BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002152
(959 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P55004|PHYE_IPONI Phytochrome E OS=Ipomoea nil GN=PHYE PE=2 SV=1
Length = 1115
Score = 1416 bits (3665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/935 (73%), Positives = 787/935 (84%), Gaps = 6/935 (0%)
Query: 25 SDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYL 84
S + +N GK I YNADA L+AEFEQS SGKSF+YSRSVI P+ V EE++TAYL
Sbjct: 11 SSSATSNLNTGKAIA-QYNADAKLMAEFEQSRESGKSFDYSRSVIHAPQNVTEEEMTAYL 69
Query: 85 SKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGLIGIDARTLFT 144
S+IQRGGLIQPFGCMLA+EEP+F+I+G+SENC ++L L+S E E LIGIDARTLFT
Sbjct: 70 SRIQRGGLIQPFGCMLAIEEPSFKIVGFSENCFDLLGLKSGVEPPERMSLIGIDARTLFT 129
Query: 145 PPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPAL 204
S ASLAKA ASREISLLNPI VHS +KPFYA+LHRIDVGIVIDLEP+ S DPAL
Sbjct: 130 LSSRASLAKAVASREISLLNPIWVHSKIN--QKPFYAVLHRIDVGIVIDLEPANSADPAL 187
Query: 205 SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEV 264
LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQKLTGYDRVM+Y FHDD HGEV
Sbjct: 188 LLAGAVQSQKLAVRAISRLQSLPGGDIGTLCDTVVEDVQKLTGYDRVMVYKFHDDSHGEV 247
Query: 265 VSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCL 324
VSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+Q +ELKQPLCL
Sbjct: 248 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKVLQCEELKQPLCL 307
Query: 325 VNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYA 384
VNSTLRSPHGCH +YM NMGSIASLVMAV+INS +SMKLWGLVVCHHTSPRY+PFPLRYA
Sbjct: 308 VNSTLRSPHGCHTKYMANMGSIASLVMAVVINSSESMKLWGLVVCHHTSPRYVPFPLRYA 367
Query: 385 CEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCD 444
CEFL+QAFSLQLYMELQ+A QLAEK IL+TQ LLCDMLLRDAPF IVTQ+PSIMDLV+CD
Sbjct: 368 CEFLMQAFSLQLYMELQLASQLAEKKILQTQTLLCDMLLRDAPFGIVTQTPSIMDLVRCD 427
Query: 445 GAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVC 504
GAALYY G+CWL+GVTPTE+Q+KDIA WLL+NHGD TGLSTD L++AGYPGA LLG AV
Sbjct: 428 GAALYYNGKCWLLGVTPTETQVKDIAEWLLHNHGDSTGLSTDCLSDAGYPGAPLLGDAVS 487
Query: 505 GMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSF 564
GMATARITSKDFLFWFRSHTAKEVKWGGAKHHPE KD+GG+MHPRSSF AFLEVVK+RS
Sbjct: 488 GMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFIAFLEVVKSRSL 547
Query: 565 PWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLI 624
PWE SEINAIHSLQ++MRDS Q + EN K + QQN S ELSS+A E+VRL+
Sbjct: 548 PWEDSEINAIHSLQLIMRDSLQGI-GENYMKSVSSPQQNDSDGVRFYELSSMALELVRLV 606
Query: 625 ETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRAL 684
ETAT PIFGVDSSG INGWNAK+AELTGL A+ A+GK LID+V HE+S + L+CRAL
Sbjct: 607 ETATVPIFGVDSSGLINGWNAKIAELTGLQANVAIGKYLIDDVTHEDSHETFKALMCRAL 666
Query: 685 LGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKF 744
GEED+NVE+KL KF VVY++VNACTSRDYKN++ GVCFVGQDIT EK +MDKF
Sbjct: 667 QGEEDRNVEVKLLKFGNHPTKEVVYLVVNACTSRDYKNDIIGVCFVGQDITPEKAVMDKF 726
Query: 745 IRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN 804
+RLQGDYEAIIQS+NPLIPPIFASDENACCSEWNAAME++TG ++ EVIGK LP EIFG
Sbjct: 727 VRLQGDYEAIIQSLNPLIPPIFASDENACCSEWNAAMERLTGLVKCEVIGKRLPGEIFGG 786
Query: 805 FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGC 864
CR+KGQD LTKFMILLYQGI+G TE FGFF+R+G F++V +TA++RTD G +IGC
Sbjct: 787 LCRLKGQDALTKFMILLYQGISGHDTEKLSFGFFDRKGNFIDVFITANKRTDERGNIIGC 846
Query: 865 FCFMQILVPDLQPALEAQGLE-DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
FCF+Q + D P + A+ +E D + + +KE AYI+Q++KNPLNGIRF HKLLE + S
Sbjct: 847 FCFLQTMAVD-HPQISARDIEDDRECLSTLKEFAYIQQQMKNPLNGIRFTHKLLEGTVTS 905
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCV 958
++Q+Q+LETS+ACE+QI++II+ MD I +G V
Sbjct: 906 DHQKQFLETSEACEKQILSIIENMDSGGIVDGNRV 940
>sp|P42498|PHYE_ARATH Phytochrome E OS=Arabidopsis thaliana GN=PHYE PE=1 SV=2
Length = 1112
Score = 1328 bits (3438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/945 (68%), Positives = 766/945 (81%), Gaps = 29/945 (3%)
Query: 24 SSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAY 83
S+ + MKP K+ Y+ DA L A+F QS+ +GKSFNYS+SVISPP VP+E ITAY
Sbjct: 8 SAASNMKP-QPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNHVPDEHITAY 66
Query: 84 LSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDL-----RSRSEDFE-LNGLIGI 137
LS IQRGGL+QPFGC++AVEEP+FRI+G S+N + L L S S +F+ + GLIGI
Sbjct: 67 LSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLLSLPSTSHSGEFDKVKGLIGI 126
Query: 138 DARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPS 197
DARTLFTP SGASL+KAA+ EISLLNP+LVH SR+ +KPFYAILHRID GIV+DLEP+
Sbjct: 127 DARTLFTPSSGASLSKAASFTEISLLNPVLVH--SRTTQKPFYAILHRIDAGIVMDLEPA 184
Query: 198 KSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFH 257
KSGDPAL+LAGAVQSQKLAV AISRLQ+LPGGDIG LCDTVVEDVQ+LTGYDRVM+Y FH
Sbjct: 185 KSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFH 244
Query: 258 DDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKE 317
+DDHGEVVSEIRRSDLEPYLG+H+PA DIPQAARFLFKQNRVRMICDC+A PV V+QS+E
Sbjct: 245 EDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEE 304
Query: 318 LKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYI 377
LK+PLCLVNSTLR+PHGCH QYM NMGS+ASL +A+++ KDS KLWGLVV HH SPRY+
Sbjct: 305 LKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSSKLWGLVVGHHCSPRYV 364
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QLAEK +RTQ LLCDMLLRD +IVTQSP I
Sbjct: 365 PFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSPGI 424
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHG-DCTGLSTDSLAEAGYPGA 496
MDLVKCDGAALYY G+CWLVGVTP ESQ+KD+ WL+ NHG D TGL+TDSL +AGYPGA
Sbjct: 425 MDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLVDAGYPGA 484
Query: 497 ALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFL 556
LG AVCG+A A +SKD+L WFRS+TA +KWGGAKHHP+ KD+ G+MHPRSSF AFL
Sbjct: 485 ISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDDAGRMHPRSSFTAFL 544
Query: 557 EVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSV 616
EV K+RS PWE+SEI+AIHSL+++MR+SF + + GN + +EL+S
Sbjct: 545 EVAKSRSLPWEISEIDAIHSLRLIMRESFT----SSRPVLSGN-----GVARDANELTSF 595
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
CEMVR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL DE+V EES+ A+
Sbjct: 596 VCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLADEIVQEESRAAL 655
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQH----SVVYILVNACTSRDYKNNVKGVCFVGQ 732
E+L+C+AL GEE+K+V LKLRKF Q H S V +LVN+CTSRDY N+ GVCFVGQ
Sbjct: 656 ESLLCKALQGEEEKSVMLKLRKFG-QNNHPDYSSDVCVLVNSCTSRDYTENIIGVCFVGQ 714
Query: 733 DITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEV 792
DIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDENACCSEWNAAMEK+TGW +HEV
Sbjct: 715 DITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHEV 774
Query: 793 IGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVALTA 851
IGKMLP E+FG FC++K QD LTKF+I LYQGI G E+ FFN++G+++E +LTA
Sbjct: 775 IGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFFNKEGKYIEASLTA 834
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++ T+ EGKVI CF F+QI+ + + L L++ + EL Y+RQE+KNPLNGIR
Sbjct: 835 NKSTNIEGKVIRCFFFLQII--NKESGLSCPELKES--AQSLNELTYVRQEIKNPLNGIR 890
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGR 956
F HKLLESS IS +QRQ+LETSDACE+QI TII+ DL+ IEEG+
Sbjct: 891 FAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEEGK 935
>sp|Q41046|PHY_PINSY Phytochrome OS=Pinus sylvestris PE=2 SV=1
Length = 1131
Score = 1293 bits (3347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/934 (67%), Positives = 753/934 (80%), Gaps = 20/934 (2%)
Query: 37 TIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPF 96
T + YN+DA LL FEQS SGKSF+Y+RS+ VPE+QITAYLS+IQRGG IQPF
Sbjct: 32 TAMAQYNSDARLLQVFEQSGESGKSFDYTRSIQVHNRAVPEQQITAYLSRIQRGGRIQPF 91
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGL-IGIDARTLFTPPSGASL 151
GC+LAVEE TFRII YSEN EMLDL ++S E + + L IG D RTLFT S SL
Sbjct: 92 GCVLAVEETTFRIIAYSEN-EEMLDLGAQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSL 150
Query: 152 AKAAASREISLLNPILVH-SNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
KAA ++EISL+NPI VH NSR KPFYAI+HRIDVG+VIDLEP ++GD +S AGAV
Sbjct: 151 EKAAVAQEISLMNPIWVHCKNSR---KPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAV 207
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQ+LP GD+GLLCDTVVE+V++LTGYDRVM+Y FH+D+HGEVV+EIRR
Sbjct: 208 QSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRR 267
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF QNRVRMICDC A PV VIQS+EL QPLCLV ST
Sbjct: 268 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTPS 327
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGLVVCHHTSPRYIPFPL 381
+PHGCH QYM NMGSI SL+MAVIIN D SMKLWGLVVCHHTSPR +PFPL
Sbjct: 328 APHGCHAQYMANMGSIRSLLMAVIINGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPL 387
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
RYACEFL+QA LQL MELQ+A QL EK+ILRTQ LLCDMLLRDAP IVTQSPSI DLV
Sbjct: 388 RYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLV 447
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAALYYGG CW++GVTPTE+Q+KDIA WLL +HGD TGLSTDSLA+AGYPGAA LG
Sbjct: 448 KCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGD 507
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
AVCGMA+ARITSKDFLFWFRSHTAKE+KWGGAKHHP+ KD+ +MHPRSSFKAFLEVVK
Sbjct: 508 AVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKR 567
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PW+ EI+AIHSLQ+++R SF+++++ +K +++ N ++QG+DELSSVA EMV
Sbjct: 568 RSLPWDNVEIDAIHSLQLILRCSFRDIDDSG-TKTMVHSRLNYLRLQGIDELSSVASEMV 626
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETATAPI VD +G +NGWNAKVAELTGLP EAMG SL+ ++V E+S VE ++
Sbjct: 627 RLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLH 686
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLM 741
AL GEE+KNVE+ L+ F QK+ V ++VNAC+SRD+ +N+ GVCFVGQD+T +KV+M
Sbjct: 687 NALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVM 746
Query: 742 DKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREI 801
DKFIR+QGDY +I+QS NPLIPPIFASDE ACCSEWNAAMEKVTGW EVIGKML EI
Sbjct: 747 DKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEI 806
Query: 802 FGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKV 861
FG CR+KGQD +TKF I+L+Q GQ E FPF FF++QG++VE LTA++RTDA+G++
Sbjct: 807 FGGCCRLKGQDAVTKFTIVLHQCNHGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRI 866
Query: 862 IGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSS 921
G FCF +I +LQ ALE Q ++ +A++KELAYIRQE+KNPL G+ F KLLE +
Sbjct: 867 TGSFCFFRIASSELQHALEVQRQQEKKCFARLKELAYIRQEIKNPLYGMMFTRKLLEETD 926
Query: 922 ISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+S++Q+Q++ETS CERQ+ ++D MDL +E+G
Sbjct: 927 LSDDQKQFVETSAVCERQMQKVMDDMDLESLEDG 960
>sp|P34094|PHYB_SOLTU Phytochrome B OS=Solanum tuberosum GN=PHYB PE=3 SV=2
Length = 1130
Score = 1288 bits (3333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/930 (66%), Positives = 742/930 (79%), Gaps = 17/930 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y ADA L A FEQS SGK F+YS+SV + + VPE QITAYL+KIQRGG IQPFGC
Sbjct: 35 IAQYTADARLHAVFEQSGESGKFFDYSQSVKTTTQSVPERQITAYLTKIQRGGHIQPFGC 94
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
M+AV+E +FR+I YSEN EML L +S E E+ IG D RTLFTP S L +A
Sbjct: 95 MIAVDEASFRVIAYSENACEMLSLTPQSVPSLEKCEIL-TIGTDVRTLFTPSSSVLLERA 153
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+REI+LLNPI +HS + KPFYAILHR+DVGIVIDLEP+++ DPALS+AGAVQSQK
Sbjct: 154 FGAREITLLNPIWIHSKNSG--KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQK 211
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LAV AIS LQ+LPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E +RSDLE
Sbjct: 212 LAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLE 271
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV V Q + L QPLCLV STLR+PHG
Sbjct: 272 PYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHG 331
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD---------SMKLWGLVVCHHTSPRYIPFPLRYAC 385
CH QYM NMGSIASL +AVIIN D SM+LWGLVV HHTS R IPFPLRYAC
Sbjct: 332 CHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYAC 391
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDG
Sbjct: 392 EFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDG 451
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALYY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSL +AGYPGAA LG AVCG
Sbjct: 452 AALYYQGKYYPLGVTPTEAQIKDIVEWLLAYHGDSTGLSTDSLPDAGYPGAASLGDAVCG 511
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS P
Sbjct: 512 MAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSSP 571
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
WE +E++AIHSLQ+++RDSF++ E N SK + ++QG+DELSSVA EMVRLIE
Sbjct: 572 WENAEMDAIHSLQLILRDSFKDAEASN-SKAIVHAHLGEMELQGIDELSSVAREMVRLIE 630
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TATAPIF VD G INGWNAKVAELTG+ EAMGKSL+ ++V++ESQ E L+ AL
Sbjct: 631 TATAPIFAVDVEGRINGWNAKVAELTGVSVEEAMGKSLVHDLVYKESQETAEKLLYNALR 690
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
GEEDKNVE+KLR F ++ V+++VNAC S+DY NN+ GVCFVGQD+T EKV+MDKFI
Sbjct: 691 GEEDKNVEIKLRTFGAEQLEKAVFVVVNACASKDYTNNIVGVCFVGQDVTGEKVVMDKFI 750
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF 805
+QGDY+AI+ S NPLIPPIFASDEN CCSEWN AMEK+TGW R E++GKML EIFG+
Sbjct: 751 NIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEIVGKMLVGEIFGSC 810
Query: 806 CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCF 865
CR+KG D +TKFMI+L+ I GQ T+ FPF FF+R G++V+ LTA++R + EG IG F
Sbjct: 811 CRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAF 870
Query: 866 CFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN 925
CF+QI P+LQ AL Q ++ Y+++KELAYI QE+K+PLNGIRF + LLE+++++EN
Sbjct: 871 CFIQIASPELQQALRVQRQQEKKCYSQMKELAYICQEIKSPLNGIRFTNSLLEATNLTEN 930
Query: 926 QRQYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+QYLETS ACERQ+ II +DL IE+G
Sbjct: 931 QKQYLETSAACERQMSKIIRDIDLENIEDG 960
>sp|P29130|PHYB_TOBAC Phytochrome B OS=Nicotiana tabacum GN=PHYB PE=2 SV=2
Length = 1132
Score = 1273 bits (3295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/930 (66%), Positives = 743/930 (79%), Gaps = 18/930 (1%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGV-PEEQITAYLSKIQRGGLIQPFG 97
I Y ADA L A FEQS SGKSF+YS+S+ + + V PE+QITAYL+KIQRGG IQPFG
Sbjct: 38 IAQYTADARLHAVFEQSGESGKSFDYSQSIKTTTQSVVPEQQITAYLTKIQRGGHIQPFG 97
Query: 98 CMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAK 153
CM+AV+E +FR+I YSEN EML L +S E E+ +G D RTLFTP S L +
Sbjct: 98 CMIAVDEASFRVIAYSENACEMLSLTPQSVPSLERPEIL-TVGTDVRTLFTPSSSVLLER 156
Query: 154 AAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQ 213
A +REI+LLNPI +HS + KPFYAILHR+DVGIVIDLEP+++ DPALS+AGAVQSQ
Sbjct: 157 AFGAREITLLNPIWIHSKNSG--KPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQ 214
Query: 214 KLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDL 273
KLAV AIS LQ+LPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E + DL
Sbjct: 215 KLAVRAISHLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKIPDL 274
Query: 274 EPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPH 333
EPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV V+Q + L QPLCLV STLR+PH
Sbjct: 275 EPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVVQDESLMQPLCLVGSTLRAPH 334
Query: 334 GCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLVVCHHTSPRYIPFPLRYAC 385
GCH QYM NMGSIASL +AVIIN D SM+LWGLVV HHTS R IPFPLRYAC
Sbjct: 335 GCHAQYMANMGSIASLTLAVIINGNDEEAVGGRSSMRLWGLVVGHHTSARCIPFPLRYAC 394
Query: 386 EFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDG 445
EFL+QAF LQL MELQ+A QL+EK++LRTQ LLCDMLLRD+P IV QSPSIMDLVKCDG
Sbjct: 395 EFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVIQSPSIMDLVKCDG 454
Query: 446 AALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCG 505
AALY G+ + +GVTPTE+Q+KDI WLL HGD TGLSTDSLA+AGYPGAALLG AVCG
Sbjct: 455 AALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGLSTDSLADAGYPGAALLGDAVCG 514
Query: 506 MATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFP 565
MA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVVK+RS P
Sbjct: 515 MAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLP 574
Query: 566 WEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIE 625
WE +E++AIHSL +++RDSF++ E N SK + Q ++QG+DELSSVA EMVRLIE
Sbjct: 575 WENAEMDAIHSL-LILRDSFKDAEASN-SKAVVHAQLGEMELQGIDELSSVAREMVRLIE 632
Query: 626 TATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALL 685
TATAPIF VD G INGWNAKVAELT L EAMGKSL+ ++VH+ESQ E L+ AL
Sbjct: 633 TATAPIFAVDVEGRINGWNAKVAELTDLSVEEAMGKSLVHDLVHKESQETAEKLLFNALR 692
Query: 686 GEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFI 745
GEEDKNVE+KLR F ++ V+++VNAC+S+DY NN+ GVCFVGQD+T +KV+MDKFI
Sbjct: 693 GEEDKNVEIKLRTFGPEQLKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFI 752
Query: 746 RLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNF 805
+QGDY+AI+ S NPLIPPIFASDEN CCSEWN AMEK+TGW R E+IGKML EIFG+
Sbjct: 753 HIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEIIGKMLVGEIFGSC 812
Query: 806 CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCF 865
CR+KG D +TKFMI+L+ I Q T+ FPF FF+R G++V+ LTA++R + EG++IG F
Sbjct: 813 CRLKGPDAMTKFMIVLHNAIGVQDTDKFPFSFFDRNGKYVQALLTANKRVNMEGQIIGAF 872
Query: 866 CFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISEN 925
CF+QI P+LQ AL Q ++ Y+++KELAY+ QE+K+PLNGIRF + LLE++ ++EN
Sbjct: 873 CFIQIASPELQQALRVQRQQEKKCYSQMKELAYLCQEIKSPLNGIRFTNSLLEATDLTEN 932
Query: 926 QRQYLETSDACERQIMTIIDGMDLRCIEEG 955
Q+QYLETS ACERQ+ II +DL IE+G
Sbjct: 933 QKQYLETSAACERQMSKIIRDVDLENIEDG 962
>sp|Q9ZS62|PHYB1_SOLLC Phytochrome B1 OS=Solanum lycopersicum GN=PHYB1 PE=2 SV=1
Length = 1131
Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/954 (64%), Positives = 748/954 (78%), Gaps = 19/954 (1%)
Query: 17 HNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPE 73
HN++ ++ + +N +I I Y ADA L A FEQS SGKSF+YS+SV + +
Sbjct: 12 HNSSQGQAQSSGTSNMNYKDSISKAIAQYTADARLHAVFEQSGESGKSFDYSQSVKTTTQ 71
Query: 74 GVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFE 130
VPE QITAYL+KIQRGG IQPFGCM+AV+E +FRII YSEN EML L +S D
Sbjct: 72 SVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRIIAYSENACEMLSLTPQSVPSLDKS 131
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+G D RTLFTP S L +A +REI+LLNPI +HS + KPFYAILHR+DVGI
Sbjct: 132 EILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSG--KPFYAILHRVDVGI 189
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
VIDLEP+++ DPALS+AGAVQSQKLAV AIS LQ+LPGGDI LLCDTVVE V++LTGYDR
Sbjct: 190 VIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDR 249
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM+Y FH+D+HGEVV+E +RSDLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA PV
Sbjct: 250 VMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPV 309
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD---------SM 361
V Q + L QPLCLV STLR+PHGCH QYM NMGSIASL +AVIIN D SM
Sbjct: 310 RVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNSM 369
Query: 362 KLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDM 421
+LWGLVV HHTS R IPFPLRYACEFL+QAF LQL MELQ+A QL+EK++LRTQ LLCDM
Sbjct: 370 RLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDM 429
Query: 422 LLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCT 481
LLRD+P IVTQSPSIMDLVKCDGAALYY + + +GVTPTE+Q+KDI WLL HGD T
Sbjct: 430 LLRDSPPGIVTQSPSIMDLVKCDGAALYYQRKYYPLGVTPTEAQIKDIVEWLLAYHGDST 489
Query: 482 GLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKD 541
GLSTDSLA+AGYPGAA LG AVCGMA A ITSKDFLFWFRSHTAKE+KWGGAKHHPE KD
Sbjct: 490 GLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKD 549
Query: 542 NGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ 601
+G +MHPRSSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ E N +
Sbjct: 550 DGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASNSKAIVHALG 609
Query: 602 QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGK 661
+ ++QG+DELSSVA EMVRLIETATAPIFGVD +G INGWN KV ELTGL A EA GK
Sbjct: 610 E--MELQGIDELSSVAREMVRLIETATAPIFGVDVNGRINGWNEKVVELTGLSAEEAKGK 667
Query: 662 SLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYK 721
SL+ +++++ESQ + E L+ AL G E KNVE+KLR F ++ V+++VNAC+SRDY
Sbjct: 668 SLVHDLLYKESQESAEKLLYNALRGVEGKNVEIKLRTFGAEQVEKAVFLVVNACSSRDYT 727
Query: 722 NNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAM 781
N++ GV FVGQD+T EK++MDKFI +QGDY+AI+ S NPLIPPIFASDEN CSEWN AM
Sbjct: 728 NSIVGVSFVGQDVTGEKIVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTSCSEWNTAM 787
Query: 782 EKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQ 841
EK++GW R E++GKML EIFG+ CR+KG D +TKFMI+L+ I GQ T+ FPF FF+R
Sbjct: 788 EKLSGWSREEIVGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRN 847
Query: 842 GQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQ 901
G++V+ LTA++R + EG IG FCF+QI P+LQ AL Q ++ Y+++KELAYI Q
Sbjct: 848 GKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYICQ 907
Query: 902 EVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
EVK+PLNGIRF + LLE+++++E Q+QYLETS ACERQ+ II +DL IE+G
Sbjct: 908 EVKSPLNGIRFTNSLLEATNLTEYQKQYLETSAACERQMSKIIRDVDLENIEDG 961
>sp|A2XFW2|PHYB_ORYSI Phytochrome B OS=Oryza sativa subsp. indica GN=PHYB PE=3 SV=2
Length = 1171
Score = 1253 bits (3241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>sp|Q10MG9|PHYB_ORYSJ Phytochrome B OS=Oryza sativa subsp. japonica GN=PHYB PE=2 SV=1
Length = 1171
Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/945 (64%), Positives = 737/945 (77%), Gaps = 26/945 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+Y++S+ + P E+QI AYLS+IQRGG IQPFGC
Sbjct: 62 VAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQIAAYLSRIQRGGHIQPFGC 121
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL-------IGIDARTLFTPPSGAS 150
LAV ++ +FR++ YSEN ++LDL L+ +G DAR LF P S
Sbjct: 122 TLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPSSAVL 181
Query: 151 LAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAV 210
L +A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAV
Sbjct: 182 LERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAV 239
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QSQKLAV AISRLQALPGGD+ LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 240 QSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAESRR 299
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
++LEPY+G+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ L QPLCLV STLR
Sbjct: 300 NNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGSTLR 359
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVVCHHTSPRYI 377
SPHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR I
Sbjct: 360 SPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMKLWGLVVCHHTSPRCI 419
Query: 378 PFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSI 437
PFPLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSI
Sbjct: 420 PFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSI 479
Query: 438 MDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAA 497
MDLVKCDGAALYY G+ + +GVTPTE Q+KDI WL HGD TGLSTDSLA+AGYPGAA
Sbjct: 480 MDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYPGAA 539
Query: 498 LLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLE 557
LG AV GMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLE
Sbjct: 540 ALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 599
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELS 614
VVK+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G+DELS
Sbjct: 600 VVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGIDELS 659
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
SVA EMVRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+
Sbjct: 660 SVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEE 719
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V L+ RAL G+EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+
Sbjct: 720 TVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDV 779
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWN AMEK+TGW R EV+G
Sbjct: 780 TGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVG 839
Query: 795 KMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRR 854
K+L E+FGN CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R
Sbjct: 840 KLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTR 899
Query: 855 TDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVH 914
+ +G+ IG FCF+QI P+LQ A E Q + YA++KELAYI QE+KNPLNGIRF +
Sbjct: 900 SRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIKNPLNGIRFTN 959
Query: 915 KLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
LLE + + ++QRQ+LETS ACE+Q+ I+ L+ IE+G V
Sbjct: 960 SLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVL 1004
>sp|P14713|PHYB_ARATH Phytochrome B OS=Arabidopsis thaliana GN=PHYB PE=1 SV=1
Length = 1172
Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/974 (62%), Positives = 749/974 (76%), Gaps = 28/974 (2%)
Query: 9 TTNSIGGGHNTTPFKSSDAKMKPVNKGKTI---IDHYNADAGLLAEFEQSVASGKSFNYS 65
T N+ GG S ++P + +++ I Y DA L A FEQS SGKSF+YS
Sbjct: 27 TPNNRRGGEQAQ--SSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYS 84
Query: 66 RSVISPPEG--VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLR 123
+S+ + G VPE+QITAYLS+IQRGG IQPFGCM+AV+E +FRIIGYSEN EML +
Sbjct: 85 QSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIM 144
Query: 124 SRS----EDFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPF 179
+S E E+ + G D R+LFT S L +A +REI+LLNP+ +HS ++ KPF
Sbjct: 145 PQSVPTLEKPEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHS--KNTGKPF 201
Query: 180 YAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVV 239
YAILHRIDVG+VIDLEP+++ DPALS+AGAVQSQKLAV AIS+LQALPGGDI LLCDTVV
Sbjct: 202 YAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVV 261
Query: 240 EDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRV 299
E V+ LTGYDRVM+Y FH+D+HGEVV+E +R DLEPY+G+H+PA DIPQA+RFLFKQNRV
Sbjct: 262 ESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRV 321
Query: 300 RMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-- 357
RMI DC+A PV+V+Q L Q +CLV STLR+PHGCH QYM NMGSIASL MAVIIN
Sbjct: 322 RMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNE 381
Query: 358 ---------KDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAE 408
+ SM+LWGLVVCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A+Q++E
Sbjct: 382 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSE 441
Query: 409 KNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKD 468
K +LRTQ LLCDMLLRD+P IVTQSPSIMDLVKCDGAA Y G+ + +GV P+E Q+KD
Sbjct: 442 KRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKD 501
Query: 469 IAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEV 528
+ WLL NH D TGLSTDSL +AGYPGAA LG AVCGMA A IT +DFLFWFRSHTAKE+
Sbjct: 502 VVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEI 561
Query: 529 KWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEM 588
KWGGAKHHPE KD+G +MHPRSSF+AFLEVVK+RS PWE +E++AIHSLQ+++RDSF+E
Sbjct: 562 KWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKES 621
Query: 589 EEENDSKVQGNTQQNGSKM---QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNA 645
E +SKV Q M QG+DEL +VA EMVRLIETAT PIF VD+ G INGWNA
Sbjct: 622 EAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNA 681
Query: 646 KVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQH 705
K+AELTGL EAMGKSL+ +++++E++ V L+ RAL G+E+KNVE+KL+ F + Q
Sbjct: 682 KIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQG 741
Query: 706 SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPI 765
V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPI
Sbjct: 742 KAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPI 801
Query: 766 FASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGI 825
FA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FG+ C +KG D LTKFMI+L+ I
Sbjct: 802 FAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAI 861
Query: 826 TGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLE 885
GQ T+ FPF FF+R G+FV+ LTA++R EGKVIG FCF+QI P+LQ AL Q +
Sbjct: 862 GGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQ 921
Query: 886 DMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIID 945
D + + K KELAYI Q +KNPL+G+RF + LLE++ ++E+Q+Q LETS +CE+QI I+
Sbjct: 922 DTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVG 981
Query: 946 GMDLRCIEEGRCVF 959
MDL IE+G V
Sbjct: 982 DMDLESIEDGSFVL 995
>sp|P93527|PHYB_SORBI Phytochrome B OS=Sorghum bicolor GN=PHYB PE=3 SV=2
Length = 1178
Score = 1247 bits (3227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/943 (63%), Positives = 739/943 (78%), Gaps = 24/943 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
+ Y DA L A FEQS ASG+SF+YS+S+ +PP E+QI AYLS+IQRGG IQPFGC
Sbjct: 71 VAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPFGC 130
Query: 99 MLAV-EEPTFRIIGYSENCLEMLDLRSRSEDFELNGL------IGIDARTLFTPPSGASL 151
LAV ++ +FR++ +SEN ++LDL L+ +G DAR LF+P S L
Sbjct: 131 TLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPSSAVLL 190
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
+A A+REISLLNP+ +HS R KPFYAILHRIDVG+VIDLEP+++ DPALS+AGAVQ
Sbjct: 191 ERAFAAREISLLNPLWIHS--RVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 248
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
SQKLAV AISRLQALPGGDI LLCDTVVE V++LTGYDRVM+Y FH+D+HGEVV+E RR
Sbjct: 249 SQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAESRRD 308
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
+LEPYLG+H+PA DIPQA+RFLF+QNRVRMI DCHA PV VIQ + QPLCLV STLR+
Sbjct: 309 NLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGSTLRA 368
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPF 379
PHGCH QYM NMGSIASLVMAVII+S +MKLWGLVVCHHTSPR IPF
Sbjct: 369 PHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHTSPRCIPF 428
Query: 380 PLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMD 439
PLRYACEFL+QAF LQL MELQ+A QL+EK+ILRTQ LLCDMLLRD+P IVTQSPSIMD
Sbjct: 429 PLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMD 488
Query: 440 LVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALL 499
LVKCDGAALYY G+ + +GVTPTESQ+KDI WL HGD TGLSTDSLA+AGY GAA L
Sbjct: 489 LVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGAAAL 548
Query: 500 GQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVV 559
G AVCGMA A IT D+LFWFRSHTAKE+KWGGAKHHPE KD+G +MHPRSSFKAFLEVV
Sbjct: 549 GDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 608
Query: 560 KNRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSK--VQGNTQQNGSKMQGVDELSSV 616
K+RS PWE +E++AIHSLQ+++RDSF++ E ++SK V G Q +++G++ELSSV
Sbjct: 609 KSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRGINELSSV 668
Query: 617 ACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAV 676
A EMVRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES+ V
Sbjct: 669 AREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEEIV 728
Query: 677 ENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITH 736
E L+ RAL GEEDKNVE+KL+ F ++ + ++++VNAC+SRDY N+ GVCFVGQD+T
Sbjct: 729 EKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQDVTG 788
Query: 737 EKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKM 796
+KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CSEWN AMEK+TGW R EV+GK
Sbjct: 789 QKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVVGKF 848
Query: 797 LPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTD 856
L E+FG+FCR+KG D LTKFM++++ I GQ E FPF FF++ G++V+ LTA+ R+
Sbjct: 849 LIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANTRSK 908
Query: 857 AEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKL 916
+GK IG FCF+QI ++Q A E Q ++ YA++KELAYI QE+KNPL+GIRF + L
Sbjct: 909 MDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSL 968
Query: 917 LESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEGRCVF 959
L+ + ++++QRQ+LET ACE Q+ I+ L+ IE+G V
Sbjct: 969 LQMTDLNDDQRQFLETCSACEEQMSKIVKDATLQSIEDGSLVL 1011
>sp|P42497|PHYD_ARATH Phytochrome D OS=Arabidopsis thaliana GN=PHYD PE=1 SV=2
Length = 1164
Score = 1217 bits (3148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/938 (62%), Positives = 728/938 (77%), Gaps = 23/938 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPP--EGVPEEQITAYLSKIQRGGLIQPF 96
I Y DA L A FEQS SGKSF+YS+S+ + P VPE+QITAYLS+IQRGG QPF
Sbjct: 60 IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPF 119
Query: 97 GCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLA 152
GC++AVEE TF IIGYSEN EML L S+S ED IG D R+LF S L
Sbjct: 120 GCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLE 179
Query: 153 KAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQS 212
+A +REI+LLNPI +HSN+ KPFYAILHR+DVGI+IDLEP+++ DPALS+AGAVQS
Sbjct: 180 RAFVAREITLLNPIWIHSNNTG--KPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQS 237
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
QKLAV AIS LQ+LP GDI LLCDTVVE V+ LTGYDRVM+Y FH+D+HGEVV+E +R+D
Sbjct: 238 QKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRND 297
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
LEPY+G+H+PA DIPQA+RFLFKQNRVRMI DC+A PV V+Q L Q +CLV STLR+P
Sbjct: 298 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLRAP 357
Query: 333 HGCHLQYMTNMGSIASLVMAVIINS------------KDSMKLWGLVVCHHTSPRYIPFP 380
HGCH QYMTNMGSIASL MAVIIN ++SM+LWGLVVCHHTS R IPFP
Sbjct: 358 HGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFP 417
Query: 381 LRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDL 440
LRYACEFL+QAF LQL MELQ+A+Q++EK +LR Q LLCDMLLRD+P IVTQ PSIMDL
Sbjct: 418 LRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDL 477
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLG 500
VKC+GAA Y G+ + +GVTPT+SQ+ DI WL+ NH D TGLSTDSL +AGYP AA LG
Sbjct: 478 VKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAALG 537
Query: 501 QAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVK 560
AVCGMA A IT +DFLFWFRSHT KE+KWGGAKHHPE KD+G +M+PRSSF+ FLEVVK
Sbjct: 538 DAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVK 597
Query: 561 NRSFPWEVSEINAIHSLQIVMRDSFQEMEE-ENDSKVQGNTQQNGSKM--QGVDELSSVA 617
+R PWE +E++AIHSLQ+++RDSF+E E ++ + G Q +G M QG+ E+ +VA
Sbjct: 598 SRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVA 657
Query: 618 CEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVE 677
EMVRLIETAT PIF VD G INGWNAK+AELTGL +AMGKSL+ E++++E + V+
Sbjct: 658 REMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVD 717
Query: 678 NLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHE 737
L+ AL G+E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T
Sbjct: 718 RLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGH 777
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGK+L
Sbjct: 778 KIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLL 837
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDA 857
RE+FG++CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R
Sbjct: 838 VREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSI 897
Query: 858 EGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLL 917
+GK+IG FCF+QI P+LQ ALE Q ++ + +++ KELAYI Q +KNPL+G+RF + LL
Sbjct: 898 DGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLL 957
Query: 918 ESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E ++E+Q+Q LETS +CE+QI I+ MD++ I++G
Sbjct: 958 EDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDG 995
>sp|Q01549|PHY1_SELMA Phytochrome 1 OS=Selaginella martensii GN=PHY1 PE=3 SV=1
Length = 1134
Score = 1199 bits (3103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/948 (62%), Positives = 721/948 (76%), Gaps = 30/948 (3%)
Query: 33 NKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQR 89
+K + ADA L A +E+S SG SF+YS+S+ S E +P + +TAYL ++QR
Sbjct: 16 SKHSVRVAQTTADAKLHAVYEESGESGDSFDYSKSINATKSTGETIPAQAVTAYLQRMQR 75
Query: 90 GGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNG-----LIGIDARTLFT 144
GGL+QPFGCMLAVEE +FR+I +S+N EMLDL +S +G IG DARTLFT
Sbjct: 76 GGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGSGQQDVLTIGTDARTLFT 135
Query: 145 PPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPAL 204
+ A A A ++S+LNPI V S + + KPFYAI+HRIDVG+V+DLEP K+ D +
Sbjct: 136 AAASALEKAAGAV-DLSMLNPIWVQSKTSA--KPFYAIVHRIDVGLVMDLEPVKASDTRV 192
Query: 205 -SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGE 263
S AGA+QS KLA AISRLQ+LPGGDIGLLCDTVVE+V+ +TGYD VM Y FH+D+HGE
Sbjct: 193 GSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRDVTGYDLVMAYKFHEDEHGE 252
Query: 264 VVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLC 323
VV+EIRRSDLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC A PV + Q KEL+QP+
Sbjct: 253 VVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAPPVKITQDKELRQPIS 312
Query: 324 LVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------------SMKLWGLVVCH 370
L STLR+PHGCH QYM NMGS+ASLVMA+IIN D +LWGLVVCH
Sbjct: 313 LAGSTLRAPHGCHAQYMGNMGSVASLVMAMIINDNDEPSGGGGGGGQHKGRRLWGLVVCH 372
Query: 371 HTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSI 430
HTSPR +PF LR ACEFL+Q F LQL ME VA + EK+ILRTQ LLCDMLLRDAP I
Sbjct: 373 HTSPRSVPF-LRSACEFLMQVFGLQLNMEAAVAAHVREKHILRTQTLLCDMLLRDAPIGI 431
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
V+QSP+IMDLVKCDGAALYYG R WL+G+TP+E+Q+KDIA WLL +H D TGLSTDSLA+
Sbjct: 432 VSQSPNIMDLVKCDGAALYYGKRFWLLGITPSEAQIKDIAEWLLEHHKDSTGLSTDSLAD 491
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRS 550
AGYPGAA LG VCGMA A+IT+KDFLFWFRSHTAKEVKWGGAKH P+ KD+G KMHPRS
Sbjct: 492 AGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPDDKDDGRKMHPRS 551
Query: 551 SFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGV 610
SFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K+QG+
Sbjct: 552 SFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLKLQGM 610
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
DELS+VA EMVRLIETATAPI VDSSG INGWNAKVA++TGLP +EAMG+SL E+V
Sbjct: 611 DELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVADVTGLPVTEAMGRSLAKELVLH 670
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
ES VE L+ AL G+E++NVELKL+ F QK V ++VNAC SRD +NV GVCFV
Sbjct: 671 ESADMVERLLYLALQGDEEQNVELKLKTFGGQKDKEAVILVVNACASRDVSDNVVGVCFV 730
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
GQD+T +KV+MDKF R+QGDY+AI+Q+ NPLIPPIF +DE CSEWN AMEK++GW R
Sbjct: 731 GQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFGYCSEWNPAMEKLSGWRRE 790
Query: 791 EVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EV+GKML EIFG +CR+KGQD +TKFMI+L GQ TE FPF FF+RQG++VE
Sbjct: 791 EVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQDTEKFPFAFFDRQGKYVEA 850
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
LTA++R DAEG + G FCF+ I +LQ AL Q + +K+KELAYIRQE+KNPL
Sbjct: 851 LLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVALSKLKELAYIRQEIKNPL 910
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
GI F L+E++ +SE+Q+QY+ET CE+QI I+D MDL IE+G
Sbjct: 911 YGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESIEDG 958
>sp|Q39557|PHY2_CERPU Phytochrome 2 OS=Ceratodon purpureus GN=PHY2 PE=3 SV=1
Length = 1121
Score = 1183 bits (3061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/952 (60%), Positives = 715/952 (75%), Gaps = 18/952 (1%)
Query: 19 TTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEE 78
+ P K+ + +K + ADA L A +E S SG SF+YS+SV E VP
Sbjct: 2 SAPKKTYSSTTSAKSKHSVRVAQTTADAALEAVYEMSGDSGDSFDYSKSVGQSAESVPAG 61
Query: 79 QITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDF--ELNGL-I 135
+TAYL ++QRGGLIQ FGCM+AVEEP F +I YSEN E LDL ++ E++ L I
Sbjct: 62 AVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSMGEMDVLGI 121
Query: 136 GIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLE 195
G D RTLFTP SGA+L KAAA+++ISLLNPI VH R KP YAI HRID+GIVID E
Sbjct: 122 GTDIRTLFTPSSGAALEKAAATQDISLLNPITVHC--RRSGKPLYAIAHRIDIGIVIDFE 179
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
K D ++S AGA+QS KLA AI+RLQALPGGDIGLLCDTVVE+V++LTGYDRVM Y
Sbjct: 180 AVKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYK 239
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVV+EIRR DLEPYLG+H+PA DIPQA+RFLF +NRVR+I DC A PV +IQ
Sbjct: 240 FHEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASPVKLIQD 299
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------MKLWGL 366
++KQP+ L STLR+PHGCH QYM NMGSIASLVMAVIIN + KLWGL
Sbjct: 300 PDIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAIQRGRKLWGL 359
Query: 367 VVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA 426
VVCHHTSPR +PFPLR ACEFL+Q F +QL ME+++A QL EK+ILRTQ LLCDMLLRDA
Sbjct: 360 VVCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLCDMLLRDA 419
Query: 427 PFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTD 486
P IV+Q+P+IMDLVKCDGAALYYG R WL+G TPTE+Q+KDIA WLL H D TGLSTD
Sbjct: 420 PIGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKDSTGLSTD 479
Query: 487 SLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKM 546
SLA+A YPGA LLG AVCGMA A+IT+KDFLFWFRSHTAKEVKWGGAKH P KD+G KM
Sbjct: 480 SLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAEKDDGRKM 539
Query: 547 HPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSK 606
HPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R SFQ++ +++D+K + + N K
Sbjct: 540 HPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDI-DDSDTKTMIHARLNDLK 598
Query: 607 MQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
+ G+DELS VA EMVRLIETATAPI VDS+G INGWNAK+A +TGLP SEAMG+SL+ +
Sbjct: 599 LHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEAMGRSLVKD 658
Query: 667 VVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKG 726
+V +ES VE L+ A GEE++NVE+KL+ F Q + V ++VNAC+SRD ++V G
Sbjct: 659 LVLDESVVVVERLLYLASQGEEEQNVEIKLKTFGTQTEKEAVILIVNACSSRDVSDSVVG 718
Query: 727 VCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTG 786
VCFVGQD+T +K+ MDKF R+QGDY+ I+++ +PLIPPIF DE C EWN AME +TG
Sbjct: 719 VCFVGQDVTGQKMFMDKFTRIQGDYKTIVKNPHPLIPPIFGGDEYGYCFEWNPAMEALTG 778
Query: 787 WMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQ 843
W EV+GK+L EIFG CR+K QD +TKFMI L + G T+ F F F NR+G+
Sbjct: 779 WKHDEVVGKLLVGEIFGMEMMCCRLKSQDSMTKFMISLNNAMDGTNTDKFSFSFCNREGK 838
Query: 844 FVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEV 903
FVE L+ ++RT+A+G + G FCF+QI +LQ AL Q + AK+KELAYIRQE+
Sbjct: 839 FVEALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLKELAYIRQEI 898
Query: 904 KNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
KNPL GI F +LLE + +S++Q+Q+L+TS CE+Q+ +++ MDL IE+G
Sbjct: 899 KNPLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDG 950
>sp|P42499|PHYB_SOYBN Phytochrome B OS=Glycine max GN=PHYB PE=3 SV=1
Length = 1156
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/954 (60%), Positives = 710/954 (74%), Gaps = 45/954 (4%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I Y D G+ A FEQS SG+SFNYS S+ E VPE+QITAYL KIQRGG IQPFG
Sbjct: 42 IAQYTED-GVHAVFEQSGESGRSFNYSESIRIASESVPEQQITAYLVKIQRGGFIQPFGS 100
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS---------EDFELNG--------------LI 135
M+AV+EP+FRI+GYS+N +ML + +S F L +
Sbjct: 101 MIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGPQSVPSLDDKNDAAFAL 160
Query: 136 GIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLE 195
G D R LFT S L KA ++REISL+NPI +HS R+ KPFY ILHRIDVGIVIDLE
Sbjct: 161 GTDVRALFTHSSALLLEKAFSAREISLMNPIWIHS--RTSGKPFYGILHRIDVGIVIDLE 218
Query: 196 PSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYN 255
P+++ DPALS+AGAVQSQ+ V AIS+LQ+LP D+ LLCDTVVE V++LTGYDRVM+Y
Sbjct: 219 PARTEDPALSIAGAVQSQEALVRAISQLQSLPSADVKLLCDTVVESVRELTGYDRVMVYK 278
Query: 256 FHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQS 315
FH+D+HGEVVSE +R DLEPY+G+H+PA DIPQA+RFLFKQNRVRMI DCHA V V+Q
Sbjct: 279 FHEDEHGEVVSESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQD 338
Query: 316 KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD--------SMKLWGLV 367
+ L QPLCLV STL +PHGCH QYM NMGSIASLVMAVIIN D SM+LWGLV
Sbjct: 339 EALVQPLCLVGSTLGAPHGCHAQYMANMGSIASLVMAVIINGNDEEGVGGRSSMRLWGLV 398
Query: 368 VCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAP 427
VCHHTS R IPFPLRYACEFL+QAF LQL MELQ+A Q EK +LRTQ LLCDMLLRD+P
Sbjct: 399 VCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSP 458
Query: 428 FSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDS 487
IVTQSPSIMDLVKCDGAALY+ G + +GVTPTE+Q++DI WLL HGD TGLSTDS
Sbjct: 459 TGIVTQSPSIMDLVKCDGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDS 518
Query: 488 LAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMH 547
L +AGYPG LG G A IT KDFLFWFRSHTAKE+KWGGAK + G +MH
Sbjct: 519 LGDAGYPGLPRLGMQFVGWQVAYITEKDFLFWFRSHTAKEIKWGGAKLILRTRMMGQRMH 578
Query: 548 PRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKM 607
P SSFKAFLEVVK+RS PWE +E++AIHSLQ+++RDSF++ E N SK + + ++
Sbjct: 579 PLSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEHRN-SKAVVDPHVSEQEL 637
Query: 608 QGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEV 667
QGVDELSSVA EMVRLIETATAPIF VD G +NGWNAKV+ELTGLP EAMGKSL+ ++
Sbjct: 638 QGVDELSSVAREMVRLIETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDL 697
Query: 668 VHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGV 727
V +ES+ V L+ R EEDKNVE K+R F + Q+ +++VNAC+S+ + NNV GV
Sbjct: 698 VFKESEETVNKLLSR----EEDKNVETKMRTFGKEHQNKAAFLVVNACSSKHFTNNVVGV 753
Query: 728 CFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGW 787
CFVGQ++T +K++M KFI +QGDY+AI+ S NPLIPPIFASD+N CC EWN AMEK+
Sbjct: 754 CFVGQNVTGQKIVMHKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLDPS 813
Query: 788 MRH------EVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQ 841
+ +VIGKML E+FG+ C++KG D +TKFMI+L+ + GQ T+ FPF F +R
Sbjct: 814 NENVTVGGVDVIGKMLVGEVFGSCCQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRH 873
Query: 842 GQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQ 901
G++V+ LTA++R + EG++IG FCF+QI+ P+LQ AL+AQ ++ + ++KELAYI Q
Sbjct: 874 GKYVQTFLTANKRVNMEGQIIGAFCFLQIMSPELQQALKAQRQQEKEFLGRMKELAYICQ 933
Query: 902 EVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
VK PL+GIRF + LLE++S++ Q+Q+LETS ACE+Q++ II +DL IE+G
Sbjct: 934 GVKKPLSGIRFTNSLLEATSLTNEQKQFLETSVACEKQMLKIIRDVDLESIEDG 987
>sp|P36505|PHY1_PHYPA Phytochrome 1 OS=Physcomitrella patens subsp. patens GN=PHY1 PE=2
SV=1
Length = 1132
Score = 1140 bits (2948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/929 (60%), Positives = 697/929 (75%), Gaps = 19/929 (2%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVI-SPPEGVPEEQITAYLSKIQRGGLIQPFGCMLA 101
ADA L A FE+S SG SF+YS+SV S E +P +TAYL ++QRGGL Q FGCM+A
Sbjct: 27 TADAALQAVFEKSGDSGDSFDYSKSVSKSTAESLPSGAVTAYLQRMQRGGLTQSFGCMIA 86
Query: 102 VEEPTFRIIGYSENCLEMLDLRSRS--EDFELNGL-IGIDARTLFTPPSGASLAKAAASR 158
VE FR+I YSEN E+LDL ++ E++ L IG D RTLFT S ASL KAA ++
Sbjct: 87 VEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASLEKAAEAQ 146
Query: 159 EISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVS 218
E+SLLNPI V N R K YAI HRID+GIVID E K+ D +S AGA+QS KLA
Sbjct: 147 EMSLLNPITV--NCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSHKLAAK 204
Query: 219 AISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLG 278
AI+RLQALPGG+IGLLCDTVVE+V++LTGYDRVM Y FH+D+HGEVV+EIRR+DLEPYLG
Sbjct: 205 AITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADLEPYLG 264
Query: 279 IHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQ 338
+H+P DIPQA+RFLF +N+VR+I DC A PV VIQ L+QP+ L STLRSPHGCH Q
Sbjct: 265 LHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPHGCHAQ 324
Query: 339 YMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIPFPLRYACEFLV 389
YM NMGSIASLVMAVIIN + KLWGLVVCHHTSPR +PFPLR AC FL+
Sbjct: 325 YMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACGFLM 384
Query: 390 QAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALY 449
Q F LQL ME++ A QL EK+ILRTQ LLCDMLLRDAP IV+Q P+IMDLVKCDGAALY
Sbjct: 385 QVFGLQLNMEVESAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCDGAALY 444
Query: 450 YGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATA 509
YG WL+G TPTESQ+KDIA WLL H D TGLSTDSLA+A YP A LLG AVCGMA A
Sbjct: 445 YGKPFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMAAA 504
Query: 510 RITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVS 569
+IT+KDFLFWFRSHTAKE+KWGGAKH P +G KMHPRSSFKAFLEVVK RS PWE
Sbjct: 505 KITAKDFLFWFRSHTAKEIKWGGAKHDPGENHDGRKMHPRSSFKAFLEVVKRRSLPWEDV 564
Query: 570 EINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETATA 629
E++AIHSLQ+++R SFQ++ ++D+K + + N K+ +DELS VA EMVRLIETATA
Sbjct: 565 EMDAIHSLQLILRGSFQDI-ADSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIETATA 623
Query: 630 PIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGEED 689
PI VDS+G INGWNAK+A++TGLP SEA G+SL+ ++V +ES VE L+ AL GEE+
Sbjct: 624 PILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAVVERLLYLALRGEEE 683
Query: 690 KNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQG 749
+NVE+KL+ F Q + VV ++V+AC+S NV GVCFVGQD+T +K+ MDKF R+QG
Sbjct: 684 QNVEIKLKTFGTQTEKGVVILIVDACSSIHVSENVVGVCFVGQDVTGQKMFMDKFTRIQG 743
Query: 750 DYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFG---NFC 806
DY+ I+Q+ +PLIPPIF +DE C EWN AME +TGW + EV+GK+L EIFG C
Sbjct: 744 DYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGKLLVGEIFGMQMMCC 803
Query: 807 RMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFC 866
RMK QD +TKFMI L + GQ T+ F F FF+R+G++V+V L+ ++RT+A+G + G FC
Sbjct: 804 RMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTNKRTNADGVITGVFC 863
Query: 867 FMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQ 926
F+QI +LQ AL+ Q + AK+KELAYI +E+KNPL G+ F +LLE + +S++Q
Sbjct: 864 FLQIASSELQQALKVQRATEKVAVAKLKELAYIVREIKNPLCGLTFTRQLLEDTDLSDDQ 923
Query: 927 RQYLETSDACERQIMTIIDGMDLRCIEEG 955
+Q+L+TS CE+Q+ ++ MDL IE+G
Sbjct: 924 QQFLDTSAVCEQQLQKSLNDMDLESIEDG 952
>sp|P42496|PHY_ADICA Phytochrome 1 OS=Adiantum capillus-veneris GN=PHY1 PE=2 SV=2
Length = 1118
Score = 1134 bits (2934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/933 (58%), Positives = 705/933 (75%), Gaps = 27/933 (2%)
Query: 39 IDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGC 98
I +ADA L A +E+S SG SF+YS+SV + EG+ + +TAYL ++QRGGL+Q FGC
Sbjct: 22 IAQTSADAKLYAAYEESSESG-SFDYSQSVSAGKEGISSQLVTAYLQRMQRGGLVQQFGC 80
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRSEDF--ELNGL-IGIDARTLFTPPSGASLAKAA 155
++AVEE TFR++ Y N EMLD+ +++ + + L IG D RTL +P S ++L +
Sbjct: 81 LIAVEEETFRVLAYGANAPEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASASALDRVI 140
Query: 156 ASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKL 215
++S+ NPI V S RS KPFYAILHR DVG+VIDLEP + D +++ GA+QS KL
Sbjct: 141 GVVDVSMFNPITVQS--RSSGKPFYAILHRNDVGLVIDLEPIRPDDASIT-GGALQSHKL 197
Query: 216 AVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEP 275
A AI+RLQ+LPGGDIGLLCD+VVE+V +LTG+DRVM Y FH+D+HGEVV+EIRR+DLEP
Sbjct: 198 AAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRRTDLEP 257
Query: 276 YLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGC 335
Y+G+H+PA DIPQAARFLF +NRVRMICDC PV +IQ K L QP+ L S LR+PHGC
Sbjct: 258 YIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSKLRAPHGC 317
Query: 336 HLQYMTNMGSIASLVMAVIINSKDS---------MKLWGLVVCHHTSPRYIPFPLRYACE 386
H QYM NM SI+SLVMAVI+N D +KLWGLVVCHHTSPRY+PFP+R ACE
Sbjct: 318 HTQYMANMNSISSLVMAVIVNDSDDDSPGHSSQGIKLWGLVVCHHTSPRYVPFPVRSACE 377
Query: 387 FLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGA 446
FL+Q FSLQL ME+ +A Q+ EK+ILRTQ LLCDMLLRDAP IV+QSP+IMDLV CDGA
Sbjct: 378 FLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVTCDGA 437
Query: 447 ALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGM 506
ALYYG +CWL+G TPTE+Q+ DIA WLL+ H D TGLSTDSLA+ GYP A+ LG AVCG+
Sbjct: 438 ALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLGDAVCGL 497
Query: 507 ATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPW 566
A A+IT+ DFLFWFRSHTAKEV+WGGA+H PE +D+G +MHPRSSFKAFLEVVK +S PW
Sbjct: 498 AAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVKQQSLPW 557
Query: 567 EVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIET 626
E E++AIHSLQ+++R SFQ++++ N +K + + N K+QG+DELS+VA EMVRLIET
Sbjct: 558 EDVEMDAIHSLQLILRGSFQDIDDSN-TKTMIHARLNDLKLQGLDELSTVASEMVRLIET 616
Query: 627 ATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLG 686
ATAPI VD G INGWN KVAELTGL AMGKSL E+VHEES+ VE ++ AL G
Sbjct: 617 ATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERVLHLALEG 676
Query: 687 EEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIR 746
EE++++E+ LR ++ KQ VV ++VN C SRD NNV GVCFVGQD+T +K+++D+FIR
Sbjct: 677 EEEQDIEIHLRTYDQHKQKGVVILIVNTCCSRDVSNNVVGVCFVGQDVTGQKLVLDRFIR 736
Query: 747 LQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFG--- 803
+QGDY+AI+QS+NPLIPPIF +DE CSEWNAAMEK++ W R EV+GKML EIFG
Sbjct: 737 IQGDYKAIVQSLNPLIPPIFGADEYGFCSEWNAAMEKLSNWRREEVLGKMLVGEIFGLQM 796
Query: 804 NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
CR++GQD++TK MI+L + GQ +E FP F++R G+ VE L AS+RTDA+G++ G
Sbjct: 797 VCCRLQGQDVVTKLMIVLNDAVNGQESEKFPLVFYDRNGRRVEALLIASKRTDADGRITG 856
Query: 864 CFCFMQILVPD-LQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSI 922
FCF+ P+ LQ + + E +D KEL+Y+++E+K PL G+ F +LE +++
Sbjct: 857 VFCFLHTASPELLQALIIKRAKEKVD-----KELSYVKEELKKPLEGLAFTRTVLEGTNL 911
Query: 923 SENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+ QRQ ++T+ CERQ+ I++ DL IEEG
Sbjct: 912 TIEQRQLIKTNAWCERQLRKILED-DLNNIEEG 943
>sp|Q40762|PHY_PICAB Phytochrome OS=Picea abies PE=2 SV=1
Length = 1136
Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/950 (58%), Positives = 696/950 (73%), Gaps = 39/950 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEG--VPEEQITAYLSKIQRGGLIQP 95
+I DA L AEFE SV SF+Y++S+ + VP E + AYL ++Q+ LIQP
Sbjct: 28 VITQTPVDAKLQAEFEGSV---HSFDYTKSIDISGDSSSVPSETVKAYLQRLQKEMLIQP 84
Query: 96 FGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGL--------------IGIDART 141
FGC+LAVEE + ++GYSEN EMLD+ + G IG+DART
Sbjct: 85 FGCVLAVEEGSCAVVGYSENAPEMLDVVGGAHAVPSIGGQQQEGGGGGGGLLRIGMDART 144
Query: 142 LFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGD 201
LF P S A+L KAA ++ L+NPI V N KPFYAIL+RID G+VID EP D
Sbjct: 145 LFKPASAAALQKAATFADMHLVNPIFVRCNRSG--KPFYAILNRIDAGLVIDFEPVMPSD 202
Query: 202 PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDH 261
+S AGA+QS KLA AISRLQ+LPGGDI LLCDTVV++V++LTGYDRVM Y FH+D+H
Sbjct: 203 VPVSAAGALQSYKLAAKAISRLQSLPGGDIRLLCDTVVQEVRELTGYDRVMAYRFHEDEH 262
Query: 262 GEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQP 321
GEVV+E+RR DLEPYLG+H+PA DIPQA+RFLF +NRVRMICDC A PV VIQ K L+QP
Sbjct: 263 GEVVAEMRRPDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCCAPPVNVIQDKRLRQP 322
Query: 322 LCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINS-------------KDSMKLWGLVV 368
L L STLR+PHGCH QYM NMGSIASLVM+V N ++ KLWGLVV
Sbjct: 323 LSLCGSTLRAPHGCHAQYMANMGSIASLVMSVTTNENGDDSEGGGQQQPQNRRKLWGLVV 382
Query: 369 CHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPF 428
CHHTSPR IPFPLRYACEFL+Q F +QL E+++A QL EK+ILR Q +LCDMLLRDAP
Sbjct: 383 CHHTSPRVIPFPLRYACEFLMQVFGIQLNKEVELAAQLREKHILRVQPVLCDMLLRDAPV 442
Query: 429 SIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSL 488
IV+Q+P+IMDLVKCDGAAL YG R WL+G TPTE+Q+ DIA WLL +H D TGLSTDSL
Sbjct: 443 GIVSQTPNIMDLVKCDGAALLYGKRLWLLGTTPTEAQILDIADWLLEHHRDSTGLSTDSL 502
Query: 489 AEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHP 548
AEAGYPGAA LG AVCG+A ARITSKDFLFWFRSHTAKE+ WGGAKH P KD+G +MHP
Sbjct: 503 AEAGYPGAASLGDAVCGIAAARITSKDFLFWFRSHTAKEIIWGGAKHDPNDKDDGRRMHP 562
Query: 549 RSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQ 608
RSSFKAFLEVVK RS PWE E++AIHSLQ+++RDSF ++ +++DSK + + N ++Q
Sbjct: 563 RSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRDSFHDI-DDSDSKTMIHARLNDLRLQ 621
Query: 609 GVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVV 668
G+DELS+V EMVRLIETAT PI +DS+G +NGWN K AELTGL A E +G+ LID V
Sbjct: 622 GIDELSAVTNEMVRLIETATVPILAIDSNGLVNGWNTKAAELTGLLADEVIGRPLIDLVQ 681
Query: 669 HEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVC 728
H+ + V+ ++ AL GEE++NVE+KL+ F +Q++ V ++VNAC+SRD + NV GVC
Sbjct: 682 HDSVE-IVKKMLYLALQGEEEQNVEIKLKTFGIQEEKGPVVLIVNACSSRDLEENVVGVC 740
Query: 729 FVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWM 788
FV QD+T +++ MDKF LQGDY AI+Q+ NPLIPPIF +DE CSEWN AMEK+TGW
Sbjct: 741 FVAQDVTWQRIAMDKFTHLQGDYRAIVQNPNPLIPPIFGADEYGYCSEWNPAMEKLTGWK 800
Query: 789 RHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFV 845
R EVIGKML E+FG C++KGQD LTK I+L + G+ TE FPF FF+R G+
Sbjct: 801 REEVIGKMLVGEVFGIHRMSCQLKGQDGLTKLRIVLNNAMAGKETEKFPFSFFDRHGKNT 860
Query: 846 EVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKN 905
E L+A++RTDAEG + G FCF+ + +LQ AL+ Q + + ++KELAYIRQE++N
Sbjct: 861 EALLSANKRTDAEGIITGVFCFLHVTSTELQQALQVQRMAEQAAMDRLKELAYIRQEIRN 920
Query: 906 PLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
PL GI F KL+ES+ +SE Q+Q ++TS C+RQ++ ++D DL IE+G
Sbjct: 921 PLYGIIFTRKLMESTDLSEEQKQIVQTSALCQRQLVKVLDDADLESIEDG 970
>sp|P33529|PHY_MOUSC Phytochrome OS=Mougeotia scalaris GN=PHY PE=2 SV=2
Length = 1124
Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/934 (56%), Positives = 676/934 (72%), Gaps = 21/934 (2%)
Query: 39 IDHYNADAGLLAEFE-QSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
+ +ADA L FE S + G SF+Y++SV ++P E + + +TAYL ++QRG +IQ
Sbjct: 23 VTQASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRGSIIQ 82
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS---EDFELNGLIGIDARTLFTPPSGASL 151
FGCM+AVE TFRII YSEN EML + +S D + IG D R+L +P S + +
Sbjct: 83 SFGCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPTGDHQNAIGIGTDVRSLLSPSSVSVV 142
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEP-SKSGDPALSLAGAV 210
KA A+ ++S++NPI V+S + +K F+AILH DVG+VIDLEP S S D A+ AGAV
Sbjct: 143 EKAVAANDVSMMNPIAVYS--LATQKLFFAILHMNDVGLVIDLEPISSSSDSAMFSAGAV 200
Query: 211 QSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRR 270
QS KLA AISRLQ+LPGGDI LCD VVE+V++LTGYDRVM Y FHDD+HGEVV+EIRR
Sbjct: 201 QSHKLAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRR 260
Query: 271 SDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLR 330
SDLEPYLG+H+PA DIPQA+RFLF +NR+RMICDC + V V+Q + Q + L ST+R
Sbjct: 261 SDLEPYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGSTMR 320
Query: 331 SPHGCHLQYMTNMGSIASLVMAVIINSKDSM---------KLWGLVVCHHTSPRYIPFPL 381
HGCH QYM NMGS ASLVM+V IN + + KLWGL+VCHH++PR+IPFP+
Sbjct: 321 GVHGCHTQYMMNMGSTASLVMSVTINDTNEIAGGPGMKGRKLWGLIVCHHSTPRHIPFPI 380
Query: 382 RYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLV 441
R ACEFL+Q F LQL ME+++A Q EK+ILRTQ LLCDMLLRDAP IV+QSP++MDLV
Sbjct: 381 RSACEFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMDLV 440
Query: 442 KCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQ 501
KCDGAAL +GGRCWL+G++PT+ Q+KDIA WL+++H D TGLSTDSL +AGYP A LG
Sbjct: 441 KCDGAALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKARELGV 500
Query: 502 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKN 561
VCGMA ARIT DFLFWFR H KEVKW GAK +D G +MHPRSSFKAFLEVVK
Sbjct: 501 DVCGMAAARITENDFLFWFRGHAQKEVKWAGAKDGGSEED-GSRMHPRSSFKAFLEVVKQ 559
Query: 562 RSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMV 621
RS PWE E++AIHSLQ+++R SFQ++E++ D K+ + + +QG++ELSSVA EMV
Sbjct: 560 RSLPWEDVEMDAIHSLQLILRGSFQDIEDKEDRKIV-HARLKEMHLQGMEELSSVASEMV 618
Query: 622 RLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLIC 681
RLIETATAPI VD++G +NGWN K++ELTGL E MGKSL+ ++ H S+ VE L+
Sbjct: 619 RLIETATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLLY 678
Query: 682 RALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLM 741
AL GEE++NVE++L+ + +Q+ V ++VNAC SRD V GVCFV QD+T EK++
Sbjct: 679 MALNGEEEQNVEIRLKTWGMQQGKGPVILMVNACASRDVSEKVVGVCFVAQDVTGEKIVQ 738
Query: 742 DKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREI 801
DKF R+QGDY I++S N LIPPIF SDE+ C EWN AME+++G R E IGKML RE+
Sbjct: 739 DKFTRIQGDYTTIVRSHNSLIPPIFGSDESGFCVEWNPAMERLSGVKREEAIGKMLTREL 798
Query: 802 FGNFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTASRRTDAEGKV 861
FG R+K D LTKFMI+L ++ T+ FPF F++R G+ VEV LT S+R ++EG V
Sbjct: 799 FGGILRLKNVDGLTKFMIVLNAAMSSHDTDKFPFTFYDRSGKIVEVLLTTSKRCNSEGVV 858
Query: 862 IGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSS 921
G FCF+ +LQ AL Q + K KELAYIRQE++NPL+GI F +E +
Sbjct: 859 TGVFCFLHTASSELQQALTVQKAAERVAEVKAKELAYIRQEIQNPLDGIHFARSFMEHTV 918
Query: 922 ISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+SE+Q+Q +ETS CE+Q+ I+ MDL IE+G
Sbjct: 919 LSEDQKQLIETSATCEKQLRRILADMDLASIEKG 952
>sp|Q10CQ8|PHYC_ORYSJ Phytochrome C OS=Oryza sativa subsp. japonica GN=PHYC PE=2 SV=1
Length = 1137
Score = 1022 bits (2642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/956 (52%), Positives = 661/956 (69%), Gaps = 33/956 (3%)
Query: 23 KSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEGVPEEQIT 81
+SS A+ K ++ DA L AEFE S + F+YS SV + G ++
Sbjct: 14 RSSSARSK---HSARVVAQTPMDAQLHAEFE---GSQRHFDYSSSVGAANRSGATTSNVS 67
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGID 138
AYL +QRG +QPFGC+LAV TF ++ YSEN EMLDL + D +G D
Sbjct: 68 AYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREALAVGTD 127
Query: 139 ARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSK 198
RTLF S +L KAA +++LLNPILVH+ R+ KPFYAI+HRIDVG+VIDLEP
Sbjct: 128 VRTLFRSHSFVALQKAATFGDVNLLNPILVHA--RTSGKPFYAIMHRIDVGLVIDLEPVN 185
Query: 199 SGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHD 258
D ++ GA++S KLA AI+RLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+
Sbjct: 186 PVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHE 245
Query: 259 DDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKEL 318
D+HGEV++E +RSDLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L
Sbjct: 246 DEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQDDSL 305
Query: 319 KQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWG 365
QP+ + STLR+PHGCH QYM +MGS+ASLVM+V IN + KLWG
Sbjct: 306 TQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGRKLWG 365
Query: 366 LVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRD 425
L+VCHHTSPR++PFPLRYACEFL+Q F +Q+ E+++A Q E++ILRTQ LLCDMLLRD
Sbjct: 366 LMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDMLLRD 425
Query: 426 APFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLST 485
AP I TQSP++MDLVKCDGAALYY + W++G TP+E+++K+I WL H TGLST
Sbjct: 426 APVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGSTGLST 485
Query: 486 DSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGG 544
DSL EAGYPGAA LG VCGMA +I+SKDF+FWFRSHTAKE+KWGGAKH P + DNG
Sbjct: 486 DSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDADDNGR 545
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME---EENDSKVQGNTQ 601
KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S Q+ + N +
Sbjct: 546 KMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIVTAPS 605
Query: 602 QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGK 661
+ K+QG+ EL +V EMVRLIETATAPI VD +G+INGWN K AELTGLP EA+GK
Sbjct: 606 DDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVMEAIGK 665
Query: 662 SLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYK 721
L+D V+ ++S V+ ++ AL G E++N+++KL+ F Q+ + V ++VNAC SRD
Sbjct: 666 PLVDLVI-DDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSRDLS 724
Query: 722 NNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAM 781
V GVCFV QD+T + ++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM
Sbjct: 725 EKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNEAM 784
Query: 782 EKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFF 838
+K+TG R + + K+L E+F + CR+K LTK IL+ I+GQ E FGFF
Sbjct: 785 QKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLFGFF 844
Query: 839 NRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAY 898
N G+++E +TA++RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL Y
Sbjct: 845 NTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKELTY 904
Query: 899 IRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
IRQE++NPLNG++F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 905 IRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIEQ 960
>sp|A2XM23|PHYC_ORYSI Phytochrome C OS=Oryza sativa subsp. indica GN=PHYC PE=2 SV=2
Length = 1137
Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/956 (52%), Positives = 660/956 (69%), Gaps = 33/956 (3%)
Query: 23 KSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPPEGVPEEQIT 81
+SS A+ K ++ DA L AEFE S + F+YS SV + G ++
Sbjct: 14 RSSSARSK---HSARVVAQTPMDAQLHAEFE---GSQRHFDYSSSVGAANRSGATTSNVS 67
Query: 82 AYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGID 138
AYL +QRG +QPFGC+LAV TF ++ YSEN EMLDL + D +G D
Sbjct: 68 AYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREALAVGTD 127
Query: 139 ARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSK 198
RTLF S +L KAA +++LLNPILVH+ R+ KPFYAI+HRIDVG+VIDLEP
Sbjct: 128 VRTLFRSHSFVALQKAATFGDVNLLNPILVHA--RTSGKPFYAIMHRIDVGLVIDLEPVN 185
Query: 199 SGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHD 258
D ++ GA++S KLA AI+RLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+
Sbjct: 186 PVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHE 245
Query: 259 DDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKEL 318
D+HGEV++E +RSDLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A PV +IQ L
Sbjct: 246 DEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQDDSL 305
Query: 319 KQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSM-------------KLWG 365
QP+ + STLR+PHGCH QYM +MGS+ASLVM+V IN + KLWG
Sbjct: 306 TQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGRKLWG 365
Query: 366 LVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRD 425
L+VCHHTSPR++PFPLRYACEFL+Q F +Q+ E+++A Q E++ILRTQ LLCDMLLRD
Sbjct: 366 LMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDMLLRD 425
Query: 426 APFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLST 485
AP I TQSP++MDLVKCDGAALYY + W++G TP+E+++K+I WL H TGLST
Sbjct: 426 APVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGSTGLST 485
Query: 486 DSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGG 544
DSL EAGYPGAA LG V GMA +I+SKDF+FWFRSHTAKE+KWGGAKH P + DNG
Sbjct: 486 DSLVEAGYPGAAALGDVVYGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDADDNGR 545
Query: 545 KMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEME---EENDSKVQGNTQ 601
KMHPRSSFKAFLEVVK RS PWE E++AIHSLQ+++R S Q+ + N +
Sbjct: 546 KMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIVTAPS 605
Query: 602 QNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGK 661
+ K+QG+ EL +V EMVRLIETATAPI VD +G+INGWN K AELTGLP EA+GK
Sbjct: 606 DDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVMEAIGK 665
Query: 662 SLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYK 721
L+D V+ ++S V+ ++ AL G E++N+++KL+ F Q+ + V ++VNAC SRD
Sbjct: 666 PLVDLVI-DDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACCSRDLS 724
Query: 722 NNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAM 781
V GVCFV QD+T + ++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM
Sbjct: 725 EKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNEAM 784
Query: 782 EKVTGWMRHEVIGKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFF 838
+K+TG R + + K+L E+F + CR+K LTK IL+ I+GQ E FGFF
Sbjct: 785 QKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKLLFGFF 844
Query: 839 NRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAY 898
N G+++E +TA++RTDAEGK+ G CF+ + P+LQ AL+ Q + + KEL Y
Sbjct: 845 NTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFKELTY 904
Query: 899 IRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
IRQE++NPLNG++F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 905 IRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIEQ 960
>sp|P93673|PHYA_LATSA Phytochrome type A OS=Lathyrus sativus GN=PHYA PE=3 SV=1
Length = 1124
Score = 1016 bits (2627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/964 (52%), Positives = 666/964 (69%), Gaps = 34/964 (3%)
Query: 18 NTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSR------SVISP 71
T P +SS+ + N + II DA L A FE+S G SF+YS SV
Sbjct: 3 TTRPSQSSNNSGRSRNSAR-IIAQTTVDAKLHATFEES---GSSFDYSSWVRVSGSVDGD 58
Query: 72 PEGVPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----E 127
+ + TAYL+ IQRG IQPFGC+LA++E T +++ YSEN EML + S +
Sbjct: 59 QQPRSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVG 118
Query: 128 DFELNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRID 187
D G IG D RT+FT PS ++L KA E+SLLNPILVH + KPFYAI+HR+
Sbjct: 119 DHPALG-IGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSG--KPFYAIIHRVT 175
Query: 188 VGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTG 247
++ID EP K + ++ AGA+QS KLA AI+RLQ+L G + LCDT+V++V +LTG
Sbjct: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTG 235
Query: 248 YDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHA 307
YDRVM Y FH+DDHGEV++EI + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 236 YDRVMAYKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNA 295
Query: 308 IPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD-------- 359
V V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N D
Sbjct: 296 KHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADA 355
Query: 360 -----SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRT 414
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRT
Sbjct: 356 VLPQKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRT 415
Query: 415 QVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLL 474
Q LLCDML+RDAP IV+QSP+IMDLVKCDGAAL+Y + WL+G TPTE Q+++IA W+
Sbjct: 416 QTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTEYQIREIALWMS 475
Query: 475 NNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAK 534
H D TGLSTDSL +AG+PGA L VCGMA RITSKD +FWFRSHTA E++WGGAK
Sbjct: 476 EYHTDSTGLSTDSLLDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAK 535
Query: 535 HHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDS 594
H P +D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++ ++ + + +
Sbjct: 536 HEPGEQDDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLN 595
Query: 595 KVQGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLP 654
NT+ N K++G+ EL +V EMVRLIETAT PI VD GT+NGWN K+AELTGLP
Sbjct: 596 TKAINTRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLP 655
Query: 655 ASEAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNA 714
EA+GK L+ +V + S V+ ++ AL GEE+KNV+ +++ Q + + ++VNA
Sbjct: 656 VGEAIGKHLL-TLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVEFGPISLIVNA 714
Query: 715 CTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACC 774
C SRD + NV GVCFV QDIT +K +MDKF R++GDY+AI+Q+ N LIPPIF +DE C
Sbjct: 715 CASRDLRENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWC 774
Query: 775 SEWNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTE 831
EWNAAM K+TGW R EV+ KML E+FG + CR+K Q+ F I+L + +TG TE
Sbjct: 775 CEWNAAMIKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETE 834
Query: 832 NFPFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYA 891
FGFF+R+G++VE L+ S++ DAEG V G FCF+Q+ P+LQ AL Q L +
Sbjct: 835 KVAFGFFSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALK 894
Query: 892 KIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRC 951
++K L Y++++++NPL GI F K+LE + + Q+Q + TS C+RQ+ I+D DL
Sbjct: 895 RLKVLTYMKRQIRNPLAGIVFSSKMLEGTDLETEQKQIVNTSSQCQRQLSKILDDSDLDG 954
Query: 952 IEEG 955
I +G
Sbjct: 955 IIDG 958
>sp|P30733|PHYA_SOLTU Phytochrome A OS=Solanum tuberosum GN=PHYA PE=2 SV=2
Length = 1123
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/944 (53%), Positives = 657/944 (69%), Gaps = 33/944 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQ--ITAYLSKIQRGG 91
II + DA L A+FE+S G SF+YS SV ++ E P+ TAYL +IQ+G
Sbjct: 22 IIAQTSIDAKLHADFEES---GDSFDYSSSVRVTNVAEGEQRPKSDKVTTAYLHQIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
IQPFGC+LA++E T ++I +SEN EML + S + + + G IGID RT+FT PS
Sbjct: 79 FIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLG-IGIDIRTIFTGPS 137
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
GA+L KA E+SLLNP+LVH + KPFYAI+HR+ ++ID EP K + ++ A
Sbjct: 138 GAALQKALGFGEVSLLNPVLVHCKNSG--KPFYAIVHRVTGSLIIDFEPVKPYEVPMTAA 195
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEVVSE
Sbjct: 196 GALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSE 255
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A V V+Q ++L L L S
Sbjct: 256 ITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGS 315
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSP 374
TLR+PH CHLQYM NM SIASLVMAV++N D +LWGLVV H+T+P
Sbjct: 316 TLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVSHNTTP 375
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQS 434
R+ PFPLRYACEFL Q F++ + EL++ Q EKNILRTQ LLCDML+RDAP IV+QS
Sbjct: 376 RFAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQS 435
Query: 435 PSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYP 494
P+IMDL+KCDGAAL Y + +G+ P++ QL DI WL H D TGLSTDSL +AG+P
Sbjct: 436 PNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFP 495
Query: 495 GAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKA 554
GA LG AVCGMA RI+ KD+LFW+RSHTA EV+WGGAKH P KD+G KMHPRSSFK
Sbjct: 496 GALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKG 555
Query: 555 FLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELS 614
FLEVVK RS PW+ E++ IHSLQ+++R++F++ + N + + +T+ N K+ G+ EL
Sbjct: 556 FLEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTKLNDLKIDGMQELE 615
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETA+ PIF VD G +NGWN KVAELTGLP EA+GK L+ +V + S
Sbjct: 616 AVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLL-TLVEDSSVD 674
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V ++ AL G+E++NVE +++ + S + ++VNAC S+D +++V GVCF+ QDI
Sbjct: 675 TVNKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDI 734
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K +MDKF R++GDY AIIQ+ +PLIPPIF +D+ CSEWN+AM +TGW R +V+
Sbjct: 735 TGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTMLTGWRRDDVMD 794
Query: 795 KMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
KML E+FG CR+K Q+ F ++L ITGQ +E PFGFF R G++VE L
Sbjct: 795 KMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFARYGKYVECLLCV 854
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
S+R D EG V G FCF+Q+ +LQ AL Q L + ++K LAYIR++++NPL+GI
Sbjct: 855 SKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIRNPLSGII 914
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F K+LE +S+ E Q+ L TS C+RQ+ I+D DL I EG
Sbjct: 915 FSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEG 958
>sp|P15001|PHYA_PEA Phytochrome A OS=Pisum sativum GN=PHYA PE=3 SV=1
Length = 1124
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/961 (51%), Positives = 665/961 (69%), Gaps = 28/961 (2%)
Query: 18 NTTPFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVI---SPPEG 74
T P +SS+ + N + II DA L A FE+S +S + R +
Sbjct: 3 TTRPSQSSNNSGRSRNSAR-IIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGDQQP 61
Query: 75 VPEEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
+ TAYL+ IQRG IQPFGC+LA++E T +++ YSEN EML + S + D
Sbjct: 62 RSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
G IG D RT+FT PS ++L KA E+SLLNPILVH + KPFYAI+HR+ +
Sbjct: 122 ALG-IGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSG--KPFYAIIHRVTGSL 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
+ID EP K + ++ AGA+QS KLA AI+RLQ+L G + LCDT+V++V +LTGYDR
Sbjct: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEV++EI + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A V
Sbjct: 239 VMAYKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHV 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKD----------- 359
V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N D
Sbjct: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLP 358
Query: 360 --SMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVL 417
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ L
Sbjct: 359 QKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTL 418
Query: 418 LCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNH 477
LCDML+RDAP IV+QSP+IMDLVKCDGAAL+Y + WL+G TPTESQL++IA W+ H
Sbjct: 419 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTESQLREIALWMSEYH 478
Query: 478 GDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP 537
D TGLSTDSL++AG+PGA L VCGMA RITSKD +FWFRSHTA E++WGGAKH P
Sbjct: 479 TDSTGLSTDSLSDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEP 538
Query: 538 EHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQ 597
+D+G KMHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++ ++ + + +
Sbjct: 539 GDQDDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKA 598
Query: 598 GNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASE 657
NT+ N K++G+ EL +V EMVRLIETAT PI VD GT+NGWN K+AELTGLP E
Sbjct: 599 INTRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGE 658
Query: 658 AMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTS 717
A+GK L+ +V + S V+ ++ AL GEE+KNV+ +++ Q + + ++VNAC S
Sbjct: 659 AIGKHLL-TLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVESGPISLIVNACAS 717
Query: 718 RDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEW 777
+D + NV GVCFV QDIT +K +MDKF R++GDY+AI+Q+ N LIPPIF +DE C EW
Sbjct: 718 KDLRENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEW 777
Query: 778 NAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFP 834
NAAM K+TGW R EV+ KML E+FG + CR+K Q+ F I+L + +TG TE P
Sbjct: 778 NAAMIKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVP 837
Query: 835 FGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIK 894
FGFF+R+G++VE L+ S++ DAEG V G FCF+Q+ P+LQ AL Q L + ++K
Sbjct: 838 FGFFSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLK 897
Query: 895 ELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
L Y++++++NPL GI F K+LE + + Q++ + TS C+RQ+ I+D DL I +
Sbjct: 898 VLTYMKRQIRNPLAGIVFSSKMLEGTDLETEQKRIVNTSSQCQRQLSKILDDSDLDGIID 957
Query: 955 G 955
G
Sbjct: 958 G 958
>sp|P33530|PHYA1_TOBAC Phytochrome A1 OS=Nicotiana tabacum GN=PHYA1 PE=3 SV=1
Length = 1124
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/943 (52%), Positives = 652/943 (69%), Gaps = 31/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV----ISPPEGVPEEQ--ITAYLSKIQRGG 91
II DA L A+FE+S G SF+YS SV ++ E P+ TAYL++IQ+G
Sbjct: 22 IIAQTTIDAKLHADFEES---GDSFDYSSSVRVTSVAGDERKPKSDRVTTAYLNQIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDF--ELNGL-IGIDARTLFTPPSG 148
IQPFGC+LA++E TF++I +SEN EML + S + EL L IG D RT+FT PS
Sbjct: 79 FIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALGIGTDIRTIFTGPSA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
A+L KA E+SLLNP+LVH + KP+YAI+HR+ ++ID EP K + ++ AG
Sbjct: 139 AALQKALGFGEVSLLNPVLVHCKTSG--KPYYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AI+RLQALP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEVV+EI
Sbjct: 197 ALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVVAEI 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ L+PYLG+H+PA DIPQAARFLF +N+VRMICDC A V V+Q ++L L L ST
Sbjct: 257 TKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPR 375
LR+PH CHLQYM NM SIASLVMAV++N D +LWGLVVCH+T+PR
Sbjct: 317 LRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRLWGLVVCHNTTPR 376
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+R AP IV+QSP
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRVAPLGIVSQSP 436
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVKCDGAAL Y + +G+TP++ QL DI WL H D TGLSTDSL +AG+PG
Sbjct: 437 NIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDSTGLSTDSLYDAGFPG 496
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RI+ K +LFW+RSHTA EV+WGGAKH P KD+G KMHPRSSFKAF
Sbjct: 497 ALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 556
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++ ++ + + + +T+ N K+ G+ EL +
Sbjct: 557 LEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTKLNDLKIDGLQELEA 616
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETA+ PIF VD G +NGWN K+AELTGLP EA+G L+ +V + S
Sbjct: 617 VTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHLL-TLVEDSSVDT 675
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V ++ AL G+E++NVE +++ S + ++VNAC SRD ++V GVCF+ QDIT
Sbjct: 676 VSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGDSVVGVCFIAQDIT 735
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K +MDKF R++GDY AIIQ+ +PLIPPIF +D+ CSEWN+AM K+TGW R +VI K
Sbjct: 736 GQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVIDK 795
Query: 796 MLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG CR+K Q+ F ++L +TGQ FGFF R G++VE L S
Sbjct: 796 MLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFARNGKYVECLLCVS 855
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+R D EG V G FCF+Q+ +LQ AL Q L + ++K LAYIR++++NPL+GI F
Sbjct: 856 KRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYIRRQIRNPLSGIIF 915
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
K+LE +++ E Q+ L TS C+RQ+ I+D DL I +G
Sbjct: 916 SRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDG 958
>sp|O49934|PHYA_POPTM Phytochrome A OS=Populus tremuloides GN=PHYA PE=2 SV=1
Length = 1125
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/943 (51%), Positives = 651/943 (69%), Gaps = 31/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVIS-----PPEGVPEEQITAYLSKIQRGGL 92
II DA L A+FE+S +S + R S PP ++ TAYL IQ+G L
Sbjct: 22 IIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRS--DKVTTAYLHHIQKGKL 79
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGC+LA++E TFR++ YSEN E+L + S + + + G IG D RT+FT PS
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLG-IGTDIRTIFTAPSA 138
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
++L KA ++SLLNPILVH + KPFYAI+HR+ ++ID EP K + ++ AG
Sbjct: 139 SALQKAMGFGDVSLLNPILVHCKTSG--KPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR M Y FHDDDHGEVVSE+
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEV 256
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ +EPYLG+H+PA DIPQA+RFLF +N+VRMI DCHA V V+Q ++L L L ST
Sbjct: 257 TKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGST 316
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPR 375
LR+PH CHLQYM NM SIASLVMAV++N D +LWGLVVCH+TSPR
Sbjct: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPR 376
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+RDAP IVTQSP
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSP 436
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVKCDGA L+Y + W +G+TP++ QL+DIA+WL H D TGLSTDSL +AGYPG
Sbjct: 437 NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RITSKD LFWFRS TA E++WGGAKH P KD+G +MHPRSSFKAF
Sbjct: 497 ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F+++E + + + + K++G+ EL +
Sbjct: 557 LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PI VD G +NGWN K++ELTGL +A+GK L+ +V + S
Sbjct: 617 VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLL-TLVEDSSVDI 675
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V+ ++ AL G+E++N++ +++ + + + ++VNAC SRD NV GVCFVGQDIT
Sbjct: 676 VKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDIT 735
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K++MDKF R++GDY+AI+Q+ NPLIPPIF +DE CSEWN AM +TGW R EV+ K
Sbjct: 736 GQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDK 795
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG CR+K Q+ ++L +TGQ +E FGFF R G++VE L S
Sbjct: 796 MLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVS 855
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
++ D EG V G FCF+Q+ +LQ AL Q L + ++K LAY+++++ NPL+GI F
Sbjct: 856 KKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIF 915
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
K++E + + Q++ L TS C+ Q+ I+D DL I EG
Sbjct: 916 SGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEG 958
>sp|P93528|PHYC_SORBI Phytochrome C OS=Sorghum bicolor GN=PHYC PE=2 SV=1
Length = 1135
Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/943 (53%), Positives = 654/943 (69%), Gaps = 35/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV---ISPPEGVPEEQITAYLSKIQRGGLIQ 94
++ DA L AEFE +S ++F+YS SV I P V ++ Y +QRG IQ
Sbjct: 25 VVAQTPVDAQLHAEFE---SSQRNFDYSSSVSAAIRP--SVSTSTVSTYHQTMQRGLYIQ 79
Query: 95 PFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSE---DFELNGLIGIDARTLFTPPSGASL 151
PFGC+LAV TF ++ YSEN EMLDL + D +G D RTLF S +L
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 152 AKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQ 211
KAA E++LLNPILVH+ R+ KPFYAILHRIDVG+VIDLEP D ++ AGA++
Sbjct: 140 HKAATFGEVNLLNPILVHA--RTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALK 197
Query: 212 SQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRS 271
S KLA AISRLQ+LP G++ LLCD +V +V +LTGYDRVM Y FH+D+HGEV+SE RRS
Sbjct: 198 SYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRS 257
Query: 272 DLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRS 331
DLEPYLG+H+PA DIPQA+RFLF +N+VRMICDC A V +IQ L QPL L STLR+
Sbjct: 258 DLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRA 317
Query: 332 PHGCHLQYMTNMGSIASLVMAVIINSKDS-------------MKLWGLVVCHHTSPRYIP 378
HGCH QYM NMGS+ASLVM+V I++ + KLWGLVVCHHTSPR++P
Sbjct: 318 SHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRKLWGLVVCHHTSPRFVP 377
Query: 379 FPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIM 438
FPLRYACEFL+Q F +QL E+++A Q E++ILRTQ LL DMLLRDAP I TQSP++M
Sbjct: 378 FPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWDMLLRDAPVGIFTQSPNVM 437
Query: 439 DLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAAL 498
DLVKCDG ALYY + L+G TP+ES++K IA WL NH TGLSTDSL EAGYPGAA
Sbjct: 438 DLVKCDGVALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAA 497
Query: 499 LGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGGKMHPRSSFKAFLE 557
L + VCGMA +I+SKDF+FWFRSHT KE+KWGGAKH P + DNG KMHPRSSFKAFLE
Sbjct: 498 LREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLE 557
Query: 558 VVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQ---QNGSKMQGVDELS 614
VVK RS PWE E++AIHSLQ+++R S Q+ E+ N + V+ + + K+QG+ EL
Sbjct: 558 VVKWRSVPWEDVEMDAIHSLQLILRGSLQD-EDANRNNVRSIVKAPPDDTKKIQGLLELR 616
Query: 615 SVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQG 674
+V EMVRLIETATAP+ VD +G INGWN K AELTGLP EA+G+ LID VV +S
Sbjct: 617 TVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVV-VDSIE 675
Query: 675 AVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDI 734
V+ ++ AL G E++N+E+KL+ F Q+ + + ++VN+C SRD V GVCFVGQD+
Sbjct: 676 VVKRILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDL 735
Query: 735 THEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIG 794
T +K++MDK+ R+QGDY AI+++ + LIPPIF ++ C EWN AM+K+TG R +VI
Sbjct: 736 TTQKMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVID 795
Query: 795 KMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTA 851
K+L E+F CR+K LTK IL+ I+GQ E FGFF+ G+++E LT
Sbjct: 796 KLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTV 855
Query: 852 SRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIR 911
++R +AEGK+ G CF+ + P+LQ AL+ Q + + KEL YI QE++NPLNG++
Sbjct: 856 NKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQ 915
Query: 912 FVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
F LLE S ++E QR+ L ++ C+ Q+ I+ DL IE+
Sbjct: 916 FTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQ 958
>sp|P14712|PHYA_ARATH Phytochrome A OS=Arabidopsis thaliana GN=PHYA PE=1 SV=2
Length = 1122
Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/962 (51%), Positives = 659/962 (68%), Gaps = 35/962 (3%)
Query: 21 PFKSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSV-ISPP--EGVP- 76
P +SS+ + + + II DA L A+FE+S G SF+YS SV ++ P E P
Sbjct: 6 PTQSSEGSRRSRHSAR-IIAQTTVDAKLHADFEES---GSSFDYSTSVRVTGPVVENQPP 61
Query: 77 --EEQITAYLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFE 130
++ T YL IQ+G LIQPFGC+LA++E TF++I YSEN E+L + S + +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 131 LNGLIGIDARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGI 190
+ G IG D R+LFT PS ++L KA ++SLLNPILVH R+ KPFYAI+HR+ I
Sbjct: 122 VLG-IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHC--RTSAKPFYAIIHRVTGSI 178
Query: 191 VIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDR 250
+ID EP K + ++ AGA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDR
Sbjct: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR 238
Query: 251 VMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPV 310
VM Y FH+DDHGEVVSE+ + LEPYLG+H+PA DIPQAARFLF +N+VRMI DC+A
Sbjct: 239 VMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHA 298
Query: 311 MVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------- 360
V+Q ++L L L STLR+PH CHLQYM NM SIASLVMAV++N +D
Sbjct: 299 RVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQ 358
Query: 361 ----MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQV 416
+LWGLVVCH+T+PR++PFPLRYACEFL Q F++ + E+++ Q+ EKNILRTQ
Sbjct: 359 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQT 418
Query: 417 LLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN 476
LLCDML+RDAP IV+QSP+IMDLVKCDGAAL Y + W +G TP+E L++IA WL
Sbjct: 419 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEY 478
Query: 477 HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH 536
H D TGLSTDSL +AG+P A LG +VCGMA RI+SKD +FWFRSHTA EV+WGGAKH
Sbjct: 479 HMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 538
Query: 537 PEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKV 596
P+ +D+ +MHPRSSFKAFLEVVK RS PW+ E++AIHSLQ+++R++F++ E + +
Sbjct: 539 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTK 598
Query: 597 QGNTQQNGSKMQGVDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPAS 656
++ N K+ G+ EL +V EMVRLIETAT PI VDS G +NGWN K+AELTGL
Sbjct: 599 VIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 658
Query: 657 EAMGKSLIDEVVHEESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACT 716
EA+GK + +V + S V+ ++ AL G E++NV+ +++ + + ++VNAC
Sbjct: 659 EAIGKHFL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACA 717
Query: 717 SRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSE 776
SRD NV GVCFV D+T +K +MDKF R++GDY+AIIQ+ NPLIPPIF +DE C+E
Sbjct: 718 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTE 777
Query: 777 WNAAMEKVTGWMRHEVIGKMLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENF 833
WN AM K+TG R EVI KML E+FG + CR+K Q+ I+L +T Q E
Sbjct: 778 WNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKV 837
Query: 834 PFGFFNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKI 893
F FF R G++VE L S++ D EG V G FCF+Q+ +LQ AL Q L + ++
Sbjct: 838 SFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRL 897
Query: 894 KELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIE 953
K LAYI+++++NPL+GI F K++E + + QR+ L+TS C++Q+ I+D DL I
Sbjct: 898 KALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESII 957
Query: 954 EG 955
EG
Sbjct: 958 EG 959
>sp|P06592|PHYA_CUCPE Phytochrome A OS=Cucurbita pepo GN=PHYA PE=2 SV=1
Length = 1124
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/943 (51%), Positives = 644/943 (68%), Gaps = 32/943 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
II + DA + A+FE+S G SF+YS SV + ++Q TAYL IQ+G
Sbjct: 22 IIAQTSVDANVQADFEES---GNSFDYSSSVRVTSDVSGDQQPRSDKVTTAYLHHIQKGK 78
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA+++ TF++I YSEN EML + S + D+ + G IG D RT+FT PS
Sbjct: 79 LIQPFGCLLALDDKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLG-IGTDVRTIFTAPS 137
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
++L KA E++LLNPILVH + KPFYAI+HR+ ++ID EP K + ++ A
Sbjct: 138 ASALLKALGFGEVTLLNPILVHCKTSG--KPFYAIVHRVTGSLIIDFEPVKPYEGPVTAA 195
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AI+RLQ+LP G + LCDT+V++V +LTGYDRVM Y FHDDDHGEV+SE
Sbjct: 196 GALQSYKLAAKAITRLQSLPSGSMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISE 255
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
+ + L+PYLG+H+PA DIPQAARFLF +N+VRMI DC A + V+Q ++L+ L L S
Sbjct: 256 VAKPGLQPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGS 315
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS------------MKLWGLVVCHHTSPR 375
TLR+PH CHLQYM NM SIASLVMAV++N D +LWGLVVCH++SPR
Sbjct: 316 TLRAPHSCHLQYMENMNSIASLVMAVVVNEGDEENEGPALQQQKRKRLWGLVVCHNSSPR 375
Query: 376 YIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSP 435
++PFPLRYACEFL Q F++ + EL++ Q+ EKNILRTQ LLCDML+RDAP IV++SP
Sbjct: 376 FVPFPLRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSP 435
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
+IMDLVK DGAAL Y + W +G+TP + QL DIA WL H D TGLSTDSL +AGYPG
Sbjct: 436 NIMDLVKSDGAALLYKKKIWRLGLTPNDFQLLDIASWLSEYHMDSTGLSTDSLYDAGYPG 495
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAF 555
A LG VCGMA RIT+ D +FWFRSHTA E++WGGAKH KD+ KMHPRSSFKAF
Sbjct: 496 AIALGDEVCGMAAVRITNNDMIFWFRSHTASEIRWGGAKHEHGQKDDARKMHPRSSFKAF 555
Query: 556 LEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSS 615
LEVVK RS PW+ E++AIHSLQ+++R++F++ + ++ T K++G EL S
Sbjct: 556 LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDTDATEINRKSIQTTLGDLKIEGRQELES 615
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PI VD G INGWN K+AELTGLP +A+GK L+ +V + S
Sbjct: 616 VTSEMVRLIETATVPILAVDLDGLINGWNTKIAELTGLPVDKAIGKHLL-TLVEDSSVEV 674
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V ++ AL G+E++NV+ +++ + + ++VNAC SRD + NV GV FV QDIT
Sbjct: 675 VRKMLFLALQGQEEQNVQFEIKTHGSHIEVGSISLVVNACASRDLRENVVGVFFVAQDIT 734
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K++MDKF RL+GDY+AI+Q+ NPLIPPIF SDE CSEWN AM K+TGW R EVI K
Sbjct: 735 GQKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDEFGWCSEWNPAMAKLTGWSREEVIDK 794
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML E+FG + CR+K Q+ I+L + GQ E FGF R G +VE L +
Sbjct: 795 MLLGEVFGVHKSCCRLKNQEAFVNLGIVLNNAMCGQDPEKASFGFLARNGMYVECLLCVN 854
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
+ D +G V G FCF+Q+ +LQ AL Q L + +++ L YI+++++NPL+GI F
Sbjct: 855 KILDKDGAVTGFFCFLQLPSHELQQALNIQRLCEQTALKRLRALGYIKRQIQNPLSGIIF 914
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
+LLE + + Q++ L TS C++QI ++D D+ I +G
Sbjct: 915 SRRLLERTELGVEQKELLRTSGLCQKQISKVLDESDIDKIIDG 957
>sp|P55141|PHYA_PETCR Phytochrome A OS=Petroselinum crispum GN=PHYA PE=2 SV=1
Length = 1129
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/943 (50%), Positives = 635/943 (67%), Gaps = 39/943 (4%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-----ISPPEGVPEEQIT-AYLSKIQRGGLIQPFGC 98
DA + A+FE+S G SF+YS SV + + ++T AYL IQ+G LIQP GC
Sbjct: 28 DAKIHADFEES---GNSFDYSSSVRVTSAVGENSSIQSNKLTTAYLHHIQKGKLIQPVGC 84
Query: 99 MLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+LAV+E +F+I+ YSEN EML + S + + + G IG D RT+FT PS A+L KA
Sbjct: 85 LLAVDEKSFKIMAYSENAPEMLTMVSHAVPSVGEHPVLG-IGTDVRTIFTAPSAAALQKA 143
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
+I+LLNPILVH + KPFYAI HR+ ++ID EP K + ++ AGA+QS K
Sbjct: 144 VGFTDINLLNPILVHCKTSG--KPFYAIAHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 201
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA A++RLQALPGG + LCDT+V++V +LTGYDRVM Y FHDDDHGEV +E+ + LE
Sbjct: 202 LASKAVNRLQALPGGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVTAEVTKPGLE 261
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PY G+H+PA D+PQAARFLF +N+VRMICDC A V+Q ++L L L STLR+PH
Sbjct: 262 PYFGLHYPATDVPQAARFLFLKNKVRMICDCRANSAPVLQDEKLPFELTLCGSTLRAPHS 321
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLR 382
CHLQYM NM SIASLVMAV+IN D S KLWGLVVCH+TSPR++PFPLR
Sbjct: 322 CHLQYMENMNSIASLVMAVVINDSDEVVESSDRNSVKSKKLWGLVVCHNTSPRFVPFPLR 381
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YACEFL Q F++ + EL++ Q+ EKNILRTQ LLCD+L+RDAP IV+QSP++MDLVK
Sbjct: 382 YACEFLAQVFAIHVSKELELENQIVEKNILRTQTLLCDLLMRDAPLGIVSQSPNMMDLVK 441
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + + +G TP++ QL+DI WL H D TGLSTDSL +AGYPGA LG
Sbjct: 442 CDGAALLYKNKVYRLGATPSDYQLRDIVSWLTEYHTDSTGLSTDSLYDAGYPGALALGDV 501
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA +ITS D LFWFRSH A ++WGGAK P+ +G KMHPRSSFKAFLEVVK R
Sbjct: 502 VCGMAVVKITSHDMLFWFRSHAAGHIRWGGAKAEPDENHDGRKMHPRSSFKAFLEVVKTR 561
Query: 563 SFPWEVSEINAIHSLQIVMRD--SFQEMEEENDSKVQGN-----TQQNGSKMQGVDELSS 615
S W+ E++AIHSLQ+++R S ++ +++ N T+ N K++G+ EL +
Sbjct: 562 STTWKEFEMDAIHSLQLILRKALSVEKAVAAQGDEIRSNTDVIHTKLNDLKIEGIQELEA 621
Query: 616 VACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGA 675
V EMVRLIETAT PIF VD+ +NGWN K+AELTGLP +AMGK L+ +V + S G
Sbjct: 622 VTSEMVRLIETATVPIFAVDADEIVNGWNTKIAELTGLPVDQAMGKHLL-TLVEDSSVGT 680
Query: 676 VENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDIT 735
V L+ AL G+E++ + + + + ++ + ++VNAC +R +NV GVCFV QD+T
Sbjct: 681 VVFLLALALQGKEEQGIPFEFKTYGSREDSVPITVVVNACATRGLHDNVVGVCFVAQDVT 740
Query: 736 HEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGK 795
+K +MDKF R+QGDY+AI+Q+ NPLIPPIF +DE CSEWN AM +++GW R +V+ K
Sbjct: 741 SQKTIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMTELSGWRREDVMNK 800
Query: 796 MLPREIFG---NFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALTAS 852
ML EIFG + C +K ++ ++L +TGQ +E F FF G++VE L AS
Sbjct: 801 MLLGEIFGIQTSCCHLKSKEAFVNLGVVLNNALTGQISEKICFSFFATDGKYVECLLCAS 860
Query: 853 RRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRF 912
++ EG V G FCF+Q+ +LQ AL Q L + ++K L+Y+R++ KNPL GI F
Sbjct: 861 KKLHGEGTVTGIFCFLQLASQELQQALHIQRLTEQTAMKRLKTLSYLRRQAKNPLCGINF 920
Query: 913 VHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
V + LE + E Q + TS C+R + I+D DL I +G
Sbjct: 921 VREKLEEIGMGEEQTKLFRTSVHCQRHVNKILDDTDLDSIIDG 963
>sp|P14714|PHYC_ARATH Phytochrome C OS=Arabidopsis thaliana GN=PHYC PE=1 SV=1
Length = 1111
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/932 (51%), Positives = 644/932 (69%), Gaps = 32/932 (3%)
Query: 45 DAGLLAEFEQSVASGKSFNYSRSV-ISPPEG---VPEEQITAYLSKIQRGGLIQPFGCML 100
DA L FE+S + F+YS S+ ++ P +P ++ YL KIQRG LIQPFGC++
Sbjct: 26 DAKLHGNFEES---ERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGCLI 82
Query: 101 AVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGASLAKAAAS 157
V+E ++I +SEN EML L S + IG D ++LF P ++L KA
Sbjct: 83 VVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTDVKSLFLSPGCSALEKAVDF 142
Query: 158 REISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAV 217
EIS+LNPI +H RS KPFYAILHRI+ G+VIDLEP + ++ AGA++S KLA
Sbjct: 143 GEISILNPITLHC--RSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYKLAA 200
Query: 218 SAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYL 277
+ISRLQALP G++ LLCD +V++V +LTGYDRVM+Y FH+D HGEV++E R D+EPYL
Sbjct: 201 KSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDMEPYL 260
Query: 278 GIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHGCHL 337
G+H+ A DIPQA+RFLF +N+VRMICDC A+PV V+Q K L QP+ L STLR+PHGCH
Sbjct: 261 GLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHGCHA 320
Query: 338 QYMTNMGSIASLVMAVIINSKDS----------MKLWGLVVCHHTSPRYIPFPLRYACEF 387
QYM+NMGS+ASLVM+V IN DS LWGLVVCHH SPR++PFPLRYACEF
Sbjct: 321 QYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYACEF 380
Query: 388 LVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAA 447
L Q F +Q+ E + A+ L EK IL+TQ +LCDML R+AP IVTQSP+IMDLVKCDGAA
Sbjct: 381 LTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCDGAA 440
Query: 448 LYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQAVCGMA 507
LYY W +GVTPTE+Q++D+ W+L +HG TG +T+SL E+GYP A++LG+++CGMA
Sbjct: 441 LYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESICGMA 500
Query: 508 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWE 567
I+ KDFLFWFRS TAK++KWGGA+H P +D G +MHPRSSFKAF+E+V+ +S PW+
Sbjct: 501 AVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWKSVPWD 559
Query: 568 VSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDELSSVACEMVRLIETA 627
E++AI+SLQ++++ S Q E SK + +++Q VDEL + EMVRLI+TA
Sbjct: 560 DMEMDAINSLQLIIKGSLQ----EEHSKTVVDVPLVDNRVQKVDELCVIVNEMVRLIDTA 615
Query: 628 TAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGE 687
PIF VD+SG INGWN+K AE+TGL +A+GK + D +V ++S V+N++ AL G
Sbjct: 616 AVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSD-LVEDDSVETVKNMLALALEGS 674
Query: 688 EDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRL 747
E++ E+++R F +++ S V ++VN C SRD NNV GVCF+GQD+T +K L + + R+
Sbjct: 675 EERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKTLTENYSRV 734
Query: 748 QGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGN--- 804
+GDY I+ S + LIPPIF ++EN CSEWN AM+K++G R EV+ K+L E+F
Sbjct: 735 KGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTDDY 794
Query: 805 FCRMKGQDMLTKFMILLYQGITGQ-GTENFPFGFFNRQGQFVEVALTASRRTDAEGKVIG 863
C +K D LTK I I+GQ E FGF++R G F+E L+A++RTD EGKV G
Sbjct: 795 GCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALLSANKRTDIEGKVTG 854
Query: 864 CFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSIS 923
CF+Q+ P+LQ AL+ Q + + I + +LAY+R EVK+P I F+ LL SS +S
Sbjct: 855 VLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLS 914
Query: 924 ENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
E+Q++ L TS C Q+ +I D+ IEEG
Sbjct: 915 EDQKRLLRTSVLCREQLAKVISDSDIEGIEEG 946
>sp|P93526|PHYA_SORBI Phytochrome a OS=Sorghum bicolor GN=PHYA PE=2 SV=1
Length = 1131
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/941 (49%), Positives = 630/941 (66%), Gaps = 40/941 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ------ITAYLSKIQRGG 91
I+ DA L AE+E+S G SF+YS+ ++ P EQ + AYL IQRG
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSK-LVEAQRSTPSEQQGRSGKVIAYLQHIQRGK 79
Query: 92 LIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPS 147
LIQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 80 LIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPG 138
Query: 148 GASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLA 207
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + A
Sbjct: 139 ATALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAA 196
Query: 208 GAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSE 267
GA+QS KLA AIS++Q+LPGG + LC+TVV++V +LTGYDRVM Y FH+D+HGEV +E
Sbjct: 197 GALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAE 256
Query: 268 IRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNS 327
I + +EPYLG+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L S
Sbjct: 257 ITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGS 316
Query: 328 TLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHT 372
TLR+PH CHLQYM NM SIASLVMAV++N + +LWGL+VCHH
Sbjct: 317 TLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHE 376
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIV 431
SPRY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DML ++A P SIV
Sbjct: 377 SPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIV 436
Query: 432 TQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEA 491
+ SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +A
Sbjct: 437 SGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDA 496
Query: 492 GYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSS 551
GYPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR S
Sbjct: 497 GYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLS 556
Query: 552 FKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGV 610
FKAFLEVVK +S PW E++AIHSLQ+++R + + + + G Q G K+ G+
Sbjct: 557 FKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKP--VQASGLDNQIGDLKLDGL 614
Query: 611 DELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHE 670
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 615 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVED 673
Query: 671 ESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFV 730
S V+ ++ AL G+E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 674 SSVSIVQRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFV 733
Query: 731 GQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRH 790
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWN AM K+TGW R
Sbjct: 734 AQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRD 793
Query: 791 EVIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEV 847
EVI KML E+F + C +K +D + I++ + G+ EN PFG F+R G+++E
Sbjct: 794 EVIDKMLLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIEC 853
Query: 848 ALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPL 907
L+ +R+ +A+G V G FCF+ + DLQ AL Q + ++K +Y+R + PL
Sbjct: 854 LLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPL 913
Query: 908 NGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+G+ + + L+S+ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 914 SGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLD 954
>sp|P19862|PHYA1_MAIZE Phytochrome A OS=Zea mays GN=PHYA1 PE=3 SV=1
Length = 1131
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/940 (49%), Positives = 626/940 (66%), Gaps = 38/940 (4%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQ-----ITAYLSKIQRGGL 92
I+ DA L AE+E+S G SF+YS+ V + PE+Q + AYL IQRG L
Sbjct: 24 ILAQTTLDAELNAEYEES---GDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKL 80
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSG 148
IQPFGC+LA++E +FR+I +SEN EML S + +D G IG + R+LFT P
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLG-IGTNVRSLFTDPGA 139
Query: 149 ASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAG 208
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AG
Sbjct: 140 TALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAG 197
Query: 209 AVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEI 268
A+QS KLA AIS++Q+LPGG + LC+TVV++V LTGYDRVM Y FH+D+HGEV +EI
Sbjct: 198 ALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEI 257
Query: 269 RRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNST 328
+ +EPY+G+H+PA DIPQAARFLF +N+VRMICDC A V +I+ + L + L ST
Sbjct: 258 TKPGIEPYIGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGST 317
Query: 329 LRSPHGCHLQYMTNMGSIASLVMAVIINSK---------------DSMKLWGLVVCHHTS 373
LR+PH CHL+YM NM SIASLVMAV++N +LWGL+VCHH S
Sbjct: 318 LRAPHSCHLKYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQQQKKKRLWGLIVCHHES 377
Query: 374 PRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVT 432
PRY+PFPLRYACEFL Q F++ + E ++ Q+ EKNILR Q +L DML +++ P SIV+
Sbjct: 378 PRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKNILRMQTMLSDMLFKESSPLSIVS 437
Query: 433 QSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
SP+IMDLVKCDGAAL YG + W + PTESQ++DIA+WL HGD TGLSTDSL +AG
Sbjct: 438 GSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAG 497
Query: 493 YPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSF 552
YPGAA LG +CGMA A+ITSKD LFWFRSHTA E+KWGGAKH P KD+ +MHPR SF
Sbjct: 498 YPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSF 557
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGS-KMQGVD 611
KAFLEVVK +S PW E++AIHSLQ+++R + + + ++ G Q G K+ G+
Sbjct: 558 KAFLEVVKTKSLPWSDYEMDAIHSLQLILRGTLNDASKP--AQASGLDNQIGDLKLDGLA 615
Query: 612 ELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEE 671
EL +V EMVRL+ETAT PI VD +G +NGWN KVAEL+GL EA+G+ ++ +V +
Sbjct: 616 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHIL-TLVEDS 674
Query: 672 SQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVG 731
S V+ ++ AL G E+K V +L+ ++ V ++VNAC SRD ++V GVCFV
Sbjct: 675 SVSLVQRMLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVA 734
Query: 732 QDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHE 791
QD+T K++MDKF R++GDY+AII + NPLIPPIF +D+ CSEWNAAM K+TGW R E
Sbjct: 735 QDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDE 794
Query: 792 VIGKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVA 848
V+ KML E+F + C +K +D + I++ + G+ E FGFF+R ++VE
Sbjct: 795 VVDKMLLGEVFNSSNASCLLKSKDAFVRLCIVINSALAGEEAEKASFGFFDRNEKYVECL 854
Query: 849 LTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLN 908
L+ +R+ +A+G V G FCF+ + DLQ AL Q + K+K +Y+R + PL+
Sbjct: 855 LSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRKLKAFSYMRHAINKPLS 914
Query: 909 GIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
G+ + + L+S+ ++E Q + + D C RQ+ I+ +D
Sbjct: 915 GMLYSRETLKSTGLNEEQMRQVRVGDNCHRQLNKILADLD 954
>sp|P42500|PHYA_SOYBN Phytochrome A OS=Glycine max GN=PHYA PE=2 SV=1
Length = 1131
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/945 (49%), Positives = 633/945 (66%), Gaps = 37/945 (3%)
Query: 43 NADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITAYLSKIQRGGLIQPFGCMLAV 102
DA + A FE+S +S + R V +GV + + + RG +IQPFGC+LA+
Sbjct: 26 TVDAKIHATFEESGSSFDYSSSVR-VSGTADGVNQPRSDKVTTAYLRGKMIQPFGCLLAI 84
Query: 103 EEP----TFRIIGYSENCLEMLDLRSRS----EDFELNGLIGIDARTLFTPPSGASLAKA 154
+E T ++I YSEN EML + S + D G IG D +TLFT PS + L KA
Sbjct: 85 DEKNHMQTCKVIAYSENEPEMLTMVSHAVPSVGDHPALG-IGTDIKTLFTAPSVSGLQKA 143
Query: 155 AASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGAVQSQK 214
++SLLNPILVH + KPFYAI+HR+ +++D EP K + ++ AGA+QS K
Sbjct: 144 LGCADVSLLNPILVHCKTSG--KPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYK 201
Query: 215 LAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLE 274
LA AI+RLQ+LP G++ LCDT+V++V +LTGYDRVM Y FH+DDHGEV+ EI + LE
Sbjct: 202 LAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIREITKPCLE 261
Query: 275 PYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSPHG 334
PYLG+H+PA DIPQA+RFLF++N+VRMI DCHA V V+Q ++L+ L L STLR+PH
Sbjct: 262 PYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHS 321
Query: 335 CHLQYMTNMGSIASLVMAVIINSKD------------SMKLWGLVVCHHTSPRYIPFPLR 382
CH QYM NM SIASLV+AV++N + + +LWGLVVCH+T+PR++PFPLR
Sbjct: 322 CHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKTERLWGLVVCHNTTPRFVPFPLR 381
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVK 442
YA EFL Q F+ ++ E+++ Q+ EKNIL L ML+RDAP I ++SP+IMDLVK
Sbjct: 382 YAREFLPQVFADHVHKEIELEYQIIEKNILHHPGHLLCMLMRDAPLGIASESPNIMDLVK 441
Query: 443 CDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPGAALLGQA 502
CDGAAL Y + W +GVTP+E Q+++IA WL H D T STDSL +AG+P A LG
Sbjct: 442 CDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTSFSTDSLFDAGFPSALSLGDV 501
Query: 503 VCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFKAFLEVVKNR 562
VCGMA+ R+T+KD +FWFRSHTA E++WGGAKH KD+ +MHPRSSFKAFLEVVK R
Sbjct: 502 VCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKAR 561
Query: 563 SFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQG-NTQQNGSKMQGVD--------EL 613
S PW+ E++AIHSLQI++R++F+E E D + NT+ K++G++ EL
Sbjct: 562 SLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLRDLKIEGINDLKIERMQEL 621
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V E+VRL TAT PI VD G +NGWN K+AELTGLP EA GK L+ +V + S
Sbjct: 622 EAVTSEIVRLDYTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLL-TLVEDSST 680
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ ALLGEE+KNV+ +++ + + ++VN C SRD ++NV GVCFV D
Sbjct: 681 DRVKKMLNLALLGEEEKNVQFEIKTLGSKMDSGPISLVVNRCASRDLRDNVVGVCFVAHD 740
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
IT +K +MDKFIR++GDY+AI+Q+ NPLIPPIF +DE C EWN AM K+TGW R EV+
Sbjct: 741 ITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEVM 800
Query: 794 GKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML EIFG CR+K Q+ ++L + +TG TE PFGFF R G++VE L+
Sbjct: 801 DKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLLS 860
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
S++ D EG V G FCF+Q+ P+LQ AL Q L + ++ L+Y++++++NPL GI
Sbjct: 861 VSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCGI 920
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEEG 955
F K+LE + + Q+Q L TS C++Q+ I+D DL I +G
Sbjct: 921 VFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDG 965
>sp|Q10DU0|PHYA_ORYSJ Phytochrome A OS=Oryza sativa subsp. japonica GN=PHYA PE=2 SV=1
Length = 1128
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/938 (49%), Positives = 625/938 (66%), Gaps = 34/938 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV-----ISPPEGVPEEQITAYLSKIQRGGL 92
I+ DA L AE+E+ G SF+YS+ V P + E++ AYL IQR L
Sbjct: 24 ILAQTTLDAELNAEYEEY---GDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKL 80
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGA 149
IQPFGC+LA++E TF +I SEN EML S S D IG + +LFT P
Sbjct: 81 IQPFGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVWSLFTDPGAT 140
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AGA
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAGA 198
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
+QS KLA AIS++Q+LPGG + +LC+TVV+++ LTGYDRVM Y FH+DDHGEV +EI
Sbjct: 199 LQSYKLAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEIT 258
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A + +I+ + L + L STL
Sbjct: 259 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTL 318
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHTSP 374
R+PH CHLQYM NM SIASLVMAV++N + KLWGL+VCHH SP
Sbjct: 319 RAPHSCHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESP 378
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRD-APFSIVTQ 433
RY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DMLLR+ +P SIV+
Sbjct: 379 RYVPFPLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSG 438
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
+P+IMDLVKCDGAAL YGG+ W + PTESQ++DIA+WL + H D TGLSTDSL +AGY
Sbjct: 439 TPNIMDLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGY 498
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGAA LG +CGMA A+I SKD LFWFRSHTA E++WGGAKH P KD+ +MHPR SFK
Sbjct: 499 PGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFK 558
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVVK +S PW E++AIHSLQ+++R + + + + N Q K+ G+ EL
Sbjct: 559 AFLEVVKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDN-QVGDLKLDGLAEL 617
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V EMVRL+ETAT PI VDS+G +NGWN KVAELTGL EA+G+ ++ V E S
Sbjct: 618 QAVTSEMVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHILTVVE-ESSV 676
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ AL G+E+K V+ +++ ++ V ++VNAC SRD ++V GVCFV QD
Sbjct: 677 PVVQRMLYLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 736
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
+T K++MDKF R++GDY+AII + +PLIPPIF +DE CSEWNAAM K+TGW R EVI
Sbjct: 737 MTVHKLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVI 796
Query: 794 GKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML E+F + C +K +D IL+ + G TE PF FF+R G+++E L+
Sbjct: 797 NKMLLGEVFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLS 856
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
+R+ +A+G + G FCF+Q+ +LQ AL Q + K+K +Y+R + NPL+G+
Sbjct: 857 VNRKVNADGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGM 916
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+ K L+++ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 917 LYSRKALKNTGLNEEQMKEVNVADSCHRQLNKILSDLD 954
>sp|A2XLG5|PHYA_ORYSI Phytochrome A OS=Oryza sativa subsp. indica GN=PHYA PE=2 SV=2
Length = 1128
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/938 (49%), Positives = 625/938 (66%), Gaps = 34/938 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSV-----ISPPEGVPEEQITAYLSKIQRGGL 92
I+ DA L AE+E+ G SF+YS+ V P + E++ AYL IQR L
Sbjct: 24 ILAQTTLDAELNAEYEEY---GDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKL 80
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGA 149
IQPFGC+LA++E TF +I SEN EML S S D IG + +LFT P
Sbjct: 81 IQPFGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVWSLFTDPGAT 140
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AGA
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAGA 198
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
+QS KLA AIS++Q+LPGG + +LC+TVV+++ LTGYDRVM Y FH+DDHGEV +EI
Sbjct: 199 LQSYKLAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEIT 258
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A + +I+ + L + L STL
Sbjct: 259 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTL 318
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVIINSKDS---------------MKLWGLVVCHHTSP 374
R+PH CHLQYM NM SIASLVMAV++N + KLWGL+VCHH SP
Sbjct: 319 RAPHSCHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESP 378
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRD-APFSIVTQ 433
RY+PFPLRYACEFL Q F++ + E ++ Q+ EK+ILR Q +L DMLLR+ +P SIV+
Sbjct: 379 RYVPFPLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSG 438
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
+P+IMDLVKCDGAAL YGG+ W + PTESQ++DIA+WL + H D TGLSTDSL +AGY
Sbjct: 439 TPNIMDLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGY 498
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGAA LG +CGMA A+I SKD LFWFRSHTA E++WGGAKH P KD+ +MHPR SFK
Sbjct: 499 PGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFK 558
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVVK +S PW E++AIHSLQ+++R + + + + N Q K+ G+ EL
Sbjct: 559 AFLEVVKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDN-QVGDLKLDGLAEL 617
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V EMVRL+ETAT PI VDS+G +NGWN KVAELTGL EA+G+ ++ V E S
Sbjct: 618 QAVTSEMVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHILTVVE-ESSV 676
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ AL G+E+K V+ +++ ++ V ++VNAC SRD ++V GVCFV QD
Sbjct: 677 PVVQRMLYLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 736
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
+T K++MDKF R++GDY+AII + +PLIPPIF +DE CSEWNAAM K+TGW R EVI
Sbjct: 737 MTVHKLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVI 796
Query: 794 GKMLPREIFGNF---CRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML E+F + C +K +D IL+ + G TE PF FF+R G+++E L+
Sbjct: 797 NKMLLGEVFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLS 856
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
+R+ +A+G + G FCF+Q+ +LQ AL Q + K+K +Y+R + NPL+G+
Sbjct: 857 VNRKVNADGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGM 916
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMD 948
+ K L+++ ++E Q + + +D+C RQ+ I+ +D
Sbjct: 917 LYSRKALKNTGLNEEQMKEVNVADSCHRQLNKILSDLD 954
>sp|P25848|PHY1_CERPU Light-sensor Protein kinase OS=Ceratodon purpureus GN=PHY1 PE=3
SV=3
Length = 1307
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/772 (58%), Positives = 568/772 (73%), Gaps = 16/772 (2%)
Query: 23 KSSDAKMKPVNKGKTIIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVPEEQITA 82
K+ + +K + ADA L A +E S SG SF+YS+SV E VP +TA
Sbjct: 6 KTYSSTTSAKSKHSVRVAQTTADAALEAVYEMSGDSGDSFDYSKSVGQSAESVPAGAVTA 65
Query: 83 YLSKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDL--RSRSEDFELNGL-IGIDA 139
YL ++QR GLIQ FGCM+AVEEP F +I YSEN E LDL ++ E++ L IG D
Sbjct: 66 YLQRMQREGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSMGEMDVLGIGTDI 125
Query: 140 RTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKS 199
RTLFTP S A+L KAAA+++ISLLNPI VH R KP YAI HRID+GIVID E K
Sbjct: 126 RTLFTPSSSAALEKAAATQDISLLNPITVHC--RRSGKPLYAIAHRIDIGIVIDFEAVKM 183
Query: 200 GD-PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHD 258
D P + AGA+QS KLA AI+RLQALPGGDI LLCDT+VE+V++LTGYDRVM + FH+
Sbjct: 184 IDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGYDRVMAFKFHE 243
Query: 259 DDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKEL 318
D+HGEVV+EIRR DLEPY+G+H+PA DIPQA+RFL +NRVR+I DC+A PV +IQ ++
Sbjct: 244 DEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYASPVKLIQDPDI 303
Query: 319 KQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSM---------KLWGLVVC 369
+QP+ L STLR+PHGCH QYM NMGSIASLVMAVIIN + KLWGLVVC
Sbjct: 304 RQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAIQRGRKLWGLVVC 363
Query: 370 HHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPFS 429
HTSPR +PFPLR CEFL+Q F +QL + +++A QL EK+ILRTQ LLCDMLLRDAP
Sbjct: 364 QHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELAAQLREKHILRTQTLLCDMLLRDAPIG 423
Query: 430 IVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLA 489
IV+Q+P+IMDLVKCDGAALYYG R WL+G TPTE+Q+K+IA WLL +H D TGLSTDSLA
Sbjct: 424 IVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHNDSTGLSTDSLA 483
Query: 490 EAGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPR 549
+A YPGA LLG AVCGMA A+IT+KDFLFWFRSHTA EVKWGGAKH P+ KD+G KMHPR
Sbjct: 484 DANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPDEKDDGRKMHPR 543
Query: 550 SSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQG 609
SSFKAFLEVV RS PWE E++AIHSLQ+++R SF+++ ++D+K + + N K+QG
Sbjct: 544 SSFKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDI-ADSDTKTMIHARLNDLKLQG 602
Query: 610 VDELSSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVH 669
V+E +++A EM R++ETA API VDS G IN WNAK+A++TGLP EAM SL ++V
Sbjct: 603 VEERNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEEAMHCSLTKDLVL 662
Query: 670 EESQGAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCF 729
+ES VE L+ AL GEE++NVE+KL+ F Q V ++VNAC SRD + V GV F
Sbjct: 663 DESVVVVERLLSLALQGEEEQNVEIKLKTFGTQTTERAVILIVNACCSRDASDFVVGVFF 722
Query: 730 VGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAM 781
VGQD+T +++ MD+F R+QG + +Q +PL+ P F DE + N+A+
Sbjct: 723 VGQDVTEQRMFMDRFTRIQGGEKTTVQDPHPLMRPSFDGDEFGRTFKRNSAL 774
>sp|P06593|PHYA3_AVESA Phytochrome A type 3 OS=Avena sativa GN=PHYA3 PE=1 SV=3
Length = 1129
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/944 (48%), Positives = 621/944 (65%), Gaps = 34/944 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVP-----EEQITAYLSKIQRGGL 92
++ DA L AE+E+S G SF+YS+ V + +G P E++ AYL IQ+G L
Sbjct: 22 VLAQTTLDAELNAEYEES---GDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKL 78
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGA 149
IQ FGC+LA++E +F +I +SEN EML S S D IG + R+LF+
Sbjct: 79 IQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AGA
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAGA 196
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
+QS KLA AIS++Q+LPGG + +LC+TVV++V LTGYDRVM Y FH+DDHGEV SEI
Sbjct: 197 LQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEIT 256
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+ LEPYLG+H+PA DIPQAAR LF +N+VRMICDC A + VI+++ L + L S L
Sbjct: 257 KPGLEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSAL 316
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVII---------------NSKDSMKLWGLVVCHHTSP 374
R+PH CHLQYM NM SIASLVMAV++ + KLWGL+VCHH SP
Sbjct: 317 RAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESP 376
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVTQ 433
RY+PFPLRYACEFL Q F++ + E ++ QL EKNIL+ Q +L DML R+A P +IV+
Sbjct: 377 RYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSG 436
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
+P+IMDLVKCDGAAL YGG+ W + PTESQ+ DIA+WL + H D TGLSTDSL +AGY
Sbjct: 437 TPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGY 496
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGAA LG +CGMA A+I SKD LFWFRSHTA E++WGGAK+ P D+ +MHPR SFK
Sbjct: 497 PGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFK 556
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVVK +S PW E++AIHSLQ+++R + + + N Q K+ G+ EL
Sbjct: 557 AFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDN-QIGDLKLDGLAEL 615
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V + S
Sbjct: 616 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEDSSV 674
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV QD
Sbjct: 675 PVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGVCFVAQD 734
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
+T K++MDKF R++GDY+AII + NPLIPPIF +DE CSEWNAAM K+TGW R EV+
Sbjct: 735 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVL 794
Query: 794 GKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML E+F + C +K +D +L+ + G+ TE PFGFF+R G+++E L+
Sbjct: 795 DKMLLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLS 854
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
A+R+ + G + G FCF+ + +LQ AL+ Q + ++K +Y+R + NPL+G+
Sbjct: 855 ANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGM 914
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
+ K L+++ ++E Q + + D C QI I+ +D I E
Sbjct: 915 LYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITE 958
>sp|P06594|PHYA4_AVESA Phytochrome A type 4 OS=Avena sativa GN=PHYA4 PE=1 SV=3
Length = 1129
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/944 (48%), Positives = 621/944 (65%), Gaps = 34/944 (3%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVP-----EEQITAYLSKIQRGGL 92
++ DA L AE+E+S G SF+YS+ V + +G P E++ AYL IQ+G L
Sbjct: 22 VLAQTTLDAELNAEYEES---GDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKL 78
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGA 149
IQ FGCMLA++E +F +I +SEN EML S S D IG + R+LF+
Sbjct: 79 IQTFGCMLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AGA
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAGA 196
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
+QS KLA AIS++Q+LPGG + +LC+TVV++V LTGYDRVM Y FH+DDHGEV +EI
Sbjct: 197 LQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEIT 256
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A + VI+++ L + L S L
Sbjct: 257 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSAL 316
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVII---------------NSKDSMKLWGLVVCHHTSP 374
R+PH CHLQYM NM SIASLVMAV++ + KLWGL+VCHH SP
Sbjct: 317 RAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQQKKKLWGLLVCHHESP 376
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVTQ 433
RY+PFPLRYACEFL Q F++ + E ++ QL EK+IL+ Q +L DML R+A P +IV+
Sbjct: 377 RYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKSILKMQTMLSDMLFREASPLTIVSG 436
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGY 493
+P+IMDLVKCDGAAL YGG+ W + PTESQ+ DIA+WL + H D TGLSTDSL +AGY
Sbjct: 437 APNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGY 496
Query: 494 PGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEHKDNGGKMHPRSSFK 553
PGA+ LG +CGMA A+I SKD +FWFRSHTA E++WGGAKH D+ +MHPR SFK
Sbjct: 497 PGASALGDMICGMAVAKINSKDIIFWFRSHTAAEIRWGGAKHDSSDMDDSRRMHPRLSFK 556
Query: 554 AFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSKVQGNTQQNGSKMQGVDEL 613
AFLEVVK +S PW E++AIHSLQ+++R + + + N Q K+ G+ EL
Sbjct: 557 AFLEVVKMKSLPWTDYEMDAIHSLQLILRGTLNDASKPKREASLDN-QIGDLKLDGLAEL 615
Query: 614 SSVACEMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQ 673
+V EMVRL+ETAT PI VD +G +NGWN K AELTGL +A+G+ ++ +V E S
Sbjct: 616 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHIL-TLVEESSV 674
Query: 674 GAVENLICRALLGEEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQD 733
V+ ++ AL G+E+K V +++ ++ V ++VNAC SRD ++V GVCFV QD
Sbjct: 675 PVVQRMLYLALQGKEEKEVRFEVKTHGPRRDDGPVILVVNACASRDLHDHVVGVCFVAQD 734
Query: 734 ITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVI 793
+T K++MDKF R++GDY+AII + NPLIPPIF +DE CSEWNAAM K+TGW R EV+
Sbjct: 735 MTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVL 794
Query: 794 GKMLPREIFGN---FCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVALT 850
KML E+F + C +K ++ +L+ + G+ TE PFGFF+R G+++E L+
Sbjct: 795 DKMLLGEVFDSSNASCPLKNKNAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLS 854
Query: 851 ASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVKNPLNGI 910
A+R+ + G + G FCF+ + +LQ AL+ Q + ++K +Y+R + NPL+G+
Sbjct: 855 ANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGM 914
Query: 911 RFVHKLLESSSISENQRQYLETSDACERQIMTIIDGMDLRCIEE 954
+ K L+++ ++E Q + + D C QI I+ +D I E
Sbjct: 915 LYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSISE 958
>sp|P06595|PHYA5_AVESA Phytochrome A type 5 (Fragment) OS=Avena sativa GN=PHYA5 PE=1 SV=3
Length = 495
Score = 482 bits (1241), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/479 (52%), Positives = 323/479 (67%), Gaps = 29/479 (6%)
Query: 38 IIDHYNADAGLLAEFEQSVASGKSFNYSRSVISPPEGVP-----EEQITAYLSKIQRGGL 92
++ DA L AE+E+S G SF+YS+ V + +G P E++ AYL IQ+G L
Sbjct: 22 VLAQTTLDAELNAEYEES---GDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKL 78
Query: 93 IQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSR---SEDFELNGLIGIDARTLFTPPSGA 149
IQ FGC+LA++E +F +I +SEN EML S S D IG + R+LF+
Sbjct: 79 IQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 150 SLAKAAASREISLLNPILVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPALSLAGA 209
+L KA ++SLLNPILV + KPFYAI+HR +V+D EP K + + AGA
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSG--KPFYAIVHRATGCLVVDFEPVKPTEFPATAAGA 196
Query: 210 VQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIR 269
+QS KLA AIS++Q+LPGG + +LC+TVV++V LTGYDRVM Y FH+DDHGEV SEI
Sbjct: 197 LQSYKLAAKAISKIQSLPGGSMEMLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEIT 256
Query: 270 RSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTL 329
+ LEPYLG+H+PA DIPQAARFLF +N+VRMICDC A + VI+++ L + L S L
Sbjct: 257 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSAL 316
Query: 330 RSPHGCHLQYMTNMGSIASLVMAVII---------------NSKDSMKLWGLVVCHHTSP 374
R+PH CHLQYM NM SIASLVMAV++ + KLWGL+VCHH SP
Sbjct: 317 RAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESP 376
Query: 375 RYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDA-PFSIVTQ 433
RY+PFPLRYACEFL Q F++ + E ++ QL EKNIL+ Q +L DML R+A P +IV+
Sbjct: 377 RYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSG 436
Query: 434 SPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAG 492
+P+IMDLVKCDGAAL YGG+ W + PTESQ+ DIA+WL + H D TGLSTDSL +AG
Sbjct: 437 NPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAG 495
>sp|Q9LCC2|PHYA_NOSS1 Cyanobacterial phytochrome A OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=aphA PE=3 SV=1
Length = 765
Score = 263 bits (673), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 172/522 (32%), Positives = 268/522 (51%), Gaps = 49/522 (9%)
Query: 85 SKIQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLD------LRSRSEDFELNGLIGID 138
+ I G IQP G +L +EEP +I+ S N +L L+ + ED +D
Sbjct: 18 APIHLSGQIQPHGVLLVLEEPGLKILQVSNNTWGILGINAENILQKKLEDL-------LD 70
Query: 139 ARTLFTPPSGASLAKAAASREISLLNPILVHSNSRSIEKP-FYAILHRIDVG-IVIDLEP 196
+ + SG S S + +NP + + + F A+ HR G ++++LEP
Sbjct: 71 SFQIERIQSGLS------SGNLEFINPTKIWIRKKGDDYAVFDAVFHRNTEGFLILELEP 124
Query: 197 SKSGD--PALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLY 254
+ + + P LS LA ++I++LQ ++ C +V++V+K+T +DRVMLY
Sbjct: 125 AITQENIPFLSFY------HLAKASINQLQK--TANLRDFCQIIVQEVRKVTDFDRVMLY 176
Query: 255 NFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQ 314
F DD HG V++E + LEPYLG+H+P +DIP+ AR LF N +R+I + A + +I
Sbjct: 177 KFDDDGHGSVIAEEKLDSLEPYLGLHYPESDIPKPARKLFISNSIRVIPNAQAQAIQMIP 236
Query: 315 SKE--LKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHT 372
+ +P+ L NS LRS CHL+Y+ NMG ASL +++I KD+ KLWGL+ CHH
Sbjct: 237 ALNPVSDRPVDLTNSILRSAANCHLEYLHNMGVGASLTISLI---KDN-KLWGLIACHHL 292
Query: 373 SPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPF--SI 430
S +Y+ + LR ACEFL + ++ + N+ Q LL + + ++ F +
Sbjct: 293 SAKYVSYELRKACEFLGRVIFAEISAREETEDYDYRMNLTHIQSLLVEYMSQEDNFVDGL 352
Query: 431 VTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAE 490
+ PS++DL GAA+ +G C L+G TP L + WL NN + TDSL +
Sbjct: 353 IKHQPSLLDLTSAQGAAVCFGDHCTLIGETPKAEDLVFLVQWLKNNVEEEV-FYTDSLPQ 411
Query: 491 AGYPGAALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHP---EHKDNGGKMH 547
YP A G+ I+ ++++ WFR + V WGG + P D ++
Sbjct: 412 V-YPDAERYKNVASGLLAIPISQRNYVLWFRPEVIQTVNWGGDPNQPFEVNKLDGNVRLC 470
Query: 548 PRSSFKAFLEVVKNRSFPWEVSEINAIHSLQ-----IVMRDS 584
PR SF+ + E V+ S PW EI A L+ IV+R +
Sbjct: 471 PRKSFELWKETVRLTSLPWRYVEIRAALELRKAIVNIVLRQA 512
>sp|Q55168|PHY1_SYNY3 Phytochrome-like protein cph1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=cph1 PE=1 SV=1
Length = 748
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 261/506 (51%), Gaps = 38/506 (7%)
Query: 87 IQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGLIGIDARTLFTPP 146
I LIQP G ++ ++EP I S NC +L RS + L +G + P
Sbjct: 20 IHTAHLIQPHGLVVVLQEPDLTISQISANCTGIL---GRSPEDLLGRTLGEVFDSFQIDP 76
Query: 147 SGASLAKAAASREISLLNPILVHSNSRSIE-KPFYAILHRIDVGIVI-DLEPSKSGDPAL 204
+ L +IS LNP + + + F + HR G+++ +LEP+ + D L
Sbjct: 77 IQSRLTAG----QISSLNPSKLWARVMGDDFVIFDGVFHRNSDGLLVCELEPAYTSD-NL 131
Query: 205 SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEV 264
G +A +A++RL+ ++ D +VE+V+++TG+DRVMLY F +++HG+V
Sbjct: 132 PFLGFYH---MANAALNRLRQ--QANLRDFYDVIVEEVRRMTGFDRVMLYRFDENNHGDV 186
Query: 265 VSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDCH--AIPVMVIQSKELKQPL 322
++E +R D+EPYLG+H+P +DIPQ AR LF N +R+I D + A+P+ + + +
Sbjct: 187 IAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPSTNRAV 246
Query: 323 CLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLR 382
L S LRS + CHL Y+ NMG ASL +++I KD LWGL+ CHH +P+ IPF LR
Sbjct: 247 DLTESILRSAYHCHLTYLKNMGVGASLTISLI---KDG-HLWGLIACHHQTPKVIPFELR 302
Query: 383 YACEF----LVQAFSLQLYME-LQVAMQLAEKNILRTQVLLCDMLLRDAPF--SIVTQSP 435
ACEF + S Q E +QLAE + +L D + A F +
Sbjct: 303 KACEFFGRVVFSNISAQEDTETFDYRVQLAEH-----EAVLLDKMTTAADFVEGLTNHPD 357
Query: 436 SIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNHGDCTGLSTDSLAEAGYPG 495
++ L GAA+ +G + LVG TP E ++ + WL N T SL++ YP
Sbjct: 358 RLLGLTGSQGAAICFGEKLILVGETPDEKAVQYLLQWLENREVQDV-FFTSSLSQI-YPD 415
Query: 496 AALLGQAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHH---PEHKDNGGKMHPRSSF 552
A G+ I +FL WFR + V WGG +H +D ++HPR SF
Sbjct: 416 AVNFKSVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQEDGKIELHPRQSF 475
Query: 553 KAFLEVVKNRSFPWEVSEINAIHSLQ 578
+ E+V+ +S PW+ EI + +L+
Sbjct: 476 DLWKEIVRLQSLPWQSVEIQSALALK 501
>sp|Q9R6X3|PHYB_NOSS1 Cyanobacterial phytochrome B OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=bphB PE=3 SV=1
Length = 751
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 303/611 (49%), Gaps = 54/611 (8%)
Query: 87 IQRGGLIQPFGCMLAVEEPTFRIIGYSENCLEMLDLRSRSEDFELNGLIGIDARTLFTPP 146
I GLIQP G +L ++E I+ S N +L R + LN + L
Sbjct: 22 IHIPGLIQPHGVLLVLQEVDLTILQVSNNTFNIL---GRHPEQLLNQHLS----CLLEAE 74
Query: 147 SGASLAKAAASREISLLNPI--LVHSNSRSIEKPFYAILHRIDVGIVIDLEPSKSGDPAL 204
+ L A ++ ++NP+ ++ S++ SI F I HR + ++++LE + S D
Sbjct: 75 QLSLLKDCLAQEDLQIINPLEFIIKSHNESIS--FDVIAHRSNNLLILELEANLS-DKTH 131
Query: 205 SLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEV 264
S KLA + +LQ + + ++V+K+TG+DRVM+Y F + +G+V
Sbjct: 132 SFFRFYHLVKLA---MLKLQG--TATTTEISQILAQEVRKITGFDRVMVYRFDEQWNGKV 186
Query: 265 VSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMICDC--HAIPVMVIQSKELKQPL 322
++E++ L YLG+++PA+DIPQ AR L+ QN +R+I D +P++ I + QPL
Sbjct: 187 IAEVKPEYLTSYLGLNYPASDIPQQARKLYSQNWLRLIPDAKYQPVPIVPINNPLNDQPL 246
Query: 323 CLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLR 382
L S LRS H++YM NMG AS+ ++++ N KLWGL+ CHH SP+YIP+ +R
Sbjct: 247 DLSRSVLRSVSPLHIEYMQNMGVTASMSISIMKNQ----KLWGLIACHHQSPKYIPYEIR 302
Query: 383 YACEFLVQAFSLQLYMELQVAMQLAEKNILRTQVLLCDMLLRDAPF--SIVTQSPSIMDL 440
ACEFL Q S+++ + + + L + + F +++ P+I+DL
Sbjct: 303 SACEFLGQMTSVEMSAKEDSEDTEDKIQVKSVHSKLVQYMSAENDFINALIDHQPNILDL 362
Query: 441 VKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNN-HGDCTGLSTDSLAEAGYPGAALL 499
VK GAA+ + G VG P ++ + W+ N H + +TDSLA YP A L
Sbjct: 363 VKAQGAAVCFNGNSCTVGQVPPMPDIQVLVEWMSQNIHEEI--FATDSLATV-YPDAEKL 419
Query: 500 GQAVCGMATARI--TSKDFLFWFRSHTAKEVKWGGAKHHP-EHKDNGG-KMHPRSSFKAF 555
G+ I + K+++ WFR + V WGG H P E NG ++ PR SF +
Sbjct: 420 RDVASGLIALSISRSQKNYILWFRPEVVRTVDWGGNPHKPVEVIANGEIRLSPRKSFDLW 479
Query: 556 LEVVKNRSFPWEVSEINAIHSLQ-----IVMRDSFQEMEEENDSKVQGNTQQNGSKMQGV 610
E V +S PW+ E+NA L+ IV++ + D Q N + S Q +
Sbjct: 480 KETVLLKSQPWKSHEVNAALELRSAIIGIVLQKA--------DELAQLNIELERSN-QEL 530
Query: 611 DELSSVAC----EMVRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDE 666
D + +A E +R I + F ++ G I K LT + ++ M + LID
Sbjct: 531 DAFAYIASHDLKEPLRGIHNYSN--FLMEDYGEIIDAPGKEKLLTLIRLTQRM-EDLIDS 587
Query: 667 VVHEESQGAVE 677
++H G V+
Sbjct: 588 LLHFSRLGRVD 598
>sp|Q9HWR3|BPHY_PSEAE Bacteriophytochrome OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=bphP PE=1 SV=1
Length = 728
Score = 176 bits (447), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 179/366 (48%), Gaps = 33/366 (9%)
Query: 230 DIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQA 289
D L V ++++++TGYDRVM Y F DD GEVV+E RR DLE YLG +PA+DIP
Sbjct: 139 DTASLLSNVTDELRRMTGYDRVMAYRFRHDDSGEVVAESRREDLESYLGQRYPASDIPAQ 198
Query: 290 ARFLFKQNRVRMICDCHAIPVMVIQS--KELKQPLCLVNSTLRSPHGCHLQYMTNMGSIA 347
AR L+ QN +R+I D P+ V + E + L S LRS H +Y+TNMG A
Sbjct: 199 ARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSYSVLRSVSPIHCEYLTNMGVRA 258
Query: 348 SLVMAVIINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFS--LQLYMELQVAMQ 405
S+ +++++ KLWGL CHH SP+ IP+P+R + + Q S ++ + ++A
Sbjct: 259 SMSISIVVGG----KLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVERLEQGRIAEL 314
Query: 406 LAEKNILRTQVLLCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQ 465
L R + D ++ I L+ CDGA + GGR + E Q
Sbjct: 315 LRVSTERRLALARRARDADDLFGALAHPDDGIAALIPCDGALVMLGGRTLSIR-GDFERQ 373
Query: 466 LKDIAWWLLNN------HGDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITSKD--FL 517
++ L + H D ++ + G CG+ R ++ ++
Sbjct: 374 AGNVLQRLQRDPERDIYHTDNWPQPSEDSPDGG---------DCCGVLAIRFHRQESGWI 424
Query: 518 FWFRSHTAKEVKWGGAKHHPEH----KDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINA 573
FWFR ++WGG PE +G ++ PR SF+A+ EVV+ S PW +++
Sbjct: 425 FWFRHEEVHRIRWGGK---PEKLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAI 481
Query: 574 IHSLQI 579
L++
Sbjct: 482 AEKLRL 487
>sp|Q9RZA4|BPHY_DEIRA Bacteriophytochrome OS=Deinococcus radiodurans (strain ATCC 13939 /
DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=bphP PE=1 SV=1
Length = 755
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 211/449 (46%), Gaps = 29/449 (6%)
Query: 183 LHRIDVGIVIDLEPSKSGDPALSLAGAVQSQKLAVSAISRLQALPGGDIGLLCDTVVEDV 242
+HR+ ++++ EP+++ D + A+++ A+ + L+AL + + V
Sbjct: 115 VHRVGELLILEFEPTEAWDS--TGPHALRNAMFALESAPNLRAL--------AEVATQTV 164
Query: 243 QKLTGYDRVMLYNFHDDDHGEVVSEIRRSDLEPYLGIHFPANDIPQAARFLFKQNRVRMI 302
++LTG+DRVMLY F D GEV++E RR L +LG FPA+DIP AR L+ ++ +R+
Sbjct: 165 RELTGFDRVMLYKFAPDATGEVIAEARREGLHAFLGHRFPASDIPAQARALYTRHLLRLT 224
Query: 303 CDCH--AIPVMVIQSKELKQPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAVIINSKDS 360
D A+P+ + + + P L + LR+ H+QY+ NM + ++ ++
Sbjct: 225 ADTRAAAVPLDPVLNPQTNAPTPLGGAVLRATSPMHMQYLRNM----GVGSSLSVSVVVG 280
Query: 361 MKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILR---TQVL 417
+LWGL+ CHH +P +P LR E+L + SLQ+ ++ + A A + LR +V
Sbjct: 281 GQLWGLIACHHQTPYVLPPDLRTTLEYLGRLLSLQVQVK-EAADVAAFRQSLREHHARVA 339
Query: 418 LCDMLLRDAPFSIVTQSPSIMDLVKCDGAALYYGGRCWLVGVTPTESQLKDIAWWLLNNH 477
L ++ + ++ L++ G L + GR +G P + + WL
Sbjct: 340 LAAAHSLSPHDTLSDPALDLLGLMRAGGLILRFEGRWQTLGEVPPAPAVDALLAWLETQP 399
Query: 478 GDCTGLSTDSLAEAGYPGAALLGQAVCGMATARITS--KDFLFWFRSHTAKEVKWGGAKH 535
G + TD+L + +P A L + G+ + + L W R EV WGGA
Sbjct: 400 GAL--VQTDALGQL-WPAGADLAPSAAGLLAISVGEGWSECLVWLRPELRLEVAWGGATP 456
Query: 536 HPEHKDNGGKMHPRSSFKAFLEVVKNRSFPWEVSEINAIHSLQIVMRDSFQEMEEENDSK 595
+ KD+ G PR SF +LE + + PW EI L+ + + E
Sbjct: 457 D-QAKDDLG---PRHSFDTYLEEKRGYAEPWHPGEIEEAQDLRDTLTGALGERLSVIRDL 512
Query: 596 VQGNTQQNGSKMQGVDELSSVACEMVRLI 624
+ TQ N Q +S E VRLI
Sbjct: 513 NRALTQSNAEWRQYGFVISHHMQEPVRLI 541
>sp|Q55434|PHY2_SYNY3 Phytochrome-like protein cph2 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=cph2 PE=1 SV=1
Length = 1276
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 238 VVEDVQKLTGYDRVMLYNFHDDDHGEVVSE-IRRSDLEPYLGIHFPANDIPQAARFLFKQ 296
+VE+ + G DRV +Y F D GEV++E + R+ L LG+HFP DIP AR
Sbjct: 31 IVEEARIFLGVDRVKIYKFASDGSGEVLAEAVNRAALPSLLGLHFPVEDIPPQAREELGN 90
Query: 297 NRVRMICDCHAIPVMVIQSKELK---QPLCLVNSTLRSPHGCHLQYMTNMGSIASLVMAV 353
R + D + +S EL P N + CH+QY+ MG ++SL + V
Sbjct: 91 QRKMIAVD---VAHRRKKSHELSGRISPTEHSNGHYTTVDSCHIQYLLAMGVLSSLTVPV 147
Query: 354 IINSKDSMKLWGLVVCHHTSPRYIPFPLRYACEFLVQAFSLQLYMELQVAMQLAEKNILR 413
+ +LWG++ HH+ PR L + SL + + Q++ Q+ ++ +
Sbjct: 148 M----QDQQLWGIMAVHHSKPRRFTEQEWETMALLSKEVSLAI-TQSQLSRQVHQQQVQE 202
Query: 414 TQVLLCDMLLR---DAPFSIVTQSPSIMDLVKCDGAALY 449
V + + D P + ++ V+ DGA LY
Sbjct: 203 ALVQRLETTVAQYGDRPETWQYALETVGQAVEADGAVLY 241
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 52/222 (23%)
Query: 213 QKLAVSAISRLQALPGGDIGLLCDTVVEDVQKLTGYDRVMLYNFHDDDHGEVVSEIRRSD 272
+KL + ++++A +I + + V +V++ DRV+L+ F+ G+VV+E
Sbjct: 924 EKLVLKIANKIRA--SLNINDILYSTVTEVRQFLNTDRVVLFKFNSQWSGQVVTESHNDF 981
Query: 273 LEPYLGIHFPANDIPQAARFLFKQNRVRMICDCHAIPVMVIQSKELKQPLCLVNSTLRSP 332
+ L+++ RVR + D I+ +L
Sbjct: 982 CRSIINDEIDDPCFKGHYLRLYREGRVRAVSD--------IEKADLAD------------ 1021
Query: 333 HGCHLQYMTNMGSIASLVMAVIINSKDSMKLWGLVVCHH-TSPRYIPFPLRYACEFLVQA 391
CH + + + A+LV+ V+ N LWGL++ H +PRY Q
Sbjct: 1022 --CHKELLRHYQVKANLVVPVVFNE----NLWGLLIAHECKTPRYW------------QE 1063
Query: 392 FSLQLYMEL--QVAM---------QLAEKNILRTQVLLCDML 422
LQL MEL QVA+ QL NI Q+ D L
Sbjct: 1064 EDLQLLMELATQVAIAIHQGELYEQLETANIRLQQISSLDAL 1105
>sp|Q06067|ATOS_ECOLI Signal transduction histidine-protein kinase AtoS OS=Escherichia
coli (strain K12) GN=atoS PE=3 SV=1
Length = 608
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 765 IFASDENACCSEWNAAMEKVTGWMRHEVIGKMLPREIFGNFCRMKGQDMLTKFMILLYQG 824
+ A D + N A E +TG+ RHE++G+ +F N T+F +
Sbjct: 275 VIAIDRQGDVTTMNPAAEVITGYQRHELVGQPYSM-LFDN----------TQFYSPVLDT 323
Query: 825 ITGQGTENFPFGF-FNRQGQFVEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQ- 882
+ GTE+ F + + +E+++T SR + G++IG ++ DL E Q
Sbjct: 324 LE-HGTEHVALEISFPGRDRTIELSVTTSRIHNTHGEMIGAL----VIFSDLTARKETQR 378
Query: 883 GLEDMDIYAKIKEL-AYIRQEVKNPLNGIRFVHKLLESSSISENQRQYL 930
+ + A + EL A + EV+NPL IR ++L + ++YL
Sbjct: 379 RMAQAERLATLGELMAGVAHEVRNPLTAIRGYVQILRQQTSDPIHQEYL 427
>sp|Q9C5U0|AHK4_ARATH Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 PE=1 SV=1
Length = 1080
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 891 AKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDG-MDL 949
AK + LA + E++ P+NGI + +L + +S QR Y +T+ C + ++ +I+ +D
Sbjct: 472 AKSQFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLDR 531
Query: 950 RCIEEGR 956
IE G+
Sbjct: 532 AKIEAGK 538
>sp|Q54U87|DHKA_DICDI Hybrid signal transduction histidine kinase A OS=Dictyostelium
discoideum GN=dhkA PE=1 SV=1
Length = 2150
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 879 LEAQGLEDMDIYAKIKELAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACER 938
LE + E+ + AK +A + EV+ PL+G+ V LL +++SE QR Y++T +
Sbjct: 1375 LEKEAAEEAN-KAKSAFVATVSHEVRTPLSGVIGVSDLLLETNLSEEQRDYVQTIQKSSQ 1433
Query: 939 QIMTIIDGM 947
++TII+ +
Sbjct: 1434 ALLTIINDI 1442
>sp|Q9P896|TCSA_EMENI Two-component system protein A OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tcsA
PE=3 SV=2
Length = 682
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 76/205 (37%), Gaps = 36/205 (17%)
Query: 738 KVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNAAMEKVTGWMRHEVIGKML 797
+V+ ++ + Y+ ++ +V IF D + WNA + G+ E+IGK
Sbjct: 157 EVINNQHAYMNETYKILVDTVKDY--AIFMLDPTGHIATWNAGAGVLKGYKAEEIIGKHF 214
Query: 798 PREIFGNFCRMKGQDMLTKFMILLYQGITGQGTEN-------------FPFGFFNRQGQF 844
++ R G+ + L I +G P F + F
Sbjct: 215 -SILYSPADRDNGKPARALDVCLREGRIEDEGWRYRRDGSRFWANVLITPIYQFGQHVGF 273
Query: 845 VEVALTASRRTDAEGKVIGCFCFMQILVPDLQPALEAQGLEDMDIYAKIKELAYIRQEVK 904
V+V + R +AE +I F L D LA I E++
Sbjct: 274 VKVTRDLTERKEAEACMIAAFEESSRLKTDF--------------------LANISHEIR 313
Query: 905 NPLNGIRFVHKLLESSSISENQRQY 929
P+NG++ +L + +SE QR++
Sbjct: 314 TPMNGMQIALTMLTDTGLSEEQREH 338
>sp|P48027|GACS_PSESY Sensor protein GacS OS=Pseudomonas syringae pv. syringae GN=gacS
PE=3 SV=1
Length = 907
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 896 LAYIRQEVKNPLNGIRFVHKLLESSSISENQRQYLETSDACERQIMTIIDG-MDLRCIEE 954
LA + E++ PLNGI LL+ S ++ Q YL T + +++II+ +D IE
Sbjct: 279 LANMSHEIRTPLNGILGFTHLLQKSELTPRQFDYLGTIEKSADNLLSIINEILDFSKIEA 338
Query: 955 GRCVF 959
G+ V
Sbjct: 339 GKLVL 343
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 349,749,681
Number of Sequences: 539616
Number of extensions: 14731906
Number of successful extensions: 34756
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 34347
Number of HSP's gapped (non-prelim): 90
length of query: 959
length of database: 191,569,459
effective HSP length: 127
effective length of query: 832
effective length of database: 123,038,227
effective search space: 102367804864
effective search space used: 102367804864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)