNPLI 600
Query: 763 PPIFASDE 770
PPIF DE
Sbjct: 601 PPIFGIDE 608
>gi|89330096|emb|CAJ80960.1| phytochrome A [Pedicularis foliosa]
Length = 611
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/609 (56%), Positives = 442/609 (72%), Gaps = 16/609 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ +++D EP K + ++ AGA+QS KLA AI+RLQALP G + LCD
Sbjct: 3 KPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV+SEI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKD--------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E ++
Sbjct: 183 EGNEDGPDSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEFEL 242
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
Q EKNILRTQ LLCDMLLRDAP IV++SP++MDLVKC+GA L + + + +G+TP+
Sbjct: 243 ENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGMTPS 302
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
+ Q++DI WL H D TGLSTDSL +AG PGA LG AVCGMA RIT +D+LFWFRS
Sbjct: 303 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGLPGALALGDAVCGMAAVRITDEDWLFWFRS 362
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTA E++WGGAKH P KD+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+V+R
Sbjct: 363 HTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLVLR 422
Query: 583 D-SFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTIN 641
+ S +E EE + + + + N ++ G+ EL +V EMVRLIETA+ PIF V G +N
Sbjct: 423 NASNKEAEERDTNGKEIHAGLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDGLVN 482
Query: 642 GWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFEL 701
GWN K+A+LTGLP +AMG + +V + S AV ++ AL G E++NV+ + +
Sbjct: 483 GWNTKIADLTGLPVDKAMGSHFV-ALVDDSSAEAVNRMLELALQGNEEQNVQFEFKTHGP 541
Query: 702 QKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPL 761
+ + V ++VNAC SRD K N+ GVCF+ QDIT +K +MDKF R++GDY AI+Q+ N L
Sbjct: 542 RSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQL 601
Query: 762 IPPIFASDE 770
IPPIF +DE
Sbjct: 602 IPPIFGTDE 610
>gi|345424286|gb|AEN85247.1| phytochrome A, partial [Coincya monensis]
Length = 599
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/600 (56%), Positives = 439/600 (73%), Gaps = 15/600 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI RLQ+L G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAIIRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 361 --MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLL 418
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 419 CDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG 478
CDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G+TP+E L +IA WL +H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKAWKLGITPSEFHLHEIASWLCESHT 300
Query: 479 DCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE 538
D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 539 HKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG 598
KD+ +MHPRSSFKA LEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 361 DKDDARRMHPRSSFKALLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 599 NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEA 658
+++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELT LP EA
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTDLPVDEA 480
Query: 659 MGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSR 718
+GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SR
Sbjct: 481 IGKHLL-TLVEDSSVEIVKRMLENALDGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 539
Query: 719 DYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
D NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424500|gb|AEN85354.1| phytochrome A, partial [Kremeriella cordylocarpus]
Length = 595
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 444/596 (74%), Gaps = 11/596 (1%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS----------MK 362
+Q ++L L L STLR+PH CHLQYM+NM SIASLVMAV++N +D+ +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMSNMDSIASLVMAVVVNEEDADDSTTQTQKRKR 180
Query: 363 LWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDML 422
LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 423 LRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTG 482
+RDAP IV+QSP++MDLVKCDGAAL Y + W +G+TP+E L++IA WL H D TG
Sbjct: 241 MRDAPLGIVSQSPNVMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTDSTG 300
Query: 483 LSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDN 542
LSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+ +D+
Sbjct: 301 LSTDSLHDAGFPRALALGDSVCGMAAVRISSKDVIFWFRSHTAGEVRWGGAKHDPDDRDD 360
Query: 543 GGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQ 602
+MHPRSSFKAFLEVVK RS PW+ E++A+HSLQ+++R++F++ E + + ++
Sbjct: 361 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAVHSLQLILRNAFKDGETTDVNTKIIYSKL 420
Query: 603 NGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKS 662
N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA+GK
Sbjct: 421 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKH 480
Query: 663 LIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKN 722
L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 LL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHE 539
Query: 723 NVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 540 NVAGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 595
>gi|345424372|gb|AEN85290.1| phytochrome A, partial [Eruca vesicaria]
Length = 592
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/595 (57%), Positives = 437/595 (73%), Gaps = 12/595 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------MKL 363
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D +L
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDEPESATPQKRKRL 180
Query: 364 WGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLL 423
WGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLCDML+
Sbjct: 181 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDMLM 240
Query: 424 RDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGL 483
RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL H D TGL
Sbjct: 241 RDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTGL 300
Query: 484 STDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNG 543
STDSL +AG+P LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+ KD+
Sbjct: 301 STDSLHDAGFPRD--LGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDDA 358
Query: 544 GKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQN 603
+MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F+E E + + +++ N
Sbjct: 359 RRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGETTDVNTKIIHSKLN 418
Query: 604 GSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSL 663
K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGL A+GK L
Sbjct: 419 DLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDGAIGKHL 478
Query: 664 IDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNN 723
+ +V + S V+ ++ AL G E++NV+ ++ + + +VNAC SRD N
Sbjct: 479 L-TLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASRDLHEN 537
Query: 724 VKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
V GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE CSEWN
Sbjct: 538 VVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 592
>gi|345424272|gb|AEN85240.1| phytochrome A, partial [Cakile maritima]
Length = 597
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/598 (56%), Positives = 441/598 (73%), Gaps = 14/598 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 361 -MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLC 419
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 420 DMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGD 479
DML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP++ L++IA WL H D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 480 CTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEH 539
TGLSTDSL +AG+P A LG +VCGMA RI+S+D +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 540 KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGN 599
KD+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + + +
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 600 TQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAM 659
++ N ++ G+ EL +V EMVRLIETAT PI VDS G INGWN K+AELTGL EA+
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 660 GKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRD 719
GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SRD
Sbjct: 481 GKHLL-TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 539
Query: 720 YKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEW
Sbjct: 540 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424168|gb|AEN85188.1| phytochrome A, partial [Brassica nigra]
Length = 599
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/600 (57%), Positives = 443/600 (73%), Gaps = 15/600 (2%)
Query: 193 DLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVM 252
D EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 253 LYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMV 312
Y FHDDDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 313 IQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------ 360
+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTAPQ 180
Query: 361 --MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLL 418
+LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ LL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLTQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 419 CDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG 478
CDML+RDAP I++QSP+IMDLVKCDGAAL Y + W +G+TP+E L++IA WL H
Sbjct: 241 CDMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHT 300
Query: 479 DCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE 538
D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 539 HKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG 598
+D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 599 NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEA 658
+++ N K+ GV EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGLP EA
Sbjct: 421 HSKLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 659 MGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSR 718
+GK L+ +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC SR
Sbjct: 481 IGKHLL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 539
Query: 719 DYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWN 778
D NV GVCFV D+T +K +MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN
Sbjct: 540 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|89331063|emb|CAJ80898.1| phytochrome A [Castilleja miniata]
Length = 609
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/609 (55%), Positives = 445/609 (73%), Gaps = 18/609 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AI+RLQALP G + LCD
Sbjct: 3 KPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERLCD 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV+SEI + L+PY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLFIK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L S LR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVKVIQDDNLPFDLTLCGSNLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAM 404
+ +LWGLVVCH+TSPR+IPFPLRYACEFL Q F++ + E+++
Sbjct: 183 EGNEDGPNSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKEIELEN 242
Query: 405 QLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTES 464
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGA L + + + +G+TP++
Sbjct: 243 QMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILIHKTKKYRLGMTPSDF 302
Query: 465 QLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHT 524
Q++DI WL H D TGLSTDSL +AG+PGA LG AVCGMA RIT D+LFWFRSHT
Sbjct: 303 QIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHT 362
Query: 525 AKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDS 584
A ++WGGAKH P+ KD+G KMHPRSSFKAFL+VVK RS W+ E++AIHSLQ+++R+S
Sbjct: 363 ASTIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLSWKDFEMDAIHSLQLILRNS 422
Query: 585 FQEMEEENDSKVQG---NTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTIN 641
+ E+ D V+G + + N ++ G EL +V EMVRLIETA+ PIF VD G +N
Sbjct: 423 SSKEAEKGD--VEGKEIHARLNDLQLDGKKELEAVTSEMVRLIETASVPIFAVDVDGHVN 480
Query: 642 GWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFEL 701
GWN K+A+LTGLP +A+G+ + +V + S AV ++ AL G E++NV+ +++
Sbjct: 481 GWNTKIADLTGLPVDKAIGRHFL-ALVEDSSAEAVNKMLELALQGNEEQNVQFEIKTHGP 539
Query: 702 QKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPL 761
+ + + ++VNAC SRD K NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ N L
Sbjct: 540 RSESHPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQL 599
Query: 762 IPPIFASDE 770
IPPIF +DE
Sbjct: 600 IPPIFGTDE 608
>gi|89330090|emb|CAJ80957.1| phytochrome A [Parentucellia viscosa]
Length = 610
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/608 (56%), Positives = 446/608 (73%), Gaps = 15/608 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ +++D EP K + ++ AGA+QS KLA AISRLQ+LP G + LC+
Sbjct: 3 KPFYAIIHRVTASLIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERLCE 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FHDDDHGEV++EI + LEPY+G+H+PA DIPQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHDDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLFMR 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ + L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKD------------SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAM 404
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + EL++
Sbjct: 183 EGNEEAGPDELSQHLKRRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELEN 242
Query: 405 QLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTES 464
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGA L + + +G+TP++
Sbjct: 243 QMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKDQKHRLGITPSDF 302
Query: 465 QLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHT 524
Q++DI WL H D TGLSTDSL +AG+PGA LG VCGMA RIT +D+LFWFRSHT
Sbjct: 303 QIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDIVCGMAAVRITDRDWLFWFRSHT 362
Query: 525 AKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRD- 583
A E++WGGAKH +D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R+
Sbjct: 363 ASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNA 422
Query: 584 SFQEMEEENDSK-VQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTING 642
S +EMEE D + V+ + N ++ GV EL +V EMVRLIETA+ PI V G +NG
Sbjct: 423 SSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPILAVGVDGLVNG 482
Query: 643 WNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQ 702
W+ K+A+LTGLP +A+G + +V E S AV ++ AL G+E++NV +++
Sbjct: 483 WDTKIADLTGLPVDKAIGVHFL-SLVEESSTEAVGKMLELALEGKEEQNVHFEIKNHGPN 541
Query: 703 KQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLI 762
S + ++VNAC+SRD + NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ NP+I
Sbjct: 542 SDSSPISLIVNACSSRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPNPVI 601
Query: 763 PPIFASDE 770
PPIF +DE
Sbjct: 602 PPIFGTDE 609
>gi|89331099|emb|CAJ80916.1| phytochrome A [Euphrasia collina]
Length = 621
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/618 (55%), Positives = 444/618 (71%), Gaps = 17/618 (2%)
Query: 177 KPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCD 236
KPFYAI+HR+ ++ID EP K + ++ AGA+QS KLA AISR Q+LP G + LC+
Sbjct: 3 KPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRFQSLPSGSMERLCE 62
Query: 237 TVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
T+V++V +LTGYDRVM+Y FH+DDHGEV++EI + LEPY+G+H+PA D+PQAARFLF +
Sbjct: 63 TMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDVPQAARFLFMK 122
Query: 297 NRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIIN 356
N+VRMICDC A V VIQ L L L STLR+PH CHLQYM NM SIASLVM+V++N
Sbjct: 123 NKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVN 182
Query: 357 SKDS--------------MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQV 402
+ +LWGLVVCH+TSPR++PFPLRYACEFL Q F++ + EL++
Sbjct: 183 EGNEEAGPDNSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 242
Query: 403 AMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPT 462
Q+ EKNILRTQ LLCDMLLRDAP IV+QSP++MDLVKCDGA L + + +G+TP+
Sbjct: 243 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGITPS 302
Query: 463 ESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRS 522
+ Q++DI WL D TGLSTDSL +AG+PGA LG VCGMA +IT +D+LFWFRS
Sbjct: 303 DFQIRDIVSWLDEYRHDSTGLSTDSLYDAGFPGALSLGDNVCGMAAVKITDRDWLFWFRS 362
Query: 523 HTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMR 582
HTA E++WGG+KH +D+ KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R
Sbjct: 363 HTASEIRWGGSKHEQGERDDSRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 422
Query: 583 D-SFQEMEEEND-SKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTI 640
+ S +EM E D V+ + N ++ GV EL +V EMVRLIETA+ PIF V G +
Sbjct: 423 NASSKEMGERKDLESVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 482
Query: 641 NGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFE 700
NGWN K+A LTGLP +A+G + +V E S AV ++ AL G+E++NV +++
Sbjct: 483 NGWNTKIANLTGLPVDKAIGVHFL-SLVEESSAEAVSKMLELALEGKEEQNVHFEIKTHG 541
Query: 701 LQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNP 760
S + ++VNAC SRD + NV GVCF+ QDIT +K +MDKF R++GDY AI+Q+ NP
Sbjct: 542 PNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPNP 601
Query: 761 LIPPIFASDENACCSEWN 778
+IPPIF +DE CSEWN
Sbjct: 602 VIPPIFGTDEFGWCSEWN 619
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,646,701,277
Number of Sequences: 23463169
Number of extensions: 611090653
Number of successful extensions: 1440395
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5327
Number of HSP's successfully gapped in prelim test: 2401
Number of HSP's that attempted gapping in prelim test: 1415514
Number of HSP's gapped (non-prelim): 11847
length of query: 959
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 806
effective length of database: 8,769,330,510
effective search space: 7068080391060
effective search space used: 7068080391060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)