Query 002155
Match_columns 959
No_of_seqs 801 out of 6606
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 14:41:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002155.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002155hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.1E-70 7.2E-75 673.2 35.0 581 2-589 84-757 (768)
2 3rgz_A Protein brassinosteroid 100.0 6.4E-66 2.2E-70 633.4 35.5 564 1-570 56-716 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 3.7E-61 1.3E-65 586.3 42.1 566 2-575 11-626 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 3.2E-57 1.1E-61 551.6 42.5 539 1-553 31-627 (680)
5 3t6q_A CD180 antigen; protein- 100.0 8.3E-57 2.8E-61 540.5 37.7 528 25-574 18-563 (606)
6 3vq2_A TLR4, TOLL-like recepto 100.0 1.2E-55 4E-60 530.5 33.6 528 23-576 15-563 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 9.5E-55 3.3E-59 539.7 41.9 518 29-576 14-565 (844)
8 3t6q_A CD180 antigen; protein- 100.0 2E-55 6.9E-60 528.5 32.7 529 2-553 19-565 (606)
9 3vq2_A TLR4, TOLL-like recepto 100.0 4.1E-54 1.4E-58 517.1 30.1 525 2-554 18-564 (606)
10 3j0a_A TOLL-like receptor 5; m 100.0 9.4E-53 3.2E-57 521.9 38.7 521 2-554 11-566 (844)
11 2z63_A TOLL-like receptor 4, v 100.0 2.2E-50 7.4E-55 481.4 32.4 511 46-574 11-534 (570)
12 4asz_A BDNF/NT-3 growth factor 100.0 2.7E-52 9.3E-57 446.7 11.5 259 679-957 13-288 (299)
13 4aoj_A High affinity nerve gro 100.0 1.5E-51 5.3E-56 447.2 15.1 259 679-957 41-318 (329)
14 2z63_A TOLL-like receptor 4, v 100.0 7.5E-50 2.6E-54 476.7 30.9 505 27-556 15-539 (570)
15 4gt4_A Tyrosine-protein kinase 100.0 2.6E-51 8.9E-56 441.1 13.0 257 680-956 27-304 (308)
16 2z81_A CD282 antigen, TOLL-lik 100.0 1.7E-49 5.9E-54 471.1 28.8 478 27-573 13-512 (549)
17 3omv_A RAF proto-oncogene seri 100.0 1.5E-50 5.2E-55 432.7 17.3 258 679-957 36-299 (307)
18 4fih_A Serine/threonine-protei 100.0 1.9E-50 6.6E-55 436.9 17.4 250 679-952 74-324 (346)
19 4b9d_A Serine/threonine-protei 100.0 2.3E-50 8E-55 437.0 15.0 251 679-952 24-277 (350)
20 4g3f_A NF-kappa-beta-inducing 100.0 6.7E-50 2.3E-54 431.6 15.1 251 679-956 58-314 (336)
21 4fie_A Serine/threonine-protei 100.0 2.6E-49 9E-54 438.7 18.9 250 679-952 151-401 (423)
22 4eco_A Uncharacterized protein 100.0 3E-49 1E-53 474.0 20.4 462 43-552 82-604 (636)
23 2z81_A CD282 antigen, TOLL-lik 100.0 9.7E-49 3.3E-53 464.6 23.1 454 47-571 10-486 (549)
24 3fpq_A Serine/threonine-protei 100.0 1.1E-48 3.8E-53 415.3 20.8 245 682-952 29-283 (290)
25 4aw0_A HPDK1, 3-phosphoinositi 100.0 9.2E-50 3.1E-54 425.0 12.3 247 679-950 32-283 (311)
26 3hmm_A TGF-beta receptor type- 100.0 3.1E-49 1.1E-53 426.6 15.6 269 679-958 3-297 (303)
27 3hyh_A Carbon catabolite-derep 100.0 7.7E-49 2.6E-53 412.5 16.5 246 679-952 13-263 (275)
28 4ecn_A Leucine-rich repeat pro 100.0 1.1E-47 3.8E-52 466.5 25.5 218 42-270 323-608 (876)
29 4eco_A Uncharacterized protein 100.0 3.8E-48 1.3E-52 464.4 20.5 454 66-573 81-602 (636)
30 4ase_A Vascular endothelial gr 100.0 1.3E-48 4.5E-53 427.5 14.1 261 678-957 63-346 (353)
31 4g8a_A TOLL-like receptor 4; l 100.0 2.7E-46 9.4E-51 452.3 35.3 521 32-574 44-583 (635)
32 2z7x_B TOLL-like receptor 1, v 100.0 8.4E-48 2.9E-52 453.1 21.0 456 45-574 3-484 (520)
33 3ubd_A Ribosomal protein S6 ki 100.0 1.1E-48 3.6E-53 417.2 9.7 248 679-952 24-282 (304)
34 2z7x_B TOLL-like receptor 1, v 100.0 5.2E-47 1.8E-51 446.3 24.8 434 69-571 3-457 (520)
35 4ecn_A Leucine-rich repeat pro 100.0 7.5E-46 2.6E-50 450.5 28.8 458 66-572 323-865 (876)
36 4g31_A Eukaryotic translation 100.0 2.7E-47 9.3E-52 408.9 12.3 251 679-952 5-280 (299)
37 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-44 5.3E-49 436.9 29.9 523 4-552 40-584 (635)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7.8E-45 2.7E-49 431.3 26.7 457 43-574 32-513 (562)
39 4b99_A Mitogen-activated prote 100.0 3.1E-44 1.1E-48 400.1 19.1 263 678-952 53-345 (398)
40 2qkw_B Protein kinase; three-h 100.0 8.2E-44 2.8E-48 391.3 20.2 281 673-957 33-314 (321)
41 4f9c_A Cell division cycle 7-r 100.0 1.8E-44 6.1E-49 397.9 14.7 199 677-887 19-251 (361)
42 3uim_A Brassinosteroid insensi 100.0 8.3E-44 2.8E-48 392.3 18.6 291 666-956 17-309 (326)
43 3v5w_A G-protein coupled recep 100.0 1.6E-43 5.5E-48 409.1 18.8 250 678-952 188-450 (689)
44 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7.1E-43 2.4E-47 414.4 24.1 458 23-553 35-515 (562)
45 3uto_A Twitchin; kinase, muscl 100.0 2.3E-43 7.9E-48 413.1 16.0 253 678-952 156-411 (573)
46 3v47_A TOLL-like receptor 5B a 100.0 8.9E-41 3E-45 386.4 27.8 378 47-454 15-412 (455)
47 3s95_A LIMK-1, LIM domain kina 100.0 5.9E-41 2E-45 366.6 22.8 260 678-958 9-282 (310)
48 3fxz_A Serine/threonine-protei 100.0 3.5E-41 1.2E-45 365.3 20.2 251 678-952 19-270 (297)
49 1jl5_A Outer protein YOPM; leu 100.0 1.6E-40 5.3E-45 380.7 24.9 419 40-572 9-430 (454)
50 3v47_A TOLL-like receptor 5B a 100.0 3.8E-40 1.3E-44 381.0 26.4 358 138-573 31-410 (455)
51 1jl5_A Outer protein YOPM; leu 100.0 1.2E-40 4.2E-45 381.5 21.9 400 64-572 9-410 (454)
52 2nru_A Interleukin-1 receptor- 100.0 6.2E-40 2.1E-44 358.1 26.5 283 665-958 11-306 (307)
53 3soc_A Activin receptor type-2 100.0 4.3E-41 1.5E-45 369.4 16.6 267 678-958 23-318 (322)
54 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.4E-41 2.9E-45 357.3 17.5 257 678-958 7-264 (268)
55 2psq_A Fibroblast growth facto 100.0 5.8E-41 2E-45 375.0 16.8 260 678-957 80-363 (370)
56 4hcu_A Tyrosine-protein kinase 100.0 2.3E-41 7.9E-46 361.8 12.4 257 678-958 9-266 (269)
57 3p86_A Serine/threonine-protei 100.0 1.8E-40 6.1E-45 361.6 19.6 258 678-957 36-297 (309)
58 3zgw_A Maternal embryonic leuc 100.0 1.4E-40 4.7E-45 366.7 18.0 251 677-952 8-261 (347)
59 3fe3_A MAP/microtubule affinit 100.0 1.3E-40 4.4E-45 365.1 17.7 248 678-952 14-265 (328)
60 2c30_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44 362.0 20.7 261 668-952 24-295 (321)
61 4eqm_A Protein kinase; transfe 100.0 7.2E-41 2.5E-45 362.5 14.3 260 678-957 10-274 (294)
62 3ugc_A Tyrosine-protein kinase 100.0 1.1E-40 3.8E-45 361.7 15.0 266 678-958 9-291 (295)
63 3kul_A Ephrin type-A receptor 100.0 7.2E-41 2.5E-45 367.7 12.8 257 678-957 48-312 (325)
64 3cbl_A C-FES, proto-oncogene t 100.0 3.6E-41 1.2E-45 378.1 10.6 258 678-958 113-374 (377)
65 1o6l_A RAC-beta serine/threoni 100.0 5.6E-40 1.9E-44 360.9 19.7 249 678-952 4-261 (337)
66 4euu_A Serine/threonine-protei 100.0 1.2E-39 4E-44 357.8 22.2 273 678-956 8-307 (319)
67 3gen_A Tyrosine-protein kinase 100.0 8.4E-41 2.9E-45 360.4 11.8 256 678-957 23-279 (283)
68 2qol_A Ephrin receptor; recept 100.0 1.2E-40 4E-45 372.7 12.8 257 678-957 44-308 (373)
69 2yab_A Death-associated protei 100.0 8.8E-40 3E-44 362.7 19.0 252 678-952 11-273 (361)
70 4dc2_A Protein kinase C IOTA t 100.0 5.8E-40 2E-44 367.1 16.6 256 678-951 51-318 (396)
71 3niz_A Rhodanese family protei 100.0 5.8E-40 2E-44 358.3 16.0 263 678-952 20-301 (311)
72 3c0i_A Peripheral plasma membr 100.0 3.9E-40 1.3E-44 365.9 14.7 256 678-952 23-287 (351)
73 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.5E-40 2.6E-44 359.4 15.7 246 679-952 9-259 (336)
74 3lb7_A RAF proto-oncogene seri 100.0 1.2E-39 4E-44 355.0 16.9 260 678-958 35-300 (307)
75 3soa_A Calcium/calmodulin-depe 100.0 1.7E-39 5.9E-44 369.8 18.9 254 677-952 9-268 (444)
76 3q4u_A Activin receptor type-1 100.0 9.7E-40 3.3E-44 355.6 16.1 264 678-957 7-301 (301)
77 3l9p_A Anaplastic lymphoma kin 100.0 2.8E-40 9.5E-45 369.2 11.7 261 678-958 70-345 (367)
78 1qcf_A Haematopoetic cell kina 100.0 2.2E-40 7.5E-45 381.0 11.2 256 678-957 187-443 (454)
79 1mp8_A Focal adhesion kinase 1 100.0 3.3E-40 1.1E-44 355.2 11.8 256 678-957 14-275 (281)
80 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.5E-40 1.9E-44 363.4 13.9 248 678-951 22-280 (353)
81 3t9t_A Tyrosine-protein kinase 100.0 3.2E-40 1.1E-44 352.6 11.6 256 679-958 8-264 (267)
82 3v8s_A RHO-associated protein 100.0 5.2E-40 1.8E-44 369.7 13.2 257 674-952 64-330 (410)
83 1luf_A Muscle-specific tyrosin 100.0 5E-40 1.7E-44 365.0 12.8 262 677-958 45-335 (343)
84 1tki_A Titin; serine kinase, m 100.0 1.6E-39 5.4E-44 356.0 16.5 252 678-952 4-258 (321)
85 1ob3_A PFPK5, cell division co 100.0 1.6E-39 5.5E-44 351.1 16.4 262 679-952 2-281 (288)
86 3a8x_A Protein kinase C IOTA t 100.0 2.7E-39 9.3E-44 357.2 18.6 256 679-952 9-276 (345)
87 4fr4_A YANK1, serine/threonine 100.0 2.9E-39 9.8E-44 360.3 18.8 249 679-951 15-271 (384)
88 2ivs_A Proto-oncogene tyrosine 100.0 7.6E-40 2.6E-44 358.7 13.6 261 678-958 22-311 (314)
89 2y0a_A Death-associated protei 100.0 2.9E-39 9.9E-44 355.1 18.0 252 678-952 10-272 (326)
90 2bdw_A Hypothetical protein K1 100.0 1.5E-39 5.3E-44 362.0 16.0 252 678-952 28-285 (362)
91 4aw2_A Serine/threonine-protei 100.0 4.7E-40 1.6E-44 372.9 12.0 261 673-952 68-339 (437)
92 1fot_A TPK1 delta, CAMP-depend 100.0 3.8E-39 1.3E-43 351.8 18.6 246 678-952 5-259 (318)
93 1opk_A P150, C-ABL, proto-onco 100.0 4.2E-40 1.5E-44 382.1 11.7 257 678-957 219-477 (495)
94 3tt0_A Basic fibroblast growth 100.0 9.9E-40 3.4E-44 367.3 14.3 260 678-957 68-351 (382)
95 1k9a_A Carboxyl-terminal SRC k 100.0 1.6E-39 5.4E-44 373.1 16.0 252 678-958 192-445 (450)
96 1xjd_A Protein kinase C, theta 100.0 1.1E-39 3.6E-44 359.7 13.6 249 677-951 15-269 (345)
97 1kob_A Twitchin; kinase, intra 100.0 4.8E-39 1.6E-43 360.0 18.9 253 678-952 50-305 (387)
98 3vhe_A Vascular endothelial gr 100.0 1.3E-39 4.5E-44 364.0 14.2 263 676-957 19-354 (359)
99 3o0g_A Cell division protein k 100.0 3.1E-39 1.1E-43 349.7 16.5 263 679-952 2-283 (292)
100 3tki_A Serine/threonine-protei 100.0 6.3E-40 2.2E-44 359.7 11.2 253 678-952 6-262 (323)
101 2vd5_A DMPK protein; serine/th 100.0 3.6E-40 1.2E-44 371.2 9.3 261 672-952 54-328 (412)
102 4f0f_A Serine/threonine-protei 100.0 1.2E-38 4E-43 344.4 20.4 253 678-956 18-287 (287)
103 3dtc_A Mitogen-activated prote 100.0 9.6E-40 3.3E-44 349.7 11.8 250 679-956 7-271 (271)
104 2izr_A Casein kinase I isoform 100.0 2.9E-39 1E-43 356.3 16.0 260 678-957 8-280 (330)
105 3qup_A Tyrosine-protein kinase 100.0 1.5E-39 5.2E-44 357.8 13.6 260 678-957 22-297 (323)
106 1csn_A Casein kinase-1; phosph 100.0 6.1E-39 2.1E-43 348.7 18.0 261 678-957 9-282 (298)
107 2pmi_A Negative RE, cyclin-dep 100.0 5.6E-39 1.9E-43 351.7 17.5 266 678-952 4-294 (317)
108 3poz_A Epidermal growth factor 100.0 9.9E-40 3.4E-44 359.3 11.6 256 678-957 14-277 (327)
109 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.3E-40 2.5E-44 376.2 10.8 256 678-957 183-439 (452)
110 2zv2_A Calcium/calmodulin-depe 100.0 5.3E-39 1.8E-43 349.0 16.6 250 678-952 12-293 (298)
111 2i0e_A Protein kinase C-beta I 100.0 4.2E-39 1.4E-43 356.1 16.1 250 677-952 18-277 (353)
112 3kn6_A Ribosomal protein S6 ki 100.0 2.7E-39 9.1E-44 355.1 14.3 251 684-952 16-271 (325)
113 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.7E-39 2.3E-43 354.6 17.6 245 679-952 41-294 (350)
114 3uc3_A Serine/threonine-protei 100.0 4.2E-39 1.4E-43 358.6 16.0 253 678-952 19-275 (361)
115 3mdy_A Bone morphogenetic prot 100.0 3.5E-38 1.2E-42 349.3 23.3 263 677-958 35-331 (337)
116 3og7_A AKAP9-BRAF fusion prote 100.0 3E-39 1E-43 349.1 14.2 261 678-959 23-289 (289)
117 4fvq_A Tyrosine-protein kinase 100.0 4.1E-39 1.4E-43 348.4 15.3 251 678-957 7-274 (289)
118 3kfa_A Tyrosine-protein kinase 100.0 1.1E-39 3.6E-44 352.8 10.6 259 677-958 11-271 (288)
119 2buj_A Serine/threonine-protei 100.0 5.1E-39 1.7E-43 352.6 16.2 262 678-957 28-305 (317)
120 3cc6_A Protein tyrosine kinase 100.0 2.2E-39 7.6E-44 348.8 12.9 256 678-957 11-272 (281)
121 2w4o_A Calcium/calmodulin-depe 100.0 4.6E-39 1.6E-43 356.7 15.8 252 677-952 51-306 (349)
122 4e5w_A Tyrosine-protein kinase 100.0 3.9E-39 1.3E-43 350.9 14.9 264 679-957 21-301 (302)
123 2wqm_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 347.6 19.6 263 678-958 31-297 (310)
124 2h34_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42 343.8 22.7 258 678-957 33-295 (309)
125 1o6v_A Internalin A; bacterial 100.0 2.1E-37 7.3E-42 358.3 30.0 360 28-456 34-394 (466)
126 3kmu_A ILK, integrin-linked ki 100.0 3.6E-39 1.2E-43 345.3 14.1 253 679-959 10-271 (271)
127 1rjb_A FL cytokine receptor; k 100.0 2.3E-39 7.8E-44 359.7 12.9 262 678-958 44-334 (344)
128 2x4f_A Myosin light chain kina 100.0 1E-38 3.5E-43 356.6 18.2 247 684-952 94-343 (373)
129 3lxl_A Tyrosine-protein kinase 100.0 3E-39 1E-43 355.9 13.7 266 678-958 22-303 (327)
130 3bz5_A Internalin-J, INLJ; leu 100.0 6.3E-38 2.2E-42 359.3 25.1 235 12-271 12-247 (457)
131 3qd2_B Eukaryotic translation 100.0 3.5E-39 1.2E-43 356.5 14.1 252 678-952 5-326 (332)
132 4eut_A Serine/threonine-protei 100.0 5.8E-39 2E-43 362.7 16.1 271 678-957 8-308 (396)
133 3a62_A Ribosomal protein S6 ki 100.0 7.8E-39 2.7E-43 351.8 16.3 249 678-952 16-277 (327)
134 3op5_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 360.6 13.8 267 677-957 33-328 (364)
135 3gni_B Strad alpha; kinase fol 100.0 1.4E-38 4.9E-43 359.3 18.5 267 678-952 24-334 (389)
136 2eva_A TAK1 kinase - TAB1 chim 100.0 1.9E-38 6.4E-43 345.8 18.7 254 679-957 8-262 (307)
137 3g2f_A Bone morphogenetic prot 100.0 8E-39 2.7E-43 354.2 15.8 266 678-957 12-317 (336)
138 1t46_A HOMO sapiens V-KIT hard 100.0 3.7E-39 1.3E-43 353.1 12.9 261 678-957 22-306 (313)
139 3is5_A Calcium-dependent prote 100.0 1.1E-38 3.7E-43 343.9 16.2 254 678-952 21-279 (285)
140 1qpc_A LCK kinase; alpha beta 100.0 2.8E-39 9.7E-44 347.6 11.6 256 678-957 12-268 (279)
141 2pvf_A Fibroblast growth facto 100.0 4.4E-39 1.5E-43 355.6 13.4 260 678-957 34-317 (334)
142 2id5_A Lingo-1, leucine rich r 100.0 7.8E-38 2.7E-42 363.7 24.4 347 165-576 15-361 (477)
143 3cok_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 340.7 17.9 250 678-952 10-263 (278)
144 3c4z_A Rhodopsin kinase; Ser/T 100.0 9.1E-39 3.1E-43 369.8 16.0 256 678-951 184-448 (543)
145 2acx_A G protein-coupled recep 100.0 6.5E-39 2.2E-43 371.4 14.8 254 678-952 183-445 (576)
146 3f3z_A Calcium/calmodulin-depe 100.0 3.2E-38 1.1E-42 339.0 19.0 251 678-952 8-262 (277)
147 3hko_A Calcium/calmodulin-depe 100.0 1.9E-38 6.3E-43 352.6 17.7 261 675-952 22-331 (345)
148 3lxp_A Non-receptor tyrosine-p 100.0 1.2E-39 3.9E-44 357.4 7.8 261 681-958 33-310 (318)
149 3p1a_A MYT1 kinase, membrane-a 100.0 2.5E-38 8.6E-43 345.5 18.2 245 679-952 57-305 (311)
150 3ork_A Serine/threonine protei 100.0 5.7E-39 1.9E-43 350.9 12.8 257 678-955 11-278 (311)
151 1nxk_A MAP kinase-activated pr 100.0 2.2E-38 7.4E-43 357.5 17.9 252 679-952 61-322 (400)
152 2y94_A 5'-AMP-activated protei 100.0 1.8E-38 6.1E-43 363.6 17.4 247 679-952 16-267 (476)
153 2r5t_A Serine/threonine-protei 100.0 1.2E-38 4.2E-43 354.8 15.7 245 678-948 37-286 (373)
154 2a2a_A Death-associated protei 100.0 2.8E-38 9.6E-43 347.0 18.2 252 678-952 11-273 (321)
155 3kk8_A Calcium/calmodulin depe 100.0 6.4E-38 2.2E-42 338.1 20.7 252 678-952 5-262 (284)
156 2eue_A Carbon catabolite derep 100.0 1.5E-38 5.2E-43 341.1 15.7 246 679-952 13-263 (275)
157 2w1i_A JAK2; chromosomal rearr 100.0 7.9E-39 2.7E-43 352.2 13.8 266 678-958 40-322 (326)
158 4hgt_A Casein kinase I isoform 100.0 3E-38 1E-42 342.9 18.1 262 677-957 7-279 (296)
159 3kex_A Receptor tyrosine-prote 100.0 2.5E-39 8.6E-44 355.9 9.5 255 679-957 13-275 (325)
160 1u59_A Tyrosine-protein kinase 100.0 5.5E-39 1.9E-43 346.8 11.9 256 679-958 9-272 (287)
161 3uzp_A CKI-delta, CKID, casein 100.0 3.2E-38 1.1E-42 342.6 18.0 261 678-957 8-279 (296)
162 3g33_A Cell division protein k 100.0 1.2E-38 4E-43 348.1 14.6 264 677-952 7-297 (308)
163 3fdn_A Serine/threonine-protei 100.0 2.6E-38 8.9E-43 340.1 16.9 248 677-952 7-258 (279)
164 1mqb_A Ephrin type-A receptor 100.0 9.9E-39 3.4E-43 352.1 13.9 256 679-957 44-308 (333)
165 3dls_A PAS domain-containing s 100.0 4.7E-39 1.6E-43 354.5 11.2 243 677-952 22-275 (335)
166 3c1x_A Hepatocyte growth facto 100.0 5.5E-39 1.9E-43 358.6 11.6 256 679-957 89-354 (373)
167 3f66_A Hepatocyte growth facto 100.0 3.8E-38 1.3E-42 342.4 18.0 258 678-958 24-291 (298)
168 2qr7_A Ribosomal protein S6 ki 100.0 5.9E-39 2E-43 354.1 11.6 252 678-952 21-278 (342)
169 3dbq_A Dual specificity protei 100.0 4.8E-39 1.6E-43 356.4 11.0 251 678-952 8-274 (343)
170 1o6v_A Internalin A; bacterial 100.0 5.5E-37 1.9E-41 354.8 28.7 344 139-551 48-391 (466)
171 2v62_A Serine/threonine-protei 100.0 5.6E-39 1.9E-43 356.2 11.3 266 678-958 36-328 (345)
172 3lzb_A Epidermal growth factor 100.0 7.3E-39 2.5E-43 352.1 12.0 256 678-957 14-277 (327)
173 1vzo_A Ribosomal protein S6 ki 100.0 7.5E-39 2.6E-43 356.1 12.1 255 678-953 53-323 (355)
174 2h8h_A Proto-oncogene tyrosine 100.0 2.8E-39 9.7E-44 378.6 8.9 256 678-957 266-522 (535)
175 3brb_A Proto-oncogene tyrosine 100.0 1.6E-38 5.5E-43 347.9 14.3 261 677-957 32-307 (313)
176 3gxj_A TGF-beta receptor type- 100.0 1.1E-39 3.8E-44 355.5 4.9 265 678-958 2-297 (303)
177 2ac3_A MAP kinase-interacting 100.0 2.6E-38 8.8E-43 346.8 15.7 261 679-952 12-296 (316)
178 2zmd_A Dual specificity protei 100.0 4.9E-38 1.7E-42 353.6 18.3 251 678-952 55-321 (390)
179 4ejn_A RAC-alpha serine/threon 100.0 1.1E-38 3.7E-43 366.5 13.2 249 678-952 147-405 (446)
180 3oz6_A Mitogen-activated prote 100.0 5.2E-38 1.8E-42 354.4 18.3 263 677-952 7-329 (388)
181 1fvr_A Tyrosine-protein kinase 100.0 6.7E-39 2.3E-43 353.1 10.8 258 679-958 25-300 (327)
182 1b6c_B TGF-B superfamily recep 100.0 1.5E-37 5E-42 345.0 21.5 267 676-958 39-336 (342)
183 2jam_A Calcium/calmodulin-depe 100.0 4.1E-38 1.4E-42 343.0 16.7 251 678-952 8-262 (304)
184 1byg_A CSK, protein (C-termina 100.0 1E-38 3.5E-43 343.1 11.6 251 678-957 20-272 (278)
185 4agu_A Cyclin-dependent kinase 100.0 1.1E-38 3.7E-43 349.0 12.0 262 679-952 3-285 (311)
186 3pls_A Macrophage-stimulating 100.0 3E-38 1E-42 343.3 15.3 256 680-957 22-286 (298)
187 1p4o_A Insulin-like growth fac 100.0 1.6E-38 5.4E-43 349.5 13.0 261 677-957 23-298 (322)
188 3ttj_A Mitogen-activated prote 100.0 3.9E-38 1.3E-42 361.8 16.8 259 678-952 61-356 (464)
189 1u5q_A Serine/threonine protei 100.0 4E-38 1.4E-42 348.5 16.1 247 678-952 53-306 (348)
190 2xir_A Vascular endothelial gr 100.0 2.2E-38 7.4E-43 347.5 13.6 262 677-957 25-309 (316)
191 2a19_B Interferon-induced, dou 100.0 5.1E-38 1.7E-42 338.8 16.1 249 677-958 9-274 (284)
192 2w5a_A Serine/threonine-protei 100.0 4.3E-39 1.5E-43 346.3 7.2 257 678-955 5-271 (279)
193 3bhy_A Death-associated protei 100.0 1E-37 3.4E-42 336.4 17.8 255 679-956 5-272 (283)
194 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.9E-38 1E-42 347.9 13.9 263 677-952 32-319 (329)
195 2yex_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 338.9 13.7 253 678-952 6-262 (276)
196 1ua2_A CAK, cell division prot 100.0 4.7E-38 1.6E-42 348.9 15.5 264 677-952 8-292 (346)
197 3llt_A Serine/threonine kinase 100.0 3.1E-38 1.1E-42 352.8 14.1 199 677-886 33-262 (360)
198 3mtl_A Cell division protein k 100.0 5.2E-39 1.8E-43 353.1 7.6 262 679-952 2-282 (324)
199 1xbb_A Tyrosine-protein kinase 100.0 1.5E-38 5.2E-43 344.1 11.1 255 678-957 15-278 (291)
200 2i1m_A Macrophage colony-stimu 100.0 7.6E-39 2.6E-43 353.8 8.7 261 678-957 45-325 (333)
201 3eqc_A Dual specificity mitoge 100.0 7.7E-38 2.6E-42 349.6 16.8 256 678-952 32-325 (360)
202 3i6u_A CDS1, serine/threonine- 100.0 3.8E-38 1.3E-42 358.1 14.5 253 677-952 133-400 (419)
203 2ozo_A Tyrosine-protein kinase 100.0 2E-38 7E-43 376.5 12.6 248 686-957 343-597 (613)
204 2rku_A Serine/threonine-protei 100.0 1.5E-37 5E-42 337.0 18.2 249 678-952 14-266 (294)
205 1t4h_A Serine/threonine-protei 100.0 2.7E-37 9.1E-42 334.2 20.0 248 679-952 26-283 (290)
206 2jii_A Serine/threonine-protei 100.0 2.7E-38 9.2E-43 351.9 12.5 262 678-957 41-335 (352)
207 2j7t_A Serine/threonine-protei 100.0 6.9E-38 2.4E-42 341.1 15.3 254 677-952 17-276 (302)
208 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.1E-37 7E-42 346.6 19.5 252 677-956 63-337 (365)
209 2vgo_A Serine/threonine-protei 100.0 1.4E-37 4.7E-42 335.4 17.3 247 678-952 13-263 (284)
210 2yfx_A Tyrosine-protein kinase 100.0 2.9E-38 1E-42 348.0 12.3 261 678-958 29-304 (327)
211 3byv_A Rhoptry kinase; malaria 100.0 6.1E-39 2.1E-43 360.4 6.9 243 678-951 72-359 (377)
212 3mwu_A Calmodulin-domain prote 100.0 1.1E-37 3.9E-42 362.1 17.5 251 678-952 21-277 (486)
213 3n9x_A Phosphotransferase; mal 100.0 1.3E-37 4.4E-42 355.5 17.6 199 678-884 25-253 (432)
214 3lij_A Calcium/calmodulin depe 100.0 1.1E-37 3.7E-42 362.9 17.2 251 678-952 36-292 (494)
215 1cm8_A Phosphorylated MAP kina 100.0 1.4E-37 4.7E-42 347.2 17.3 258 678-952 24-308 (367)
216 2owb_A Serine/threonine-protei 100.0 1.5E-37 5.1E-42 343.2 17.3 249 678-952 40-292 (335)
217 3a7i_A MST3 kinase, serine/thr 100.0 4.2E-38 1.4E-42 342.9 12.6 249 678-952 21-271 (303)
218 3ll6_A Cyclin G-associated kin 100.0 6.9E-38 2.4E-42 346.9 14.5 255 678-957 27-307 (337)
219 3bz5_A Internalin-J, INLJ; leu 100.0 9.7E-37 3.3E-41 349.5 24.5 364 52-553 28-392 (457)
220 3rp9_A Mitogen-activated prote 100.0 1.9E-37 6.4E-42 357.9 18.6 194 678-879 52-280 (458)
221 2y7j_A Phosphorylase B kinase 100.0 3.5E-37 1.2E-41 343.8 20.2 256 674-952 89-360 (365)
222 2h6d_A 5'-AMP-activated protei 100.0 1.5E-37 5.1E-42 333.6 16.5 247 679-952 11-262 (276)
223 3fme_A Dual specificity mitoge 100.0 6E-38 2.1E-42 339.4 13.5 253 678-951 6-266 (290)
224 4fl3_A Tyrosine-protein kinase 100.0 3.4E-38 1.2E-42 375.3 11.9 249 685-958 375-631 (635)
225 3q60_A ROP5B; pseudokinase, tr 100.0 2.9E-38 9.8E-43 354.2 10.6 252 679-951 62-352 (371)
226 1x8b_A WEE1HU, WEE1-like prote 100.0 3.6E-38 1.2E-42 340.9 11.0 248 677-952 9-280 (289)
227 4aaa_A Cyclin-dependent kinase 100.0 2.4E-38 8.2E-43 349.2 9.3 263 678-952 24-307 (331)
228 3com_A Serine/threonine-protei 100.0 4.4E-37 1.5E-41 336.7 19.0 252 677-952 27-279 (314)
229 3nyv_A Calmodulin-domain prote 100.0 6.9E-38 2.4E-42 364.2 13.2 251 678-952 25-282 (484)
230 2vwi_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 343.8 9.9 264 678-952 14-288 (303)
231 3sv0_A Casein kinase I-like; t 100.0 2.8E-37 9.7E-42 354.3 18.1 261 678-957 6-277 (483)
232 3pg1_A Mitogen-activated prote 100.0 1.2E-37 4.1E-42 348.4 14.6 272 668-952 11-317 (362)
233 3pfq_A PKC-B, PKC-beta, protei 100.0 2.8E-37 9.6E-42 370.0 18.1 249 677-951 339-597 (674)
234 3q5i_A Protein kinase; CDPK, m 100.0 5.6E-37 1.9E-41 357.8 20.0 252 677-952 34-302 (504)
235 3an0_A Dual specificity mitoge 100.0 1.1E-37 3.7E-42 345.5 13.3 255 677-952 49-311 (340)
236 3eb0_A Putative uncharacterize 100.0 1.6E-37 5.6E-42 349.5 14.8 263 676-952 4-322 (383)
237 1u46_A ACK-1, activated CDC42 100.0 5.3E-38 1.8E-42 340.0 10.3 257 678-957 17-283 (291)
238 3nsz_A CK II alpha, casein kin 100.0 2E-37 6.8E-42 342.0 14.8 257 678-952 35-320 (330)
239 2clq_A Mitogen-activated prote 100.0 1.1E-37 3.8E-42 338.2 12.6 253 680-952 23-279 (295)
240 3lm5_A Serine/threonine-protei 100.0 8.6E-38 2.9E-42 343.8 11.8 255 677-952 26-288 (327)
241 2id5_A Lingo-1, leucine rich r 100.0 4.4E-36 1.5E-40 348.9 26.5 320 46-427 15-334 (477)
242 2r3i_A Cell division protein k 100.0 5.2E-37 1.8E-41 333.6 17.4 263 679-952 3-284 (299)
243 3mi9_A Cell division protein k 100.0 3.5E-37 1.2E-41 342.9 16.4 264 678-952 16-312 (351)
244 2xrw_A Mitogen-activated prote 100.0 4.6E-37 1.6E-41 344.1 17.3 263 678-952 24-319 (371)
245 2pml_X PFPK7, Ser/Thr protein 100.0 2E-37 6.7E-42 344.8 14.0 259 678-952 30-323 (348)
246 1phk_A Phosphorylase kinase; g 100.0 5.2E-37 1.8E-41 333.4 16.6 251 678-951 16-283 (298)
247 3qyz_A Mitogen-activated prote 100.0 3.8E-37 1.3E-41 344.1 15.7 262 678-952 26-314 (364)
248 3rgf_A Cyclin-dependent kinase 100.0 1.2E-37 4.2E-42 353.4 11.5 268 679-952 20-334 (405)
249 2j0j_A Focal adhesion kinase 1 100.0 1E-37 3.6E-42 372.5 11.4 256 678-957 389-650 (656)
250 4e7w_A Glycogen synthase kinas 100.0 1.5E-37 5.1E-42 350.4 11.8 261 678-952 39-322 (394)
251 2ycf_A Serine/threonine-protei 100.0 2.2E-37 7.4E-42 340.2 12.8 252 678-952 9-275 (322)
252 1j1b_A Glycogen synthase kinas 100.0 3.6E-37 1.2E-41 350.2 14.7 260 679-952 54-337 (420)
253 2fst_X Mitogen-activated prote 100.0 1.7E-37 5.8E-42 346.0 11.7 258 678-952 28-312 (367)
254 2wtk_C Serine/threonine-protei 100.0 2.6E-36 9E-41 329.1 20.2 251 678-952 4-264 (305)
255 3kvw_A DYRK2, dual specificity 100.0 9.2E-37 3.1E-41 347.6 17.0 198 678-886 96-302 (429)
256 1zy4_A Serine/threonine-protei 100.0 8.1E-37 2.8E-41 332.8 15.3 252 678-952 5-284 (303)
257 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.1E-37 1.4E-41 337.8 12.9 256 678-958 32-302 (319)
258 2vx3_A Dual specificity tyrosi 100.0 1.2E-36 3.9E-41 342.5 16.8 200 678-886 53-261 (382)
259 1wak_A Serine/threonine-protei 100.0 6.9E-37 2.4E-41 347.2 14.8 264 678-952 36-392 (397)
260 2x7f_A TRAF2 and NCK-interacti 100.0 4.2E-37 1.4E-41 338.8 12.6 253 677-952 22-287 (326)
261 1blx_A Cyclin-dependent kinase 100.0 9.4E-37 3.2E-41 336.0 14.9 264 677-952 9-297 (326)
262 1z57_A Dual specificity protei 100.0 2.8E-36 9.6E-41 334.2 17.7 265 678-957 13-336 (339)
263 2wei_A Calmodulin-domain prote 100.0 3.3E-36 1.1E-40 325.0 17.8 252 677-952 20-277 (287)
264 3aln_A Dual specificity mitoge 100.0 1.3E-36 4.5E-41 334.9 14.7 257 678-952 21-286 (327)
265 3cek_A Dual specificity protei 100.0 2.5E-36 8.7E-41 330.3 16.6 252 677-952 26-293 (313)
266 3e3p_A Protein kinase, putativ 100.0 1.6E-36 5.6E-41 339.1 15.4 271 673-952 17-315 (360)
267 2rio_A Serine/threonine-protei 100.0 1E-36 3.6E-41 348.0 13.6 253 680-952 16-296 (434)
268 2b9h_A MAP kinase FUS3, mitoge 100.0 2.3E-36 7.9E-41 336.9 15.9 262 678-952 10-306 (353)
269 3fhr_A MAP kinase-activated pr 100.0 1.1E-36 3.8E-41 336.1 12.9 253 678-952 27-288 (336)
270 2i6l_A Mitogen-activated prote 100.0 1.1E-36 3.8E-41 334.5 12.3 262 678-952 10-306 (320)
271 4exu_A Mitogen-activated prote 100.0 4E-36 1.4E-40 336.4 16.9 257 678-952 41-324 (371)
272 3qa8_A MGC80376 protein; kinas 100.0 2.9E-36 9.9E-41 352.1 15.5 266 678-949 13-295 (676)
273 3o6n_A APL1; leucine-rich repe 100.0 3.3E-35 1.1E-39 332.0 23.3 218 313-575 161-378 (390)
274 2iwi_A Serine/threonine-protei 100.0 7.4E-37 2.5E-41 334.5 8.7 242 677-952 29-284 (312)
275 3p23_A Serine/threonine-protei 100.0 4.7E-36 1.6E-40 341.2 14.7 250 678-952 23-284 (432)
276 1q8y_A SR protein kinase; tran 100.0 4.2E-36 1.4E-40 337.6 14.0 264 678-952 18-334 (373)
277 3coi_A Mitogen-activated prote 100.0 1.2E-35 4E-40 330.8 16.9 256 678-952 23-306 (353)
278 3a99_A Proto-oncogene serine/t 100.0 1.9E-36 6.7E-41 331.9 9.8 241 678-952 42-294 (320)
279 2eu9_A Dual specificity protei 100.0 1.9E-35 6.5E-40 329.9 17.7 260 678-952 18-334 (355)
280 2dyl_A Dual specificity mitoge 100.0 1E-35 3.6E-40 326.4 15.1 252 678-952 24-284 (318)
281 3oja_B Anopheles plasmodium-re 100.0 1.2E-34 4.1E-39 345.5 23.6 333 138-575 52-384 (597)
282 3o6n_A APL1; leucine-rich repe 100.0 2.6E-34 8.8E-39 324.7 23.2 311 184-573 44-354 (390)
283 3uqc_A Probable conserved tran 100.0 9.2E-35 3.1E-39 312.4 15.0 231 679-958 31-265 (286)
284 4fmz_A Internalin; leucine ric 100.0 2.1E-33 7.2E-38 312.1 26.2 306 158-548 41-346 (347)
285 3oja_B Anopheles plasmodium-re 100.0 9.2E-34 3.2E-38 337.8 23.4 312 184-574 50-361 (597)
286 4fmz_A Internalin; leucine ric 100.0 4.2E-33 1.4E-37 309.6 26.3 306 38-425 40-345 (347)
287 2pzi_A Probable serine/threoni 100.0 8.4E-35 2.9E-39 351.5 12.3 239 678-956 79-326 (681)
288 1ogq_A PGIP-2, polygalacturona 100.0 3E-34 1E-38 312.9 15.3 259 317-580 50-312 (313)
289 3dzo_A Rhoptry kinase domain; 100.0 1.1E-34 3.6E-39 329.1 9.9 244 678-952 77-364 (413)
290 3m2w_A MAP kinase-activated pr 100.0 3.7E-34 1.3E-38 310.7 13.4 231 679-952 17-257 (299)
291 2ft3_A Biglycan; proteoglycan, 100.0 1E-32 3.5E-37 304.2 23.8 300 31-400 16-331 (332)
292 2ft3_A Biglycan; proteoglycan, 100.0 2E-32 6.8E-37 301.8 25.8 289 185-546 33-331 (332)
293 2vuw_A Serine/threonine-protei 100.0 1.1E-34 3.8E-39 320.6 6.5 245 678-952 19-332 (336)
294 1xku_A Decorin; proteoglycan, 100.0 7.2E-32 2.5E-36 297.2 27.0 221 42-270 31-253 (330)
295 1xku_A Decorin; proteoglycan, 100.0 6.4E-32 2.2E-36 297.6 25.6 248 185-454 31-280 (330)
296 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-31 4.1E-36 292.3 17.6 248 42-304 50-302 (313)
297 1z7x_W Ribonuclease inhibitor; 100.0 8.8E-35 3E-39 336.8 -12.5 360 43-452 4-413 (461)
298 1z7x_W Ribonuclease inhibitor; 100.0 2.8E-34 9.5E-39 332.6 -11.0 235 36-270 22-297 (461)
299 2z80_A TOLL-like receptor 2, v 100.0 1.8E-29 6.1E-34 280.8 16.5 193 337-552 120-318 (353)
300 3zyj_A Leucine-rich repeat-con 100.0 2.2E-28 7.4E-33 280.5 21.0 247 297-574 47-295 (440)
301 2z80_A TOLL-like receptor 2, v 100.0 8.7E-29 3E-33 275.2 16.9 275 47-380 36-316 (353)
302 3zyi_A Leucine-rich repeat-con 100.0 3.1E-28 1E-32 280.3 21.1 247 297-574 58-306 (452)
303 4fcg_A Uncharacterized protein 100.0 1E-27 3.5E-32 262.7 21.1 225 41-270 80-314 (328)
304 1ozn_A Reticulon 4 receptor; N 100.0 6.3E-28 2.2E-32 259.7 18.4 224 45-271 14-239 (285)
305 2z66_A Variable lymphocyte rec 100.0 3.2E-28 1.1E-32 264.9 16.3 242 27-271 15-262 (306)
306 2z66_A Variable lymphocyte rec 100.0 5.2E-28 1.8E-32 263.3 17.4 135 317-451 126-262 (306)
307 3zyj_A Leucine-rich repeat-con 100.0 2.5E-27 8.6E-32 271.6 22.4 239 28-270 52-292 (440)
308 3ogk_B Coronatine-insensitive 100.0 1.3E-30 4.4E-35 311.9 -5.3 404 36-454 67-530 (592)
309 3zyi_A Leucine-rich repeat-con 99.9 3.1E-27 1.1E-31 271.9 22.4 235 32-270 67-303 (452)
310 1ozn_A Reticulon 4 receptor; N 99.9 2.3E-27 7.8E-32 255.3 19.2 250 185-497 32-284 (285)
311 3ogk_B Coronatine-insensitive 99.9 3E-30 1E-34 308.7 -5.2 252 183-445 162-444 (592)
312 4fcg_A Uncharacterized protein 99.9 7.2E-27 2.5E-31 256.0 20.8 238 184-453 80-317 (328)
313 3o53_A Protein LRIM1, AGAP0063 99.9 1E-28 3.5E-33 269.9 5.5 217 42-270 10-227 (317)
314 1wwl_A Monocyte differentiatio 99.9 3.3E-28 1.1E-32 265.2 8.5 245 294-550 44-311 (312)
315 1wwl_A Monocyte differentiatio 99.9 7.5E-28 2.6E-32 262.4 9.0 230 33-270 56-309 (312)
316 3g06_A SSPH2 (leucine-rich rep 99.9 8.9E-26 3E-30 265.8 25.7 268 43-437 41-308 (622)
317 3g06_A SSPH2 (leucine-rich rep 99.9 1.3E-25 4.6E-30 264.3 26.3 193 21-270 42-234 (622)
318 3o53_A Protein LRIM1, AGAP0063 99.9 1.4E-27 4.7E-32 260.9 7.1 247 179-451 28-277 (317)
319 4azs_A Methyltransferase WBDD; 99.9 3.9E-28 1.3E-32 284.3 2.6 184 687-882 242-437 (569)
320 3oja_A Leucine-rich immune mol 99.9 4.7E-27 1.6E-31 271.7 7.9 244 316-575 33-286 (487)
321 3oja_A Leucine-rich immune mol 99.9 1.4E-26 4.6E-31 267.8 10.3 192 67-270 35-227 (487)
322 2z62_A TOLL-like receptor 4, v 99.9 6.3E-25 2.2E-29 235.0 19.0 207 67-274 29-241 (276)
323 1p9a_G Platelet glycoprotein I 99.9 1.3E-24 4.3E-29 233.5 19.1 206 337-574 6-211 (290)
324 2z62_A TOLL-like receptor 4, v 99.9 2.4E-24 8.2E-29 230.4 20.9 228 298-552 12-241 (276)
325 2p1m_B Transport inhibitor res 99.9 2.7E-27 9.4E-32 283.2 -5.5 377 138-569 106-517 (594)
326 2p1m_B Transport inhibitor res 99.9 1.2E-27 4.1E-32 286.3 -9.3 440 45-549 46-545 (594)
327 2o6q_A Variable lymphocyte rec 99.9 1.5E-23 5E-28 223.3 21.8 204 43-272 17-220 (270)
328 2o6q_A Variable lymphocyte rec 99.9 1.5E-23 5.2E-28 223.2 21.6 207 66-310 16-222 (270)
329 3en9_A Glycoprotease, O-sialog 99.9 4.1E-25 1.4E-29 257.3 5.3 184 682-883 339-538 (540)
330 1p9a_G Platelet glycoprotein I 99.9 4E-23 1.4E-27 221.8 19.8 203 62-270 6-208 (290)
331 3rfs_A Internalin B, repeat mo 99.9 2.1E-23 7.2E-28 222.3 16.3 137 313-449 81-217 (272)
332 3rfs_A Internalin B, repeat mo 99.9 1.4E-23 4.6E-28 223.8 14.6 211 181-438 37-247 (272)
333 2xwt_C Thyrotropin receptor; s 99.9 1.5E-22 5.2E-27 211.4 16.4 205 31-267 23-236 (239)
334 4glp_A Monocyte differentiatio 99.9 5.7E-23 2E-27 223.6 12.8 225 318-549 65-308 (310)
335 2xwt_C Thyrotropin receptor; s 99.9 1.5E-22 5.1E-27 211.4 15.2 197 67-304 32-237 (239)
336 3goz_A Leucine-rich repeat-con 99.9 2.8E-24 9.6E-29 239.4 1.3 128 143-270 4-151 (362)
337 2ca6_A RAN GTPase-activating p 99.9 5.6E-24 1.9E-28 239.5 2.7 241 32-272 22-318 (386)
338 3goz_A Leucine-rich repeat-con 99.9 6.7E-24 2.3E-28 236.3 2.6 224 47-270 3-266 (362)
339 3m19_A Variable lymphocyte rec 99.9 1E-21 3.5E-26 206.6 17.4 184 341-553 14-197 (251)
340 1h6u_A Internalin H; cell adhe 99.9 2.9E-22 9.8E-27 217.4 13.4 194 39-271 38-231 (308)
341 4glp_A Monocyte differentiatio 99.9 2.3E-22 8E-27 218.7 12.5 85 337-426 220-307 (310)
342 2ast_B S-phase kinase-associat 99.9 8.9E-23 3E-27 225.2 8.5 254 42-315 47-315 (336)
343 4ay9_X Follicle-stimulating ho 99.9 8.5E-22 2.9E-26 218.1 14.4 188 32-222 22-215 (350)
344 2ca6_A RAN GTPase-activating p 99.9 7.5E-24 2.6E-28 238.4 -2.5 255 176-453 23-319 (386)
345 2ast_B S-phase kinase-associat 99.9 1.2E-22 4E-27 224.2 6.8 149 68-243 49-205 (336)
346 1h6u_A Internalin H; cell adhe 99.9 1.9E-21 6.6E-26 210.9 15.8 194 17-248 39-232 (308)
347 3m19_A Variable lymphocyte rec 99.9 6.3E-21 2.2E-25 200.5 18.9 180 43-248 15-194 (251)
348 1zar_A RIO2 kinase; serine kin 99.9 2E-22 6.9E-27 214.7 6.9 152 672-856 83-252 (282)
349 4ay9_X Follicle-stimulating ho 99.9 5.5E-21 1.9E-25 211.5 18.2 241 297-572 13-259 (350)
350 3cvr_A Invasion plasmid antige 99.8 7.5E-21 2.6E-25 221.0 13.1 188 43-257 60-254 (571)
351 2o6s_A Variable lymphocyte rec 99.8 7.6E-20 2.6E-24 186.3 16.1 132 318-449 29-160 (208)
352 2o6s_A Variable lymphocyte rec 99.8 1.1E-19 3.8E-24 185.1 14.1 181 45-258 10-190 (208)
353 1h6t_A Internalin B; cell adhe 99.8 9.4E-20 3.2E-24 195.7 10.4 171 63-246 43-213 (291)
354 3cvr_A Invasion plasmid antige 99.8 4.4E-19 1.5E-23 206.1 16.8 180 67-273 60-246 (571)
355 1m9s_A Internalin B; cell inva 99.8 1.8E-19 6.2E-24 212.0 11.7 188 44-270 23-210 (605)
356 1m9s_A Internalin B; cell inva 99.8 4.4E-19 1.5E-23 208.7 12.2 100 162-269 22-121 (605)
357 2v9t_B SLIT homolog 2 protein 99.8 4.1E-19 1.4E-23 182.2 10.4 135 390-550 33-167 (220)
358 1dce_A Protein (RAB geranylger 99.8 2E-21 6.7E-26 227.4 -8.3 200 39-271 346-547 (567)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 3.7E-19 1.3E-23 182.5 9.5 157 368-553 14-171 (220)
360 2xot_A Amphoterin-induced prot 99.8 1.2E-18 4.1E-23 193.5 13.4 177 69-271 21-203 (361)
361 1h6t_A Internalin B; cell adhe 99.8 8.6E-19 3E-23 188.2 11.4 175 38-225 42-216 (291)
362 1dce_A Protein (RAB geranylger 99.8 5.5E-21 1.9E-25 223.6 -7.2 203 87-348 346-567 (567)
363 1xeu_A Internalin C; cellular 99.8 4.4E-19 1.5E-23 187.3 7.7 169 40-222 17-185 (263)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 4.9E-18 1.7E-22 174.1 14.5 134 139-272 34-168 (220)
365 2xot_A Amphoterin-induced prot 99.8 4.7E-18 1.6E-22 188.7 15.2 157 139-307 41-203 (361)
366 2v9t_B SLIT homolog 2 protein 99.8 5.6E-18 1.9E-22 173.7 14.5 153 296-451 14-166 (220)
367 3e6j_A Variable lymphocyte rec 99.8 6.2E-18 2.1E-22 174.6 14.7 152 367-548 21-172 (229)
368 1xeu_A Internalin C; cellular 99.7 3E-18 1E-22 180.9 9.6 169 183-378 17-185 (263)
369 3e6j_A Variable lymphocyte rec 99.7 2.6E-17 8.9E-22 169.9 15.9 154 344-527 22-175 (229)
370 1zth_A RIO1 serine protein kin 99.7 7E-18 2.4E-22 177.5 10.4 139 679-832 47-219 (258)
371 3sb4_A Hypothetical leucine ri 99.7 3.1E-18 1.1E-22 187.8 7.5 221 184-443 100-327 (329)
372 4ezg_A Putative uncharacterize 99.7 2.5E-17 8.4E-22 166.0 13.3 109 156-268 39-147 (197)
373 3sb4_A Hypothetical leucine ri 99.7 2.1E-18 7.2E-23 189.1 4.3 218 316-542 100-328 (329)
374 4ezg_A Putative uncharacterize 99.7 5.4E-17 1.8E-21 163.4 12.1 154 62-270 40-194 (197)
375 4b8c_D Glucose-repressible alc 99.7 8.7E-18 3E-22 203.0 7.1 191 332-549 215-405 (727)
376 1w8a_A SLIT protein; signaling 99.7 2.6E-17 9E-22 164.8 7.6 132 392-552 11-143 (192)
377 4b8c_D Glucose-repressible alc 99.7 3.1E-17 1.1E-21 198.1 7.6 150 98-275 209-359 (727)
378 4fdw_A Leucine rich hypothetic 99.7 2.6E-15 9.1E-20 167.7 21.9 249 131-426 129-383 (401)
379 1w8a_A SLIT protein; signaling 99.7 1.6E-16 5.5E-21 159.1 10.7 180 368-580 11-192 (192)
380 2wfh_A SLIT homolog 2 protein 99.6 3.8E-16 1.3E-20 156.2 11.7 128 441-574 14-142 (193)
381 4fdw_A Leucine rich hypothetic 99.6 2.3E-15 7.7E-20 168.3 18.7 255 148-450 123-383 (401)
382 4fs7_A Uncharacterized protein 99.6 1E-14 3.6E-19 163.9 20.8 156 58-219 63-218 (394)
383 4gyi_A RIO2 kinase; protein ki 99.6 4.7E-16 1.6E-20 169.0 7.6 140 679-833 95-266 (397)
384 2ell_A Acidic leucine-rich nuc 99.6 2.3E-15 7.9E-20 147.2 10.9 131 138-270 25-160 (168)
385 2ell_A Acidic leucine-rich nuc 99.6 2.2E-15 7.4E-20 147.4 10.6 136 317-454 24-164 (168)
386 4fs7_A Uncharacterized protein 99.6 1.3E-14 4.5E-19 163.1 18.4 249 148-446 58-306 (394)
387 2wfh_A SLIT homolog 2 protein 99.6 4.3E-15 1.5E-19 148.5 12.8 128 140-271 13-140 (193)
388 2je0_A Acidic leucine-rich nuc 99.6 2.5E-15 8.7E-20 143.7 8.8 127 138-266 18-149 (149)
389 2o6r_A Variable lymphocyte rec 99.6 7.5E-15 2.6E-19 144.9 12.2 129 440-573 10-139 (177)
390 2je0_A Acidic leucine-rich nuc 99.6 7.5E-15 2.6E-19 140.4 10.3 130 184-350 16-149 (149)
391 2o6r_A Variable lymphocyte rec 99.6 1.4E-14 4.9E-19 142.9 12.2 131 140-273 10-140 (177)
392 1a9n_A U2A', U2A'; complex (nu 99.5 5.5E-14 1.9E-18 138.5 9.6 105 162-270 43-153 (176)
393 1a9n_A U2A', U2A'; complex (nu 99.5 5.3E-14 1.8E-18 138.6 8.8 105 138-246 43-153 (176)
394 1ds9_A Outer arm dynein; leuci 99.5 1.1E-15 3.8E-20 153.9 -4.6 44 181-224 111-155 (198)
395 3g39_A Variable lymphocyte rec 99.4 2.5E-13 8.4E-18 132.7 10.6 87 487-573 30-117 (170)
396 3g39_A Variable lymphocyte rec 99.4 3.3E-13 1.1E-17 131.8 11.0 112 438-554 10-121 (170)
397 1ds9_A Outer arm dynein; leuci 99.4 1.5E-15 5.1E-20 153.0 -6.2 154 39-222 15-185 (198)
398 2r9u_A Variable lymphocyte rec 99.4 5.1E-13 1.7E-17 130.9 11.1 104 468-574 17-121 (174)
399 2r9u_A Variable lymphocyte rec 99.4 6.4E-13 2.2E-17 130.2 10.6 110 440-554 15-124 (174)
400 4gt6_A Cell surface protein; l 99.4 1.3E-11 4.3E-16 138.6 21.4 312 83-448 56-368 (394)
401 4gt6_A Cell surface protein; l 99.4 1.8E-11 6.3E-16 137.3 22.7 331 59-449 56-390 (394)
402 3un9_A NLR family member X1; l 99.3 1.9E-13 6.4E-18 151.2 -1.2 118 139-256 128-262 (372)
403 2ifg_A High affinity nerve gro 99.3 5E-12 1.7E-16 139.5 9.5 106 467-574 12-119 (347)
404 3un9_A NLR family member X1; l 99.2 1.5E-12 5.2E-17 144.0 0.1 133 138-270 102-252 (372)
405 3tm0_A Aminoglycoside 3'-phosp 99.2 2.8E-11 9.7E-16 127.6 9.9 145 676-830 11-212 (263)
406 2ifg_A High affinity nerve gro 99.2 3.6E-11 1.2E-15 132.6 10.2 104 46-151 12-117 (347)
407 4h09_A Hypothetical leucine ri 99.2 1.4E-09 4.9E-14 121.2 23.0 124 332-459 231-354 (379)
408 4h09_A Hypothetical leucine ri 99.2 1.9E-09 6.4E-14 120.3 22.9 317 36-413 40-356 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 2.1E-10 7.1E-15 120.9 7.2 129 688-831 29-214 (264)
410 2ra8_A Uncharacterized protein 98.9 4.3E-10 1.5E-14 123.0 5.2 84 183-268 250-341 (362)
411 3dxp_A Putative acyl-COA dehyd 98.8 4.9E-09 1.7E-13 115.9 9.7 141 684-831 43-248 (359)
412 2ra8_A Uncharacterized protein 98.8 1E-09 3.4E-14 120.1 2.4 84 159-244 250-341 (362)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 2.5E-09 8.4E-14 115.3 3.6 186 684-883 25-287 (304)
414 3r70_A Aminoglycoside phosphot 98.4 8.8E-07 3E-11 95.8 11.5 137 680-832 38-238 (320)
415 1io0_A Tropomodulin; LRR prote 98.4 6.6E-08 2.2E-12 95.3 2.2 114 157-270 32-164 (185)
416 3d1u_A Putative fructosamine-3 98.3 1.8E-06 6.2E-11 91.3 11.2 75 684-762 20-97 (288)
417 3rw6_A Nuclear RNA export fact 98.3 1.3E-07 4.5E-12 97.7 1.6 59 481-541 190-257 (267)
418 3rw6_A Nuclear RNA export fact 98.3 1.9E-07 6.6E-12 96.5 2.7 80 182-263 167-257 (267)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 3.3E-06 1.1E-10 89.0 12.2 135 686-831 31-223 (272)
420 3tdw_A Gentamicin resistance p 98.2 6.4E-06 2.2E-10 88.3 12.3 136 684-831 24-224 (306)
421 1io0_A Tropomodulin; LRR prote 98.2 2.8E-07 9.6E-12 90.7 0.7 121 107-246 29-164 (185)
422 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.2E-05 3.9E-10 88.3 10.3 142 684-831 46-243 (362)
423 3e4g_A ATP synthase subunit S, 98.0 1.9E-06 6.4E-11 82.4 3.0 84 185-268 61-150 (176)
424 3ats_A Putative uncharacterize 98.0 6.9E-06 2.4E-10 90.4 6.8 79 685-763 26-121 (357)
425 3e4g_A ATP synthase subunit S, 97.9 5.6E-06 1.9E-10 79.1 3.4 85 162-246 62-153 (176)
426 2q83_A YTAA protein; 2635576, 97.8 0.0001 3.5E-09 80.4 13.6 141 685-830 38-251 (346)
427 2olc_A MTR kinase, methylthior 97.7 4.3E-05 1.5E-09 85.3 8.6 75 684-760 35-120 (397)
428 3f7w_A Putative fructosamine-3 97.6 0.00029 9.8E-09 74.6 11.9 78 681-762 17-97 (288)
429 3jr1_A Putative fructosamine-3 97.6 0.00022 7.7E-09 75.8 10.8 139 684-827 41-232 (312)
430 2pyw_A Uncharacterized protein 97.4 0.00029 9.8E-09 79.1 9.5 79 800-880 231-313 (420)
431 3rfe_A Platelet glycoprotein I 97.4 0.00022 7.6E-09 64.9 6.2 38 537-574 33-71 (130)
432 1pgv_A TMD-1, tropomodulin TMD 97.3 0.0001 3.4E-09 71.9 2.9 109 161-269 41-169 (197)
433 1zyl_A Hypothetical protein YI 97.1 0.0033 1.1E-07 67.7 13.7 161 667-831 9-223 (328)
434 2ppq_A HSK, HK, homoserine kin 97.1 0.00097 3.3E-08 71.8 9.3 160 669-831 7-217 (322)
435 3dxq_A Choline/ethanolamine ki 97.1 0.0013 4.5E-08 70.0 9.7 71 684-762 23-95 (301)
436 3csv_A Aminoglycoside phosphot 97.1 0.0029 1E-07 68.3 12.4 141 686-831 25-217 (333)
437 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00018 6.1E-09 70.1 1.6 86 161-246 70-170 (197)
438 3rfe_A Platelet glycoprotein I 97.0 0.001 3.5E-08 60.5 6.6 60 490-551 11-71 (130)
439 3feg_A Choline/ethanolamine ki 96.9 0.0017 5.7E-08 71.0 8.3 143 684-831 55-254 (379)
440 1nw1_A Choline kinase (49.2 KD 96.7 0.0014 4.8E-08 73.4 6.5 73 684-762 78-159 (429)
441 3c5i_A Choline kinase; choline 96.5 0.0029 9.8E-08 69.5 6.4 73 685-762 39-121 (369)
442 2qg7_A Ethanolamine kinase PV0 96.2 0.0081 2.8E-07 67.5 8.6 73 685-762 114-188 (458)
443 3i1a_A Spectinomycin phosphotr 96.1 0.016 5.5E-07 62.5 9.7 32 800-831 205-236 (339)
444 2yle_A Protein spire homolog 1 96.0 0.021 7.2E-07 55.7 9.0 103 760-882 33-135 (229)
445 3f2s_A CK, chetk-alpha, cholin 95.6 0.029 9.8E-07 61.5 9.4 143 685-831 58-280 (401)
446 3mes_A Choline kinase; malaria 94.9 0.046 1.6E-06 60.5 8.0 74 684-762 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 89.6 0.76 2.6E-05 50.5 8.7 30 802-831 245-280 (401)
448 2jwa_A Receptor tyrosine-prote 87.1 0.59 2E-05 32.2 3.4 6 593-598 15-20 (44)
449 4ano_A ESSB; membrane protein, 71.7 8.6 0.0003 37.5 7.3 114 733-883 48-162 (219)
450 4ann_A ESSB; membrane protein, 71.2 5 0.00017 39.0 5.5 116 733-884 43-158 (215)
451 3cxl_A N-chimerin; SH2, RHO-GA 70.8 0.58 2E-05 52.4 -1.4 58 684-744 147-213 (463)
452 2lz0_A Uncharacterized protein 54.1 29 0.00098 29.1 6.5 46 328-374 7-52 (100)
453 3ls8_A Phosphatidylinositol 3- 49.0 2.9E+02 0.01 31.4 15.5 46 778-830 454-501 (614)
454 1cja_A Protein (actin-fragmin 41.0 98 0.0034 32.2 9.2 139 684-831 74-237 (342)
455 2lz0_A Uncharacterized protein 39.4 48 0.0016 27.6 5.6 45 197-242 8-52 (100)
456 2k1k_A Ephrin type-A receptor 39.3 39 0.0013 22.6 3.8 12 593-604 10-21 (38)
457 2ks1_B Epidermal growth factor 35.2 48 0.0017 22.9 3.9 13 593-605 14-27 (44)
458 2l2t_A Receptor tyrosine-prote 34.6 55 0.0019 22.6 4.0 12 593-604 13-25 (44)
459 2y3a_A Phosphatidylinositol-4, 23.6 3E+02 0.01 33.7 10.9 25 806-830 940-964 (1092)
460 3hhm_A Phosphatidylinositol-4, 23.3 2.2E+02 0.0075 34.9 9.4 60 761-830 899-961 (1091)
461 2jwa_A Receptor tyrosine-prote 20.2 1.4E+02 0.0046 20.7 3.9 8 595-602 13-20 (44)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.1e-70 Score=673.21 Aligned_cols=581 Identities=30% Similarity=0.463 Sum_probs=471.1
Q ss_pred ccccCCCCCcCccccCccchhhhhhc-CCcccCCCc--ccCCCccccEEecCCCcccccCCcCc-cCCCCCcEEEcCCCc
Q 002155 2 LSFNALSGSLPEELSDLPILTFAAEK-NQLSGSLPS--WLGNWNQMESLLLSSNQFIGKIPPEI-GNCSMLKSISLSNNF 77 (959)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lp~--~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~Ls~n~ 77 (959)
+++|++. .+|+.++.+..|+.++.. |++.|.+|. .++++++|++|+|++|++.+.+|..+ ..+++|++|+|++|+
T Consensus 84 ~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 84 LSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp CTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 3455555 455888888888666555 556677887 88888888888888888887777765 788888888888888
Q ss_pred CCCCCCcc---cCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCcccccc
Q 002155 78 LSGSIPRE---LCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGII 153 (959)
Q Consensus 78 l~~~~p~~---~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~ 153 (959)
+++..|.. +.++++|++|++++|.+++..+. ..+++|++|++++|.+.+.+|. +..+ +|++|++++|++++.+
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcc
Confidence 88777666 67777888888888877765443 6777777777777777776666 4444 4777777777777777
Q ss_pred CcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCC-CCCCEEEccCCcCCccCCccccCC
Q 002155 154 PVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNL-SALSVLDLNSNLFDGIIPYELGDC 232 (959)
Q Consensus 154 p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l 232 (959)
|..+..+++|++|++++|.+.+.+|.. .+++|++|+|++|.+++.+|..+..+ ++|++|+|++|.+++.+|..|+.+
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l 317 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGC
T ss_pred cHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcC
Confidence 777777777777777777777666554 67777777777777776677766664 777777777777777777777777
Q ss_pred CCCCEEEcccccCCCCCchh-hhcccCCCeeEcccccCCCCCCCCCcchh---h----------ccCCCCccc--ccccc
Q 002155 233 ISLTTLDLGNNNLSGLIPEK-IADLAQLQCLVLSHNNLSGPIPSKPSSYF---R----------QANMPDLSF--IQHHG 296 (959)
Q Consensus 233 ~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~---~----------~~~~~~l~~--l~~L~ 296 (959)
++|++|+|++|++++.+|.. |..+++|++|++++|++++.+|....... . ....+.+.. +.+|+
T Consensus 318 ~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 397 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397 (768)
T ss_dssp TTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCC
T ss_pred CCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCcc
Confidence 77777777777776555544 77777777777777777665554322111 0 001122222 56789
Q ss_pred ceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcc
Q 002155 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQ 376 (959)
Q Consensus 297 ~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 376 (959)
.|++++|.+++.+|..++.+++|+.|++++|++++..|..|..+++|++|++++|++.+..|..+..+++|+.|++++|+
T Consensus 398 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 477 (768)
T 3rgz_A 398 ELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477 (768)
T ss_dssp EEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccc-
Q 002155 377 LTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDE- 455 (959)
Q Consensus 377 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~- 455 (959)
+++..|..+..+++|++|++++|++++..|.+|+.+++|++|+|++|++++.+|..+..+++|+.|++++|++++..+.
T Consensus 478 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGG
T ss_pred ccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999854443
Q ss_pred cccch-------------------------------------------------------------------hhhhhcee
Q 002155 456 LFSNS-------------------------------------------------------------------AAWKIATM 468 (959)
Q Consensus 456 ~~~~~-------------------------------------------------------------------~~~~l~~L 468 (959)
+|... ....++.|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~L 637 (768)
T 3rgz_A 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637 (768)
T ss_dssp GGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEE
T ss_pred HhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEE
Confidence 22210 01257789
Q ss_pred ccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCc
Q 002155 469 NMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLE 548 (959)
Q Consensus 469 ~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 548 (959)
++++|+++|.+|..|+++++|+.|+|++|+++|.+|..++.+++|++|||++|+++|.+|..+..+++|++|++++|+++
T Consensus 638 dLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp ECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred ECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcccCCCccccccCCCCCCCCCCCCCccccccCccc
Q 002155 549 GMVPRSGICQNLSKISLTGNKDLCGKIIGSNCQVKTFGKLA 589 (959)
Q Consensus 549 ~~~~~~~~~~~l~~l~l~~N~~~c~~~~~~~c~~~~~~~~~ 589 (959)
|.+|..++++++...++.|||++||.|+. .|......++.
T Consensus 718 g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~~~~~~~ 757 (768)
T 3rgz_A 718 GPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPSNADGYA 757 (768)
T ss_dssp EECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSCC-----
T ss_pred ccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCCccCCCC
Confidence 99999999999999999999999999987 88765544444
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.4e-66 Score=633.38 Aligned_cols=564 Identities=31% Similarity=0.432 Sum_probs=504.8
Q ss_pred CccccCCCCC---cCccccCccchhhhhhcCCcccCCCcccCCCccccEEecCCCcccccCCc--CccCCCCCcEEEcCC
Q 002155 1 MLSFNALSGS---LPEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPP--EIGNCSMLKSISLSN 75 (959)
Q Consensus 1 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~Ls~ 75 (959)
+|++++++|. +|+.+..+..|..++...+-+..+|+.|+++++|++|+|++|++.+.+|. .++.+++|++|+|++
T Consensus 56 ~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~ 135 (768)
T 3rgz_A 56 DLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSS 135 (768)
T ss_dssp ECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCS
T ss_pred ECCCCCcCCccCccChhHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcC
Confidence 3788999998 99999999888888877666666779999999999999999999999998 999999999999999
Q ss_pred CcCCCCCCccc-CCCCCCcEEEccCccccccCCcc---cccCCCCceeeecccccccccCcccCCCcccEEeccCCcccc
Q 002155 76 NFLSGSIPREL-CTSESLEEIDLDGNLLTGTIEGV---FEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTG 151 (959)
Q Consensus 76 n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~~~~---~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~ 151 (959)
|.+++.+|..+ ..+++|++|+|++|++++..+.. +.++++|++|++++|.+.+..|. ....+|++|++++|++++
T Consensus 136 n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~l~~L~~L~Ls~n~l~~ 214 (768)
T 3rgz_A 136 NTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV-SRCVNLEFLDVSSNNFST 214 (768)
T ss_dssp SEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC-TTCTTCCEEECCSSCCCS
T ss_pred CccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc-ccCCcCCEEECcCCcCCC
Confidence 99998888776 88999999999999999888877 89999999999999999977665 334469999999999999
Q ss_pred ccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccC
Q 002155 152 IIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGD 231 (959)
Q Consensus 152 ~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 231 (959)
.+|. +.++++|++|++++|.+++.+|..|+++++|++|+|++|.+++..|.. .+++|++|+|++|.+++.+|..+..
T Consensus 215 ~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~ 291 (768)
T 3rgz_A 215 GIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSG 291 (768)
T ss_dssp CCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCT
T ss_pred CCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHh
Confidence 8887 999999999999999999999999999999999999999999877765 8999999999999999889988877
Q ss_pred C-CCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCC-Ccch--hh----------ccCCCCccccc-ccc
Q 002155 232 C-ISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSK-PSSY--FR----------QANMPDLSFIQ-HHG 296 (959)
Q Consensus 232 l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~~--~~----------~~~~~~l~~l~-~L~ 296 (959)
+ ++|++|+|++|++++.+|..|+.+++|++|+|++|.+.|.+|.. .... .+ ..-...+..+. +|+
T Consensus 292 ~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~ 371 (768)
T 3rgz_A 292 ACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLL 371 (768)
T ss_dssp TCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCS
T ss_pred hcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCc
Confidence 5 99999999999999999999999999999999999998766631 0000 00 01112233444 788
Q ss_pred ceecCCCcCCCCCCcccCC--cccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeC
Q 002155 297 VFDLSYNRLSGPIPEELGS--CVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGN 374 (959)
Q Consensus 297 ~l~L~~n~l~~~~p~~~~~--~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 374 (959)
.|++++|.+++.+|..+.. +++|+.|++++|++++.+|..|..+++|++|++++|++++..|..|..+++|+.|++++
T Consensus 372 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 451 (768)
T 3rgz_A 372 TLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 451 (768)
T ss_dssp EEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred EEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCC
Confidence 8888888888877877776 78899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCcc
Q 002155 375 NQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVD 454 (959)
Q Consensus 375 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 454 (959)
|.+++.+|..+..+++|++|++++|++++..|..|.++++|++|+|++|++++.+|..+..+++|+.|++++|++++..+
T Consensus 452 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 531 (768)
T 3rgz_A 452 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531 (768)
T ss_dssp SCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECC
T ss_pred CcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ccccchhhhhhceeccCCcccCCCCCccc---------------------------------------------------
Q 002155 455 ELFSNSAAWKIATMNMSNNLFDGGLPRSL--------------------------------------------------- 483 (959)
Q Consensus 455 ~~~~~~~~~~l~~L~ls~N~l~~~~p~~~--------------------------------------------------- 483 (959)
..+.... +++.|++++|.+.+.+|..+
T Consensus 532 ~~l~~l~--~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 609 (768)
T 3rgz_A 532 AELGDCR--SLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLST 609 (768)
T ss_dssp GGGGGCT--TCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGG
T ss_pred HHHcCCC--CCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccc
Confidence 7777665 79999999999987777543
Q ss_pred -------------------cCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEeccc
Q 002155 484 -------------------GNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAE 544 (959)
Q Consensus 484 -------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 544 (959)
+.+++|+.|+|++|+++|.+|..++.+++|++|+|++|+++|.+|..+..+++|++|+|++
T Consensus 610 ~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~ 689 (768)
T 3rgz_A 610 RNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689 (768)
T ss_dssp TCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCS
T ss_pred ccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCC
Confidence 3467899999999999999999999999999999999999999999999999999999999
Q ss_pred CcCcccCCCC-cccCCCccccccCCCC
Q 002155 545 NRLEGMVPRS-GICQNLSKISLTGNKD 570 (959)
Q Consensus 545 N~l~~~~~~~-~~~~~l~~l~l~~N~~ 570 (959)
|+++|.+|.. ..+..|+.+++++|+.
T Consensus 690 N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 690 NKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp SCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred CcccCcCChHHhCCCCCCEEECcCCcc
Confidence 9999988865 5678899999999973
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.7e-61 Score=586.34 Aligned_cols=566 Identities=20% Similarity=0.204 Sum_probs=469.9
Q ss_pred ccccCCCCCcCccccCccchhhhhhcCC-cccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCC
Q 002155 2 LSFNALSGSLPEELSDLPILTFAAEKNQ-LSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSG 80 (959)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 80 (959)
.|.++++ ++|+++. +.++.++..++ +.+..|..|+++++|++|+|++|++.+..|..|+++++|++|+|++|++++
T Consensus 11 cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 87 (680)
T 1ziw_A 11 CSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQ 87 (680)
T ss_dssp CCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCC
T ss_pred CCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCc
Confidence 4677888 8887765 45555555544 444444568888888888888888887777788888888888888888885
Q ss_pred CCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCccccccCcccc-
Q 002155 81 SIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIW- 158 (959)
Q Consensus 81 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~- 158 (959)
..+..|..+++|++|+|++|+++++++..|+++++|++|++++|.+.+..|..+..+ +|++|++++|++++..+..+.
T Consensus 88 l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 167 (680)
T 1ziw_A 88 LSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDI 167 (680)
T ss_dssp CCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGG
T ss_pred cChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhc
Confidence 555578888888888888888887777888888888888888888887777777665 588888888888877666554
Q ss_pred -cccceeEEEccccccccccCccccCC---------------------------cCCceEeccCCcccccCCccccCCCC
Q 002155 159 -NSETLMEFSAANNLLEGSLPYEVGNA---------------------------AALERLVLTNNMLKGHLPKEIGNLSA 210 (959)
Q Consensus 159 -~~~~L~~L~l~~n~l~~~~~~~~~~l---------------------------~~L~~L~L~~n~i~~~~~~~~~~l~~ 210 (959)
.+++|++|++++|.+++..|..|..+ ++|+.|++++|.+++..|..|.+++.
T Consensus 168 ~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~ 247 (680)
T 1ziw_A 168 FANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKW 247 (680)
T ss_dssp GTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGG
T ss_pred cccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCc
Confidence 45788888888888887777766554 56788888889898888888888765
Q ss_pred --CCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCC
Q 002155 211 --LSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPD 288 (959)
Q Consensus 211 --L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~ 288 (959)
|++|+|++|.+++..|..|+.+++|++|+|++|++++..|..|..+++|+.|++++|...+.++... +....-..
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~---lp~i~~~~ 324 (680)
T 1ziw_A 248 TNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLAS---LPKIDDFS 324 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC---------CCEECTTT
T ss_pred CCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccc---ccccChhh
Confidence 9999999999998888899999999999999999998888899999999999999887654332100 00001114
Q ss_pred ccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCc--ccCCccccCC--CCCCEEEccCCCCCCCCCCCcCCC
Q 002155 289 LSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLS--GKIPGSLSRL--TNLTTLDLSRNQLTGPIPSEFGDS 364 (959)
Q Consensus 289 l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~--~~~~~~~~~l--~~L~~L~Ls~n~l~~~~~~~~~~l 364 (959)
+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.++ ......|..+ ++|+.|++++|++++..|..|..+
T Consensus 325 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 404 (680)
T 1ziw_A 325 FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWL 404 (680)
T ss_dssp TTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTC
T ss_pred cccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCC
Confidence 566788999999999999999999999999999999999854 3344455443 689999999999999999999999
Q ss_pred CcceEEEeeCcccCCccc-cccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCcccc--CCCchhhhcccccce
Q 002155 365 IKLQGLYLGNNQLTGSIP-WSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD--GQLPSSLSNILNLVG 441 (959)
Q Consensus 365 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~ 441 (959)
++|+.|++++|.+++.+| ..+..+++|++|++++|++.+..+..|..+++|++|++++|.+. +..|..+..+++|+.
T Consensus 405 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~ 484 (680)
T 1ziw_A 405 GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI 484 (680)
T ss_dssp TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCE
T ss_pred CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCE
Confidence 999999999999987655 78999999999999999999889999999999999999999987 468899999999999
Q ss_pred EeeccccccCCccccccchhhhhhceeccCCcccCCCCC--------ccccCccccceeeeccccccccCCcCCcCCCCC
Q 002155 442 LYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP--------RSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQL 513 (959)
Q Consensus 442 L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 513 (959)
|++++|+++++++..|.... +++.|++++|.+++..+ ..|.++++|+.|+|++|+++...+..|.++++|
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 562 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLE--KLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCT--TCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred EECCCCCCCcCChhhhcccc--ccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCc
Confidence 99999999999999888766 79999999999986422 247899999999999999995444579999999
Q ss_pred cEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCc--ccCCCccccccCCCCCCCCC
Q 002155 514 EYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSG--ICQNLSKISLTGNKDLCGKI 575 (959)
Q Consensus 514 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~--~~~~l~~l~l~~N~~~c~~~ 575 (959)
++|+|++|+|++..+..|..+++|+.|++++|+++++++... .+.+++.+++.+|||.|+|.
T Consensus 563 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 563 KIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred ceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 999999999998888889999999999999999999888653 57899999999999999764
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.2e-57 Score=551.57 Aligned_cols=539 Identities=22% Similarity=0.200 Sum_probs=471.4
Q ss_pred CccccCCCCCcCccccCccchhhhhhc-CCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCC
Q 002155 1 MLSFNALSGSLPEELSDLPILTFAAEK-NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLS 79 (959)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 79 (959)
.||.|.+++..|+.+..++.|+.++.. |++.+..|.+|++++.|++|+|++|++.+..+..|+++++|++|+|++|+++
T Consensus 31 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~ 110 (680)
T 1ziw_A 31 NLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ 110 (680)
T ss_dssp ECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC
T ss_pred ECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccC
Confidence 378999996666679999999777776 5566777889999999999999999999555557999999999999999999
Q ss_pred CCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccC---CCcccEEeccCCccccccCcc
Q 002155 80 GSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLS---KLPLMVLDLDSNNFTGIIPVS 156 (959)
Q Consensus 80 ~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~---~~~L~~L~ls~n~l~~~~p~~ 156 (959)
+..|..|+.+++|++|++++|.+++..++.|.++++|++|++++|.+.+..+..+. ..+|++|++++|++++..|..
T Consensus 111 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 190 (680)
T 1ziw_A 111 KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGC 190 (680)
T ss_dssp CCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTG
T ss_pred ccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhh
Confidence 87778999999999999999999999999999999999999999999988777554 346999999999999998887
Q ss_pred cccc---------------------------cceeEEEccccccccccCccccCCcC--CceEeccCCcccccCCccccC
Q 002155 157 IWNS---------------------------ETLMEFSAANNLLEGSLPYEVGNAAA--LERLVLTNNMLKGHLPKEIGN 207 (959)
Q Consensus 157 ~~~~---------------------------~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~L~~n~i~~~~~~~~~~ 207 (959)
+..+ ++|++|++++|.+++..|..|.+++. |++|+|++|.+++..+..|..
T Consensus 191 ~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~ 270 (680)
T 1ziw_A 191 FHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAW 270 (680)
T ss_dssp GGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTT
T ss_pred hhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccC
Confidence 7765 45677888888898888999998876 999999999999888899999
Q ss_pred CCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCC-----CCc----hhhhcccCCCeeEcccccCCCCCCCCCc
Q 002155 208 LSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSG-----LIP----EKIADLAQLQCLVLSHNNLSGPIPSKPS 278 (959)
Q Consensus 208 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-----~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 278 (959)
+++|++|+|++|.+.+..|..|.++++|++|++++|...+ .+| ..|..+++|++|++++|.+++..+.
T Consensus 271 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~--- 347 (680)
T 1ziw_A 271 LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSN--- 347 (680)
T ss_dssp CTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTT---
T ss_pred cccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChh---
Confidence 9999999999999999999999999999999999886542 122 3788999999999999999864432
Q ss_pred chhhccCCCCccccccccceecCCCcCCCC--CCcccCCc--ccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCC
Q 002155 279 SYFRQANMPDLSFIQHHGVFDLSYNRLSGP--IPEELGSC--VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLT 354 (959)
Q Consensus 279 ~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~--~p~~~~~~--~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~ 354 (959)
.+..+.+|+.|++++|.+... .+..+..+ ..|+.|++++|++++..|.+|..+++|++|++++|++.
T Consensus 348 ---------~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 418 (680)
T 1ziw_A 348 ---------MFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIG 418 (680)
T ss_dssp ---------TTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCE
T ss_pred ---------HhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCc
Confidence 245567889999999985432 23334333 58999999999999999999999999999999999998
Q ss_pred CCCC-CCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCC--CCCCCccCCcccccccccCCccccCCCch
Q 002155 355 GPIP-SEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLS--GKVPTSFGNLKELTHLDLSFNELDGQLPS 431 (959)
Q Consensus 355 ~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 431 (959)
+..| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.+. +..|..|.++++|++|++++|++++..+.
T Consensus 419 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~ 498 (680)
T 1ziw_A 419 QELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDD 498 (680)
T ss_dssp EECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred cccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChh
Confidence 6544 78999999999999999999888999999999999999999987 56789999999999999999999988888
Q ss_pred hhhcccccceEeeccccccCCcccc--------ccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccC
Q 002155 432 SLSNILNLVGLYLQHNKLSGPVDEL--------FSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEI 503 (959)
Q Consensus 432 ~l~~l~~L~~L~L~~N~l~~~~~~~--------~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 503 (959)
.|..+++|+.|++++|++++++... |.... .++.|++++|.++...+..|.++++|+.|+|++|++++..
T Consensus 499 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~--~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~ 576 (680)
T 1ziw_A 499 MLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLS--HLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLP 576 (680)
T ss_dssp TTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCT--TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred hhccccccCEEeCCCCCccccchhhccCCcchhhcCCC--CCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCC
Confidence 8999999999999999999875443 34333 7999999999999766678999999999999999999777
Q ss_pred CcCCcCCCCCcEEeCCCCcCCCCCCcccc-CCCCccEEecccCcCcccCCC
Q 002155 504 PPDLGNLMQLEYLDVSRNRLCGQIPETMC-SLSNLLYLSLAENRLEGMVPR 553 (959)
Q Consensus 504 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~ 553 (959)
+..|..+++|++|+|++|+|++..|..+. .+++|+.|++++|++.+..+.
T Consensus 577 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 577 ASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred HhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 77789999999999999999998888887 799999999999999987764
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8.3e-57 Score=540.54 Aligned_cols=528 Identities=21% Similarity=0.197 Sum_probs=406.7
Q ss_pred hhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccc
Q 002155 25 AEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTG 104 (959)
Q Consensus 25 ~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 104 (959)
+-.+.-...+|..+.. .+++|+|++|++.+..|..|+++++|++|+|++|++++..|.+|.++++|++|+|++|++++
T Consensus 18 ~c~~~~l~~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~ 95 (606)
T 3t6q_A 18 NCENLGLNEIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIF 95 (606)
T ss_dssp ECTTSCCSSCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSE
T ss_pred ECCCCCcccCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccc
Confidence 3344445567776654 67888888888887777788888888888888888887778888888888888888888887
Q ss_pred cCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccC
Q 002155 105 TIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGN 183 (959)
Q Consensus 105 ~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 183 (959)
..|..|+++++|++|++++|.+.+..|..+..+ +|++|++++|++++..+..+..+++|++|++++|.+++..|..|+.
T Consensus 96 ~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 175 (606)
T 3t6q_A 96 MAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSS 175 (606)
T ss_dssp ECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHT
T ss_pred cChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhh
Confidence 778888888888888888888887666666666 4888888888888755455555888888888888888777777888
Q ss_pred CcCCc--eEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccC-----CCCCchhhhcc
Q 002155 184 AAALE--RLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNL-----SGLIPEKIADL 256 (959)
Q Consensus 184 l~~L~--~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l-----~~~~~~~~~~l 256 (959)
+++|+ .|++++|.+++..|..|.. .+|+.|++++|. ..+..+.++.++....+.-+.+ ..+.+..|..+
T Consensus 176 l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 176 LQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp TTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 88888 7888888888766665544 578888888775 2334444444444333322221 12233444444
Q ss_pred c--CCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCC
Q 002155 257 A--QLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP 334 (959)
Q Consensus 257 ~--~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~ 334 (959)
. +|+.|++++|.+++..+. .+..+++|+.|++++|.++ .+|..+..+++|+.|++++|++++..|
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~------------~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~ 318 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSN------------TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQ 318 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTT------------TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGG
T ss_pred hcCceeEEEeecCccCccCHH------------HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCch
Confidence 4 677777777777643221 2344566777777777777 667778888888888888888887777
Q ss_pred ccccCCCCCCEEEccCCCCCCCCC-CCcCCCCcceEEEeeCcccCCcc--ccccccCCCCcEEEccCCcCCCCCCCccCC
Q 002155 335 GSLSRLTNLTTLDLSRNQLTGPIP-SEFGDSIKLQGLYLGNNQLTGSI--PWSLGSLGGLVKLNLTGNKLSGKVPTSFGN 411 (959)
Q Consensus 335 ~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 411 (959)
..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+++.. +..+..+++|++|++++|++.+..|..|..
T Consensus 319 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 398 (606)
T 3t6q_A 319 ISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKE 398 (606)
T ss_dssp GCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTT
T ss_pred hhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcC
Confidence 788888888888888888774443 45778888888888888887655 667888888888888888888777888888
Q ss_pred cccccccccCCccccCCCch-hhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCC---CCCccccCcc
Q 002155 412 LKELTHLDLSFNELDGQLPS-SLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDG---GLPRSLGNLS 487 (959)
Q Consensus 412 l~~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~---~~p~~~~~l~ 487 (959)
+++|++|++++|++++..+. .+..+++|+.|++++|++++.++..|.... +++.|++++|.+++ ..+..+..++
T Consensus 399 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~L~~n~l~~~~~~~~~~~~~l~ 476 (606)
T 3t6q_A 399 CPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLP--ALQHLNLQGNHFPKGNIQKTNSLQTLG 476 (606)
T ss_dssp CTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCT--TCCEEECTTCBCGGGEECSSCGGGGCT
T ss_pred CccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCC--CCCEEECCCCCCCccccccchhhccCC
Confidence 88888888888888766543 478888888888888888887777776655 78888888888876 2346789999
Q ss_pred ccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCcccccc
Q 002155 488 YLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLT 566 (959)
Q Consensus 488 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~ 566 (959)
+|++|+|++|++++..|..++.+++|++|+|++|++++..|..+..++.| +|++++|++++.+|.. ..+.+|+.+++.
T Consensus 477 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 555 (606)
T 3t6q_A 477 RLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLR 555 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECT
T ss_pred CccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCC
Confidence 99999999999998889999999999999999999999999999999999 9999999999998875 557889999999
Q ss_pred CCCCCCCC
Q 002155 567 GNKDLCGK 574 (959)
Q Consensus 567 ~N~~~c~~ 574 (959)
+|||.|+|
T Consensus 556 ~N~~~c~c 563 (606)
T 3t6q_A 556 QNPLDCTC 563 (606)
T ss_dssp TCCEECSG
T ss_pred CCCccccC
Confidence 99999954
No 6
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.2e-55 Score=530.50 Aligned_cols=528 Identities=20% Similarity=0.164 Sum_probs=433.9
Q ss_pred hhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccc
Q 002155 23 FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLL 102 (959)
Q Consensus 23 ~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l 102 (959)
.++-.++-.+.+|..+. +.+++|+|++|++.+..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 15 ~~~c~~~~l~~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 15 TYQCMDQKLSKVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp EEECTTSCCSSCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred ceEccCCCcccCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 34555556667887665 6788888888888877777888888888888888888877788888888888888888888
Q ss_pred cccCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCcccc-ccCcccccccceeEEEccccccccccCcc
Q 002155 103 TGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTG-IIPVSIWNSETLMEFSAANNLLEGSLPYE 180 (959)
Q Consensus 103 ~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~-~~p~~~~~~~~L~~L~l~~n~l~~~~~~~ 180 (959)
++..|..|+++++|++|++++|.+.+..|..+..+ +|++|++++|++++ .+|..+.++++|++|++++|.+++..|..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 88888888888888888888888887777777766 48888888888876 45888888888888888888888777777
Q ss_pred ccCCcCCc----eEeccCCcccccCCccccCCCCCCEEEccCCcCC-ccCCccccCCCCCCEEEcccccCCC------CC
Q 002155 181 VGNAAALE----RLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD-GIIPYELGDCISLTTLDLGNNNLSG------LI 249 (959)
Q Consensus 181 ~~~l~~L~----~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~------~~ 249 (959)
|+.+++|+ +|++++|.+++..+..+... +|+.|++++|.+. ...|..+.++++|+.+++..+.+.. ..
T Consensus 173 ~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~ 251 (606)
T 3vq2_A 173 LQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFE 251 (606)
T ss_dssp THHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCC
T ss_pred hhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccC
Confidence 87777765 78888888886555555554 7888888888876 4567778888888888876554432 22
Q ss_pred chhhhccc--CCCeeEc-ccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccC
Q 002155 250 PEKIADLA--QLQCLVL-SHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNN 326 (959)
Q Consensus 250 ~~~~~~l~--~L~~L~L-s~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~ 326 (959)
+..+..+. +++.+++ ..|.+.+.+ +.+..+.+++.+++++|.+. .+| .+..+++|+.|++.+
T Consensus 252 ~~~~~~l~~l~l~~l~l~~~~~~~~~~-------------~~~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~ 316 (606)
T 3vq2_A 252 PSIMEGLCDVTIDEFRLTYTNDFSDDI-------------VKFHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIR 316 (606)
T ss_dssp GGGGTTGGGSEEEEEEECCCTTCCGGG-------------GSCGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEES
T ss_pred hHHhhhhhhccHhheeccccccccccc-------------cccccCCCCCEEEecCccch-hhh-hccccccCCEEEccc
Confidence 33333333 3445555 455554332 23667788899999999997 455 888999999999999
Q ss_pred CcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCcc--ccccccCCCCcEEEccCCcCCCC
Q 002155 327 NMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI--PWSLGSLGGLVKLNLTGNKLSGK 404 (959)
Q Consensus 327 n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~i~~~ 404 (959)
|.++ .+| .+ .+++|++|++++|+..+. ..+..+++|+.|++++|.+++.. +..+..+++|++|++++|.+++
T Consensus 317 n~l~-~lp-~~-~l~~L~~L~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~- 390 (606)
T 3vq2_A 317 CQLK-QFP-TL-DLPFLKSLTLTMNKGSIS--FKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII- 390 (606)
T ss_dssp CCCS-SCC-CC-CCSSCCEEEEESCSSCEE--CCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-
T ss_pred ccCc-ccc-cC-CCCccceeeccCCcCccc--hhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-
Confidence 9994 666 45 999999999999965533 36778999999999999998653 7888999999999999999985
Q ss_pred CCCccCCcccccccccCCccccCCCc-hhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCC-CCCcc
Q 002155 405 VPTSFGNLKELTHLDLSFNELDGQLP-SSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDG-GLPRS 482 (959)
Q Consensus 405 ~~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~-~~p~~ 482 (959)
.|..|.++++|++|++++|++.+..| ..+..+++|+.|++++|++++..+..|.... +++.|++++|.+++ .+|..
T Consensus 391 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~ 468 (606)
T 3vq2_A 391 MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLT--SLNTLKMAGNSFKDNTLSNV 468 (606)
T ss_dssp ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCT--TCCEEECTTCEEGGGEECSC
T ss_pred chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCC--CCCEEECCCCcCCCcchHHh
Confidence 66889999999999999999998777 6899999999999999999998888777665 89999999999998 48999
Q ss_pred ccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccC-CCc
Q 002155 483 LGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQ-NLS 561 (959)
Q Consensus 483 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-~l~ 561 (959)
|..+++|+.|+|++|++++..|..+..+++|++|+|++|++++..|..+..+++|++|++++|+++++++....+. +|+
T Consensus 469 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~ 548 (606)
T 3vq2_A 469 FANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLA 548 (606)
T ss_dssp CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCC
T ss_pred hccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCc
Confidence 9999999999999999999889999999999999999999999889999999999999999999998888766665 599
Q ss_pred cccccCCCCCCCCCC
Q 002155 562 KISLTGNKDLCGKII 576 (959)
Q Consensus 562 ~l~l~~N~~~c~~~~ 576 (959)
.+++.+|||.|+|++
T Consensus 549 ~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 549 FFNLTNNSVACICEH 563 (606)
T ss_dssp EEECCSCCCCCSSTT
T ss_pred EEEccCCCcccCCcc
Confidence 999999999997643
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=9.5e-55 Score=539.74 Aligned_cols=518 Identities=21% Similarity=0.205 Sum_probs=420.6
Q ss_pred CcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCC-CcccCCCCCCcEEEccCccccccCC
Q 002155 29 QLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSI-PRELCTSESLEEIDLDGNLLTGTIE 107 (959)
Q Consensus 29 ~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~~ 107 (959)
+-.+.+|. -.+.+++|+|++|++.+..|..|.++++|++|+|++|...+.+ |.+|.++++|++|+|++|.+++..|
T Consensus 14 ~~L~~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 14 CNLTQVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCSSCCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 33446776 3467888888888888777888888888888888888554444 7778888888888888888888888
Q ss_pred cccccCCCCceeeecccccccccCcc--cCCC-cccEEeccCCccccccC-cccccccceeEEEccccccccccCccccC
Q 002155 108 GVFEKCSNLSQLVIFRNHIYGSIPEY--LSKL-PLMVLDLDSNNFTGIIP-VSIWNSETLMEFSAANNLLEGSLPYEVGN 183 (959)
Q Consensus 108 ~~~~~l~~L~~L~L~~n~~~~~~p~~--~~~~-~L~~L~ls~n~l~~~~p-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 183 (959)
..|.++++|++|+|++|.+.+..|.. +..+ +|++|++++|++++..+ ..|.++++|++|++++|.+++..+..+..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 88888888888888888888755543 5555 58888888888887655 46888888888888888888888888887
Q ss_pred C--cCCceEeccCCcccccCCccccCCCC------CCEEEccCCcCCccCCccccCC---CCCCEEEccc---------c
Q 002155 184 A--AALERLVLTNNMLKGHLPKEIGNLSA------LSVLDLNSNLFDGIIPYELGDC---ISLTTLDLGN---------N 243 (959)
Q Consensus 184 l--~~L~~L~L~~n~i~~~~~~~~~~l~~------L~~L~L~~N~i~~~~~~~~~~l---~~L~~L~L~~---------N 243 (959)
+ ++|+.|+|++|.+.+..|..+..+.+ |+.|++++|.+++..+..+... .+++.|.+++ +
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 7 88888888888888877777766665 8888888888887777766543 5677787763 3
Q ss_pred cCCCCCchhhhcc--cCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccE
Q 002155 244 NLSGLIPEKIADL--AQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVD 321 (959)
Q Consensus 244 ~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~ 321 (959)
.+.......|..+ ++|+.|+|++|.+.+..|. .+..+++|+.|++++|.+++..|..|..+++|+.
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~------------~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 318 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSR------------VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQV 318 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSC------------CSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCE
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChh------------hhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCE
Confidence 4444445556655 6789999999888743332 3455677888999999998888889999999999
Q ss_pred EEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcC
Q 002155 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401 (959)
Q Consensus 322 L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i 401 (959)
|++++|.+++..+..|..+++|++|++++|.+....+..|..+++|+.|++++|.+++. ..+++|+.|++++|++
T Consensus 319 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l 393 (844)
T 3j0a_A 319 LNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKL 393 (844)
T ss_dssp EEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCC
T ss_pred EECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCc
Confidence 99999999988899999999999999999999988888899999999999999999842 3378899999999999
Q ss_pred CCCCCCccCCcccccccccCCccccCCC-chhhhcccccceEeeccccccCCccc-cccchhhhhhceeccCCcccC---
Q 002155 402 SGKVPTSFGNLKELTHLDLSFNELDGQL-PSSLSNILNLVGLYLQHNKLSGPVDE-LFSNSAAWKIATMNMSNNLFD--- 476 (959)
Q Consensus 402 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~~~~~~l~~L~ls~N~l~--- 476 (959)
+ .+|.. ..+++.|++++|++++.. +..+..+++|+.|++++|++++.+.. .+.. ..+++.|++++|.++
T Consensus 394 ~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~--~~~L~~L~Ls~N~l~~~~ 467 (844)
T 3j0a_A 394 V-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSE--NPSLEQLFLGENMLQLAW 467 (844)
T ss_dssp C-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCS--CTTCCBCEEESCCCSSSC
T ss_pred c-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccccccccc--CCccccccCCCCcccccc
Confidence 8 44543 457899999999998643 23466899999999999999877654 2333 237899999999997
Q ss_pred --CCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC
Q 002155 477 --GGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS 554 (959)
Q Consensus 477 --~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 554 (959)
+..+..|.++++|+.|+|++|++++..|..|..+++|++|+|++|+|++..|..+. ++|+.|++++|+|++.+|..
T Consensus 468 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~ 545 (844)
T 3j0a_A 468 ETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV 545 (844)
T ss_dssp CSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC
T ss_pred ccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH
Confidence 45567789999999999999999988888999999999999999999987777776 89999999999999999865
Q ss_pred cccCCCccccccCCCCCCCCCC
Q 002155 555 GICQNLSKISLTGNKDLCGKII 576 (959)
Q Consensus 555 ~~~~~l~~l~l~~N~~~c~~~~ 576 (959)
+.+++.+++.+|||.|+|.+
T Consensus 546 --~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 546 --FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp --CSSCCEEEEEEECCCCSSSC
T ss_pred --hCCcCEEEecCCCccccccc
Confidence 56899999999999998865
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2e-55 Score=528.48 Aligned_cols=529 Identities=19% Similarity=0.183 Sum_probs=450.0
Q ss_pred ccccCCCCCcCccccCccchhhhhhc-CCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCC
Q 002155 2 LSFNALSGSLPEELSDLPILTFAAEK-NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSG 80 (959)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 80 (959)
.+..+++ .+|+.+.. .++.++.. |++.+..|.+|+++++|++|+|++|++.+..|..|+++++|++|+|++|++++
T Consensus 19 c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~ 95 (606)
T 3t6q_A 19 CENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIF 95 (606)
T ss_dssp CTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSE
T ss_pred CCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccc
Confidence 3567788 88987764 34444444 56666668899999999999999999998889999999999999999999998
Q ss_pred CCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccc-cCcccCCCcccEEeccCCccccccCccccc
Q 002155 81 SIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGS-IPEYLSKLPLMVLDLDSNNFTGIIPVSIWN 159 (959)
Q Consensus 81 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~-~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~ 159 (959)
..|..|.++++|++|++++|++++..+..|.++++|++|++++|.+.+. .|..+...+|++|++++|++++..|..+..
T Consensus 96 ~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 175 (606)
T 3t6q_A 96 MAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSS 175 (606)
T ss_dssp ECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHT
T ss_pred cChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhh
Confidence 8899999999999999999999998889999999999999999999974 466666557999999999999998999999
Q ss_pred cccee--EEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCC-----ccCCccccCC
Q 002155 160 SETLM--EFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD-----GIIPYELGDC 232 (959)
Q Consensus 160 ~~~L~--~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~-----~~~~~~~~~l 232 (959)
+++|+ +|++++|.+++..|..|.. .+|++|++++|.. .+..+..+.+++...+.-+.+. .+.+..+..+
T Consensus 176 l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~---~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 176 LQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQN---LLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp TTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSC---HHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hcccceeEEecCCCccCccChhHhhh-ccccccccCCchh---HHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 99999 9999999999877776655 6899999999972 3455666666555444433222 2333444444
Q ss_pred C--CCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCC
Q 002155 233 I--SLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIP 310 (959)
Q Consensus 233 ~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p 310 (959)
. +|++|++++|+++++.+..|..+++|++|++++|.++ .+|. .+..+++|+.|++++|.+.+..|
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~------------~l~~l~~L~~L~l~~n~l~~~~~ 318 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPS------------GLVGLSTLKKLVLSANKFENLCQ 318 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCS------------SCCSCTTCCEEECTTCCCSBGGG
T ss_pred hcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCCh------------hhcccccCCEEECccCCcCcCch
Confidence 3 6889999999998888888999999999999999887 2332 24456778889999999988888
Q ss_pred cccCCcccccEEEccCCcCcccCC-ccccCCCCCCEEEccCCCCCCCC--CCCcCCCCcceEEEeeCcccCCcccccccc
Q 002155 311 EELGSCVVVVDLLLNNNMLSGKIP-GSLSRLTNLTTLDLSRNQLTGPI--PSEFGDSIKLQGLYLGNNQLTGSIPWSLGS 387 (959)
Q Consensus 311 ~~~~~~~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 387 (959)
..+..+++|+.|++++|.+.+..+ ..|..+++|++|++++|.+.+.. +..+..+++|+.|++++|.+.+..|..+..
T Consensus 319 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 398 (606)
T 3t6q_A 319 ISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKE 398 (606)
T ss_dssp GCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTT
T ss_pred hhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcC
Confidence 899999999999999999885544 56899999999999999998765 778899999999999999999888889999
Q ss_pred CCCCcEEEccCCcCCCCCCC-ccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCc---cccccchhhh
Q 002155 388 LGGLVKLNLTGNKLSGKVPT-SFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPV---DELFSNSAAW 463 (959)
Q Consensus 388 l~~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~---~~~~~~~~~~ 463 (959)
+++|++|++++|++.+..+. .|.++++|++|++++|.+++..|..+..+++|+.|++++|++++.. +..|....
T Consensus 399 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~-- 476 (606)
T 3t6q_A 399 CPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLG-- 476 (606)
T ss_dssp CTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCT--
T ss_pred CccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCC--
Confidence 99999999999999877654 4889999999999999999888899999999999999999998632 23454444
Q ss_pred hhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecc
Q 002155 464 KIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLA 543 (959)
Q Consensus 464 ~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 543 (959)
+++.|++++|.+++..|..|.++++|+.|+|++|++++..|..+..++.| +|++++|++++..|..+..+++|+.|+++
T Consensus 477 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 555 (606)
T 3t6q_A 477 RLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLR 555 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECT
T ss_pred CccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCC
Confidence 79999999999999899999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred cCcCcccCCC
Q 002155 544 ENRLEGMVPR 553 (959)
Q Consensus 544 ~N~l~~~~~~ 553 (959)
+|++.+..+.
T Consensus 556 ~N~~~c~c~~ 565 (606)
T 3t6q_A 556 QNPLDCTCSN 565 (606)
T ss_dssp TCCEECSGGG
T ss_pred CCCccccCCc
Confidence 9999987654
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.1e-54 Score=517.11 Aligned_cols=525 Identities=19% Similarity=0.184 Sum_probs=450.0
Q ss_pred ccccCCCCCcCccccCccchhhhhhc-CCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCC
Q 002155 2 LSFNALSGSLPEELSDLPILTFAAEK-NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSG 80 (959)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 80 (959)
.+.++++ .+|+.+. +.++.++.. |++.+..|..|+++++|++|+|++|++.+..|..|+++++|++|+|++|++++
T Consensus 18 c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~ 94 (606)
T 3vq2_A 18 CMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQS 94 (606)
T ss_dssp CTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCC
T ss_pred ccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccc
Confidence 4778999 9999876 556555555 55555556699999999999999999998888899999999999999999998
Q ss_pred CCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccccccc-ccCcccCCC-cccEEeccCCccccccCcccc
Q 002155 81 SIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYG-SIPEYLSKL-PLMVLDLDSNNFTGIIPVSIW 158 (959)
Q Consensus 81 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~-~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~ 158 (959)
..|.+|+++++|++|++++|++++..+..|+++++|++|++++|.+.+ .+|..+..+ +|++|++++|++++..|..+.
T Consensus 95 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 174 (606)
T 3vq2_A 95 FSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQ 174 (606)
T ss_dssp CCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTH
T ss_pred cChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhh
Confidence 889999999999999999999999888999999999999999999986 568888777 599999999999999999898
Q ss_pred ccccee----EEEccccccccccCccccCCcCCceEeccCCccc-ccCCccccCCCCCCEEEccCCcCCc------cCCc
Q 002155 159 NSETLM----EFSAANNLLEGSLPYEVGNAAALERLVLTNNMLK-GHLPKEIGNLSALSVLDLNSNLFDG------IIPY 227 (959)
Q Consensus 159 ~~~~L~----~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~N~i~~------~~~~ 227 (959)
.+.+|+ +|++++|.+++..+..+... +|++|++++|.++ +..|..+.++++|+.+++..+.+.. ..+.
T Consensus 175 ~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~ 253 (606)
T 3vq2_A 175 FLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPS 253 (606)
T ss_dssp HHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGG
T ss_pred hhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChH
Confidence 888765 89999999996666666555 9999999999997 4678889999999999987655432 2222
Q ss_pred cccCCC--CCCEEEc-ccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCc
Q 002155 228 ELGDCI--SLTTLDL-GNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNR 304 (959)
Q Consensus 228 ~~~~l~--~L~~L~L-~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~ 304 (959)
.+..+. +++.+++ ..|.+.+..|. +..+++|+.|++++|.+.. ++.+..+.+|+.|++++|.
T Consensus 254 ~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~--------------l~~l~~~~~L~~L~l~~n~ 318 (606)
T 3vq2_A 254 IMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY--------------LEDVPKHFKWQSLSIIRCQ 318 (606)
T ss_dssp GGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC--------------CCCCCTTCCCSEEEEESCC
T ss_pred HhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh--------------hhhccccccCCEEEccccc
Confidence 233332 4667777 67788877776 8999999999999998852 3345567788899999999
Q ss_pred CCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCC--CCCCcCCCCcceEEEeeCcccCCccc
Q 002155 305 LSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP--IPSEFGDSIKLQGLYLGNNQLTGSIP 382 (959)
Q Consensus 305 l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~ 382 (959)
+ +.+| .+ .+++|+.|++++|...+.. .+..+++|++|++++|++++. .+..+..+++|+.|++++|.++ .+|
T Consensus 319 l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~ 392 (606)
T 3vq2_A 319 L-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMS 392 (606)
T ss_dssp C-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EEC
T ss_pred C-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cch
Confidence 9 5777 45 8999999999999655433 677899999999999999865 3778889999999999999998 466
Q ss_pred cccccCCCCcEEEccCCcCCCCCC-CccCCcccccccccCCccccCCCchhhhcccccceEeeccccccC-Cccccccch
Q 002155 383 WSLGSLGGLVKLNLTGNKLSGKVP-TSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSG-PVDELFSNS 460 (959)
Q Consensus 383 ~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~~ 460 (959)
..+..+++|++|++++|++.+..+ ..|.++++|++|++++|++++..|..+..+++|+.|++++|++++ +.+..|...
T Consensus 393 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 472 (606)
T 3vq2_A 393 ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANT 472 (606)
T ss_dssp CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC
T ss_pred hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccC
Confidence 889999999999999999998777 689999999999999999998889999999999999999999987 466667665
Q ss_pred hhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCC-CccE
Q 002155 461 AAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLS-NLLY 539 (959)
Q Consensus 461 ~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~ 539 (959)
. +++.|++++|.+++..|..|.++++|++|+|++|++++.+|..+..+++|++|+|++|+|+ .+|..+..++ +|++
T Consensus 473 ~--~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~ 549 (606)
T 3vq2_A 473 T--NLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAF 549 (606)
T ss_dssp T--TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCE
T ss_pred C--CCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcE
Confidence 5 8999999999999999999999999999999999999888999999999999999999999 5777799997 5999
Q ss_pred EecccCcCcccCCCC
Q 002155 540 LSLAENRLEGMVPRS 554 (959)
Q Consensus 540 L~l~~N~l~~~~~~~ 554 (959)
|++++|++.+..+..
T Consensus 550 l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 550 FNLTNNSVACICEHQ 564 (606)
T ss_dssp EECCSCCCCCSSTTH
T ss_pred EEccCCCcccCCccH
Confidence 999999999877654
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=9.4e-53 Score=521.85 Aligned_cols=521 Identities=22% Similarity=0.193 Sum_probs=444.1
Q ss_pred ccccCCCCCcCccccCccchhhhhh-cCCcccCCCcccCCCccccEEecCCCcccccC-CcCccCCCCCcEEEcCCCcCC
Q 002155 2 LSFNALSGSLPEELSDLPILTFAAE-KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKI-PPEIGNCSMLKSISLSNNFLS 79 (959)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~ 79 (959)
.|+++++ .+|. ..+.++.++. +|++.+..|..|+++++|++|+|++|...+.+ |..|+++++|++|+|++|.++
T Consensus 11 cs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~ 86 (844)
T 3j0a_A 11 YRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIY 86 (844)
T ss_dssp ESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCC
T ss_pred ccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCc
Confidence 4788999 9998 3455655554 46666777899999999999999999776666 788999999999999999999
Q ss_pred CCCCcccCCCCCCcEEEccCccccccCCc--ccccCCCCceeeecccccccccC-cccCCC-cccEEeccCCccccccCc
Q 002155 80 GSIPRELCTSESLEEIDLDGNLLTGTIEG--VFEKCSNLSQLVIFRNHIYGSIP-EYLSKL-PLMVLDLDSNNFTGIIPV 155 (959)
Q Consensus 80 ~~~p~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~~~~~~p-~~~~~~-~L~~L~ls~n~l~~~~p~ 155 (959)
+..|..|..+++|++|+|++|.+++..+. .|.++++|++|+|++|.+.+..+ ..+..+ +|++|++++|++++..|.
T Consensus 87 ~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 87 FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp EECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred ccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 88899999999999999999999986554 49999999999999999988765 466666 599999999999999999
Q ss_pred ccccc--cceeEEEccccccccccCccccCCcC------CceEeccCCcccccCCccccCC---CCCCEEEccC------
Q 002155 156 SIWNS--ETLMEFSAANNLLEGSLPYEVGNAAA------LERLVLTNNMLKGHLPKEIGNL---SALSVLDLNS------ 218 (959)
Q Consensus 156 ~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~------L~~L~L~~n~i~~~~~~~~~~l---~~L~~L~L~~------ 218 (959)
.+..+ ++|+.|++++|.+.+..|..++.+.+ |+.|+|++|.+++..+..+... .+++.|.++.
T Consensus 167 ~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~ 246 (844)
T 3j0a_A 167 ELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAG 246 (844)
T ss_dssp GGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCS
T ss_pred HcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccc
Confidence 99888 89999999999999988888887776 9999999999998888877654 6788888873
Q ss_pred ---CcCCccCCccccCC--CCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccc
Q 002155 219 ---NLFDGIIPYELGDC--ISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293 (959)
Q Consensus 219 ---N~i~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~ 293 (959)
|.+....+..|.++ ++|++|+|++|.+.+..+..|..+++|+.|+|++|++++..|. .+..++
T Consensus 247 ~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~------------~~~~l~ 314 (844)
T 3j0a_A 247 FGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADE------------AFYGLD 314 (844)
T ss_dssp SSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTT------------TTTTCS
T ss_pred ccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChH------------HhcCCC
Confidence 34444445556665 6899999999999988899999999999999999999854442 345677
Q ss_pred cccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEee
Q 002155 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLG 373 (959)
Q Consensus 294 ~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 373 (959)
+|+.|++++|.+++..|..+..+++|+.|++++|+++...+..|..+++|++|++++|.+++. ..+++|+.|+++
T Consensus 315 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~ 389 (844)
T 3j0a_A 315 NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLS 389 (844)
T ss_dssp SCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEE
T ss_pred CCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccC
Confidence 899999999999999999999999999999999999999999999999999999999999853 237899999999
Q ss_pred CcccCCccccccccCCCCcEEEccCCcCCCCCC-CccCCcccccccccCCccccCCCch-hhhcccccceEeeccccccC
Q 002155 374 NNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVP-TSFGNLKELTHLDLSFNELDGQLPS-SLSNILNLVGLYLQHNKLSG 451 (959)
Q Consensus 374 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~l~~ 451 (959)
+|+++ .+|.. ..+++.|++++|++++... ..+.++++|++|+|++|++++..+. .+..+++|+.|++++|.++.
T Consensus 390 ~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~ 465 (844)
T 3j0a_A 390 GNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQL 465 (844)
T ss_dssp SCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSS
T ss_pred CCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcccc
Confidence 99998 45543 4679999999999996532 2356899999999999999865443 46678999999999999974
Q ss_pred C-----ccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCC
Q 002155 452 P-----VDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQ 526 (959)
Q Consensus 452 ~-----~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 526 (959)
. .+..|..+. +++.|+|++|.+++..|..|.++++|+.|+|++|++++..|..+. ++|++|+|++|+|++.
T Consensus 466 ~~~~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~ 541 (844)
T 3j0a_A 466 AWETELCWDVFEGLS--HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAP 541 (844)
T ss_dssp SCCSCCCSSCSSCBC--CEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCC
T ss_pred ccccccchhhhcCcc--cccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCC
Confidence 4 345566554 799999999999999999999999999999999999976666665 8999999999999999
Q ss_pred CCccccCCCCccEEecccCcCcccCCCC
Q 002155 527 IPETMCSLSNLLYLSLAENRLEGMVPRS 554 (959)
Q Consensus 527 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 554 (959)
.|..| .+|+.|++++|++.+..+..
T Consensus 542 ~~~~~---~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 542 NPDVF---VSLSVLDITHNKFICECELS 566 (844)
T ss_dssp CSCCC---SSCCEEEEEEECCCCSSSCC
T ss_pred ChhHh---CCcCEEEecCCCcccccccH
Confidence 88775 47899999999999876643
No 11
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-50 Score=481.36 Aligned_cols=511 Identities=24% Similarity=0.244 Sum_probs=382.3
Q ss_pred EEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccc
Q 002155 46 SLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNH 125 (959)
Q Consensus 46 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 125 (959)
.++-++.++. .+|..+. +++++|+|++|++++..+.+|.++++|++|+|++|+++++.++.|.++++|++|+|++|.
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 87 (570)
T 2z63_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (570)
T ss_dssp EEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCc
Confidence 3444444444 4454332 345555555555555445555555556666666555555555555555666666666655
Q ss_pred cccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEcccccccc-ccCccccCCcCCceEeccCCcccccCCc
Q 002155 126 IYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG-SLPYEVGNAAALERLVLTNNMLKGHLPK 203 (959)
Q Consensus 126 ~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 203 (959)
+.+..|..+..+ +|++|++++|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|++++..+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~ 167 (570)
T 2z63_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (570)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGG
T ss_pred CCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHH
Confidence 555555555544 36666666666665555566777777777777777765 3577788888888888888888877777
Q ss_pred cccCCCCC----CEEEccCCcCCccCCccccCCCCCCEEEcccccCC-CCCchhhhcccCCCeeEcccccCCCCCCCCCc
Q 002155 204 EIGNLSAL----SVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLS-GLIPEKIADLAQLQCLVLSHNNLSGPIPSKPS 278 (959)
Q Consensus 204 ~~~~l~~L----~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 278 (959)
.++.+++| +.|++++|.++++.|..+..+ +|++|++++|... ...+..+..+++++.+.+..+.+..... .
T Consensus 168 ~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~--l- 243 (570)
T 2z63_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN--L- 243 (570)
T ss_dssp GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSS--C-
T ss_pred HccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchh--h-
Confidence 77777777 788888888887777777665 6888888887543 2345667777777777766544331100 0
Q ss_pred chhhccCCCCccccccccceecCCC-cCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCC
Q 002155 279 SYFRQANMPDLSFIQHHGVFDLSYN-RLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPI 357 (959)
Q Consensus 279 ~~~~~~~~~~l~~l~~L~~l~L~~n-~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 357 (959)
..+....+..+..+ .+..++++++ .+.+..|..+..+++|+.|++.+|.++ .+|..+..+ +|++|++++|.+.. .
T Consensus 244 ~~~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~-l 319 (570)
T 2z63_A 244 EKFDKSALEGLCNL-TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQ-F 319 (570)
T ss_dssp EECCTTTTGGGGGS-EEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSS-C
T ss_pred hhcchhhhcccccc-chhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccc-c
Confidence 00000111112222 2455777777 777888999999999999999999998 577788888 99999999999984 4
Q ss_pred CCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCC--CCccCCcccccccccCCccccCCCchhhhc
Q 002155 358 PSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKV--PTSFGNLKELTHLDLSFNELDGQLPSSLSN 435 (959)
Q Consensus 358 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 435 (959)
|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. +..+.++++|++|++++|.+.+. +..+..
T Consensus 320 ~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~ 394 (570)
T 2z63_A 320 PT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLG 394 (570)
T ss_dssp CB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEET
T ss_pred Cc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccc
Confidence 43 4678999999999998866554 78899999999999998654 67788999999999999999854 444999
Q ss_pred ccccceEeeccccccCCcc-ccccchhhhhhceeccCCcccCCCCCccccCccccceeeecccccc-ccCCcCCcCCCCC
Q 002155 436 ILNLVGLYLQHNKLSGPVD-ELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT-GEIPPDLGNLMQL 513 (959)
Q Consensus 436 l~~L~~L~L~~N~l~~~~~-~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L 513 (959)
+++|+.|++++|++++.++ ..|.... +++.|++++|.+.+..|..|.++++|++|+|++|+++ +.+|..+..+++|
T Consensus 395 l~~L~~L~l~~n~l~~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 472 (570)
T 2z63_A 395 LEQLEHLDFQHSNLKQMSEFSVFLSLR--NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL 472 (570)
T ss_dssp CTTCCEEECTTSEEESCTTSCTTTTCT--TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred cCCCCEEEccCCccccccchhhhhcCC--CCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCC
Confidence 9999999999999988765 4565554 7999999999999999999999999999999999998 5789999999999
Q ss_pred cEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCccccccCCCCCCCC
Q 002155 514 EYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 514 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~~ 574 (959)
++|++++|++++..|..+..+++|++|++++|++++.++.. ..+.+|+.+++.+|++.|+|
T Consensus 473 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 473 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 99999999999988999999999999999999999998864 56889999999999999965
No 12
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.7e-52 Score=446.73 Aligned_cols=259 Identities=27% Similarity=0.473 Sum_probs=213.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56778899999999999999864 477899999987777777889999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhc---------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 753 VYEYMVNGSLDLWLRNRT---------GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
|||||++|+|.++++... .....++|.++..|+.||++||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999998642 22346899999999999999999999 789999999999999999999999
Q ss_pred cccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHH
Q 002155 824 ADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+|||+|+......... .....||++|||||++.+..|+.++|||||||++|||+| |+.||..... ..+..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--------~~~~~ 241 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------NEVIE 241 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHH
Confidence 9999998764433222 233468999999999999999999999999999999999 8999864321 12233
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..+.... .+..++..+.+++.+||+.||++||||+||.+.|+++.
T Consensus 242 ~i~~~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 242 CITQGRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHcCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 333332111 11223456889999999999999999999999999874
No 13
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.5e-51 Score=447.20 Aligned_cols=259 Identities=29% Similarity=0.465 Sum_probs=207.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|.+.++||+|+||+||+|+++ +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45677889999999999999864 478899999987777777889999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCC-----------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcE
Q 002155 753 VYEYMVNGSLDLWLRNRTGS-----------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA 821 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 821 (959)
|||||++|+|.++++..... ..+++|.++..|+.||++||+||| +++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 99999999999999865321 236899999999999999999999 7899999999999999999999
Q ss_pred EEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHH
Q 002155 822 KVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWV 899 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 899 (959)
||+|||+++........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||..... ..+
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--------~~~ 269 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--------TEA 269 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--------HHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--------HHH
Confidence 99999999876433222 2334579999999999999999999999999999999999 8999864321 112
Q ss_pred HHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...+..+.. +.. +..+...+.+++.+||+.||++||||+||+++|+.+.
T Consensus 270 ~~~i~~g~~-----~~~----p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 270 IDCITQGRE-----LER----PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp HHHHHHTCC-----CCC----CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHcCCC-----CCC----cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 233333221 111 1123356889999999999999999999999999874
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.5e-50 Score=476.74 Aligned_cols=505 Identities=19% Similarity=0.169 Sum_probs=409.9
Q ss_pred cCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccC
Q 002155 27 KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTI 106 (959)
Q Consensus 27 ~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 106 (959)
.+.-...+|..+. +.+++|+|++|++.+..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++.+
T Consensus 15 ~~~~l~~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (570)
T 2z63_A 15 MELNFYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92 (570)
T ss_dssp CSSCCSSCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEEC
T ss_pred CCCCccccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccC
Confidence 3444556777654 46889999999998777778999999999999999998777888999999999999999999888
Q ss_pred CcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCccccc-cCcccccccceeEEEccccccccccCccccCC
Q 002155 107 EGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGI-IPVSIWNSETLMEFSAANNLLEGSLPYEVGNA 184 (959)
Q Consensus 107 ~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~-~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 184 (959)
+..|.++++|++|++++|.+.+..+..+..+ +|++|++++|++++. +|..+.++++|++|++++|.+++..+..|+.+
T Consensus 93 ~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 172 (570)
T 2z63_A 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 172 (570)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHH
T ss_pred HhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccch
Confidence 8899999999999999999887766566666 599999999999874 68889999999999999999998888888888
Q ss_pred cCC----ceEeccCCcccccCCccccCCCCCCEEEccCCcCC-ccCCccccCCCCCCEEEcccccC------CCCCchhh
Q 002155 185 AAL----ERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD-GIIPYELGDCISLTTLDLGNNNL------SGLIPEKI 253 (959)
Q Consensus 185 ~~L----~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l------~~~~~~~~ 253 (959)
++| +.|++++|.+++..+..|..+ +|+.|++++|... ...+..+..+++++.+.+..+.+ .......+
T Consensus 173 ~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~ 251 (570)
T 2z63_A 173 HQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSAL 251 (570)
T ss_dssp HTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTT
T ss_pred hccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhh
Confidence 888 899999999998877777766 7999999988543 23455667777777766654322 22223334
Q ss_pred hcccC--CCeeEcccc-cCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCc
Q 002155 254 ADLAQ--LQCLVLSHN-NLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLS 330 (959)
Q Consensus 254 ~~l~~--L~~L~Ls~N-~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~ 330 (959)
..+.+ ++.+++++| .+.+..| ..+..+.+|+.|++++|.+. .+|..+..+ +|+.|++.+|.++
T Consensus 252 ~~l~~l~l~~l~l~~~~~~~~~~~------------~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~ 317 (570)
T 2z63_A 252 EGLCNLTIEEFRLAYLDYYLDDII------------DLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG 317 (570)
T ss_dssp GGGGGSEEEEEEEEETTEEESCST------------TTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS
T ss_pred ccccccchhhhhhhcchhhhhhch------------hhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc
Confidence 44443 455666665 4433322 23455677788888888887 577778888 8999999999988
Q ss_pred ccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCcc--ccccccCCCCcEEEccCCcCCCCCCCc
Q 002155 331 GKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSI--PWSLGSLGGLVKLNLTGNKLSGKVPTS 408 (959)
Q Consensus 331 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~N~i~~~~~~~ 408 (959)
. +|. ..+++|++|++++|.+.+..+. ..+++|+.|++++|.+++.. +..+..+++|++|++++|.+.+..+ .
T Consensus 318 ~-l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~ 391 (570)
T 2z63_A 318 Q-FPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-N 391 (570)
T ss_dssp S-CCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-E
T ss_pred c-cCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-c
Confidence 4 443 4778899999999988865554 67889999999999988554 6778888999999999999885544 4
Q ss_pred cCCcccccccccCCccccCCCc-hhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccC-CCCCccccCc
Q 002155 409 FGNLKELTHLDLSFNELDGQLP-SSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFD-GGLPRSLGNL 486 (959)
Q Consensus 409 ~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~-~~~p~~~~~l 486 (959)
+.++++|++|++++|.+.+..+ ..+..+++|+.|++++|++++..+..|.... .++.|++++|.++ +.+|..|..+
T Consensus 392 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~p~~~~~l 469 (570)
T 2z63_A 392 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS--SLEVLKMAGNSFQENFLPDIFTEL 469 (570)
T ss_dssp EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCT--TCCEEECTTCEEGGGEECSCCTTC
T ss_pred ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCC--cCcEEECcCCcCccccchhhhhcc
Confidence 8889999999999999987655 5788899999999999999888887777665 7889999999987 5789999999
Q ss_pred cccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcc
Q 002155 487 SYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGI 556 (959)
Q Consensus 487 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 556 (959)
++|++|+|++|++++..|..+..+++|++|++++|++++..|..+..+++|+.|++++|++++.+|....
T Consensus 470 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 539 (570)
T 2z63_A 470 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 539 (570)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHH
T ss_pred cCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHH
Confidence 9999999999999988899999999999999999999998888999999999999999999998887543
No 15
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.6e-51 Score=441.08 Aligned_cols=257 Identities=23% Similarity=0.380 Sum_probs=210.3
Q ss_pred CCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++++.+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 4556788999999999999863 46789999997543 3445789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCC------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc
Q 002155 753 VYEYMVNGSLDLWLRNRTGS------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE 820 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 820 (959)
|||||++|+|.+++...... ...++|.++..|+.|||+||+||| +.+||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence 99999999999999764321 235899999999999999999999 889999999999999999999
Q ss_pred EEEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHH
Q 002155 821 AKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGW 898 (959)
Q Consensus 821 ~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 898 (959)
+||+|||+++.....+. .......||++|||||++.++.|+.++|||||||++|||+| |..||..... ..
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--------~~ 255 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--------QD 255 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--------HH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--------HH
Confidence 99999999987654332 22345679999999999999999999999999999999999 8999864321 12
Q ss_pred HHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 899 VFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
+...+..+.... .+.+++..+.+++.+||+.||++||||+||+++|+.+
T Consensus 256 ~~~~i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 256 VVEMIRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 233333332111 1223445688999999999999999999999999875
No 16
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.7e-49 Score=471.11 Aligned_cols=478 Identities=20% Similarity=0.180 Sum_probs=333.8
Q ss_pred cCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccC
Q 002155 27 KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTI 106 (959)
Q Consensus 27 ~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 106 (959)
+++-.+.+|+.+. +.|++|+|++|++.+..|.+|.++++|++|+|++|++++..|..|..+++|++|+|++|++++.+
T Consensus 13 ~~~~l~~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 90 (549)
T 2z81_A 13 RSRSFTSIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLS 90 (549)
T ss_dssp TTSCCSSCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCC
T ss_pred CCCccccccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccC
Confidence 3445557887665 68999999999999878889999999999999999999888889999999999999999999888
Q ss_pred CcccccCCCCceeeecccccccc-cCcccCCC-cccEEeccCCc-cccccCcccccccceeEEEccccccccccCccccC
Q 002155 107 EGVFEKCSNLSQLVIFRNHIYGS-IPEYLSKL-PLMVLDLDSNN-FTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGN 183 (959)
Q Consensus 107 ~~~~~~l~~L~~L~L~~n~~~~~-~p~~~~~~-~L~~L~ls~n~-l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 183 (959)
+..|+++++|++|++++|.+.+. .|..+..+ +|++|++++|+ +..+.+..+.++++|++|++++|.+++..|..++.
T Consensus 91 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 88899999999999999999863 55666666 59999999998 44444568999999999999999999889999999
Q ss_pred CcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccC--C-ccccCCCCCCEEEcccccCCCCCchh----hhcc
Q 002155 184 AAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGII--P-YELGDCISLTTLDLGNNNLSGLIPEK----IADL 256 (959)
Q Consensus 184 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~--~-~~~~~l~~L~~L~L~~N~l~~~~~~~----~~~l 256 (959)
+++|++|++++|.+.......+..+++|++|++++|.+++.. | .....+++|+.|++++|++++..+.. +..+
T Consensus 171 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~ 250 (549)
T 2z81_A 171 IRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYI 250 (549)
T ss_dssp CSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGC
T ss_pred cccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhh
Confidence 999999999999988433333467899999999999998642 2 23345788999999999987654443 4667
Q ss_pred cCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCccc----
Q 002155 257 AQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGK---- 332 (959)
Q Consensus 257 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~---- 332 (959)
++|+.|++++|.+.+...- . ...... +..+.+++.|.+.++.+...
T Consensus 251 ~~L~~l~l~~~~~~~~~~~-~-----~~~~~~------------------------~~~l~~L~~L~l~~~~i~~~~~~~ 300 (549)
T 2z81_A 251 LELSEVEFDDCTLNGLGDF-N-----PSESDV------------------------VSELGKVETVTIRRLHIPQFYLFY 300 (549)
T ss_dssp TTCCEEEEESCEEECCSCC-C-----CCTTTC------------------------CCCCTTCCEEEEESCBCSCGGGSC
T ss_pred ccccccccccccccccccc-c-----ccchhh------------------------hhhhcccccccccccccchhhhcc
Confidence 8899999999987642110 0 001111 22333444444444443321
Q ss_pred -CCccccCCCCCCEEEccCCCCCCCCCCCc-CCCCcceEEEeeCcccCCccc---cccccCCCCcEEEccCCcCCCCCC-
Q 002155 333 -IPGSLSRLTNLTTLDLSRNQLTGPIPSEF-GDSIKLQGLYLGNNQLTGSIP---WSLGSLGGLVKLNLTGNKLSGKVP- 406 (959)
Q Consensus 333 -~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~~N~i~~~~~- 406 (959)
.+..+...++|+.|++++|++. .+|..+ ..+++|+.|++++|++++..| ..+..+++|++|++++|++++..+
T Consensus 301 ~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 379 (549)
T 2z81_A 301 DLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKT 379 (549)
T ss_dssp CCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHH
T ss_pred cchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccc
Confidence 1222344566777777777776 344433 456777777777777765543 235667777777777777764432
Q ss_pred -CccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccC
Q 002155 407 -TSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGN 485 (959)
Q Consensus 407 -~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~ 485 (959)
..+..+++|++|++++|+++ .+|..+..+++|+.|++++|+++.++...+
T Consensus 380 ~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~---------------------------- 430 (549)
T 2z81_A 380 GEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIP---------------------------- 430 (549)
T ss_dssp HHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSC----------------------------
T ss_pred hhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhc----------------------------
Confidence 34667777777777777777 566667777777777777777765443221
Q ss_pred ccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCcccc
Q 002155 486 LSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKIS 564 (959)
Q Consensus 486 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~ 564 (959)
++|++|+|++|++++.+ ..+++|++|+|++|+|+ .+|. ...+++|++|+|++|++++.+|.. ..+.+|+.++
T Consensus 431 -~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 503 (549)
T 2z81_A 431 -QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIW 503 (549)
T ss_dssp -TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEE
T ss_pred -CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEE
Confidence 34555555555555321 34555666666666665 3343 345556666666666666655542 4455666666
Q ss_pred ccCCCCCCC
Q 002155 565 LTGNKDLCG 573 (959)
Q Consensus 565 l~~N~~~c~ 573 (959)
+++|+|.|+
T Consensus 504 l~~N~~~~~ 512 (549)
T 2z81_A 504 LHTNPWDCS 512 (549)
T ss_dssp CCSSCBCCC
T ss_pred ecCCCccCC
Confidence 666666664
No 17
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-50 Score=432.70 Aligned_cols=258 Identities=29% Similarity=0.458 Sum_probs=203.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.++||+|+||+||+|+++ ..||||+++.. .....+.|.+|++++++++|||||++++++.. +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 46777889999999999999975 36999998643 34456779999999999999999999998864 578999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
|++|+|.++++... ..+++.++..|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~~---~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 113 CEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred CCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 99999999997654 35899999999999999999999 7899999999999999999999999999998764322
Q ss_pred -ccccccccccccccCCCcCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 837 -THVSTDIAGTFGYIPPEYGQS---GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 837 -~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.......+||+.|||||++.+ .+|+.++|||||||++|||+||+.||..... ...+...+..+..
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~-------~~~~~~~~~~~~~---- 255 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-------RDQIIFMVGRGYA---- 255 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHHHHHTTCC----
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh-------HHHHHHHHhcCCC----
Confidence 223345689999999998753 4689999999999999999999999964321 1122223322211
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.|. .+....++...+.+++.+||+.||++||||+||+++|+.++
T Consensus 256 ~p~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 256 SPD-LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp CCC-STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred CCC-cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 111 11122334457889999999999999999999999999875
No 18
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.9e-50 Score=436.94 Aligned_cols=250 Identities=24% Similarity=0.354 Sum_probs=209.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
+.|+..+.||+|+||+||+|+++ +|+.||||++........+.+.+|++++++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56888999999999999999875 69999999997665555667889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+||+|.+++... .+++.++..++.||+.||+||| ++|||||||||+|||++.++++||+|||+|+......
T Consensus 154 ~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 224 (346)
T 4fih_A 154 EGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV- 224 (346)
T ss_dssp TTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-
T ss_pred CCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC-
Confidence 999999999763 3899999999999999999999 8999999999999999999999999999998765422
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......+||+.|||||++.+..|+.++||||+||++|||++|++||..... .. +...+........
T Consensus 225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~-~~~~i~~~~~~~~------ 290 (346)
T 4fih_A 225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LK-AMKMIRDNLPPRL------ 290 (346)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HH-HHHHHHHSSCCCC------
T ss_pred CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HH-HHHHHHcCCCCCC------
Confidence 234557899999999999999999999999999999999999999964311 11 2222222211111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.........+.+++.+||+.||++|||++|++++
T Consensus 291 -~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 291 -KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112234567889999999999999999999874
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.3e-50 Score=436.99 Aligned_cols=251 Identities=24% Similarity=0.405 Sum_probs=202.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||+||+|+++ +|+.||||++... .....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999865 6999999998654 33446678999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
||+||+|.+++..... ..+++.+++.|+.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~--~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKG--VLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 9999999999976542 35788999999999999999999 899999999999999999999999999999876432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.......+||+.|||||++.+..|+.++||||+||++|||+||++||.... ..+.+ ..+..+.. +.
T Consensus 179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-------~~~~~-~~i~~~~~-----~~ 244 (350)
T 4b9d_A 179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-------MKNLV-LKIISGSF-----PP 244 (350)
T ss_dssp -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHH-HHHHHTCC-----CC
T ss_pred -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-------HHHHH-HHHHcCCC-----CC
Confidence 122344679999999999999999999999999999999999999996431 12222 22222211 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ...+...+.+++.+||++||++|||++|++++
T Consensus 245 ~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 245 V----SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C----CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 12233467889999999999999999999864
No 20
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.7e-50 Score=431.56 Aligned_cols=251 Identities=22% Similarity=0.279 Sum_probs=204.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
+.|+..++||+|+||+||+|+++ +|+.||||+++.... ..+|+.+++.++|||||++++++.+++..|+|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 56778889999999999999975 689999999975432 246999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-cEEEccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARLISACE 836 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~~ 836 (959)
+||+|.++++... .+++.++..++.||+.||+||| ++|||||||||+|||++.+| ++||+|||+|+......
T Consensus 133 ~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 133 EGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp TTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred CCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 9999999998764 5899999999999999999999 89999999999999999987 69999999998765322
Q ss_pred cc----ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 837 TH----VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 837 ~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.. .....+||+.|||||++.+..|+.++||||+||++|||+||++||...... .+...+ ......
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~----~~~~~i----~~~~~~--- 274 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG----PLCLKI----ASEPPP--- 274 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS----CCHHHH----HHSCCG---
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----HHHHHH----HcCCCC---
Confidence 11 123357999999999999999999999999999999999999999653222 222222 111110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
....+..+...+.+++.+||++||++|||+.|++++|.+.
T Consensus 275 ----~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 275 ----IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp ----GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 0011122345678899999999999999999999998765
No 21
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.6e-49 Score=438.68 Aligned_cols=250 Identities=24% Similarity=0.354 Sum_probs=209.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
+.|+..+.||+|+||+||+|+++ +|+.||||++........+.+.+|+.+|+.++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999975 69999999997665555667889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+||+|.++++.. .+++.++..|+.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+......
T Consensus 231 ~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~- 301 (423)
T 4fie_A 231 EGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV- 301 (423)
T ss_dssp TTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-
T ss_pred CCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-
Confidence 999999999754 3899999999999999999999 8999999999999999999999999999998765432
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......+||+.|||||++.+..|+.++||||+||++|||++|++||..... .. +...+........
T Consensus 302 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~-~~~~i~~~~~~~~------ 367 (423)
T 4fie_A 302 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LK-AMKMIRDNLPPRL------ 367 (423)
T ss_dssp CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HH-HHHHHHHSCCCCC------
T ss_pred ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HH-HHHHHHcCCCCCC------
Confidence 234567899999999999999999999999999999999999999964321 11 2222222211111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.........+.+++.+||+.||++|||++|++++
T Consensus 368 -~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 368 -KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0111233467889999999999999999999874
No 22
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3e-49 Score=473.99 Aligned_cols=462 Identities=20% Similarity=0.271 Sum_probs=249.4
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCC------C------CCCcccCCCCCCcEEEccCccccccCCccc
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLS------G------SIPRELCTSESLEEIDLDGNLLTGTIEGVF 110 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~------~------~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~ 110 (959)
+++.|+|++|++.|.+|+++++|++|++|+|++|.+. + .+|... +..|+ +++++|.+.+.++..+
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~ 158 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDF 158 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGS
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhH
Confidence 5666777777776677777777777777777776551 1 222222 33444 5555555554444333
Q ss_pred cc-CCCCceeeecccccccccCcccCCCcccE--EeccCCccccccCcccccccceeEEEccccccccc-----------
Q 002155 111 EK-CSNLSQLVIFRNHIYGSIPEYLSKLPLMV--LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGS----------- 176 (959)
Q Consensus 111 ~~-l~~L~~L~L~~n~~~~~~p~~~~~~~L~~--L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~----------- 176 (959)
.. +..+..+++....+.. .....++. +....|++++ +|..++++++|++|++++|.+++.
T Consensus 159 ~~~~~~l~~~~l~~~~~~~-----~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~ 232 (636)
T 4eco_A 159 SDLIKDCINSDPQQKSIKK-----SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENS 232 (636)
T ss_dssp CHHHHHHHHHCTTSCCCCC-----CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred HHHHHHHhhcCcccccccc-----ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccccc
Confidence 31 1112222222111110 00111221 2223567776 677777777777777777777764
Q ss_pred ------cCcccc--CCcCCceEeccCCcccccCCccccCCCCCCEEEccCCc-CCc-cCCccccCC------CCCCEEEc
Q 002155 177 ------LPYEVG--NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNL-FDG-IIPYELGDC------ISLTTLDL 240 (959)
Q Consensus 177 ------~~~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~-i~~-~~~~~~~~l------~~L~~L~L 240 (959)
+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|. +++ .+|..++.+ ++|++|+|
T Consensus 233 ~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L 312 (636)
T 4eco_A 233 EYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYI 312 (636)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEEC
T ss_pred chhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEEC
Confidence 677766 77777777777777777777777777777777777776 666 566666665 67777777
Q ss_pred ccccCCCCCch--hhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCccc
Q 002155 241 GNNNLSGLIPE--KIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV 318 (959)
Q Consensus 241 ~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~ 318 (959)
++|+++ .+|. .|+.+++|++|++++|+++|.+| .+..+.+|+.|++++|.++ .+|..+..+++
T Consensus 313 ~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-------------~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~ 377 (636)
T 4eco_A 313 GYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-------------AFGSEIKLASLNLAYNQIT-EIPANFCGFTE 377 (636)
T ss_dssp CSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-------------CCEEEEEESEEECCSSEEE-ECCTTSEEECT
T ss_pred CCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-------------hhCCCCCCCEEECCCCccc-cccHhhhhhcc
Confidence 777777 4455 67777777777777776654333 1233444444555555544 44444444444
Q ss_pred -ccEEEccCCcCcccCCccccCCC--CCCEEEccCCCCCCCCCCCcC-------CCCcceEEEeeCcccCCccccccccC
Q 002155 319 -VVDLLLNNNMLSGKIPGSLSRLT--NLTTLDLSRNQLTGPIPSEFG-------DSIKLQGLYLGNNQLTGSIPWSLGSL 388 (959)
Q Consensus 319 -L~~L~L~~n~i~~~~~~~~~~l~--~L~~L~Ls~n~l~~~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~~~~~l 388 (959)
|+.|++++|+++ .+|..+..++ +|++|++++|++.+..|..|. .+.+|+.|++++|+++...+..+..+
T Consensus 378 ~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l 456 (636)
T 4eco_A 378 QVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTG 456 (636)
T ss_dssp TCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTT
T ss_pred cCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccC
Confidence 444444444444 3333333322 444444444444444444444 33344444444444442222223334
Q ss_pred CCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccc-cchhhhhhce
Q 002155 389 GGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELF-SNSAAWKIAT 467 (959)
Q Consensus 389 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~~~~~~l~~ 467 (959)
++|++|+|++|+++.+.+..+.... ..+.++++|+.|++++|+++.++..++ .... +|+.
T Consensus 457 ~~L~~L~Ls~N~l~~i~~~~~~~~~-----------------~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~l~--~L~~ 517 (636)
T 4eco_A 457 SPLSSINLMGNMLTEIPKNSLKDEN-----------------ENFKNTYLLTSIDLRFNKLTKLSDDFRATTLP--YLVG 517 (636)
T ss_dssp CCCSEEECCSSCCSBCCSSSSEETT-----------------EECTTGGGCCEEECCSSCCCBCCGGGSTTTCT--TCCE
T ss_pred CCCCEEECCCCCCCCcCHHHhcccc-----------------ccccccCCccEEECcCCcCCccChhhhhccCC--CcCE
Confidence 4444444444444422111221111 000011144444444444444333322 1111 3444
Q ss_pred eccCCcccCCCCCccccCccccceeee------ccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEe
Q 002155 468 MNMSNNLFDGGLPRSLGNLSYLTNLDL------HENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541 (959)
Q Consensus 468 L~ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 541 (959)
|++++|.+++ +|..+.++++|+.|+| ++|++.+.+|..+..+++|++|+|++|+| +.+|..+. ++|+.|+
T Consensus 518 L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~ 593 (636)
T 4eco_A 518 IDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLD 593 (636)
T ss_dssp EECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEE
T ss_pred EECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEE
Confidence 4444444444 5566666777777777 45667777888888888888888888888 45666655 6788888
Q ss_pred cccCcCcccCC
Q 002155 542 LAENRLEGMVP 552 (959)
Q Consensus 542 l~~N~l~~~~~ 552 (959)
+++|++..+..
T Consensus 594 Ls~N~l~~~~~ 604 (636)
T 4eco_A 594 IKDNPNISIDL 604 (636)
T ss_dssp CCSCTTCEEEC
T ss_pred CcCCCCccccH
Confidence 88887776544
No 23
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=9.7e-49 Score=464.65 Aligned_cols=454 Identities=20% Similarity=0.206 Sum_probs=274.5
Q ss_pred EecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccccc
Q 002155 47 LLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHI 126 (959)
Q Consensus 47 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~ 126 (959)
.+.+++++. .+|+.+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..+++|.++++|++|+|++|.+
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 466666666 6666543 6677777777777766666777777777777777777766666777777777776666666
Q ss_pred ccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCc-ccccCCcc
Q 002155 127 YGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNM-LKGHLPKE 204 (959)
Q Consensus 127 ~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~ 204 (959)
.+.+|..+..+ +|++|++++|++++. ..|..|+++++|++|++++|. +....+..
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~-----------------------~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~ 143 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTL-----------------------GVTSLFPNLTNLQTLRIGNVETFSEIRRID 143 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSS-----------------------CSSCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred CccCHHHhccCCCCcEEECCCCccccc-----------------------chhhhhhccCCccEEECCCCccccccCHhh
Confidence 65555444443 355555555555432 233455556666666666665 33233345
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhcc
Q 002155 205 IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQA 284 (959)
Q Consensus 205 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 284 (959)
|.++++|++|++++|.+++..|..++.+++|++|++++|.+.......+..+++|++|++++|++++....
T Consensus 144 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--------- 214 (549)
T 2z81_A 144 FAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFS--------- 214 (549)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCC---------
T ss_pred hhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccccccc---------
Confidence 66666666666666666666666666666666666666666543333334566666666666666532100
Q ss_pred CCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCC----ccccCCCCCCEEEccCCCCCCCC---
Q 002155 285 NMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP----GSLSRLTNLTTLDLSRNQLTGPI--- 357 (959)
Q Consensus 285 ~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~Ls~n~l~~~~--- 357 (959)
..+. ...+++|+.|++.+|.+++..+ ..+..+++|+.|++++|.+.+..
T Consensus 215 ~~~~------------------------~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~ 270 (549)
T 2z81_A 215 PLPV------------------------DEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFN 270 (549)
T ss_dssp CCSS------------------------CCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCC
T ss_pred ccch------------------------hhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccccccc
Confidence 0000 0112233333333333332211 12233445555555555443211
Q ss_pred ---CCCcCCCCcceEEEeeCcccCCc-----cccccccCCCCcEEEccCCcCCCCCCCcc-CCcccccccccCCccccCC
Q 002155 358 ---PSEFGDSIKLQGLYLGNNQLTGS-----IPWSLGSLGGLVKLNLTGNKLSGKVPTSF-GNLKELTHLDLSFNELDGQ 428 (959)
Q Consensus 358 ---~~~~~~l~~L~~L~L~~n~l~~~-----~~~~~~~l~~L~~L~L~~N~i~~~~~~~~-~~l~~L~~L~L~~N~l~~~ 428 (959)
...+..+.+|+.|.+.++.+... .+..+...++|+.|++++|++. .+|..+ .++++|++|++++|++++.
T Consensus 271 ~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~ 349 (549)
T 2z81_A 271 PSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEE 349 (549)
T ss_dssp CCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHH
T ss_pred ccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccc
Confidence 12234455556666655554421 1111233456666666666666 344433 4566666666666666654
Q ss_pred Cch---hhhcccccceEeeccccccCCcc--ccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccC
Q 002155 429 LPS---SLSNILNLVGLYLQHNKLSGPVD--ELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEI 503 (959)
Q Consensus 429 ~~~---~l~~l~~L~~L~L~~N~l~~~~~--~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 503 (959)
.|. .+..+++|+.|++++|+++++++ ..|.... +++.|++++|.++ .+|..+..+++|++|+|++|+++ .+
T Consensus 350 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~--~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l 425 (549)
T 2z81_A 350 YLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLK--NLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VV 425 (549)
T ss_dssp HHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCT--TCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CC
T ss_pred cccchhhhhccccCcEEEccCCcccccccchhhhhcCC--CCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cc
Confidence 432 25566667777777776666543 3343333 5667777777776 56778888999999999999998 56
Q ss_pred CcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCC
Q 002155 504 PPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDL 571 (959)
Q Consensus 504 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 571 (959)
|..+. ++|++|+|++|+|++.+ ..+++|++|++++|+++.+++ ...+.+|+.+++++|...
T Consensus 426 ~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~ip~-~~~l~~L~~L~Ls~N~l~ 486 (549)
T 2z81_A 426 KTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLKTLPD-ASLFPVLLVMKISRNQLK 486 (549)
T ss_dssp CTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSSCCC-GGGCTTCCEEECCSSCCC
T ss_pred cchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccCcCCC-cccCccCCEEecCCCccC
Confidence 65553 68999999999999753 578999999999999996654 567899999999999744
No 24
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-48 Score=415.26 Aligned_cols=245 Identities=27% Similarity=0.412 Sum_probs=197.0
Q ss_pred CCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceec----CCceEEEE
Q 002155 682 CKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF----DEEKLLVY 754 (959)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 754 (959)
++.++||+|+||+||+|++. +++.||+|++... .....+.|.+|++++++++|||||+++++|.. +...|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999875 6889999998643 33445678999999999999999999999854 34579999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEECC-CCcEEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLNE-EFEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~ 831 (959)
|||+||+|.++++... .+++..+..|+.||+.||+||| +++ ||||||||+|||++. ++.+||+|||+|+.
T Consensus 109 Ey~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 9999999999998754 5899999999999999999999 677 999999999999974 78999999999976
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
... ......+||+.|||||++.+ +|+.++|||||||++|||+||++||..... ...+...+..+..
T Consensus 182 ~~~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-------~~~~~~~i~~~~~--- 247 (290)
T 3fpq_A 182 KRA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVTSGVK--- 247 (290)
T ss_dssp CCT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHTTTCC---
T ss_pred CCC---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-------HHHHHHHHHcCCC---
Confidence 432 23345689999999998865 699999999999999999999999954211 1223333333211
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
|...+.. ....+.+++.+||+.||++|||++|++++
T Consensus 248 --~~~~~~~---~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 248 --PASFDKV---AIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --CGGGGGC---CCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --CCCCCcc---CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1111111 12357789999999999999999999874
No 25
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=9.2e-50 Score=425.00 Aligned_cols=247 Identities=26% Similarity=0.362 Sum_probs=207.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.++||+|+||+||+|+.+ +|+.||||++.+. .....+.+.+|++++++++|||||+++++|.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999865 6899999999753 2334567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|||+||+|.++++... .+++.++..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999998764 5899999999999999999999 89999999999999999999999999999987754
Q ss_pred ccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... ......+||+.|||||++.+..|+.++||||+||++|||++|++||..... ..+...+...... .
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~i~~~~~~---~ 253 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--------GLIFAKIIKLEYD---F 253 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCC---C
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCC---C
Confidence 322 234567899999999999999999999999999999999999999964321 1122333322211 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVL 950 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 950 (959)
| ......+.+++.+|+++||++|||++|++
T Consensus 254 p-------~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 P-------EKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp C-------TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred C-------cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1 11234578899999999999999999863
No 26
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.1e-49 Score=426.60 Aligned_cols=269 Identities=27% Similarity=0.350 Sum_probs=203.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCC----ceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE----EKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 754 (959)
.+|.+.++||+|+||+||+|++ +|+.||||++...... ...+..|+..+.+++|||||+++++|.+++ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3567788999999999999998 5899999998754322 222345677778899999999999997654 579999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG-----FTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
|||++|+|.++++.. .++|..+.+++.|+++||+|||+. +.++||||||||+|||++.++++||+|||+|
T Consensus 81 Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp ECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 999999999999864 389999999999999999999932 1239999999999999999999999999999
Q ss_pred cccccccccc---cccccccccccCCCcCCCC------CCCCcCcchhHHHHHHHHHhCCCCCCCCCcccc-------CC
Q 002155 830 RLISACETHV---STDIAGTFGYIPPEYGQSG------RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE-------GG 893 (959)
Q Consensus 830 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-------~~ 893 (959)
+......... ....+||+.|||||++.+. .++.++|||||||++|||+||.+||........ ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 8765433221 2345799999999988654 367799999999999999999988754322110 01
Q ss_pred chHHHHHHHhhcCccccccCccccC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLT-ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.....+...+.. ...+|.... ....+....+.+++.+||+.||++||||+||++.|+++..
T Consensus 236 ~~~~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 236 PSVEEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCHHHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 111222222221 122332221 1234566788999999999999999999999999999864
No 27
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.7e-49 Score=412.51 Aligned_cols=246 Identities=24% Similarity=0.374 Sum_probs=191.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||+||+|+++ +|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999875 69999999986532 333567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+ +|+|.+++.... .+++.++..++.||+.||+||| ++||+||||||+|||++.++++||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~~~----~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHHSC----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 679999997654 5899999999999999999999 89999999999999999999999999999987643
Q ss_pred ccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. ......+||+.|||||++.+..+ +.++||||+||++|||+||+.||.... .. .+.+.+..+... .
T Consensus 165 ~--~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-------~~-~~~~~i~~~~~~---~ 231 (275)
T 3hyh_A 165 G--NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-------IP-VLFKNISNGVYT---L 231 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HH-HHHHHHHHTCCC---C
T ss_pred C--CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-------HH-HHHHHHHcCCCC---C
Confidence 2 23345689999999999988876 579999999999999999999996431 11 222333322111 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
| ......+.+++.+||+.||++|||++|++++
T Consensus 232 p-------~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 232 P-------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp C-------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred C-------CCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1 1123467789999999999999999999874
No 28
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.1e-47 Score=466.49 Aligned_cols=218 Identities=18% Similarity=0.188 Sum_probs=127.0
Q ss_pred ccccEEecCCCcccccCCcCccCCCCCcEEEc-CCCcCCCCCCccc----------------------------------
Q 002155 42 NQMESLLLSSNQFIGKIPPEIGNCSMLKSISL-SNNFLSGSIPREL---------------------------------- 86 (959)
Q Consensus 42 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L-s~n~l~~~~p~~~---------------------------------- 86 (959)
.+++.|+|++|++.|.+|++|++|++|++|+| ++|.++|..|-..
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57889999999999999999999999999999 8888776533211
Q ss_pred -----------------CCCCCCcEEEccC--ccccccCCcccccCCCCceeeecccccccc-cCcccCCCcccEEeccC
Q 002155 87 -----------------CTSESLEEIDLDG--NLLTGTIEGVFEKCSNLSQLVIFRNHIYGS-IPEYLSKLPLMVLDLDS 146 (959)
Q Consensus 87 -----------------~~l~~L~~L~L~~--n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~-~p~~~~~~~L~~L~ls~ 146 (959)
.....++.+.++. |++++ +|..|+++++|++|+|++|.+.+. +|..+. ..+.
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~-------~~s~ 474 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWE-------DANS 474 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS-------CTTS
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccc-------cccc
Confidence 1111222233332 56665 555666666666666666666651 110000 0111
Q ss_pred CccccccCcccc--cccceeEEEccccccccccCccccCCcCCceEeccCCc-ccc-cCCccccCCC-------CCCEEE
Q 002155 147 NNFTGIIPVSIW--NSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNM-LKG-HLPKEIGNLS-------ALSVLD 215 (959)
Q Consensus 147 n~l~~~~p~~~~--~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~-~~~~~~~~l~-------~L~~L~ 215 (959)
|.+.+.+|..++ ++++|+.|++++|.+.+.+|..|+++++|+.|+|++|+ +++ .+|..|++++ +|++|+
T Consensus 475 n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 475 DYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred ccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 222223555544 55666666666665555556556666666666666665 554 4555444433 666666
Q ss_pred ccCCcCCccCCc--cccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 216 LNSNLFDGIIPY--ELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 216 L~~N~i~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
|++|.++ .+|. .++++++|++|+|++|+++ .+| .|+.+++|+.|+|++|+++
T Consensus 555 Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 555 MGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp CCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS
T ss_pred eeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc
Confidence 6666665 4555 5566666666666666665 334 5555666666666555554
No 29
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.8e-48 Score=464.44 Aligned_cols=454 Identities=19% Similarity=0.249 Sum_probs=349.2
Q ss_pred CCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCcccc------c------cCCcccccCCCCceeeecccccccccCcc
Q 002155 66 SMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLT------G------TIEGVFEKCSNLSQLVIFRNHIYGSIPEY 133 (959)
Q Consensus 66 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~------~------~~~~~~~~l~~L~~L~L~~n~~~~~~p~~ 133 (959)
.+++.|+|++|.+.|.+|.+|+.+++|++|+|++|.+. + ..|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 57999999999999999999999999999999999773 1 122222 44556 777777777666665
Q ss_pred cCCC--cccEEeccCCccccccCcccccccceeEEEcc--ccccccccCccccCCcCCceEeccCCccccc---------
Q 002155 134 LSKL--PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAA--NNLLEGSLPYEVGNAAALERLVLTNNMLKGH--------- 200 (959)
Q Consensus 134 ~~~~--~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~--~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~--------- 200 (959)
+... .+..+++....+.. .....++.+.+. .|++++ +|..|+++++|++|+|++|.+++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 5533 13333443322221 111223333332 567776 788888888888888888888864
Q ss_pred --------CCcccc--CCCCCCEEEccCCcCCccCCccccCCCCCCEEEccccc-CCC-CCchhhhcc------cCCCee
Q 002155 201 --------LPKEIG--NLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN-LSG-LIPEKIADL------AQLQCL 262 (959)
Q Consensus 201 --------~~~~~~--~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l------~~L~~L 262 (959)
+|..++ ++++|++|+|++|.+.+.+|..++++++|++|+|++|+ +++ .+|..++.+ ++|++|
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L 310 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEE
Confidence 777777 88888888888888877888888888888888888887 776 667777766 677777
Q ss_pred EcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCc--ccCCcccccEEEccCCcCcccCCccccCC
Q 002155 263 VLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPE--ELGSCVVVVDLLLNNNMLSGKIPGSLSRL 340 (959)
Q Consensus 263 ~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~--~~~~~~~L~~L~L~~n~i~~~~~~~~~~l 340 (959)
+|++|+++ .+|. .++.+++|+.|++++|++++.+| .|..+
T Consensus 311 ~L~~n~l~-------------------------------------~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l 352 (636)
T 4eco_A 311 YIGYNNLK-------------------------------------TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSE 352 (636)
T ss_dssp ECCSSCCS-------------------------------------SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEE
T ss_pred ECCCCcCC-------------------------------------ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCC
Confidence 77777664 4555 66677777777777777776666 77777
Q ss_pred CCCCEEEccCCCCCCCCCCCcCCCCc-ceEEEeeCcccCCccccccccCC--CCcEEEccCCcCCCCCCCccC-------
Q 002155 341 TNLTTLDLSRNQLTGPIPSEFGDSIK-LQGLYLGNNQLTGSIPWSLGSLG--GLVKLNLTGNKLSGKVPTSFG------- 410 (959)
Q Consensus 341 ~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~--~L~~L~L~~N~i~~~~~~~~~------- 410 (959)
++|++|++++|+++ .+|..+..+++ |+.|++++|.++ .+|..+..++ +|++|++++|++++..|..|.
T Consensus 353 ~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~ 430 (636)
T 4eco_A 353 IKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPF 430 (636)
T ss_dssp EEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCC
T ss_pred CCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccc
Confidence 77777888777777 56667777777 888888888877 6676666544 788888888888887887777
Q ss_pred CcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchh-----hhhhceeccCCcccCCCCCcccc-
Q 002155 411 NLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSA-----AWKIATMNMSNNLFDGGLPRSLG- 484 (959)
Q Consensus 411 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~-----~~~l~~L~ls~N~l~~~~p~~~~- 484 (959)
.+++|++|+|++|+++...+..+..+++|+.|++++|+++.++...|.... ...++.|++++|.++ .+|..+.
T Consensus 431 ~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 509 (636)
T 4eco_A 431 KGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRA 509 (636)
T ss_dssp CCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGST
T ss_pred cCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhh
Confidence 778899999999999854445566789999999999999988887776542 127999999999999 6888887
Q ss_pred -CccccceeeeccccccccCCcCCcCCCCCcEEeC------CCCcCCCCCCccccCCCCccEEecccCcCcccCCCCccc
Q 002155 485 -NLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDV------SRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGIC 557 (959)
Q Consensus 485 -~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 557 (959)
.+++|+.|+|++|++++ +|..+..+++|++|+| ++|++.+.+|..+..+++|++|+|++|++..++... .
T Consensus 510 ~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ip~~~--~ 586 (636)
T 4eco_A 510 TTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKI--T 586 (636)
T ss_dssp TTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCBCCSCC--C
T ss_pred ccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCCccCHhH--h
Confidence 99999999999999996 8999999999999999 568899999999999999999999999996555443 3
Q ss_pred CCCccccccCCCCCCC
Q 002155 558 QNLSKISLTGNKDLCG 573 (959)
Q Consensus 558 ~~l~~l~l~~N~~~c~ 573 (959)
++|+.+++++|++.|-
T Consensus 587 ~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 587 PNISVLDIKDNPNISI 602 (636)
T ss_dssp TTCCEEECCSCTTCEE
T ss_pred CcCCEEECcCCCCccc
Confidence 8999999999999873
No 30
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.3e-48 Score=427.47 Aligned_cols=261 Identities=29% Similarity=0.433 Sum_probs=211.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCC-CceeccccceecC-C
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKH-QNLVPLLGYCSFD-E 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~-~ 748 (959)
.++|++.+.||+|+||+||+|++. .++.||||++.... ....++|.+|++++++++| ||||+++|+|..+ +
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 468899999999999999999854 23579999987543 3445679999999999965 8999999998664 5
Q ss_pred ceEEEEEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
..++|||||++|+|.++++.... ....+++.++..++.|||+||+||| +++||||||||+|||++
T Consensus 143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl~ 219 (353)
T 4ase_A 143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLS 219 (353)
T ss_dssp CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceeeC
Confidence 68999999999999999986432 1235899999999999999999999 88999999999999999
Q ss_pred CCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCc
Q 002155 817 EEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGN 894 (959)
Q Consensus 817 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~ 894 (959)
+++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||......
T Consensus 220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~----- 294 (353)
T 4ase_A 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----- 294 (353)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-----
T ss_pred CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-----
Confidence 9999999999999876543332 2345578999999999999999999999999999999998 89998643211
Q ss_pred hHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 895 LVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+...+..+... .. +..+...+.+++.+||+.||++||||+||+++|+++.
T Consensus 295 --~~~~~~i~~g~~~-----~~----p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 295 --EEFCRRLKEGTRM-----RA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp --HHHHHHHHHTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHcCCCC-----CC----CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 1233333333211 11 1122346788999999999999999999999999873
No 31
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.7e-46 Score=452.27 Aligned_cols=521 Identities=19% Similarity=0.153 Sum_probs=346.3
Q ss_pred cCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccc
Q 002155 32 GSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFE 111 (959)
Q Consensus 32 ~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 111 (959)
+++|+.+. +.+++|+|++|++.+..|.+|.++++|++|||++|+|++..|.+|.++++|++|+|++|+|+++++++|.
T Consensus 44 ~~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~ 121 (635)
T 4g8a_A 44 YKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS 121 (635)
T ss_dssp SSCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGT
T ss_pred CccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhc
Confidence 34554443 2455566666655544444555566666666666655544455555556666666666655555555555
Q ss_pred cCCCCceeeecccccccccCcccCCC-cccEEeccCCccccc-cCcccccccceeEEEccccccccccCccccCCcCCc-
Q 002155 112 KCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGI-IPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALE- 188 (959)
Q Consensus 112 ~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~-~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~- 188 (959)
++++|++|+|++|.+.+..+..++.+ +|++|++++|++++. .|..+..+++|++|++++|++++..+..|..+.+++
T Consensus 122 ~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~ 201 (635)
T 4g8a_A 122 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 201 (635)
T ss_dssp TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTT
T ss_pred CCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhh
Confidence 55556555555555555444444444 355555555555442 344455555555555555555544455554444332
Q ss_pred ---eEeccCCcccccCCccccCCCCCCEEEccCCcCCc-cCCccccCCCCCCEEEccccc------CCCCCchhhhcccC
Q 002155 189 ---RLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDG-IIPYELGDCISLTTLDLGNNN------LSGLIPEKIADLAQ 258 (959)
Q Consensus 189 ---~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~------l~~~~~~~~~~l~~ 258 (959)
.++++.|.++...+.. .....++.+++++|.... ..+..+..+..++...+..+. +.......+..+..
T Consensus 202 ~~~~~~ls~n~l~~i~~~~-~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 280 (635)
T 4g8a_A 202 LNLSLDLSLNPMNFIQPGA-FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCN 280 (635)
T ss_dssp CCCEEECTTCCCCEECTTT-TTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGG
T ss_pred hhhhhhcccCcccccCccc-ccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccc
Confidence 3455555555322222 222334455555554331 222334444444444443221 12222333444444
Q ss_pred CCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCcccc
Q 002155 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLS 338 (959)
Q Consensus 259 L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~ 338 (959)
+..+.+..+...... ......+..+.++..+++..+.+... ..+.....++.|.+.+|.+....+.
T Consensus 281 l~~~~l~~~~~~~~~---------~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~--- 346 (635)
T 4g8a_A 281 LTIEEFRLAYLDYYL---------DGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTL--- 346 (635)
T ss_dssp SEEEEEEEECCCSCE---------EECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCC---
T ss_pred hhhhhhhhhhhcccc---------cchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcc---
Confidence 444444433322100 11122344455666777777776533 2355667888999999888765443
Q ss_pred CCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCC--ccccccccCCCCcEEEccCCcCCCCCCCccCCccccc
Q 002155 339 RLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTG--SIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416 (959)
Q Consensus 339 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 416 (959)
.++.|+.+++++|.+... ..+..+++|+.|++++|.+.. ..+..+..+.+|+.+++..|.+. ..+..+..+++|+
T Consensus 347 ~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~ 423 (635)
T 4g8a_A 347 KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLE 423 (635)
T ss_dssp BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCC
T ss_pred cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-ccccccccccccc
Confidence 467788999999987743 345578899999999999863 34556678889999999999988 4566788999999
Q ss_pred ccccCCccccCCCc-hhhhcccccceEeeccccccCCccccccchhhhhhceeccCCccc-CCCCCccccCccccceeee
Q 002155 417 HLDLSFNELDGQLP-SSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLF-DGGLPRSLGNLSYLTNLDL 494 (959)
Q Consensus 417 ~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l-~~~~p~~~~~l~~L~~L~L 494 (959)
.++++.|......+ ..+..+++++.++++.|.+++..+..|.... .++.|++++|.+ .+..|..|..+++|++|+|
T Consensus 424 ~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~--~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~L 501 (635)
T 4g8a_A 424 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS--SLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 501 (635)
T ss_dssp EEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCT--TCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred chhhhhccccccccccccccccccccccccccccccccccccccch--hhhhhhhhhcccccccCchhhhhccccCEEEC
Confidence 99999888765444 6788999999999999999999888887766 789999999975 4568899999999999999
Q ss_pred ccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCc-cc-CCCccccccCCCCCC
Q 002155 495 HENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSG-IC-QNLSKISLTGNKDLC 572 (959)
Q Consensus 495 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~-~~l~~l~l~~N~~~c 572 (959)
++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++++|... .+ .+|+.+++++|||.|
T Consensus 502 s~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 502 SQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 9999999899999999999999999999999999999999999999999999999998753 33 679999999999999
Q ss_pred CC
Q 002155 573 GK 574 (959)
Q Consensus 573 ~~ 574 (959)
+|
T Consensus 582 ~C 583 (635)
T 4g8a_A 582 TC 583 (635)
T ss_dssp SG
T ss_pred cC
Confidence 64
No 32
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.4e-48 Score=453.10 Aligned_cols=456 Identities=19% Similarity=0.201 Sum_probs=327.5
Q ss_pred cEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccc
Q 002155 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRN 124 (959)
Q Consensus 45 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 124 (959)
++|++++|++. .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999998 7888776 89999999999999777789999999999999999999988999999999999999999
Q ss_pred ccccccCcccCCCcccEEeccCCcccc-ccCcccccccceeEEEccccccccccCccccCCcCC--ceEeccCCcc--cc
Q 002155 125 HIYGSIPEYLSKLPLMVLDLDSNNFTG-IIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAAL--ERLVLTNNML--KG 199 (959)
Q Consensus 125 ~~~~~~p~~~~~~~L~~L~ls~n~l~~-~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L--~~L~L~~n~i--~~ 199 (959)
.+.+ +|.. ...+|++|++++|++++ ..|..++++++|++|++++|.+++ ..+..+++| ++|++++|.+ .+
T Consensus 80 ~l~~-lp~~-~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 80 KLVK-ISCH-PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp CCCE-EECC-CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred ceee-cCcc-ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc
Confidence 9984 5554 55579999999999987 467889999999999999998875 467777888 9999999998 77
Q ss_pred cCCccccCCC-CCCEEEccCCcCCccCC-ccccCCCCCCEEEccccc-------CCCCCchhhhcccCCCeeEcccccCC
Q 002155 200 HLPKEIGNLS-ALSVLDLNSNLFDGIIP-YELGDCISLTTLDLGNNN-------LSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 200 ~~~~~~~~l~-~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
..|..+..+. +...+++++|.+.+.++ ..+..+++|+.|++++|. +.+.++ .+..+++|+.|++++|.++
T Consensus 155 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEE
T ss_pred cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccC
Confidence 7787777766 34467788888765444 457778888999998887 555444 6788888888888888765
Q ss_pred CCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccc-----cCCCCCCE
Q 002155 271 GPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSL-----SRLTNLTT 345 (959)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~-----~~l~~L~~ 345 (959)
+..+.. +..... .++|+.|++++|++++.+|..+ ..+++|+.
T Consensus 234 ~~~~~~---------~~~~~~------------------------~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~ 280 (520)
T 2z7x_B 234 WNSFIR---------ILQLVW------------------------HTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSI 280 (520)
T ss_dssp HHHHHH---------HHHHHH------------------------TSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEE
T ss_pred HHHHHH---------HHHHhh------------------------hCcccEEEeecccccCccccchhhcccccCceeEe
Confidence 211000 000001 1234444444444444444444 45555555
Q ss_pred EEccCCCCCCCCCCCcCCC---CcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC
Q 002155 346 LDLSRNQLTGPIPSEFGDS---IKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF 422 (959)
Q Consensus 346 L~Ls~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 422 (959)
+++++|.+ ......+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..++++++|++|++++
T Consensus 281 l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 357 (520)
T 2z7x_B 281 HQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQM 357 (520)
T ss_dssp EEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCS
T ss_pred ccccccce-ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccC
Confidence 55555555 1111222222 34555555555554221 124566666677777766666666666777777777777
Q ss_pred ccccC--CCchhhhcccccceEeeccccccC-CccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccc
Q 002155 423 NELDG--QLPSSLSNILNLVGLYLQHNKLSG-PVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKF 499 (959)
Q Consensus 423 N~l~~--~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 499 (959)
|++++ .+|..+..+++|+.|++++|++++ ++.. .+..+++|++|+|++|++
T Consensus 358 N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~--------------------------~~~~l~~L~~L~Ls~N~l 411 (520)
T 2z7x_B 358 NQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKG--------------------------DCSWTKSLLSLNMSSNIL 411 (520)
T ss_dssp SCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGC--------------------------SCCCCTTCCEEECCSSCC
T ss_pred CccCccccchHHHhhCCCCCEEECCCCcCCcccccc--------------------------hhccCccCCEEECcCCCC
Confidence 77764 344566677777777777777665 3322 245677888888888888
Q ss_pred cccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCC-CcccCCCccccccCCCCCCCC
Q 002155 500 TGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR-SGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 500 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~~~c~~ 574 (959)
++.+|..+. ++|++|++++|+|+ .+|..+..+++|++|++++|+++++++. ...+.+|+.+++++||+.|+|
T Consensus 412 ~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 412 TDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp CGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred Ccchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccC
Confidence 877777665 68899999999988 6777777889999999999999887765 456778899999999999853
No 33
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.1e-48 Score=417.24 Aligned_cols=248 Identities=25% Similarity=0.329 Sum_probs=197.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999853 47889999986532 2233467889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|||||+||+|.++++... .+++.++..++.||+.||+||| ++||+||||||+|||++.++++||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999998764 5899999999999999999999 899999999999999999999999999999865
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... .......+||+.|||||++.+..|+.++||||+||++|||+||++||..... .+ +...+......
T Consensus 177 ~~~-~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-------~~-~~~~i~~~~~~--- 244 (304)
T 3ubd_A 177 IDH-EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-------KE-TMTMILKAKLG--- 244 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HH-HHHHHHHCCCC---
T ss_pred cCC-CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-------HH-HHHHHHcCCCC---
Confidence 432 2233456899999999999999999999999999999999999999964321 11 22222222110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM-----LHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~ell~~ 952 (959)
.| ......+.+++.+||++||++|||+ +|++++
T Consensus 245 ~p-------~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 245 MP-------QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp CC-------TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred CC-------CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 11 1123467889999999999999984 677653
No 34
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.2e-47 Score=446.34 Aligned_cols=434 Identities=18% Similarity=0.155 Sum_probs=307.4
Q ss_pred cEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCC
Q 002155 69 KSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSN 147 (959)
Q Consensus 69 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n 147 (959)
++||+++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+.+..|..+..+ +|++|++++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 58999999999 6787775 899999999999998888899999999999998888887767666655 4777777777
Q ss_pred ccccccCcccccccceeEEEcccccccc-ccCccccCCcCCceEeccCCcccccCCccccCCCCC--CEEEccCCcC--C
Q 002155 148 NFTGIIPVSIWNSETLMEFSAANNLLEG-SLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSAL--SVLDLNSNLF--D 222 (959)
Q Consensus 148 ~l~~~~p~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L--~~L~L~~N~i--~ 222 (959)
+++++ |.. .+++|++|++++|.+++ .+|..|+++++|++|+|++|.|++ ..+..+++| ++|++++|.+ .
T Consensus 80 ~l~~l-p~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLVKI-SCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCCEE-ECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred ceeec-Ccc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 76632 322 45555555555555543 234455555555555555555543 234444444 5555555554 4
Q ss_pred ccCCccccCCC-CCCEEEcccccCCCCCc-hhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceec
Q 002155 223 GIIPYELGDCI-SLTTLDLGNNNLSGLIP-EKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDL 300 (959)
Q Consensus 223 ~~~~~~~~~l~-~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L 300 (959)
+..|..+..+. +...+++++|++.+..+ ..+..+++|+.|++++|.-.... .
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~----------------~---------- 207 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKC----------------S---------- 207 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTT----------------H----------
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccccccccccc----------------c----------
Confidence 44444444333 12233444444432222 23344444444444444310000 0
Q ss_pred CCCcCCCCCCcccCCcccccEEEccCCcCcccCCcccc---CCCCCCEEEccCCCCCCCCCCCc-----CCCCcceEEEe
Q 002155 301 SYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLS---RLTNLTTLDLSRNQLTGPIPSEF-----GDSIKLQGLYL 372 (959)
Q Consensus 301 ~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~---~l~~L~~L~Ls~n~l~~~~~~~~-----~~l~~L~~L~L 372 (959)
.+.+.+| .++.+++|+.|++.+|.+++..+..+. ..++|++|++++|++++..|..+ ..+.+|+.+++
T Consensus 208 ---~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l 283 (520)
T 2z7x_B 208 ---YFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQV 283 (520)
T ss_dssp ---HHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEE
T ss_pred ---eeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccc
Confidence 0333334 567778888888888887654332221 24689999999999998888888 88999999999
Q ss_pred eCcccCCccc-cccccC---CCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeecccc
Q 002155 373 GNNQLTGSIP-WSLGSL---GGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNK 448 (959)
Q Consensus 373 ~~n~l~~~~~-~~~~~l---~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 448 (959)
++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..+..+++|+.|++++|+
T Consensus 284 ~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 359 (520)
T 2z7x_B 284 VSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQ 359 (520)
T ss_dssp EECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSC
T ss_pred cccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCc
Confidence 99999 344 455544 67999999999987432 23678899999999999998889999999999999999999
Q ss_pred ccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCc-CCcCCCCCcEEeCCCCcCCCCC
Q 002155 449 LSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPP-DLGNLMQLEYLDVSRNRLCGQI 527 (959)
Q Consensus 449 l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~ 527 (959)
+++++ .+|..+..+++|++|+|++|++++.+|. .+..+++|++|++++|++++..
T Consensus 360 l~~l~------------------------~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 415 (520)
T 2z7x_B 360 LKELS------------------------KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTI 415 (520)
T ss_dssp CCBHH------------------------HHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGG
T ss_pred cCccc------------------------cchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcch
Confidence 87542 2345677899999999999999975665 4889999999999999999877
Q ss_pred CccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCC
Q 002155 528 PETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDL 571 (959)
Q Consensus 528 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~ 571 (959)
|..+. ++|++|++++|+++.+++....+.+|+.+++++|+..
T Consensus 416 ~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 416 FRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp GGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred hhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC
Confidence 77665 7999999999999988777778899999999999754
No 35
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.5e-46 Score=450.47 Aligned_cols=458 Identities=20% Similarity=0.214 Sum_probs=280.4
Q ss_pred CCCcEEEcCCCcCCCCCCcccCCCCCCcEEEc-cCccccccCCcccccC-CCCceee---e------------ccccccc
Q 002155 66 SMLKSISLSNNFLSGSIPRELCTSESLEEIDL-DGNLLTGTIEGVFEKC-SNLSQLV---I------------FRNHIYG 128 (959)
Q Consensus 66 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L-~~n~l~~~~~~~~~~l-~~L~~L~---L------------~~n~~~~ 128 (959)
..++.|+|++|.+.|.+|.+|+.|++|++|+| ++|.+.+..+-.-... ..+.... + ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57999999999999999999999999999999 9998886533211111 0000000 0 0000000
Q ss_pred cc-------Cc-----ccCCCcccEEecc--CCccccccCcccccccceeEEEcccccccc-----------------cc
Q 002155 129 SI-------PE-----YLSKLPLMVLDLD--SNNFTGIIPVSIWNSETLMEFSAANNLLEG-----------------SL 177 (959)
Q Consensus 129 ~~-------p~-----~~~~~~L~~L~ls--~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~-----------------~~ 177 (959)
.. |. ......++.+.++ .|++++ +|..++++++|+.|++++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 00 00 0111223333343 377777 67778888888888888888876 27
Q ss_pred Ccccc--CCcCCceEeccCCcccccCCccccCCCCCCEEEccCCc-CCc-cCCccccCCC-------CCCEEEcccccCC
Q 002155 178 PYEVG--NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNL-FDG-IIPYELGDCI-------SLTTLDLGNNNLS 246 (959)
Q Consensus 178 ~~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~-i~~-~~~~~~~~l~-------~L~~L~L~~N~l~ 246 (959)
|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|. +++ .+|..++.++ +|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 77766 77777777777777777777777777777777777776 776 5666555554 7777777777777
Q ss_pred CCCch--hhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCccc-ccEEE
Q 002155 247 GLIPE--KIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVV-VVDLL 323 (959)
Q Consensus 247 ~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~-L~~L~ 323 (959)
.+|. .|+.+++|+.|+|++|+++ .+| .+..+++|+.|++++|.++ .+|..+..+++ |+.|+
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-------------~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~ 625 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-------------AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLG 625 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-------------CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEE
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-------------hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEE
Confidence 4565 7777777777777777765 222 2334455555666666655 55555555555 55555
Q ss_pred ccCCcCcccCCccccCCCC--CCEEEccCCCCCCCCCCCc---C--CCCcceEEEeeCcccCCccccccccCCCCcEEEc
Q 002155 324 LNNNMLSGKIPGSLSRLTN--LTTLDLSRNQLTGPIPSEF---G--DSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNL 396 (959)
Q Consensus 324 L~~n~i~~~~~~~~~~l~~--L~~L~Ls~n~l~~~~~~~~---~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 396 (959)
+++|+++ .+|..+..++. |+.|++++|++.+.+|... . .+.+|+.|++++|.++...+..+..+++|+.|+|
T Consensus 626 Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~L 704 (876)
T 4ecn_A 626 FSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIIL 704 (876)
T ss_dssp CCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEEC
T ss_pred CcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEEC
Confidence 5555555 34444444432 5555555555554333221 1 2235555555555555222222334555555555
Q ss_pred cCCcCCCCCCCccCC-------cccccccccCCccccCCCchhhh--cccccceEeeccccccCCccccccchhhhhhce
Q 002155 397 TGNKLSGKVPTSFGN-------LKELTHLDLSFNELDGQLPSSLS--NILNLVGLYLQHNKLSGPVDELFSNSAAWKIAT 467 (959)
Q Consensus 397 ~~N~i~~~~~~~~~~-------l~~L~~L~L~~N~l~~~~~~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 467 (959)
++|+|+.+.+..+.. +++|++|+|++|+++ .+|..+. .+++|+ .
T Consensus 705 s~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~--------------------------~ 757 (876)
T 4ecn_A 705 SNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLS--------------------------N 757 (876)
T ss_dssp CSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCC--------------------------E
T ss_pred CCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcC--------------------------E
Confidence 555555222222221 124455555555544 3444443 444444 4
Q ss_pred eccCCcccCCCCCccccCccccceeeecc------ccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEe
Q 002155 468 MNMSNNLFDGGLPRSLGNLSYLTNLDLHE------NKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLS 541 (959)
Q Consensus 468 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 541 (959)
|+|++|.+++ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+.|+
T Consensus 758 L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~Ld 833 (876)
T 4ecn_A 758 MDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILD 833 (876)
T ss_dssp EECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEE
T ss_pred EEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEE
Confidence 5555555554 466666777888888765 788888999999999999999999999 57787765 6899999
Q ss_pred cccCcCcccCCCCc-ccCCCccccccCCCCCC
Q 002155 542 LAENRLEGMVPRSG-ICQNLSKISLTGNKDLC 572 (959)
Q Consensus 542 l~~N~l~~~~~~~~-~~~~l~~l~l~~N~~~c 572 (959)
|++|++..+.+... .......+.+.+|++.|
T Consensus 834 Ls~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 834 IADNPNISIDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp CCSCTTCEEECGGGHHHHHTTCCEEECCTTSE
T ss_pred CCCCCCCccChHHccccccchheeecCCCccc
Confidence 99999887765432 11234556677777654
No 36
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.7e-47 Score=408.93 Aligned_cols=251 Identities=24% Similarity=0.385 Sum_probs=190.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCC--------
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE-------- 748 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-------- 748 (959)
++|++.+.||+|+||+||+|+++ +|+.||||++.... ....+.+.+|++++++++|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46889999999999999999875 68999999986543 334567889999999999999999999886543
Q ss_pred ----ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEc
Q 002155 749 ----EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVA 824 (959)
Q Consensus 749 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 824 (959)
..|+|||||++|+|.++++... .....++..++.++.||++||+||| ++||+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEc
Confidence 3689999999999999998654 2334567788999999999999999 8899999999999999999999999
Q ss_pred cccccccccccccc-----------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC
Q 002155 825 DFGLARLISACETH-----------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG 893 (959)
Q Consensus 825 Dfg~~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~ 893 (959)
|||+|+........ .....+||+.|||||++.+..|+.++||||+||++|||++ ||....+
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~----- 232 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME----- 232 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH-----
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH-----
Confidence 99999876532211 1234579999999999999999999999999999999996 7643111
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ....+.... .| +...+......+++.+||++||++|||+.|++++
T Consensus 233 -~~~-~~~~~~~~~-----~p----~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 233 -RVR-TLTDVRNLK-----FP----PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp -HHH-HHHHHHTTC-----CC----HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHH-HHHHHhcCC-----CC----CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 011 111111111 01 1112233456789999999999999999999873
No 37
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.6e-44 Score=436.89 Aligned_cols=523 Identities=19% Similarity=0.161 Sum_probs=420.7
Q ss_pred ccCCCCCcCccccCccchhhhhhcCCcccCC-CcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCC
Q 002155 4 FNALSGSLPEELSDLPILTFAAEKNQLSGSL-PSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSI 82 (959)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 82 (959)
.-+|+ ++|+.|- +.++.++..+|-++.+ |.+|.++++|++|+|++|++.+..|.+|+++++|++|+|++|+|++..
T Consensus 40 ~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~ 116 (635)
T 4g8a_A 40 ELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 116 (635)
T ss_dssp TSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEEC
T ss_pred CCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCC
Confidence 45788 8998763 2345555554444455 468999999999999999999777788999999999999999999777
Q ss_pred CcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccc-cCcccCCC-cccEEeccCCccccccCcccccc
Q 002155 83 PRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGS-IPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNS 160 (959)
Q Consensus 83 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~-~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~ 160 (959)
+..|.++++|++|+|++|+++++++..|+++++|++|+|++|.+... .|..+..+ .|++|++++|++++..|..+..+
T Consensus 117 ~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L 196 (635)
T 4g8a_A 117 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 196 (635)
T ss_dssp GGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHH
T ss_pred HHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccch
Confidence 78899999999999999999999999999999999999999999764 57777766 59999999999999999888877
Q ss_pred cce----eEEEccccccccccCccccCCcCCceEeccCCcccc-cCCccccCCCCCCEEEccCCc------CCccCCccc
Q 002155 161 ETL----MEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKG-HLPKEIGNLSALSVLDLNSNL------FDGIIPYEL 229 (959)
Q Consensus 161 ~~L----~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~N~------i~~~~~~~~ 229 (959)
.++ ..++++.|.++...+. ......++.|++++|.... ..+..+..+..++...+..+. +.......+
T Consensus 197 ~~l~~~~~~~~ls~n~l~~i~~~-~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~ 275 (635)
T 4g8a_A 197 HQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSAL 275 (635)
T ss_dssp HTCTTCCCEEECTTCCCCEECTT-TTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTT
T ss_pred hhhhhhhhhhhcccCcccccCcc-cccchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccccc
Confidence 654 4788999999855554 4455567889999987653 344567888888887775433 333344455
Q ss_pred cCCCCCCEEEcccccCCC---CCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCC
Q 002155 230 GDCISLTTLDLGNNNLSG---LIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLS 306 (959)
Q Consensus 230 ~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~ 306 (959)
..+..+..+++..+.... ..+..+..+.+++.+++.+|.+. ...++.....++.|++++|.+.
T Consensus 276 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~--------------~~~~~~~~~~L~~L~l~~~~~~ 341 (635)
T 4g8a_A 276 EGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIE--------------RVKDFSYNFGWQHLELVNCKFG 341 (635)
T ss_dssp GGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEE--------------ECGGGGSCCCCSEEEEESCEES
T ss_pred ccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccc--------------cccccccchhhhhhhccccccc
Confidence 666677777776654432 23455677788888888888764 2334455567788888888887
Q ss_pred CCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCC--CCCCCcCCCCcceEEEeeCcccCCccccc
Q 002155 307 GPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG--PIPSEFGDSIKLQGLYLGNNQLTGSIPWS 384 (959)
Q Consensus 307 ~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 384 (959)
...+. .+..|+.+.+..|.+... ..+..+++|+.|++++|.+.. ..+..+..+.+|+.++++.|.+. ..+..
T Consensus 342 ~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~ 415 (635)
T 4g8a_A 342 QFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSN 415 (635)
T ss_dssp SCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSC
T ss_pred CcCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-ccccc
Confidence 55443 456678888888887643 335578999999999998863 34455667789999999999887 45667
Q ss_pred cccCCCCcEEEccCCcCCCCCC-CccCCcccccccccCCccccCCCchhhhcccccceEeeccccc-cCCccccccchhh
Q 002155 385 LGSLGGLVKLNLTGNKLSGKVP-TSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKL-SGPVDELFSNSAA 462 (959)
Q Consensus 385 ~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l-~~~~~~~~~~~~~ 462 (959)
+..+++|+.+++.+|......+ ..|..+++++.++++.|.+.+..+..+..+++|+.|++++|++ .++.++.|....
T Consensus 416 ~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~- 494 (635)
T 4g8a_A 416 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR- 494 (635)
T ss_dssp CTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCT-
T ss_pred ccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhcc-
Confidence 8889999999999887765543 5678899999999999999988888999999999999999974 455667777665
Q ss_pred hhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCC-CCccEEe
Q 002155 463 WKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSL-SNLLYLS 541 (959)
Q Consensus 463 ~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ 541 (959)
.++.|+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|||++|+|++..|..+..+ ++|++|+
T Consensus 495 -~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~ 573 (635)
T 4g8a_A 495 -NLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 573 (635)
T ss_dssp -TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEE
T ss_pred -ccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEE
Confidence 78999999999999999999999999999999999998888899999999999999999999999999998 6899999
Q ss_pred cccCcCcccCC
Q 002155 542 LAENRLEGMVP 552 (959)
Q Consensus 542 l~~N~l~~~~~ 552 (959)
|++|++.+-..
T Consensus 574 L~~Np~~C~C~ 584 (635)
T 4g8a_A 574 LTQNDFACTCE 584 (635)
T ss_dssp CTTCCBCCSGG
T ss_pred eeCCCCcccCC
Confidence 99999998654
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=7.8e-45 Score=431.31 Aligned_cols=457 Identities=19% Similarity=0.152 Sum_probs=312.6
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeec
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIF 122 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 122 (959)
..+++++++|++. .+|..+. ++|++|+|++|++++..|.+|.++++|++|+|++|++++..|++|.++++|++|+|+
T Consensus 32 ~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 3488999999988 5887664 889999999999997777899999999999999999998889999999999999999
Q ss_pred ccccccccCcccCCCcccEEeccCCccccc-cCcccccccceeEEEccccccccccCccccCCcCC--ceEeccCCcc--
Q 002155 123 RNHIYGSIPEYLSKLPLMVLDLDSNNFTGI-IPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAAL--ERLVLTNNML-- 197 (959)
Q Consensus 123 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~-~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L--~~L~L~~n~i-- 197 (959)
+|.+.. +|.. ...+|++|++++|++++. .|..|.++++|++|++++|.+++ ..+..+++| ++|++++|.+
T Consensus 109 ~N~l~~-lp~~-~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 109 HNRLQN-ISCC-PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp TSCCCE-ECSC-CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCC
T ss_pred CCcCCc-cCcc-ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccccc
Confidence 999884 4544 445688899999988874 35778888888888888888774 345555555 8888888887
Q ss_pred cccCCccccCCC--CCCEEEccCCcCCccCCc-cccCCCCCCEEEcccccCC----CCCchhhhcccCCCeeEcccccCC
Q 002155 198 KGHLPKEIGNLS--ALSVLDLNSNLFDGIIPY-ELGDCISLTTLDLGNNNLS----GLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 198 ~~~~~~~~~~l~--~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
++..|..|..+. .| .+++++|.+.+.++. .+..+++|+.|++++|+.. ......|..+++|+.|+++++.+.
T Consensus 184 ~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 184 KGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEEC
T ss_pred cccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCc
Confidence 667777777654 33 456777777654443 4556777788888777421 011345667777777777766554
Q ss_pred CCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccc-----cCCCCCCE
Q 002155 271 GPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSL-----SRLTNLTT 345 (959)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~-----~~l~~L~~ 345 (959)
+ |.+.+. +..+ ...+|++|++++|.+++.+|..+ ..++.|+.
T Consensus 263 ~-------------------------------~~~~~~-~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~ 309 (562)
T 3a79_B 263 W-------------------------------KCSVKL-FQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMI 309 (562)
T ss_dssp H-------------------------------HHHHHH-HHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEE
T ss_pred H-------------------------------HHHHHH-HHhh-hcccccEEEEeccEeeccccchhhhcccccchheeh
Confidence 1 111100 0111 11245556666666555555544 45555555
Q ss_pred EEccCCCCCCCCC-CCcCC---CCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccC
Q 002155 346 LDLSRNQLTGPIP-SEFGD---SIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLS 421 (959)
Q Consensus 346 L~Ls~n~l~~~~~-~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 421 (959)
++++.|.+ ..| ..+.. ..+|+.|++++|.+.... ....+++|++|++++|++++..|..+.++++|++|+++
T Consensus 310 ~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 385 (562)
T 3a79_B 310 EHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQ 385 (562)
T ss_dssp EEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECC
T ss_pred hhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECC
Confidence 55555555 122 11111 134666666666654221 11455666666666666665556666666666666666
Q ss_pred CccccCCC--chhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCC-ccccCccccceeeecccc
Q 002155 422 FNELDGQL--PSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLP-RSLGNLSYLTNLDLHENK 498 (959)
Q Consensus 422 ~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~ 498 (959)
+|++++.. |..+..+++|+.|++++|++++ .+| ..+..+++|++|+|++|+
T Consensus 386 ~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~--------------------------~~~~~~~~~l~~L~~L~l~~n~ 439 (562)
T 3a79_B 386 RNGLKNFFKVALMTKNMSSLETLDVSLNSLNS--------------------------HAYDRTCAWAESILVLNLSSNM 439 (562)
T ss_dssp SSCCCBTTHHHHTTTTCTTCCEEECTTSCCBS--------------------------CCSSCCCCCCTTCCEEECCSSC
T ss_pred CCCcCCcccchhhhcCCCCCCEEECCCCcCCC--------------------------ccChhhhcCcccCCEEECCCCC
Confidence 66665422 2445556666666666665554 222 346678899999999999
Q ss_pred ccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCC-CcccCCCccccccCCCCCCCC
Q 002155 499 FTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR-SGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 499 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~~~c~~ 574 (959)
+++.+|..+. ++|++|+|++|+|+ .+|..+..+++|++|++++|+++++++. ...+.+|+.+++++|||.|+|
T Consensus 440 l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 440 LTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp CCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred CCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 9877777665 68999999999998 5777677999999999999999988776 566788999999999999954
No 39
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-44 Score=400.05 Aligned_cols=263 Identities=24% Similarity=0.319 Sum_probs=200.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceec------CC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSF------DE 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~ 748 (959)
.++|++.+.||+|+||+||+|+++ +|+.||||++.... ....+.+.+|+++|+.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 367999999999999999999875 69999999996532 3344568899999999999999999998653 36
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..|+|||||+ |+|.+++.... .+++.++..++.||+.||+||| +.|||||||||+|||++.++.+||+|||+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~----~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ----PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEEeCCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecce
Confidence 7899999996 68999997643 6899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccc---cccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 829 ARLISAC---ETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 829 ~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
|+.+... ........+||+.|||||++.+. .++.++||||+||++|||++|++||...... +....+.....
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~----~~l~~I~~~~g 280 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV----HQLQLIMMVLG 280 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH----HHHHHHHHHHC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH----HHHHHHHHhcC
Confidence 9876432 12233457899999999987765 5699999999999999999999999653211 11111111111
Q ss_pred cCcccccc-------------CccccCCC----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 KGQAADVL-------------DPTVLTAD----SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 ~~~~~~~~-------------~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........ .+...+.. .......+.+++.+||..||++|||++|++++
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 11000000 00000000 01123457889999999999999999999874
No 40
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=8.2e-44 Score=391.27 Aligned_cols=281 Identities=40% Similarity=0.655 Sum_probs=240.6
Q ss_pred HHHHHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 673 HILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 673 ~~~~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++..++++|+..+.||+|+||.||+|++++++.||||++........+.+.+|+++++.++||||+++++++..++..++
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL 112 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 34457789999999999999999999988899999999887666667789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.........+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 189 (321)
T 2qkw_B 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKG 189 (321)
T ss_dssp EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 99999999999999765544456899999999999999999999 789999999999999999999999999999765
Q ss_pred cccc-ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 833 SACE-THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... ........||+.|+|||++.+..++.++||||+|+++|||++|+.||....+. .......|.............
T Consensus 190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (321)
T 2qkw_B 190 TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVESHNNGQLEQI 268 (321)
T ss_dssp SSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS-SCCCHHHHTHHHHTTTCCCSS
T ss_pred ccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH-HHHHHHHHhhhccccccHHHh
Confidence 4322 22223446899999999988888999999999999999999999999765433 334555666665555555566
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.++........+....+.+++.+||+.||++|||++|++++|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 6666666667888999999999999999999999999999999874
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.8e-44 Score=397.94 Aligned_cols=199 Identities=27% Similarity=0.349 Sum_probs=169.7
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 751 (959)
..++|++.+.||+|+||+||+|+.+ +++.||||++.... ....+.+|+++++.+ +|||||+++++|.++++.|
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 4578999999999999999999753 46789999986543 235678899999988 6999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-CcEEEccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLAR 830 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~ 830 (959)
+||||+++|+|.++++ .+++.++..++.|++.||+||| +.||+||||||+|||++.+ +.+||+|||+|+
T Consensus 97 lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 97 IAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 9999999999999984 3788999999999999999999 8999999999999999877 799999999997
Q ss_pred ccccccc---------------------------cccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCC
Q 002155 831 LISACET---------------------------HVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEP 882 (959)
Q Consensus 831 ~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p 882 (959)
....... ......+||+.|||||++.+. .|+.++||||+||++|||++|+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 5432111 112345799999999988765 589999999999999999999999
Q ss_pred CCCCC
Q 002155 883 TGPEF 887 (959)
Q Consensus 883 ~~~~~ 887 (959)
|....
T Consensus 247 f~~~~ 251 (361)
T 4f9c_A 247 FYKAS 251 (361)
T ss_dssp SSCCS
T ss_pred CCCCC
Confidence 96543
No 42
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=8.3e-44 Score=392.34 Aligned_cols=291 Identities=42% Similarity=0.711 Sum_probs=245.2
Q ss_pred ccccCHHHHHHHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccce
Q 002155 666 LMRLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYC 744 (959)
Q Consensus 666 ~~~~~~~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~ 744 (959)
...++..++...+++|++.+.||+|+||.||+|+.++|+.||||++..... .....+.+|+++++.++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456788889999999999999999999999999988899999999875432 2233688999999999999999999999
Q ss_pred ecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEc
Q 002155 745 SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVA 824 (959)
Q Consensus 745 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 824 (959)
..++..++||||+++|+|.++++........+++..++.++.|++.||+|||+.+..||+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999998876556679999999999999999999994222399999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC-ccccCCchHHHHHHHh
Q 002155 825 DFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEF-KDIEGGNLVGWVFQKM 903 (959)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~-~~~~~~~~~~~~~~~~ 903 (959)
|||.++..............||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..........|+....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 999998765444444455679999999999988889999999999999999999999995321 1223344555665555
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
.........+.........+....+.+++.+||+.||++|||++|++++|++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp SSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 55555556666666667788899999999999999999999999999999864
No 43
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.6e-43 Score=409.11 Aligned_cols=250 Identities=23% Similarity=0.298 Sum_probs=200.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHH---HHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHRE---FTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~---~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.++||+|+||+||+|+.+ +|+.||||++.+.. ...... ...++.+++.++|||||+++++|.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 378999999999999999999875 69999999986432 111222 23456777888999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
|+|||||+||+|.+++.... .+++..+..++.||+.||+||| +.|||||||||+|||++.+|++||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999999999998764 5899999999999999999999 8999999999999999999999999999998
Q ss_pred ccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
..... .....+||+.|||||++.+ ..|+.++||||+||++|||++|.+||...... +... +...+......
T Consensus 341 ~~~~~---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~----~~~~-i~~~i~~~~~~ 412 (689)
T 3v5w_A 341 DFSKK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----DKHE-IDRMTLTMAVE 412 (689)
T ss_dssp ECSSC---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC----CHHH-HHHHHHHCCCC
T ss_pred ecCCC---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHH-HHHhhcCCCCC
Confidence 76432 2345689999999999864 57999999999999999999999999643221 1111 22222221110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
. +......+.+++.+||++||++|++ ++||+++
T Consensus 413 ---~-------p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 413 ---L-------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp ---C-------CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred ---C-------CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 1 1123346788999999999999998 6887654
No 44
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=7.1e-43 Score=414.44 Aligned_cols=458 Identities=20% Similarity=0.176 Sum_probs=333.7
Q ss_pred hhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccc
Q 002155 23 FAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLL 102 (959)
Q Consensus 23 ~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l 102 (959)
.++..++-.+.+|..+. +.|++|+|++|++.+..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++
T Consensus 35 ~l~ls~~~L~~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 112 (562)
T 3a79_B 35 MVDYSNRNLTHVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRL 112 (562)
T ss_dssp EEECTTSCCCSCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EEEcCCCCCccCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcC
Confidence 34444445556887665 6888899999998866667888999999999999998877788888889999999999998
Q ss_pred cccCCcccccCCCCceeeecccccccc-cCcccCCC-cccEEeccCCccccccCcccccccce--eEEEcccccc--ccc
Q 002155 103 TGTIEGVFEKCSNLSQLVIFRNHIYGS-IPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETL--MEFSAANNLL--EGS 176 (959)
Q Consensus 103 ~~~~~~~~~~l~~L~~L~L~~n~~~~~-~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L--~~L~l~~n~l--~~~ 176 (959)
+.+++. .+++|++|++++|.+.+. +|..+..+ +|++|++++|++++. .+..+++| ++|++++|.+ ++.
T Consensus 113 ~~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~ 186 (562)
T 3a79_B 113 QNISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGG 186 (562)
T ss_dssp CEECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSS
T ss_pred CccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccccc
Confidence 854444 788899999999988874 45677666 588999999888763 34455555 9999999988 777
Q ss_pred cCccccCCc-CCceEeccCCcccccCCc-cccCCCCCCEEEccCCcC-----CccCCccccCCCCCCEEEcccccCCCCC
Q 002155 177 LPYEVGNAA-ALERLVLTNNMLKGHLPK-EIGNLSALSVLDLNSNLF-----DGIIPYELGDCISLTTLDLGNNNLSGLI 249 (959)
Q Consensus 177 ~~~~~~~l~-~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~N~i-----~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 249 (959)
.|..|..+. ..-.+++++|.+.+.++. .+..+++|+.|++++|.. .+ ....+..+++|+.|+++++.+++..
T Consensus 187 ~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~~ 265 (562)
T 3a79_B 187 ETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTWKC 265 (562)
T ss_dssp SCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECHHH
T ss_pred CcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcHHH
Confidence 788877765 222568888888765554 567889999999999852 22 2345778899999999988876432
Q ss_pred chh---hhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccC
Q 002155 250 PEK---IADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNN 326 (959)
Q Consensus 250 ~~~---~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~ 326 (959)
... ....++|++|++++|.++|.+|..... .....++.|+.+++..
T Consensus 266 ~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~-------------------------------~~~~~L~~L~~~~~~~ 314 (562)
T 3a79_B 266 SVKLFQFFWPRPVEYLNIYNLTITERIDREEFT-------------------------------YSETALKSLMIEHVKN 314 (562)
T ss_dssp HHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCC-------------------------------CCSCSCCEEEEEEEEE
T ss_pred HHHHHHhhhcccccEEEEeccEeeccccchhhh-------------------------------cccccchheehhhccc
Confidence 111 123348889999988887665542110 0013444455555555
Q ss_pred CcCcccCC-ccccC---CCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCC
Q 002155 327 NMLSGKIP-GSLSR---LTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLS 402 (959)
Q Consensus 327 n~i~~~~~-~~~~~---l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~ 402 (959)
|.+ ..| ..+.. ..+|++|++++|.+.... .+..+++|++|++++|++++..|..+..+++|++|++++|+++
T Consensus 315 ~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 390 (562)
T 3a79_B 315 QVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK 390 (562)
T ss_dssp CCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCC
T ss_pred cee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcC
Confidence 555 222 22222 256888888888876332 2257788888888888888778888888888888888888888
Q ss_pred CCC--CCccCCcccccccccCCccccCCCc-hhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCC
Q 002155 403 GKV--PTSFGNLKELTHLDLSFNELDGQLP-SSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGL 479 (959)
Q Consensus 403 ~~~--~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~ 479 (959)
+.. |..|.++++|++|++++|++++.+| ..+..+++|+.|++++|++++..
T Consensus 391 ~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-------------------------- 444 (562)
T 3a79_B 391 NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV-------------------------- 444 (562)
T ss_dssp BTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGG--------------------------
T ss_pred CcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcch--------------------------
Confidence 533 4568888888999999998887444 45778888888888888876422
Q ss_pred CccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCC
Q 002155 480 PRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR 553 (959)
Q Consensus 480 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 553 (959)
|..+. ++|+.|+|++|+++ .+|..+..+++|++|+|++|+|+++.+..+..+++|+.|++++|++.+..+.
T Consensus 445 ~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 445 FRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp GSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred hhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 12221 57888999999888 7888777899999999999999854444488899999999999999876654
No 45
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.3e-43 Score=413.13 Aligned_cols=253 Identities=23% Similarity=0.353 Sum_probs=209.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++........+.+.+|+++|+.++|||||+++++|.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 368999999999999999999875 6999999999776666667789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC--CcEEEccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE--FEAKVADFGLARLISA 834 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfg~~~~~~~ 834 (959)
|+||+|.+++.... ..+++.++..++.||+.||+||| ++||+||||||+|||++.+ +.+||+|||+|+....
T Consensus 236 ~~gg~L~~~i~~~~---~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 236 MSGGELFEKVADEH---NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCBHHHHHTCTT---SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred cCCCcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 99999999997543 35889999999999999999999 8999999999999999854 8999999999987753
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. ......+||+.|||||++.+..|+.++||||+||++|||++|.+||...... .....+...... +.+
T Consensus 310 ~--~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--------~~~~~i~~~~~~--~~~ 377 (573)
T 3uto_A 310 K--QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--------ETLRNVKSCDWN--MDD 377 (573)
T ss_dssp T--SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCCC--CCS
T ss_pred C--CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHhCCCC--CCc
Confidence 2 2234468999999999999999999999999999999999999999653221 122222222111 111
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ......+.+++.+||+.||++|||++|++++
T Consensus 378 ~~~----~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 378 SAF----SGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp GGG----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc----cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111 1123457789999999999999999999874
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=8.9e-41 Score=386.39 Aligned_cols=378 Identities=20% Similarity=0.201 Sum_probs=256.1
Q ss_pred EecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccc-cCCcccccCCCCceeeecccc
Q 002155 47 LLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTG-TIEGVFEKCSNLSQLVIFRNH 125 (959)
Q Consensus 47 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~ 125 (959)
++.+++++. .+|. + .++|++|+|++|.+++..|..|.++++|++|++++|.+.+ +.+..|.++++|++|+|++|.
T Consensus 15 ~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~ 90 (455)
T 3v47_A 15 AICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90 (455)
T ss_dssp EECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCT
T ss_pred cCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCc
Confidence 444444444 4443 1 1445555555555554445555555555555555555542 223445555555555555555
Q ss_pred cccccCcccCCC-cccEEeccCCccccccCcc--cccccceeEEEccccccccccCcc-ccCCcCCceEeccCCcccccC
Q 002155 126 IYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVS--IWNSETLMEFSAANNLLEGSLPYE-VGNAAALERLVLTNNMLKGHL 201 (959)
Q Consensus 126 ~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~--~~~~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~L~~n~i~~~~ 201 (959)
+.+..|..+..+ +|++|++++|++++..|.. +..+++|++|++++|.+++..|.. |.++++|++|+|++|.+++..
T Consensus 91 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 170 (455)
T 3v47_A 91 FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSIC 170 (455)
T ss_dssp TCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCC
T ss_pred cCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccC
Confidence 554445444444 2555555555555433332 666666666777777666555554 677777777777777777777
Q ss_pred CccccCC--CCCCEEEccCCcCCccCCcc--------ccCCCCCCEEEcccccCCCCCchhhhcc---cCCCeeEccccc
Q 002155 202 PKEIGNL--SALSVLDLNSNLFDGIIPYE--------LGDCISLTTLDLGNNNLSGLIPEKIADL---AQLQCLVLSHNN 268 (959)
Q Consensus 202 ~~~~~~l--~~L~~L~L~~N~i~~~~~~~--------~~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~ 268 (959)
+..+..+ .+|+.|++++|.+....+.. +..+++|++|++++|++++..|..+..+ ++|+.|++++|.
T Consensus 171 ~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~ 250 (455)
T 3v47_A 171 EEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSY 250 (455)
T ss_dssp TTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCT
T ss_pred hhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccc
Confidence 7777665 67778888888777554433 2356788888999888887777777665 788889988887
Q ss_pred CCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCC--cccccEEEccCCcCcccCCccccCCCCCCEE
Q 002155 269 LSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGS--CVVVVDLLLNNNMLSGKIPGSLSRLTNLTTL 346 (959)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~--~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 346 (959)
+.+.. +..+.+.+..+..+.. .++|+.|++++|.+++..|..|..+++|++|
T Consensus 251 ~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 304 (455)
T 3v47_A 251 NMGSS--------------------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQL 304 (455)
T ss_dssp TTSCC--------------------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred ccccc--------------------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEE
Confidence 65321 1112222222223332 2578888888888888888888888888888
Q ss_pred EccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCcccc
Q 002155 347 DLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD 426 (959)
Q Consensus 347 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 426 (959)
++++|++++..|..|..+++|+.|++++|.+++..+..+..+++|++|+|++|++++..|..|.++++|++|++++|+++
T Consensus 305 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 384 (455)
T 3v47_A 305 TLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK 384 (455)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccc
Confidence 88888888877888888888888888888888777888888888888888888888777888888888888888888888
Q ss_pred CCCchhhhcccccceEeeccccccCCcc
Q 002155 427 GQLPSSLSNILNLVGLYLQHNKLSGPVD 454 (959)
Q Consensus 427 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 454 (959)
+..+..+..+++|+.|++++|++++..+
T Consensus 385 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 385 SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 7666777888888888888888876544
No 47
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=366.61 Aligned_cols=260 Identities=25% Similarity=0.430 Sum_probs=212.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.++||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 357888999999999999999875 6899999998776667778899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.++++... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.++......
T Consensus 89 ~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 89 IKGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp CTTCBHHHHHHHCC---TTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 99999999998744 35899999999999999999999 8899999999999999999999999999998664322
Q ss_pred ccc-------------cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh
Q 002155 837 THV-------------STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 837 ~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
... .....||+.|+|||++.+..++.++||||+|+++|||++|..||............. .....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~--~~~~~ 240 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN--VRGFL 240 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC--HHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh--hhccc
Confidence 111 114579999999999999999999999999999999999999986543322111110 11111
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
... .+ ..+...+.+++.+||+.||++|||++++++.|++++.
T Consensus 241 ~~~------~~-------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 241 DRY------CP-------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp HHT------CC-------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccc------CC-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 110 01 1112357889999999999999999999999998863
No 48
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.5e-41 Score=365.35 Aligned_cols=251 Identities=23% Similarity=0.385 Sum_probs=208.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999986 46899999998766666667789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.+++... .+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 99 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 9999999999764 3788999999999999999999 8899999999999999999999999999998765432
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......... ......
T Consensus 171 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~~~~~-~~~~~~--- 238 (297)
T 3fxz_A 171 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNG-TPELQN--- 238 (297)
T ss_dssp C-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHHC-SCCCSC---
T ss_pred c-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCC-CCCCCC---
Confidence 2 234457999999999999999999999999999999999999999643211 1111111111 111111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+......+.+++.+||+.||++|||++|++++
T Consensus 239 ----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 239 ----PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 12233467889999999999999999999874
No 49
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.6e-40 Score=380.69 Aligned_cols=419 Identities=23% Similarity=0.277 Sum_probs=184.2
Q ss_pred CCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCcee
Q 002155 40 NWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQL 119 (959)
Q Consensus 40 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 119 (959)
..++|++|++++|++ +.+|++++++++|++|++++|++++.+|..++.+++|+.+++++|.. .++++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 346677777777777 57777777777777777777777777777777777664444443321 234444
Q ss_pred eecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccc
Q 002155 120 VIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKG 199 (959)
Q Consensus 120 ~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 199 (959)
++++|.+.+. |... .+|++|++++|++++ +|.. .++|++|++++|++++ +|.. .++|++|++++|++++
T Consensus 77 ~l~~~~l~~l-p~~~--~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~ 145 (454)
T 1jl5_A 77 ELNNLGLSSL-PELP--PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK 145 (454)
T ss_dssp ECTTSCCSCC-CSCC--TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS
T ss_pred EecCCccccC-CCCc--CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC
Confidence 4444444432 2111 235555555555554 3322 2455566666665552 2211 1567777777777774
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcc
Q 002155 200 HLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSS 279 (959)
Q Consensus 200 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 279 (959)
+| +|+++++|++|++++|.+++ +|..+ .+|++|++++|+++++ | .|+.+++|+.|++++|++++ +|..
T Consensus 146 -lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~-l~~~--- 213 (454)
T 1jl5_A 146 -LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKK-LPDL--- 213 (454)
T ss_dssp -CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSS-CCCC---
T ss_pred -Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCc-CCCC---
Confidence 55 47777777777777777774 44332 4677777777777763 4 47777777777777777663 2211
Q ss_pred hhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCC
Q 002155 280 YFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPS 359 (959)
Q Consensus 280 ~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 359 (959)
..+|+.|++++|.++ .+| .++.+++|+.|++++|++++. |. .+++|++|++++|++++ +|.
T Consensus 214 ------------~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l-~~---~~~~L~~L~l~~N~l~~-l~~ 274 (454)
T 1jl5_A 214 ------------PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTL-PD---LPPSLEALNVRDNYLTD-LPE 274 (454)
T ss_dssp ------------CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSC-CS---CCTTCCEEECCSSCCSC-CCC
T ss_pred ------------cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcc-cc---cccccCEEECCCCcccc-cCc
Confidence 124455555555555 344 255555555555555555532 22 12555666666666553 232
Q ss_pred CcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCc-ccccccccCCccccCCCchhhhcccc
Q 002155 360 EFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNL-KELTHLDLSFNELDGQLPSSLSNILN 438 (959)
Q Consensus 360 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~l~~l~~ 438 (959)
. .++|+.|++++|++++. |.. .++|++|++++|++++. + .+ ++|++|++++|++++ +|.. +++
T Consensus 275 ~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~ 338 (454)
T 1jl5_A 275 L---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPR 338 (454)
T ss_dssp C---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTT
T ss_pred c---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCc
Confidence 2 24555555555555531 110 13455555555555431 1 11 245555555555543 3322 244
Q ss_pred cceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccc--cCCcCCcCCCCCcEE
Q 002155 439 LVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTG--EIPPDLGNLMQLEYL 516 (959)
Q Consensus 439 L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L 516 (959)
|+.|++++|+++++ |. .+++|++|++++|++++ .+|.++..
T Consensus 339 L~~L~L~~N~l~~l---------------------------p~---~l~~L~~L~L~~N~l~~l~~ip~~l~~------- 381 (454)
T 1jl5_A 339 LERLIASFNHLAEV---------------------------PE---LPQNLKQLHVEYNPLREFPDIPESVED------- 381 (454)
T ss_dssp CCEEECCSSCCSCC---------------------------CC---CCTTCCEEECCSSCCSSCCCCCTTCCE-------
T ss_pred CCEEECCCCccccc---------------------------cc---hhhhccEEECCCCCCCcCCCChHHHHh-------
Confidence 44444444444433 32 24556666666666664 34444332
Q ss_pred eCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCC
Q 002155 517 DVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLC 572 (959)
Q Consensus 517 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c 572 (959)
|+.|.+.+.+|.. +++|++|++++|++++.+.-. ..+..+.+.+|...|
T Consensus 382 -L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP---~sl~~L~~~~~~~~~ 430 (454)
T 1jl5_A 382 -LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIP---ESVEDLRMNSERVVD 430 (454)
T ss_dssp -EECCC--------------------------------------------------
T ss_pred -hhhcccccccccc---cCcCCEEECCCCcCCccccch---hhHhheeCcCcccCC
Confidence 2234444444442 356667777777776532111 234555555555444
No 50
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.8e-40 Score=381.05 Aligned_cols=358 Identities=22% Similarity=0.177 Sum_probs=168.1
Q ss_pred cccEEeccCCccccccCcccccccceeEEEcccccccccc-CccccCCcCCceEeccCCcccccCCccccCCCCCCEEEc
Q 002155 138 PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL-PYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDL 216 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 216 (959)
.+++|++++|++++..|..|.++++|++|++++|.+.+.+ +..|.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 31 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 110 (455)
T 3v47_A 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTL 110 (455)
T ss_dssp TCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEEC
T ss_pred ccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeC
Confidence 3555555555555544555555555555555555443222 334444555555555555544444444445555555555
Q ss_pred cCCcCCccCCcc--ccCCCCCCEEEcccccCCCCCchh-hhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccc
Q 002155 217 NSNLFDGIIPYE--LGDCISLTTLDLGNNNLSGLIPEK-IADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQ 293 (959)
Q Consensus 217 ~~N~i~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~ 293 (959)
++|.+++..+.. +..+++|++|+|++|++++..|.. |..+++|++|++++|+++
T Consensus 111 ~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~----------------------- 167 (455)
T 3v47_A 111 TQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK----------------------- 167 (455)
T ss_dssp TTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS-----------------------
T ss_pred CCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc-----------------------
Confidence 555444322222 444444455555444444443333 444444444444444443
Q ss_pred cccceecCCCcCCCCCCcccCCc--ccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEE
Q 002155 294 HHGVFDLSYNRLSGPIPEELGSC--VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLY 371 (959)
Q Consensus 294 ~L~~l~L~~n~l~~~~p~~~~~~--~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 371 (959)
+..+..+..+ ..++.|++++|.+.+..+..+.. .....+..+++|+.|+
T Consensus 168 -------------~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~ 218 (455)
T 3v47_A 168 -------------SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLD 218 (455)
T ss_dssp -------------CCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEE
T ss_pred -------------ccChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEe
Confidence 2333333332 34555555555555433322110 0000112334555555
Q ss_pred eeCcccCCccccccccC---CCCcEEEccCCcCCC----------CCCCccCCc--ccccccccCCccccCCCchhhhcc
Q 002155 372 LGNNQLTGSIPWSLGSL---GGLVKLNLTGNKLSG----------KVPTSFGNL--KELTHLDLSFNELDGQLPSSLSNI 436 (959)
Q Consensus 372 L~~n~l~~~~~~~~~~l---~~L~~L~L~~N~i~~----------~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~l~~l 436 (959)
+++|++++..|..+... ++|+.|++++|.+.+ ..+..+..+ ++|++|++++|.+++..|..+..+
T Consensus 219 Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 298 (455)
T 3v47_A 219 LSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHF 298 (455)
T ss_dssp CTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTC
T ss_pred cCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccC
Confidence 55555554444444332 455555555554332 111222222 345555555555555555555555
Q ss_pred cccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEE
Q 002155 437 LNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYL 516 (959)
Q Consensus 437 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 516 (959)
++|+.|++++|++++++ |..|.++++|++|+|++|++++..|..+..+++|++|
T Consensus 299 ~~L~~L~Ls~n~l~~~~--------------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 352 (455)
T 3v47_A 299 TDLEQLTLAQNEINKID--------------------------DNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVL 352 (455)
T ss_dssp TTCCEEECTTSCCCEEC--------------------------TTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEE
T ss_pred CCCCEEECCCCcccccC--------------------------hhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEE
Confidence 55555555555555433 3344445555555555555554444455555555555
Q ss_pred eCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCccccccCCCCCCC
Q 002155 517 DVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCG 573 (959)
Q Consensus 517 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 573 (959)
+|++|++++..|..|..+++|++|++++|+++++++.. ..+++|+.+++++|++.|+
T Consensus 353 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 353 DLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 55555555444555555555555555555555544433 3344555555555555553
No 51
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.2e-40 Score=381.54 Aligned_cols=400 Identities=26% Similarity=0.273 Sum_probs=219.3
Q ss_pred CCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEe
Q 002155 64 NCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLD 143 (959)
Q Consensus 64 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ 143 (959)
..++|++|++++|.+ +.+|.+|+++++|++|++++|.+++..|..++++++|+.+++..|.. ..+++|+
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~----------~~l~~L~ 77 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD----------RQAHELE 77 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH----------HTCSEEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc----------cCCCEEE
Confidence 468899999999999 58888899999999999999999988888888888888888877753 2477888
Q ss_pred ccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCc
Q 002155 144 LDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDG 223 (959)
Q Consensus 144 ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~ 223 (959)
+++|++++. |.. .++|++|++++|.+++ +|.. +++|++|++++|++++ ++.. .++|++|++++|.+++
T Consensus 78 l~~~~l~~l-p~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~ 145 (454)
T 1jl5_A 78 LNNLGLSSL-PEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK 145 (454)
T ss_dssp CTTSCCSCC-CSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS
T ss_pred ecCCccccC-CCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC
Confidence 888888753 321 2456666666666553 4432 2455555555555553 2211 1455555555555553
Q ss_pred cCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCC
Q 002155 224 IIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYN 303 (959)
Q Consensus 224 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n 303 (959)
+| .++++++|++|++++|+++++ |.. ..+|++|++++|
T Consensus 146 -lp-~~~~l~~L~~L~l~~N~l~~l-p~~---~~~L~~L~L~~n------------------------------------ 183 (454)
T 1jl5_A 146 -LP-ELQNSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNN------------------------------------ 183 (454)
T ss_dssp -CC-CCTTCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSS------------------------------------
T ss_pred -Cc-ccCCCCCCCEEECCCCcCccc-CCC---cccccEEECcCC------------------------------------
Confidence 33 355555555555555555532 221 134455555554
Q ss_pred cCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCcccc
Q 002155 304 RLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPW 383 (959)
Q Consensus 304 ~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 383 (959)
.+++ +| .++.+++|+.|++++|++++ +|.. .++|++|++++|.++ .+| .+..+++|+.|++++|++++ +|.
T Consensus 184 ~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~ 254 (454)
T 1jl5_A 184 QLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPD 254 (454)
T ss_dssp CCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCS
T ss_pred cCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-ccc
Confidence 4443 33 35566666666666666664 2222 246777777777776 344 36677777777777777764 333
Q ss_pred ccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhh
Q 002155 384 SLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAW 463 (959)
Q Consensus 384 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 463 (959)
. +++|++|++++|++++ +|.. .++|++|++++|++++ +|.. .++|+.|++++|++++++.. . .
T Consensus 255 ~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~i~~~-~-----~ 317 (454)
T 1jl5_A 255 L---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRSLCDL-P-----P 317 (454)
T ss_dssp C---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSEECCC-C-----T
T ss_pred c---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCcccCC-c-----C
Confidence 2 3667777777777774 3433 2567777777777764 1211 15677777777777754321 0 1
Q ss_pred hhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCC--CCCccccCCCCccEEe
Q 002155 464 KIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCG--QIPETMCSLSNLLYLS 541 (959)
Q Consensus 464 ~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ 541 (959)
.++.|++++|.+++ +|.. +++|++|++++|+++ .+|. .+++|++|++++|++++ .+|..+..
T Consensus 318 ~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~-------- 381 (454)
T 1jl5_A 318 SLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED-------- 381 (454)
T ss_dssp TCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------
T ss_pred cCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------
Confidence 57777778877775 4543 578999999999998 5676 46889999999999987 56665543
Q ss_pred cccCcCcccCCCCcccCCCccccccCCCCCC
Q 002155 542 LAENRLEGMVPRSGICQNLSKISLTGNKDLC 572 (959)
Q Consensus 542 l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c 572 (959)
++.|.+.+.+|.. +.+|+.+++++|+...
T Consensus 382 L~~n~~~~~i~~~--~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 382 LRMNSHLAEVPEL--PQNLKQLHVETNPLRE 410 (454)
T ss_dssp EECCC--------------------------
T ss_pred hhhcccccccccc--cCcCCEEECCCCcCCc
Confidence 3456777766653 5789999999998654
No 52
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.2e-40 Score=358.12 Aligned_cols=283 Identities=37% Similarity=0.621 Sum_probs=227.5
Q ss_pred CccccCHHHHHHHhcCCCCC------CeeccCCCeEEEEEEcCCCCEEEEEEcccc----chhhHHHHHHHHHHHhcCCC
Q 002155 665 PLMRLTLVHILEATNNFCKT------NIIGDGGFGTVYKAALPDGKTVAVKKLSQA----KTQGHREFTAEMETLGKVKH 734 (959)
Q Consensus 665 ~~~~~~~~~~~~~~~~f~~~------~~lg~G~~g~V~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h 734 (959)
+...++..++..++++|... +.||+|+||.||+|+. +++.||||++... .....+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 44568889999999998877 8999999999999997 6889999998643 23345678899999999999
Q ss_pred CceeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEE
Q 002155 735 QNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNIL 814 (959)
Q Consensus 735 ~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 814 (959)
|||+++++++..++..++||||+++++|.+++..... ...+++..++.++.|++.||+||| +.|++||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEE
Confidence 9999999999999999999999999999999976432 235899999999999999999999 889999999999999
Q ss_pred ECCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC
Q 002155 815 LNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG 893 (959)
Q Consensus 815 l~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~ 893 (959)
++.++.+||+|||.+......... ......||+.|+|||.+.+ .++.++||||+|+++|||++|..||........
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-- 242 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-- 242 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--
Confidence 999999999999999765432221 2234578999999998764 588999999999999999999999976433221
Q ss_pred chHHHHHHHhhcC--ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 894 NLVGWVFQKMKKG--QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 894 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
... +....... ......++ ............+.+++.+||+.||++|||+++++++|+++..
T Consensus 243 -~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 243 -LLD-IKEEIEDEEKTIEDYIDK-KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp -TTH-HHHHHHTTSCCHHHHSCS-SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred -HHH-HHHHhhhhhhhhhhhccc-cccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 111 11221111 11122222 2234466778889999999999999999999999999999864
No 53
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.3e-41 Score=369.39 Aligned_cols=267 Identities=25% Similarity=0.354 Sum_probs=208.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCC----ceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE----EKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv 753 (959)
.++|++.++||+|+||.||+|++. ++.||||++..... ....+..|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467889999999999999999985 78999999865433 2344567999999999999999999997754 36999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC----------CeEeCCCCCCCEEECCCCcEEE
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP----------HIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~----------~ivH~dlk~~Nill~~~~~~kl 823 (959)
|||+++|+|.++++.. .+++..++.++.|++.|++||| +. ||+||||||+||+++.++.+||
T Consensus 101 ~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 9999999999999764 3899999999999999999999 77 9999999999999999999999
Q ss_pred ccccccccccccccc-ccccccccccccCCCcCCCC-----CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC----
Q 002155 824 ADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSG-----RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG---- 893 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~---- 893 (959)
+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..........
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 999999876543222 22335789999999988763 45678899999999999999999997643321110
Q ss_pred ----chHHHHHHHhhcCccccccCccccC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 894 ----NLVGWVFQKMKKGQAADVLDPTVLT-ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 894 ----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.....+......... .+.... .........+.+++.+||+.||++|||++|+++.|++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccCCchhhhhhhhhcccC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 011111111111111 111111 1123456678999999999999999999999999999863
No 54
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8.4e-41 Score=357.26 Aligned_cols=257 Identities=26% Similarity=0.425 Sum_probs=212.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|+++++..||+|++..... ..+++.+|++++++++||||+++++++..++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467889999999999999999998888999999875432 3466889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... ..+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+........
T Consensus 86 ~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 86 SNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp TTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred CCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999999998754 35899999999999999999999 88999999999999999999999999999987654433
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......+|+.|+|||.+.+..++.++||||+|+++|||++ |..||...... .....+..... ...+.
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~--~~~~~- 228 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--------EVVLKVSQGHR--LYRPH- 228 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCC--CCCCT-
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--------HHHHHHHcCCC--CCCCC-
Confidence 33344456788999999988889999999999999999999 99998643211 11122222111 11111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.....+.+++.+||+.||++|||++|++++|++++.
T Consensus 229 ------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 229 ------LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp ------TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred ------cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 122367889999999999999999999999999864
No 55
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.8e-41 Score=374.96 Aligned_cols=260 Identities=30% Similarity=0.466 Sum_probs=210.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC--------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD 747 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 747 (959)
.++|++.+.||+|+||.||+|++. ++..||||++.... ....+.+.+|+.+++.+ +||||+++++++..+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467889999999999999999852 35679999997543 34456789999999999 899999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTG------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
+..|+||||+++|+|.++++.... ....+++.+++.++.||+.||+||| +.||+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 999999999999999999987542 1235789999999999999999999 8899999999999999
Q ss_pred CCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCC
Q 002155 816 NEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGG 893 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 893 (959)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---- 312 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---- 312 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----
Confidence 99999999999999866433221 2233457889999999998999999999999999999999 99998643211
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. +...+..+... . .+..+...+.+++.+||+.||++||++.|+++.|+++.
T Consensus 313 ~----~~~~~~~~~~~-----~----~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 313 E----LFKLLKEGHRM-----D----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp G----HHHHHHTTCCC-----C----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H----HHHHHhcCCCC-----C----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 22222222111 1 11123346888999999999999999999999999874
No 56
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.3e-41 Score=361.79 Aligned_cols=257 Identities=28% Similarity=0.463 Sum_probs=212.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ..+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 357888999999999999999998889999999875432 3467889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... ..+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.++.......
T Consensus 88 ~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 88 EHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp TTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCcHHHHHHhcC---cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 9999999997654 35889999999999999999999 88999999999999999999999999999987654333
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......+++.|+|||.+.+..++.++||||+|+++|||++ |..||...... .....+..... ...+
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--------~~~~~~~~~~~--~~~~-- 229 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGFR--LYKP-- 229 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCC--CCCC--
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHhcCcc--CCCC--
Confidence 33344567789999999988899999999999999999999 99998643211 12222222211 1111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
......+.+++.+||+.||++||+++|++++|+++..
T Consensus 230 -----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 230 -----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 1123467889999999999999999999999999864
No 57
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.8e-40 Score=361.64 Aligned_cols=258 Identities=30% Similarity=0.480 Sum_probs=201.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++ +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 46788899999999999999987 58899999986543 3345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|+++|+|.+++.... ....+++..++.++.|++.||+||| +.| |+||||||+||+++.++.+||+|||+++...
T Consensus 115 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 115 YLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp CCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred cCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 999999999997643 1234889999999999999999999 888 9999999999999999999999999997543
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+..... .
T Consensus 191 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-------~-~~~~~~~~~~----~ 257 (309)
T 3p86_A 191 ST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-------Q-VVAAVGFKCK----R 257 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-------H-HHHHHHHSCC----C
T ss_pred cc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHHhcCC----C
Confidence 22 12233457899999999999999999999999999999999999998653211 1 1111111100 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.. .+......+.+++.+||+.||++|||++++++.|+++.
T Consensus 258 ~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 258 LE----IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp CC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 01 11123346788999999999999999999999999874
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=366.71 Aligned_cols=251 Identities=24% Similarity=0.374 Sum_probs=197.4
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
..++|++.+.||+|+||+||+|++ .+|+.||||++.... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 357899999999999999999986 478999999986543 233456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 88 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999997754 5899999999999999999999 88999999999999999999999999999976554
Q ss_pred ccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
..........||+.|+|||++.+..+ +.++||||+||++|||++|..||.... ... ....+..+... .
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-------~~~-~~~~i~~~~~~---~ 229 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-------VMA-LYKKIMRGKYD---V 229 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-------HHH-HHHHHHHTCCC---C
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-------HHH-HHHHHHcCCCC---C
Confidence 33333445679999999999888775 889999999999999999999996431 111 22222222111 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
| ......+.+++.+||+.||++|||++|++++
T Consensus 230 p-------~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 230 P-------KWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp C-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred C-------CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1 1122356789999999999999999999875
No 59
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.3e-40 Score=365.06 Aligned_cols=248 Identities=25% Similarity=0.345 Sum_probs=205.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|++ .+|+.||||++... .....+.+.+|+++++.++||||+++++++..++..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35788999999999999999987 47999999998654 3344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 9999999999997764 4889999999999999999999 88999999999999999999999999999986643
Q ss_pred ccccccccccccccccCCCcCCCCCCC-CcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRST-TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. .......||+.|+|||++.+..++ .++||||+||++|||++|+.||..... . .....+..+... .
T Consensus 167 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~-~~~~~i~~~~~~---~ 233 (328)
T 3fe3_A 167 G--GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-------K-ELRERVLRGKYR---I 233 (328)
T ss_dssp S--CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-------H-HHHHHHHHCCCC---C
T ss_pred C--CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-------H-HHHHHHHhCCCC---C
Confidence 2 223456799999999998888775 789999999999999999999965321 1 122222222111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
| ......+.+++.+||+.||++|||++|++++
T Consensus 234 p-------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 P-------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp C-------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred C-------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 1123457789999999999999999999864
No 60
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.1e-40 Score=362.00 Aligned_cols=261 Identities=24% Similarity=0.336 Sum_probs=213.2
Q ss_pred ccCHHHHHHHhcC----------CCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc
Q 002155 668 RLTLVHILEATNN----------FCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN 736 (959)
Q Consensus 668 ~~~~~~~~~~~~~----------f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n 736 (959)
.++..++.++++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.+++.++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 4566777766653 666789999999999999976 79999999997666666677899999999999999
Q ss_pred eeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 737 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
|+++++++...+..++||||+++++|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~ 175 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLT 175 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEC
Confidence 999999999999999999999999999998753 4889999999999999999999 78999999999999999
Q ss_pred CCCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchH
Q 002155 817 EEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLV 896 (959)
Q Consensus 817 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~ 896 (959)
.++.+||+|||++....... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .
T Consensus 176 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-------~ 247 (321)
T 2c30_A 176 LDGRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-------V 247 (321)
T ss_dssp TTCCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------H
T ss_pred CCCcEEEeeeeeeeecccCc-cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------H
Confidence 99999999999998765322 223445799999999999999999999999999999999999999864321 1
Q ss_pred HHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 897 GWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ....+........ .........+.+++.+||+.||++|||++|++++
T Consensus 248 ~-~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 248 Q-AMKRLRDSPPPKL-------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp H-HHHHHHHSSCCCC-------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred H-HHHHHhcCCCCCc-------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 1222222111111 0111233467889999999999999999999875
No 61
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.2e-41 Score=362.47 Aligned_cols=260 Identities=25% Similarity=0.395 Sum_probs=206.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357889999999999999999865 6899999988543 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... .+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999998764 5889999999999999999999 8899999999999999999999999999998765
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
...........||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... .......+....
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-------~~~~~~~~~~~~------ 229 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA-------VSIAIKHIQDSV------ 229 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH-------HHHHHHHHSSCC------
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHhhccC------
Confidence 4333334455799999999999999999999999999999999999999965321 111122222111
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhh
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-TMLHVLKFLKEIK 957 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~ell~~L~~l~ 957 (959)
+........+....+.+++.+||+.||++|| +++++.+.|+++.
T Consensus 230 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 230 PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 1010111122345688899999999999998 9999999998764
No 62
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.1e-40 Score=361.73 Aligned_cols=266 Identities=26% Similarity=0.418 Sum_probs=208.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-----CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec--CCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-----PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF--DEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 750 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 36788899999999999999984 2688999999987766667789999999999999999999998854 3568
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++|+|.+++.... ..+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG---GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred EEEEEeCCCCCHHHHHHhcc---cccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 99999999999999998754 35889999999999999999999 8899999999999999999999999999998
Q ss_pred ccccccc--cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc--------cCCchHHHHH
Q 002155 831 LISACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI--------EGGNLVGWVF 900 (959)
Q Consensus 831 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~--------~~~~~~~~~~ 900 (959)
....... .......++..|+|||.+.+..++.++||||+|+++|||++|..||....... ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 7643222 11223457778999999988899999999999999999999999986432110 0001111112
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
..+..... ...+..+...+.+++.+||+.||++|||++|+++.|++++.
T Consensus 243 ~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 243 ELLKNNGR---------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHHTTCC---------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhccCc---------CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 22222111 11122234568889999999999999999999999999864
No 63
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7.2e-41 Score=367.75 Aligned_cols=257 Identities=26% Similarity=0.412 Sum_probs=207.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|++. .+..||||++... .....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 367888999999999999999974 3456999998754 34445678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.++++... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 999999999999997653 35889999999999999999999 889999999999999999999999999999876
Q ss_pred cccccc--ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 833 SACETH--VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 833 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
...... ......+|+.|+|||++.+..++.++||||+|+++|||++ |..||...... .+...+.....
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~~~~~~~~~- 272 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--------DVISSVEEGYR- 272 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------HHHHHHHTTCC-
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHcCCC-
Confidence 432221 1223346778999999988889999999999999999999 99998543211 12222222211
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+. ....+...+.+++.+||+.||++|||++|+++.|+++.
T Consensus 273 ----~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 273 ----LP----APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp ----CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CC----CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11 11223346888999999999999999999999999875
No 64
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.6e-41 Score=378.08 Aligned_cols=258 Identities=26% Similarity=0.394 Sum_probs=209.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 357888999999999999999986 68999999987543 2334568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++|+|.++++... ..+++.+++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 999999999998654 35889999999999999999999 889999999999999999999999999999764322
Q ss_pred ccccc-ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 836 ETHVS-TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 836 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
..... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||..... ..+...+..+...
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~---- 334 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--------QQTREFVEKGGRL---- 334 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--------HHHHHHHHTTCCC----
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCC----
Confidence 11111 11235778999999988889999999999999999998 9999864321 1122222222111
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. .+..+...+.+++.+||+.||++|||++++++.|++++.
T Consensus 335 -~----~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 335 -P----CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp -C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -C----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1 111233467889999999999999999999999999863
No 65
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.6e-40 Score=360.88 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=205.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.++||+|+||.||+|+.+ +|+.||+|++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367889999999999999999875 6899999998754 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++++||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999998654 5889999999999999999999 8899999999999999999999999999997643
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..+...+...... .
T Consensus 157 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~---~ 224 (337)
T 1o6l_A 157 SD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILMEEIR---F 224 (337)
T ss_dssp CT-TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCC---C
T ss_pred cC-CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCC---C
Confidence 22 2223456799999999999999999999999999999999999999864321 1122222221110 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
| ......+.+++.+||+.||++|| +++|++++
T Consensus 225 p-------~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 P-------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred C-------CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1 12234678899999999999999 89999865
No 66
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=357.84 Aligned_cols=273 Identities=21% Similarity=0.264 Sum_probs=213.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCC--ceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE--EKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv 753 (959)
.++|++.++||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357889999999999999999976 58999999987543 334566789999999999999999999987655 77999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE----CCCCcEEEcccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL----NEEFEAKVADFGLA 829 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~~ 829 (959)
|||+++++|.+++...... ..+++.+++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EECCTTCBHHHHHHSGGGT-TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EeCCCCCCHHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 9999999999999875422 23899999999999999999999 8899999999999999 78888999999999
Q ss_pred cccccccccccccccccccccCCCcCC--------CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQ--------SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+...... ......||+.|+|||++. +..++.++||||+||++|||++|+.||...............+..
T Consensus 164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred eecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 8765322 223457899999999865 577899999999999999999999999654333222222222222
Q ss_pred HhhcCcccc----------cc-CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 902 KMKKGQAAD----------VL-DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 902 ~~~~~~~~~----------~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
......... +. ...............+.+++.+||+.||++|||++|++++..+-
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 111100000 00 00111234577888899999999999999999999999998764
No 67
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8.4e-41 Score=360.39 Aligned_cols=256 Identities=24% Similarity=0.409 Sum_probs=208.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|++.++..||+|++..... ..+++.+|++++++++||||+++++++..++..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 467888999999999999999998888999999975432 3467889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... ..+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.......
T Consensus 102 ~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 102 ANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp TTCBHHHHHHCGG---GCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 9999999998643 35889999999999999999999 88999999999999999999999999999987654333
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... .....+..... ...+
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~--~~~~-- 243 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAEHIAQGLR--LYRP-- 243 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCC--CCCC--
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--------HHHHHHhcccC--CCCC--
Confidence 33334457789999999988889999999999999999998 99998643211 11222222211 1111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
......+.+++.+||+.||++|||++|++++|+++.
T Consensus 244 -----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 244 -----HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp -----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 111246788999999999999999999999999885
No 68
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.2e-40 Score=372.69 Aligned_cols=257 Identities=26% Similarity=0.443 Sum_probs=198.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|++. ++..||||++... .....+.+.+|+.++++++||||+++++++..++..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357999999999999999999864 5778999998754 33445678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.++++... ..+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 124 v~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 999999999999998653 35889999999999999999999 789999999999999999999999999999876
Q ss_pred ccccccc--cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 833 SACETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 833 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
....... .....+++.|+|||++.+..++.++|||||||++||+++ |+.||...... .+...+..+...
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--------~~~~~i~~~~~~ 269 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--------DVIKAVDEGYRL 269 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--------HHHHHHHTTEEC
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCC
Confidence 4322211 112235678999999988899999999999999999998 99998643211 122222222110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.....+...+.+++.+||+.||++||+++++++.|+++.
T Consensus 270 ---------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 270 ---------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp ---------CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 111223456889999999999999999999999999874
No 69
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8.8e-40 Score=362.65 Aligned_cols=252 Identities=23% Similarity=0.296 Sum_probs=205.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh------hHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ------GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++...... ..+.+.+|+.++++++||||+++++++..++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467899999999999999999875 6899999998754321 346788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC----cEEEccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF----EAKVADF 826 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Df 826 (959)
++||||+++|+|.+++.... .+++..+..++.||+.|++||| +.||+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS----CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999997643 5889999999999999999999 88999999999999998876 7999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
|++...... .......||+.|+|||++.+..++.++||||+||++|+|++|..||...... .....+...
T Consensus 164 G~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--------~~~~~i~~~ 233 (361)
T 2yab_A 164 GLAHEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITAV 233 (361)
T ss_dssp SSCEECCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTT
T ss_pred CCceEcCCC--CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhc
Confidence 999876532 2234457999999999999989999999999999999999999999653211 112222221
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. .+++.... .....+.+++.+||..||++|||++|++++
T Consensus 234 ~~--~~~~~~~~----~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 234 SY--DFDEEFFS----QTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp CC--CCCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CC--CCCchhcc----CCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11 01111111 123457789999999999999999999863
No 70
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.8e-40 Score=367.09 Aligned_cols=256 Identities=21% Similarity=0.309 Sum_probs=203.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.++||+|+||+||+|+.+ +++.||+|++++.. ....+.+..|..++.++ +||||+++++++.+++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999876 57899999987543 22234577899999887 89999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+|||++.++++||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 999999999999998754 5899999999999999999999 889999999999999999999999999999753
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc-cCCchHHHHHHHhhcCccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI-EGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.. ........+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........+.+.+......
T Consensus 204 ~~-~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~-- 280 (396)
T 4dc2_A 204 LR-PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-- 280 (396)
T ss_dssp CC-TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC--
T ss_pred cc-CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC--
Confidence 32 2223345689999999999999999999999999999999999999996432211 1122223333333332111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM------LHVLK 951 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~ell~ 951 (959)
. +......+.+++.+||+.||++||++ +|+++
T Consensus 281 -~-------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 281 -I-------PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp -C-------CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred -C-------CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 0 11133467889999999999999986 56655
No 71
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.8e-40 Score=358.32 Aligned_cols=263 Identities=24% Similarity=0.327 Sum_probs=202.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||+||+|++.+|+.||+|++.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46789999999999999999999889999999986543 2234568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++ ++.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FMEK-DLKKVLDENK---TGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCSE-EHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCCC-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9985 8888887644 35889999999999999999999 889999999999999999999999999999876432
Q ss_pred cccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc---
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV--- 911 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 911 (959)
. .......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....+...........+
T Consensus 173 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~ 247 (311)
T 3niz_A 173 V-RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD----DQLPKIFSILGTPNPREWPQV 247 (311)
T ss_dssp C-C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT----THHHHHHHHHCCCCTTTSGGG
T ss_pred c-ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHHCCCChHHhhhh
Confidence 2 22234568999999998766 56899999999999999999999999654322 222222222211111100
Q ss_pred -------------cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 -------------LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 -------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
................+.+++.+||+.||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00000000011123467899999999999999999999874
No 72
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.9e-40 Score=365.87 Aligned_cols=256 Identities=25% Similarity=0.318 Sum_probs=205.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-----hhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-----TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
.++|++.+.||+|+||.||+|+.+ +++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 357899999999999999999865 68999999986432 123567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc---EEEccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE---AKVADFGL 828 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~ 828 (959)
+||||+++|+|.+++.........+++..++.++.||+.||+||| +.||+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999888765433345899999999999999999999 889999999999999986654 99999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
+....... .......||+.|+|||++.+..++.++||||+||++|||++|..||..... .....+.....
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~i~~~~~ 249 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---------RLFEGIIKGKY 249 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---------HHHHHHHHTCC
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---------HHHHHHHcCCC
Confidence 98765322 223445799999999999999999999999999999999999999965311 11222222111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ..+.... .....+.+++.+||+.||++|||+.|++++
T Consensus 250 ~--~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 K--MNPRQWS----HISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp C--CCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C--CCccccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 1111001 123467889999999999999999999863
No 73
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.5e-40 Score=359.45 Aligned_cols=246 Identities=22% Similarity=0.340 Sum_probs=201.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|++ .+++.||||++.... ......+.+|+.+++.++||||+++++++..++..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788999999999999999996 478999999986432 223457889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+ +|+|.+++.... .+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 89 E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred ECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 999 679999887654 5889999999999999999999 78999999999999999999999999999986643
Q ss_pred ccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||......... ..+... ..
T Consensus 161 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~--------~~i~~~---~~-- 225 (336)
T 3h4j_B 161 G--NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF--------KKVNSC---VY-- 225 (336)
T ss_dssp S--BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB--------CCCCSS---CC--
T ss_pred C--cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH--------HHHHcC---CC--
Confidence 2 22344579999999999988776 78999999999999999999999654222100 000000 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+......+.+++.+||+.||.+|||++|++++
T Consensus 226 -----~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 226 -----VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp -----CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred -----CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 0111233467889999999999999999999864
No 74
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.2e-39 Score=355.01 Aligned_cols=260 Identities=28% Similarity=0.448 Sum_probs=201.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|.+.++||+|+||.||+|++. ..+|+|+++.. .....+.+.+|+.++++++||||+++++++. ++..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 357888999999999999999874 46899987643 3344567889999999999999999999875 556899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred cCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 999999999997544 35889999999999999999999 789999999999999999999999999999765321
Q ss_pred -cccccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 836 -ETHVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 836 -~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.........||+.|+|||++. +..++.++|||||||++|||++|+.||...... ..+...+........
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~-------~~~~~~~~~~~~~~~ 258 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-------DQIIFMVGRGYASPD 258 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHHHHHHHTCCCCC
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH-------HHHHHHHhcCCCCcc
Confidence 122233457899999999875 567889999999999999999999999653221 111222222111111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.......+...+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 259 -----~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 259 -----LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp -----STTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred -----hhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 111112234568889999999999999999999999998853
No 75
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=369.81 Aligned_cols=254 Identities=24% Similarity=0.324 Sum_probs=205.7
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
-.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3567999999999999999999864 68999999986543 33456688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC---CCCcEEEccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN---EEFEAKVADFGLAR 830 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~ 830 (959)
|||+++|+|.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++ .++.+||+|||++.
T Consensus 89 ~E~~~gg~L~~~i~~~~----~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 99999999999998754 5889999999999999999999 88999999999999998 46789999999997
Q ss_pred ccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
...... .......||+.|+|||++.+..++.++||||+||++|+|++|.+||..... ..+...+..+....
T Consensus 162 ~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~~~~~~~ 232 (444)
T 3soa_A 162 EVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--------HRLYQQIKAGAYDF 232 (444)
T ss_dssp CCCTTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCC
T ss_pred EecCCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHhCCCCC
Confidence 765322 223446799999999999998999999999999999999999999864321 11223333222111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ .+........+.+++.+||+.||++|||++|++++
T Consensus 233 ---~---~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 ---P---SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---C---TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---C---ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 11112233467889999999999999999999874
No 76
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=9.7e-40 Score=355.57 Aligned_cols=264 Identities=27% Similarity=0.397 Sum_probs=202.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhc--CCCCceeccccceec----CCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGK--VKHQNLVPLLGYCSF----DEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~----~~~~~ 751 (959)
.++|++.+.||+|+||.||+|++ +++.||||++.... ...+..|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46899999999999999999998 68999999986532 3345556666655 799999999998644 34579
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF-----TPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
+||||+++|+|.++++.. .+++..++.++.|++.|++|||... +.+|+||||||+||+++.++.+||+||
T Consensus 83 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred EehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeC
Confidence 999999999999999643 4899999999999999999999321 469999999999999999999999999
Q ss_pred ccccccccccccc---cccccccccccCCCcCCCC------CCCCcCcchhHHHHHHHHHhC----------CCCCCCCC
Q 002155 827 GLARLISACETHV---STDIAGTFGYIPPEYGQSG------RSTTRGDVYSFGVILLELVTG----------KEPTGPEF 887 (959)
Q Consensus 827 g~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg----------~~p~~~~~ 887 (959)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9997654332221 2334789999999988776 445789999999999999999 77775433
Q ss_pred ccccCCchHHHHHHHhhcCccccccCcccc-CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 888 KDIEGGNLVGWVFQKMKKGQAADVLDPTVL-TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.... ............. ..+... ..........+.+++.+||+.||++|||++|+++.|+++.
T Consensus 238 ~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 301 (301)
T 3q4u_A 238 PNDP---SFEDMRKVVCVDQ----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301 (301)
T ss_dssp CSSC---CHHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCc---chhhhhHHHhccC----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhccC
Confidence 3211 1111222221111 111111 1122356678999999999999999999999999999873
No 77
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=369.23 Aligned_cols=261 Identities=29% Similarity=0.399 Sum_probs=209.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +++.||||++... .......+.+|+.++++++||||+++++++..+...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 367888999999999999999853 4678999998654 344455688999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCC---ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC---cEEEc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF---EAKVA 824 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~ 824 (959)
++||||+++|+|.++++..... ...+++.+++.++.|+++||+||| +.||+||||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 9999999999999999876532 235889999999999999999999 88999999999999999554 59999
Q ss_pred ccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHH
Q 002155 825 DFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 825 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||..... ..+...
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--------~~~~~~ 298 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVLEF 298 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHH
Confidence 9999976533222 22233467899999999988899999999999999999998 9999864321 112222
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+..+.... ....+...+.+++.+||+.||++||++.+++++|+.+..
T Consensus 299 i~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 299 VTSGGRMD---------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcCCCCC---------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 22221111 111223467889999999999999999999999988753
No 78
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.2e-40 Score=380.98 Aligned_cols=256 Identities=28% Similarity=0.447 Sum_probs=209.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|+++++..||||+++... ...+.+.+|+.++++++||||+++++++. ++..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 46788899999999999999999888999999987543 34678999999999999999999999986 66789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|.++++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 265 ~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 265 AKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp TTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 99999999986431 24788899999999999999999 88999999999999999999999999999987643222
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||++....++.++|||||||++|||++ |+.||..... ..+...+..+... .
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~~-----~- 405 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--------PEVIRALERGYRM-----P- 405 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHHHHHTCCC-----C-
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCC-----C-
Confidence 22233456789999999988899999999999999999999 9999864321 1122222222111 1
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..+...+.+++.+||+.||++|||+++|++.|+++.
T Consensus 406 ---~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 406 ---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred ---CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 11223456889999999999999999999999999874
No 79
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.3e-40 Score=355.24 Aligned_cols=256 Identities=23% Similarity=0.367 Sum_probs=196.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|++.. +..||+|++.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4678889999999999999998743 4579999987543 334567889999999999999999999884 567899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++++|.+++.... ..+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+|||+++..
T Consensus 93 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECcccccccc
Confidence 999999999999998654 35889999999999999999999 889999999999999999999999999999876
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
............+++.|+|||++.+..++.++||||+|+++|||++ |..||...... ... ..+......
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~----~~~----~~i~~~~~~-- 236 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVI----GRIENGERL-- 236 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHH----HHHHTTCCC--
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH----HHH----HHHHcCCCC--
Confidence 5433333334456789999999988889999999999999999997 89998653221 121 222221111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.. .......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 237 ---~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 237 ---PM----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp ---CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11 1123346788999999999999999999999999874
No 80
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.5e-40 Score=363.44 Aligned_cols=248 Identities=26% Similarity=0.366 Sum_probs=199.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.++||+|+||.||+|+.+ +|+.||||++... .....+.+.+|..+++.+ +||||+++++++..++..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999875 6899999998754 233455677899999988 69999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++++||+|||+++..
T Consensus 102 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 999999999999998754 5899999999999999999999 889999999999999999999999999999754
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.. ........+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .+...+......
T Consensus 175 ~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~--- 242 (353)
T 3txo_A 175 IC-NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILNDEVV--- 242 (353)
T ss_dssp CC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCC---
T ss_pred cc-CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCC---
Confidence 32 122334567999999999998888999999999999999999999999653221 122222222111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM------LHVLK 951 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~ell~ 951 (959)
.| ......+.+++.+|++.||++||++ +|+++
T Consensus 243 ~p-------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 243 YP-------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CC-------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CC-------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11 1123457789999999999999998 77765
No 81
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.2e-40 Score=352.64 Aligned_cols=256 Identities=28% Similarity=0.452 Sum_probs=211.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 57888999999999999999998888999999875433 34678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH 838 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 838 (959)
+++|.+++.... ..+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+.........
T Consensus 87 ~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 87 HGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp TCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCcHHHHHhhCc---ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 999999998754 35789999999999999999999 889999999999999999999999999999876433222
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
......+++.|+|||+..+..++.++||||+|+++|||++ |+.||..... ......+...... ..+
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~i~~~~~~--~~~--- 227 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTGFRL--YKP--- 227 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCCC--CCC---
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--------HHHHHHHhcCCcC--CCC---
Confidence 2334457789999999988889999999999999999999 8999864321 1122222222110 111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
......+.+++.+||+.||++||++++++++|+++..
T Consensus 228 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 228 ----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1123467889999999999999999999999999864
No 82
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5.2e-40 Score=369.68 Aligned_cols=257 Identities=23% Similarity=0.268 Sum_probs=205.8
Q ss_pred HHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 674 ILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 674 ~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
+....++|++.++||+|+||.||+|+.+ +++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+++.
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 143 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 143 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence 3345678999999999999999999876 58899999986532 2223457789999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||++||+|.++++.. .+++..+..++.||+.||+||| +.||+||||||+||+++.++++||+|||++
T Consensus 144 ~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp EEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEecccee
Confidence 99999999999999999764 3788999999999999999999 889999999999999999999999999999
Q ss_pred cccccccccccccccccccccCCCcCCCCC----CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQSGR----STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
+.............+||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... .. ...+..
T Consensus 216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-------~~-~~~i~~ 287 (410)
T 3v8s_A 216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-------GT-YSKIMN 287 (410)
T ss_dssp EECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HH-HHHHHT
T ss_pred EeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-------hH-HHHHHh
Confidence 876544333344668999999999887665 789999999999999999999999653211 11 111111
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAM--RPTMLHVLKF 952 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~ell~~ 952 (959)
.... ...|. .......+.+++.+|+..+|.+ ||+++||+++
T Consensus 288 ~~~~-~~~p~-----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 288 HKNS-LTFPD-----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHHH-CCCCT-----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cccc-ccCCC-----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 1000 00010 0112346778999999999998 9999999875
No 83
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5e-40 Score=365.04 Aligned_cols=262 Identities=29% Similarity=0.466 Sum_probs=211.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
..++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.++++++||||+++++++..++.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578999999999999999999874 34789999997543 3345678999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCC--------------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCC
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGS--------------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIK 809 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~--------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 809 (959)
.++||||+++|+|.++++..... ...+++.+++.++.||++||+||| +.||+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 99999999999999999874321 146899999999999999999999 8899999999
Q ss_pred CCCEEECCCCcEEEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCC
Q 002155 810 ASNILLNEEFEAKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEF 887 (959)
Q Consensus 810 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~ 887 (959)
|+||+++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999976543222 12234467889999999888889999999999999999999 999986432
Q ss_pred ccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 888 KDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. ..+...+..+.... .+..+...+.+++.+||+.||++||++.++++.|+++..
T Consensus 282 ~--------~~~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 282 H--------EEVIYYVRDGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp H--------HHHHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred h--------HHHHHHHhCCCcCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 1 11222233222111 111233468889999999999999999999999998853
No 84
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=356.01 Aligned_cols=252 Identities=20% Similarity=0.284 Sum_probs=205.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|++. +++.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467889999999999999999875 5889999998643 33455688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC--CCcEEEccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE--EFEAKVADFGLARLISA 834 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~~ 834 (959)
+++|+|.+++.... ..+++.+++.++.|++.|++||| +.||+||||||+||+++. ++.+||+|||+++....
T Consensus 83 ~~g~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 83 ISGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 99999999997643 35889999999999999999999 889999999999999987 78999999999987643
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.. ......||+.|+|||++.+..++.++||||+||++|||++|..||...... . ....+...... ..+
T Consensus 157 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~-~~~~i~~~~~~--~~~ 224 (321)
T 1tki_A 157 GD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-------Q-IIENIMNAEYT--FDE 224 (321)
T ss_dssp TC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHHTCCC--CCH
T ss_pred CC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-------H-HHHHHHcCCCC--CCh
Confidence 22 223456899999999999888999999999999999999999999653211 1 12222221110 000
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ......+.+++.+||..||++|||+.|++++
T Consensus 225 ~~~----~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 225 EAF----KEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHH----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhh----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000 1123467899999999999999999999874
No 85
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.6e-39 Score=351.09 Aligned_cols=262 Identities=26% Similarity=0.326 Sum_probs=199.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||+|+||.||+|+..+|+.||+|++.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5788899999999999999998889999999986433 22346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++ +|.+++.... ..+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||.++......
T Consensus 82 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 986 9999887643 35788999999999999999999 8899999999999999999999999999997654321
Q ss_pred ccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc----
Q 002155 837 THVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV---- 911 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 911 (959)
.......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+...........+
T Consensus 155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T 1ob3_A 155 -RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA----DQLMRIFRILGTPNSKNWPNVT 229 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTGG
T ss_pred -cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHHCCCChhhchhhh
Confidence 122334689999999988654 5899999999999999999999998653211 111111111111100000
Q ss_pred ----cCccc-------cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 ----LDPTV-------LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ----~~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.++.. ...........+.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 001112234567899999999999999999999864
No 86
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.7e-39 Score=357.21 Aligned_cols=256 Identities=21% Similarity=0.317 Sum_probs=204.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 753 (959)
++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|..+++++ +||||+++++++.+++..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57888999999999999999975 58899999987542 33345678899999988 899999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|+|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++++||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999998654 5889999999999999999999 8899999999999999999999999999997543
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc-cCCchHHHHHHHhhcCcccccc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI-EGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........+.+.+......
T Consensus 162 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--- 237 (345)
T 3a8x_A 162 RP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--- 237 (345)
T ss_dssp CT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC---
T ss_pred CC-CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC---
Confidence 22 222345679999999999999999999999999999999999999996432111 1111222233333322111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM------LHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~ell~~ 952 (959)
.| ......+.+++.+||+.||++||++ +|++++
T Consensus 238 ~p-------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 238 IP-------RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CC-------TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CC-------CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 01 1233467889999999999999996 666643
No 87
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=360.34 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=202.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.++||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57889999999999999999865 58899999986532 334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+.+|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 9999999999998643 5889999999999999999999 88999999999999999999999999999987643
Q ss_pred ccccccccccccccccCCCcCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQS---GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .. ......+.....
T Consensus 168 --~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~----~~-~~~~~~~~~~~~--- 237 (384)
T 4fr4_A 168 --ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST----SS-KEIVHTFETTVV--- 237 (384)
T ss_dssp --TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS----CH-HHHHHHHHHCCC---
T ss_pred --CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc----cH-HHHHHHHhhccc---
Confidence 223345689999999999864 45899999999999999999999999653221 11 112222221111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-MLHVLK 951 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~ell~ 951 (959)
..+..+...+.+++.+||+.||++||+ ++++++
T Consensus 238 -------~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 -------TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -------CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -------CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 011123356888999999999999998 677654
No 88
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=7.6e-40 Score=358.75 Aligned_cols=261 Identities=30% Similarity=0.444 Sum_probs=211.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+++++.++||||+++++++..++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788899999999999999985 245789999987543 34456788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcC--------------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCC
Q 002155 751 LLVYEYMVNGSLDLWLRNRTG--------------------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKA 810 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 810 (959)
++||||+++|+|.+++..... ....+++.+++.++.|+++||+||| +.||+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 999999999999999987542 1234889999999999999999999 88999999999
Q ss_pred CCEEECCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCc
Q 002155 811 SNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFK 888 (959)
Q Consensus 811 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~ 888 (959)
+||+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||+|+++|||++ |..||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999866433222 1233457889999999888889999999999999999999 9999865322
Q ss_pred cccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 889 DIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. . +...+...... . ........+.+++.+||+.||++||+++|++++|+++..
T Consensus 259 ~----~----~~~~~~~~~~~-----~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 E----R----LFNLLKTGHRM-----E----RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp G----G----HHHHHHTTCCC-----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H----H----HHHHhhcCCcC-----C----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1 1 22222222111 1 111233468889999999999999999999999999854
No 89
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=355.13 Aligned_cols=252 Identities=22% Similarity=0.316 Sum_probs=204.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch------hhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT------QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++..+...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456889999999999999999875 689999999865332 1356789999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC----cEEEccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF----EAKVADF 826 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Df 826 (959)
++||||+++|+|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS----CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 99999999999999997543 5889999999999999999999 88999999999999998887 8999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|..||...... . ....+...
T Consensus 163 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~-~~~~~~~~ 232 (326)
T 2y0a_A 163 GLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------E-TLANVSAV 232 (326)
T ss_dssp TTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------H-HHHHHHHT
T ss_pred CCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-------H-HHHHHHhc
Confidence 9998764322 223457999999999999899999999999999999999999998643211 1 11111111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ...+.... .....+.+++.+||+.||++|||++|++++
T Consensus 233 ~~--~~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 233 NY--EFEDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CC--CCCHHHHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CC--CcCccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 10 00000001 123457789999999999999999999874
No 90
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.5e-39 Score=362.00 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=205.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|.++ +|+.||+|++... .....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999875 6899999998653 2334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC---CcEEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE---FEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~ 831 (959)
||+++|+|.+++.... .+++.+++.++.||+.||+||| +.||+||||||+||+++.+ +.+||+|||++..
T Consensus 108 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp CCCCSCBHHHHHTTCS----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 9999999999987643 5889999999999999999999 8899999999999999865 4599999999987
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... .......||+.|+|||++.+..++.++||||+||++|||++|.+||..... ..+...+..+....
T Consensus 181 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--------~~~~~~i~~~~~~~- 249 (362)
T 2bdw_A 181 VNDS--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIKAGAYDY- 249 (362)
T ss_dssp CTTC--CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCC-
T ss_pred ecCC--cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCC-
Confidence 6532 223346799999999999998999999999999999999999999864321 11222222221110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ ..........+.+++.+||+.||++||++.|++++
T Consensus 250 --~---~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 --P---SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp --C---TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred --C---cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 01112233467889999999999999999999865
No 91
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.7e-40 Score=372.86 Aligned_cols=261 Identities=24% Similarity=0.268 Sum_probs=207.5
Q ss_pred HHHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCC
Q 002155 673 HILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE 748 (959)
Q Consensus 673 ~~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 748 (959)
++....++|++.++||+|+||+||+|+++ +++.||+|++.+.. ......+.+|..+++.++||||++++++|.+++
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 147 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN 147 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence 34445688999999999999999999976 47899999987532 122234788999999999999999999999999
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..|+||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+|||++.++.+||+|||+
T Consensus 148 ~~~lV~Ey~~gg~L~~~l~~~~---~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 148 NLYLVMDYYVGGDLLTLLSKFE---DRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp EEEEEECCCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEecCCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhh
Confidence 9999999999999999998643 35899999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
++.............+||+.|+|||++. ...++.++||||+||++|||++|+.||...... +....+....
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~----~~~~~i~~~~ 297 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKIMNHK 297 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHHTHH
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh----HHHHhhhhcc
Confidence 9876544444444568999999999876 567899999999999999999999999653211 1111111110
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAM--RPTMLHVLKF 952 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~ell~~ 952 (959)
.. ...|... ......+.+++.+|+..+|++ ||+++|++++
T Consensus 298 ~~-----~~~p~~~----~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 298 ER-----FQFPTQV----TDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HH-----CCCCSSC----CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cc-----ccCCccc----ccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00 0011111 112345778999999888888 9999999874
No 92
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-39 Score=351.77 Aligned_cols=246 Identities=23% Similarity=0.325 Sum_probs=204.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|..+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357889999999999999999875 68999999987542 23456678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|+|.++++... .+++..+..++.||+.||+||| +.||+||||||+||+++.++++||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ----RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHHHTS----SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 99999999999998654 5889999999999999999999 8999999999999999999999999999998654
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. ......||+.|+|||++.+..++.++||||+||++|||++|..||..... ... ...+..... ..
T Consensus 158 ~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~-~~~i~~~~~---~~ 222 (318)
T 1fot_A 158 D----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-------MKT-YEKILNAEL---RF 222 (318)
T ss_dssp S----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHH-HHHHHHCCC---CC
T ss_pred C----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHH-HHHHHhCCC---CC
Confidence 2 22345799999999999999999999999999999999999999964321 111 122222111 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
| ......+.+++.+|+..||++|| +++|++++
T Consensus 223 p-------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 223 P-------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp C-------TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred C-------CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 1 11234678899999999999999 88998754
No 93
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4.2e-40 Score=382.08 Aligned_cols=257 Identities=26% Similarity=0.415 Sum_probs=211.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC-CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|+++. +..||||++.... ...+++.+|+.++++++||||++++++|..++..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 3568888999999999999999764 8899999997543 3457799999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.++++.... ..+++..++.++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++......
T Consensus 298 ~~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 298 MTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp CTTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred cCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 999999999986432 35889999999999999999999 8899999999999999999999999999998765333
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
........++..|+|||++.+..++.++|||||||++|||++ |..||...... . +.+.+...... .
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----~----~~~~~~~~~~~-----~ 439 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----Q----VYELLEKDYRM-----E 439 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----G----HHHHHHTTCCC-----C
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----H----HHHHHHcCCCC-----C
Confidence 222333456789999999988889999999999999999999 88998643211 1 22222222111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..+...+.+++.+||+.||++|||++++++.|+++.
T Consensus 440 ----~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 440 ----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ----CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 11223356788999999999999999999999999874
No 94
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.9e-40 Score=367.29 Aligned_cols=260 Identities=30% Similarity=0.449 Sum_probs=211.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC--------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD 747 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 747 (959)
.++|.+.+.||+|+||.||+|++. ++..||||++.... ......+.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467889999999999999999852 24579999987543 34456788999999999 899999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCC------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGS------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
+..++||||+++|+|.+++...... ...+++.+++.++.|++.||+||| +.||+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 9999999999999999999875421 235899999999999999999999 8899999999999999
Q ss_pred CCCCcEEEcccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCC
Q 002155 816 NEEFEAKVADFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGG 893 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 893 (959)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~----- 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----- 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 9999999999999986643222 22233467889999999999999999999999999999999 9999864321
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+...+........ ...+...+.+++.+||+.||++|||++|++++|+++.
T Consensus 300 ---~~~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 300 ---EELFKLLKEGHRMDK---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp ---HHHHHHHHTTCCCCC---------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHHHHcCCCCCC---------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 122333333221111 1122346888999999999999999999999999874
No 95
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.6e-39 Score=373.14 Aligned_cols=252 Identities=29% Similarity=0.454 Sum_probs=206.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCC-ceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE-EKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 357888999999999999999985 7899999997543 4567899999999999999999999986655 78999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++|+|.++++.... ..+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 342 (450)
T ss_dssp CTTCBHHHHHHHHCT--TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence 999999999987642 24688999999999999999999 889999999999999999999999999999754321
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.....+++.|+|||.+.+..++.++|||||||++|||++ |+.||..... .+. ...+..+.. +.
T Consensus 343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~----~~~----~~~i~~~~~-----~~ 406 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDV----VPRVEKGYK-----MD 406 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT----TTH----HHHHHTTCC-----CC
T ss_pred ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHH----HHHHHcCCC-----CC
Confidence 122356889999999999999999999999999999998 9999864322 122 222222211 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.+..+...+.+++.+||+.||++|||+.++++.|++++.
T Consensus 407 ----~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 407 ----APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 112234568889999999999999999999999998853
No 96
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.1e-39 Score=359.66 Aligned_cols=249 Identities=23% Similarity=0.345 Sum_probs=203.5
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 751 (959)
..++|++.++||+|+||.||+|+.+ +|+.||+|+++... ....+.+..|..+++.+ +||||+++++++.+++..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4578999999999999999999975 68899999987542 23445677899998877 8999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+++|+|.+++.... .+++.++..++.|++.||+||| +.||+||||||+||+++.++++||+|||+++.
T Consensus 95 lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 9999999999999998754 5889999999999999999999 88999999999999999999999999999975
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... .......+||+.|+|||++.+..++.++||||+||++|||++|..||..... ..+...+.....
T Consensus 168 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~--- 235 (345)
T 1xjd_A 168 NMLG-DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--------EELFHSIRMDNP--- 235 (345)
T ss_dssp CCCT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC---
T ss_pred cccC-CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHhCCC---
Confidence 4322 2223456899999999999999999999999999999999999999964321 112222222211
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTML-HVLK 951 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-ell~ 951 (959)
.. +......+.+++.+||+.||++||++. ++++
T Consensus 236 ---~~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 236 ---FY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp ---CC----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ---CC----CcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 01 111234678899999999999999997 6653
No 97
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-39 Score=359.99 Aligned_cols=253 Identities=21% Similarity=0.286 Sum_probs=206.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+|+.+++.++||||+++++++.++...++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999999999875 6889999999766555566788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC--CCcEEEccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE--EFEAKVADFGLARLISA 834 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~~ 834 (959)
+++|+|.+++.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+++....
T Consensus 130 ~~gg~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 130 LSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 99999999997543 35889999999999999999999 889999999999999974 47899999999987653
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.. ......||+.|+|||++.+..++.++||||+||++|||++|..||..... ... ...+...... ..+
T Consensus 204 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-------~~~-~~~i~~~~~~--~~~ 271 (387)
T 1kob_A 204 DE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-------LET-LQNVKRCDWE--FDE 271 (387)
T ss_dssp TS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHH-HHHHHHCCCC--CCS
T ss_pred Cc--ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-------HHH-HHHHHhCCCC--CCc
Confidence 22 22334789999999999999999999999999999999999999965321 111 1222221110 111
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ........+.+++.+||+.||++|||+.|++++
T Consensus 272 ~----~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 272 D----AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp S----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred c----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1 111233467899999999999999999999874
No 98
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.3e-39 Score=364.03 Aligned_cols=263 Identities=29% Similarity=0.436 Sum_probs=209.5
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD 747 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 747 (959)
...++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 98 (359)
T 3vhe_A 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 98 (359)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence 3567899999999999999999973 246789999997543 33456789999999999 789999999998775
Q ss_pred C-ceEEEEEeccCCCHHHHHhhhcCC------------------------------------------------------
Q 002155 748 E-EKLLVYEYMVNGSLDLWLRNRTGS------------------------------------------------------ 772 (959)
Q Consensus 748 ~-~~~lv~e~~~~g~L~~~l~~~~~~------------------------------------------------------ 772 (959)
+ ..++||||+++|+|.++++.....
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 5 489999999999999999875421
Q ss_pred --------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc-cccccc
Q 002155 773 --------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET-HVSTDI 843 (959)
Q Consensus 773 --------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~ 843 (959)
...+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....... ......
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 255 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcccc
Confidence 112889999999999999999999 88999999999999999999999999999986543222 223345
Q ss_pred cccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCH
Q 002155 844 AGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSK 922 (959)
Q Consensus 844 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (959)
.||+.|+|||++.+..++.++|||||||++|||++ |..||...... ..+...+........ +.
T Consensus 256 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~~~~~~~~~~~---------~~ 319 (359)
T 3vhe_A 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------EEFCRRLKEGTRMRA---------PD 319 (359)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-------HHHHHHHHHTCCCCC---------CT
T ss_pred CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh-------HHHHHHHHcCCCCCC---------CC
Confidence 68899999999988899999999999999999998 99998653222 112222222211111 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 923 PMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 923 ~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.....+.+++.+||+.||++|||++|++++|+++.
T Consensus 320 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 320 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 12346788999999999999999999999999874
No 99
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.1e-39 Score=349.74 Aligned_cols=263 Identities=25% Similarity=0.323 Sum_probs=201.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||+||+|++. +++.||||++.... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57889999999999999999875 68999999986433 3334678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++ ++.+++.... ..+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.....
T Consensus 82 ~~~~-~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9976 6666655433 35899999999999999999999 889999999999999999999999999999876432
Q ss_pred cccccccccccccccCCCcCCCCC-CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC-
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGR-STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD- 913 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 913 (959)
........||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... ......+.+.........+..
T Consensus 155 -~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~ 230 (292)
T 3o0g_A 155 -VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV---DDQLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp -CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH---HHHHHHHHHHHCCCCTTTCTTG
T ss_pred -cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH---HHHHHHHHHHhCCCChhhhhhh
Confidence 22233457899999999887765 799999999999999999998886443221 111111222111111100000
Q ss_pred --------------ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 --------------PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 --------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..............+.+++.+|++.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000011112344567899999999999999999999874
No 100
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=6.3e-40 Score=359.69 Aligned_cols=253 Identities=24% Similarity=0.328 Sum_probs=201.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch-hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT-QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 357899999999999999999876 789999999864332 233568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++|+|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 999999999987543 5889999999999999999999 889999999999999999999999999999865432
Q ss_pred c-ccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 836 E-THVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 836 ~-~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. ........||+.|+|||++.+..+ +.++||||+||++|||++|+.||....... .. .. ....... ...
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~----~~-~~~~~~~--~~~ 229 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QE----YS-DWKEKKT--YLN 229 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS--HH----HH-HHHTTCT--TST
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH--HH----HH-HHhcccc--cCC
Confidence 2 222335679999999999887775 778999999999999999999996532211 01 11 1111100 000
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+.+++.+||+.||++|||++|++++
T Consensus 230 ------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 ------PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ------ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 112233467789999999999999999999864
No 101
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=371.18 Aligned_cols=261 Identities=22% Similarity=0.226 Sum_probs=206.3
Q ss_pred HHHHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecC
Q 002155 672 VHILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD 747 (959)
Q Consensus 672 ~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 747 (959)
.+.....++|++.++||+|+||+||+|+.+ +|+.||||++.+.. ....+.+.+|..++..++||||+++++++.++
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 344445688999999999999999999975 68999999987532 22334578899999999999999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
+..|+||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.||+||||||+|||++.++++||+|||
T Consensus 134 ~~~~lVmE~~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 134 NYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeech
Confidence 99999999999999999998753 35889999999999999999999 8899999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcCC-------CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQ-------SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
+++.............+||+.|+|||++. ...++.++||||+||++|||++|+.||...... . ..
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-------~-~~ 279 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-------E-TY 279 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HH
T ss_pred hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-------H-HH
Confidence 99876543333334568999999999876 457899999999999999999999999653211 1 11
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMR---PTMLHVLKF 952 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~ell~~ 952 (959)
..+..... ....|. ........+.+++.+||. +|++| |+++|++++
T Consensus 280 ~~i~~~~~-~~~~p~----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 280 GKIVHYKE-HLSLPL----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHHTHHH-HCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHHHhccc-CcCCCc----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11111000 000011 011233467889999999 99998 589998764
No 102
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.2e-38 Score=344.41 Aligned_cols=253 Identities=29% Similarity=0.497 Sum_probs=201.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhh-------HHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQG-------HREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++. +++.||+|++....... .+.+.+|+.++++++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 467888999999999999999874 78999999986432211 157889999999999999999999986544
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEECCCCc-----EE
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLNEEFE-----AK 822 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~-----~k 822 (959)
++||||+++|+|.+++.... ..+++..++.++.|++.|++||| +.| |+||||||+||+++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHhccc---CCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEE
Confidence 79999999999999887644 36899999999999999999999 788 999999999999988776 99
Q ss_pred EcccccccccccccccccccccccccccCCCcC--CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 823 VADFGLARLISACETHVSTDIAGTFGYIPPEYG--QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 823 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
|+|||+++.... ......||+.|+|||++ ....++.++||||+||++|||++|+.||...... ......
T Consensus 170 l~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~ 240 (287)
T 4f0f_A 170 VADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-----KIKFIN 240 (287)
T ss_dssp ECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC-----HHHHHH
T ss_pred eCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc-----HHHHHH
Confidence 999999975432 23345789999999998 3455789999999999999999999999653221 111111
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
....... .+.. ...+...+.+++.+||+.||++|||++|+++.|+++
T Consensus 241 ~~~~~~~-----~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 241 MIREEGL-----RPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHSCC-----CCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHhccCC-----CCCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1111111 1111 122335688999999999999999999999999875
No 103
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=9.6e-40 Score=349.74 Aligned_cols=250 Identities=31% Similarity=0.467 Sum_probs=193.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccch----hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT----QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|++. ++.||||++..... ...+.+.+|+++++.++||||+++++++..++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888999999999999999984 88999999865432 23467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC---eEeCCCCCCCEEECC--------CCcEEE
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH---IIHRDIKASNILLNE--------EFEAKV 823 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~---ivH~dlk~~Nill~~--------~~~~kl 823 (959)
||+++++|.+++... .+++..++.++.|++.|++||| +.| |+||||||+||+++. ++.+||
T Consensus 86 e~~~~~~L~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl 157 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI 157 (271)
T ss_dssp ECCTTEEHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred EcCCCCCHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEE
Confidence 999999999998643 4889999999999999999999 667 999999999999986 678999
Q ss_pred cccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh
Q 002155 824 ADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
+|||.++...... .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... . .....
T Consensus 158 ~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~-~~~~~ 226 (271)
T 3dtc_A 158 TDFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-------A-VAYGV 226 (271)
T ss_dssp CCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-------H-HHHHH
T ss_pred ccCCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHhh
Confidence 9999997654322 22457899999999998888999999999999999999999998643211 1 11111
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEI 956 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 956 (959)
...... ... .......+.+++.+||+.||++|||++|++++|+++
T Consensus 227 ~~~~~~----~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 227 AMNKLA----LPI----PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HTSCCC----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hcCCCC----CCC----CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111111 111 112234688899999999999999999999999875
No 104
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.9e-39 Score=356.33 Aligned_cols=260 Identities=18% Similarity=0.213 Sum_probs=207.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+++++.+ +||||+++++++..++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46788999999999999999986 4789999999865432 23578899999999 99999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc-----EEEccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE-----AKVADFGLAR 830 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~~~ 830 (959)
|+ +++|.+++.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++. +||+|||+++
T Consensus 86 ~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 86 LL-GPSLEDLFDLCD---RTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred eC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99 999999998653 35899999999999999999999 889999999999999998887 9999999998
Q ss_pred cccccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 831 LISACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 831 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....+ ...... ..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~----~~~~~~-~~i~ 233 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD----TLKERY-QKIG 233 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS----SHHHHH-HHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc----cHHHHH-HHHH
Confidence 76433221 123457999999999999999999999999999999999999999754221 121111 1111
Q ss_pred cCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..... ..+...... .. .+.+++.+||+.||.+||+++++.+.|+++.
T Consensus 234 ~~~~~--~~~~~~~~~---~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 234 DTKRA--TPIEVLCEN---FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp HHHHH--SCHHHHTTT---CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred hhhcc--CCHHHHhcc---Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 10000 000000011 12 7889999999999999999999999998774
No 105
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.5e-39 Score=357.77 Aligned_cols=260 Identities=25% Similarity=0.382 Sum_probs=194.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCC----CEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCce-
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDG----KTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK- 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~----~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~- 750 (959)
.++|++.+.||+|+||.||+|++... ..||||++... .....+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 46799999999999999999987643 27999998754 344567789999999999999999999999776655
Q ss_pred -----EEEEEeccCCCHHHHHhhhcC--CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 751 -----LLVYEYMVNGSLDLWLRNRTG--SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 751 -----~lv~e~~~~g~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
++||||+++|+|.+++..... ....+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEE
Confidence 999999999999999976542 2225889999999999999999999 889999999999999999999999
Q ss_pred ccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHH
Q 002155 824 ADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+|||+++........ ......+++.|+|||.+.+..++.++||||+||++|||++ |..||...... .. ..
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~----~~ 250 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA----EI----YN 250 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GH----HH
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH----HH----HH
Confidence 999999866432221 1223356789999999988899999999999999999999 89998653221 11 12
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+...... . ........+.+++.+||+.||++|||+.++++.|+++.
T Consensus 251 ~~~~~~~~-----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 251 YLIGGNRL-----K----QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp HHHTTCCC-----C----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhcCCCC-----C----CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 22221110 0 11123346889999999999999999999999999874
No 106
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6.1e-39 Score=348.69 Aligned_cols=261 Identities=15% Similarity=0.174 Sum_probs=208.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++.... ..+.+.+|+..++.+ +|++++++++++..+...++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 45788999999999999999986 478999999886433 234577899999999 79999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc-----EEEccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE-----AKVADFGLAR 830 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~~~ 830 (959)
|+ +++|.+++.... ..+++.+++.++.|++.|++||| +.||+||||||+||+++.++. +||+|||.++
T Consensus 87 ~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 87 LL-GPSLEDLLDLCG---RKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred ec-CCCHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99 999999998654 35899999999999999999999 899999999999999987766 9999999998
Q ss_pred cccccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 831 LISACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 831 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
........ ......||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ......+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~ 238 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-KQKYERIGEKKQ 238 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-HHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-HHHHHHHHhhcc
Confidence 76543221 22345799999999999999999999999999999999999999975322211 111111111111
Q ss_pred cCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 905 KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..... .. ...+...+.+++.+||+.||++||+++++++.|+++.
T Consensus 239 ~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 239 STPLR-----EL----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp HSCHH-----HH----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred CccHH-----HH----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 11100 00 0122346889999999999999999999999999874
No 107
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5.6e-39 Score=351.69 Aligned_cols=266 Identities=26% Similarity=0.368 Sum_probs=190.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467999999999999999999875 68999999986543 2334678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcC--CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 756 YMVNGSLDLWLRNRTG--SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|++ |+|.+++..... ....+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 599999876532 2235889999999999999999999 8899999999999999999999999999998764
Q ss_pred cccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc--
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD-- 910 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 910 (959)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+...........
T Consensus 160 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~ 234 (317)
T 2pmi_A 160 IPV-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE----EQLKLIFDIMGTPNESLWP 234 (317)
T ss_dssp SCC-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCCTTTCG
T ss_pred CCc-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHhCCCChhHhh
Confidence 322 22234578999999998876 46899999999999999999999999653221 11111211111100000
Q ss_pred ------ccCcccc---CC---------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 ------VLDPTVL---TA---------DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ------~~~~~~~---~~---------~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+... .. ........+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000000 00 011233468899999999999999999999864
No 108
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=9.9e-40 Score=359.32 Aligned_cols=256 Identities=25% Similarity=0.426 Sum_probs=200.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCC----EEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGK----TVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
.++|++.++||+|+||.||+|++. +++ +||+|.+.... ....+.+.+|+.++++++||||+++++++..+ ..+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeE
Confidence 357888999999999999999864 344 46888875432 34456789999999999999999999999865 478
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+.+|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCTTCBHHHHHHHST---TSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 9999999999999998754 35889999999999999999999 78999999999999999999999999999987
Q ss_pred cccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 832 ISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 832 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
........ .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... . +...+......
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~----~~~~~~~~~~~ 238 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----E----ISSILEKGERL 238 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----G----HHHHHHTTCCC
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH----H----HHHHHHcCCCC
Confidence 65332222 223456889999999999999999999999999999999 99998653221 1 12222222111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.....+...+.+++.+||+.||++||+++|++++|+++.
T Consensus 239 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 239 ---------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp ---------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred ---------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 011123346888999999999999999999999998874
No 109
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=7.3e-40 Score=376.17 Aligned_cols=256 Identities=30% Similarity=0.466 Sum_probs=203.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|++.++..||||+++... ...+++.+|++++++++||||+++++++.. +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 45688899999999999999999888889999997543 235678999999999999999999999876 6789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|.++++...+ ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.......
T Consensus 261 ~~gsL~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 261 SKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp TTCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred cCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 99999999975431 24788999999999999999999 88999999999999999999999999999987653322
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||.+.+..++.++|||||||++|||++ |+.||..... ..+...+..+... .
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~~-----~- 401 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVERGYRM-----P- 401 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCCC-----C-
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCC-----C-
Confidence 22233456789999999988899999999999999999999 8999864321 1122333322111 1
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..+...+.+++.+||+.||++|||++++++.|+++.
T Consensus 402 ---~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 402 ---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred ---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 11223456888999999999999999999999999874
No 110
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=348.99 Aligned_cols=250 Identities=26% Similarity=0.350 Sum_probs=195.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--------------------------hhHHHHHHHHHHHh
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--------------------------QGHREFTAEMETLG 730 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 730 (959)
.++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 357888999999999999999865 688999999864321 11345789999999
Q ss_pred cCCCCceeccccceec--CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCC
Q 002155 731 KVKHQNLVPLLGYCSF--DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDI 808 (959)
Q Consensus 731 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 808 (959)
+++||||+++++++.. ++..++||||+++++|.++... ..+++.+++.++.|++.||+||| +.||+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCC
Confidence 9999999999999876 5678999999999999876543 35899999999999999999999 889999999
Q ss_pred CCCCEEECCCCcEEEcccccccccccccccccccccccccccCCCcCCCCC---CCCcCcchhHHHHHHHHHhCCCCCCC
Q 002155 809 KASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR---STTRGDVYSFGVILLELVTGKEPTGP 885 (959)
Q Consensus 809 k~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~p~~~ 885 (959)
||+||+++.++.+||+|||+++...... .......||+.|+|||.+.+.. ++.++||||+||++|||++|+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 9999999999999999999998765322 2233457999999999987665 37789999999999999999999864
Q ss_pred CCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 886 EFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ... ....+....... + . .......+.+++.+||+.||++||+++|++++
T Consensus 243 ~~-------~~~-~~~~~~~~~~~~---~-~----~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 243 ER-------IMC-LHSKIKSQALEF---P-D----QPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SS-------HHH-HHHHHHHCCCCC---C-S----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred cc-------HHH-HHHHHhcccCCC---C-C----ccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 21 111 122222211110 0 0 11123467889999999999999999999764
No 111
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.2e-39 Score=356.05 Aligned_cols=250 Identities=26% Similarity=0.313 Sum_probs=203.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 751 (959)
..++|++.++||+|+||.||+|+.+ +++.||+|++.... ....+.+..|..+++.+ +||+|+++++++...+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3468999999999999999999976 47899999987542 23456678899999988 7999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||++||+|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++++||+|||+++.
T Consensus 98 lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 9999999999999998754 5889999999999999999999 88999999999999999999999999999975
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .+.+.+......
T Consensus 171 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~-- 239 (353)
T 2i0e_A 171 NIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEHNVA-- 239 (353)
T ss_dssp CCCT-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCC--
T ss_pred cccC-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhCCCC--
Confidence 4321 22234567999999999999999999999999999999999999999653211 122222222111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
.| ......+.+++.+||+.||++||+ +++++++
T Consensus 240 -~p-------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 -YP-------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp -CC-------TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred -CC-------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 01 123346788999999999999995 5777654
No 112
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.7e-39 Score=355.06 Aligned_cols=251 Identities=23% Similarity=0.310 Sum_probs=181.6
Q ss_pred CCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEEEeccCCC
Q 002155 684 TNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVYEYMVNGS 761 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~ 761 (959)
.+.||+|+||.||+|+++ +++.||||++... ....+.+|+.+++.+. ||||+++++++.++...++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999875 6899999998643 3356778999999997 9999999999999999999999999999
Q ss_pred HHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC---cEEEccccccccccccccc
Q 002155 762 LDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF---EAKVADFGLARLISACETH 838 (959)
Q Consensus 762 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~~~~~~~~~ 838 (959)
|.+++.... .+++.++..++.|++.|++||| +.||+||||||+||+++.++ .+||+|||+++...... .
T Consensus 93 L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~ 164 (325)
T 3kn6_A 93 LFERIKKKK----HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-Q 164 (325)
T ss_dssp HHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-C
Confidence 999998753 5899999999999999999999 88999999999999997765 89999999998654322 2
Q ss_pred ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC
Q 002155 839 VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 839 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
......||+.|+|||++.+..++.++||||+||++|||++|..||............. .+...+..+.... . .
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~-~~~~~i~~~~~~~--~----~ 237 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV-EIMKKIKKGDFSF--E----G 237 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHH-HHHHHHTTTCCCC--C----S
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHH-HHHHHHHcCCCCC--C----c
Confidence 2234568999999999999999999999999999999999999997644332222222 2233333221110 0 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.........+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 0012234568899999999999999999998754
No 113
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6.7e-39 Score=354.58 Aligned_cols=245 Identities=22% Similarity=0.282 Sum_probs=204.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57889999999999999999875 68999999986532 234567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999999998754 4889999999999999999999 89999999999999999999999999999986543
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. .....||+.|+|||++.+..++.++||||+||++|||++|..||..... ..+...+..+... .|
T Consensus 194 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~---~p 258 (350)
T 1rdq_E 194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--------IQIYEKIVSGKVR---FP 258 (350)
T ss_dssp C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCC---CC
T ss_pred C----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--------HHHHHHHHcCCCC---CC
Confidence 2 2345799999999999999999999999999999999999999964321 1122222222110 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-----MLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ell~~ 952 (959)
......+.+++.+||+.||++||+ ++|++++
T Consensus 259 -------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 259 -------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp -------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred -------CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 122346788999999999999998 8888764
No 114
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.2e-39 Score=358.60 Aligned_cols=253 Identities=21% Similarity=0.269 Sum_probs=193.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467999999999999999999976 789999999875432 235678999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc--EEEccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE--AKVADFGLARLISA 834 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~~~~ 834 (959)
+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++. +||+|||+++....
T Consensus 98 ~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 98 ASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 99999999997654 5889999999999999999999 899999999999999987765 99999999974332
Q ss_pred ccccccccccccccccCCCcCCCCCCCCc-CcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTR-GDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
........||+.|+|||++.+..++.+ +||||+||++|||++|+.||...... ......+ ..+.......
T Consensus 171 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~-~~~~~~~~~~--- 241 (361)
T 3uc3_A 171 --HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP---RDYRKTI-QRILSVKYSI--- 241 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C---CCHHHHH-HHHHTTCCCC---
T ss_pred --cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH---HHHHHHH-HHHhcCCCCC---
Confidence 122234579999999999888777655 89999999999999999999653222 1122222 2221111100
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ ........+.+++.+||+.||++|||++|++++
T Consensus 242 ~-----~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 242 P-----DDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp C-----TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred C-----CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0 011123467889999999999999999999875
No 115
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-38 Score=349.28 Aligned_cols=263 Identities=27% Similarity=0.380 Sum_probs=201.3
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcC--CCCceeccccceecC----Cce
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV--KHQNLVPLLGYCSFD----EEK 750 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~----~~~ 750 (959)
..++|++.+.||+|+||.||+|++. ++.||||++..... ..+..|.+++... +||||+++++++... ...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 4578999999999999999999985 89999999864322 3344555555554 899999999998776 678
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC--------CeEeCCCCCCCEEECCCCcEE
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP--------HIIHRDIKASNILLNEEFEAK 822 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~--------~ivH~dlk~~Nill~~~~~~k 822 (959)
++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. ||+||||||+||+++.++.+|
T Consensus 111 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp EEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred EEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 9999999999999999764 3889999999999999999999 67 999999999999999999999
Q ss_pred Ecccccccccccccccc---cccccccccccCCCcCCCCCCCCc------CcchhHHHHHHHHHhC----------CCCC
Q 002155 823 VADFGLARLISACETHV---STDIAGTFGYIPPEYGQSGRSTTR------GDVYSFGVILLELVTG----------KEPT 883 (959)
Q Consensus 823 l~Dfg~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~DvwslG~il~elltg----------~~p~ 883 (959)
|+|||+++......... .....||+.|+|||++.+..++.+ +|||||||++|||++| ..||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 99999997664322221 124578999999999887776665 9999999999999999 5555
Q ss_pred CCCCccccCCchHHHHHHHhhcCccccccCccccC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 884 GPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT-ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
....... ............... .+.... .....+...+.+++.+||+.||++|||+.|++++|+++..
T Consensus 263 ~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 263 HDLVPSD---PSYEDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp TTTSCSS---CCHHHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhcCCC---CchhhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 4322221 111112222221111 111111 1123677789999999999999999999999999999854
No 116
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3e-39 Score=349.15 Aligned_cols=261 Identities=30% Similarity=0.478 Sum_probs=197.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.++||+|+||.||+|++. ..||||++... .....+.+.+|+.++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467888999999999999999874 36999998643 334456788999999999999999999965 4567899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 100 WCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp CCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred ecCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccc
Confidence 999999999997543 35889999999999999999999 889999999999999999999999999999765431
Q ss_pred -cccccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 836 -ETHVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 836 -~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.........||+.|+|||.+. +..++.++||||+|+++|||++|+.||...... ..+...+........
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~ 246 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-------DQIIEMVGRGSLSPD 246 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-------HHHHHHHHHTSCCCC
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-------HHHHHHhcccccCcc
Confidence 122223456899999999876 567888999999999999999999998653221 122222322221111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcC
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 959 (959)
. ......+...+.+++.+||+.||++|||++++++.|+++..|
T Consensus 247 ~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 247 L-----SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp T-----TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTCC
T ss_pred h-----hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhhC
Confidence 1 111222345788999999999999999999999999998764
No 117
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.1e-39 Score=348.38 Aligned_cols=251 Identities=23% Similarity=0.395 Sum_probs=203.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC-C-------CEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD-G-------KTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++.. + ..||+|++........+.+.+|+.++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3578889999999999999998653 3 4799999987666677889999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc--------E
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE--------A 821 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--------~ 821 (959)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++. +
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNK---NCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CEEEEECCCCCCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCccccccccee
Confidence 999999999999999998754 34889999999999999999999 889999999999999988877 9
Q ss_pred EEcccccccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 822 KVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
||+|||.+...... ....+++.|+|||.+.+ ..++.++||||+|+++|||++|..|+...... .. ..
T Consensus 161 kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~------~~-~~ 228 (289)
T 4fvq_A 161 KLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS------QR-KL 228 (289)
T ss_dssp EECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HH-HH
T ss_pred eeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch------HH-HH
Confidence 99999999654321 22457889999998877 67899999999999999999966554332211 11 11
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
....... . .+... ...+.+++.+||+.||++|||++|++++|+++.
T Consensus 229 ~~~~~~~---~-~~~~~-------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 229 QFYEDRH---Q-LPAPK-------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp HHHHTTC---C-CCCCS-------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred HHhhccC---C-CCCCC-------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 1111110 0 01111 124778999999999999999999999999873
No 118
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.1e-39 Score=352.81 Aligned_cols=259 Identities=26% Similarity=0.405 Sum_probs=213.0
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
..++|++.+.||+|+||.||+|.+. ++..||+|++.... ...+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 3567888999999999999999976 48889999987543 345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ...+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 90 ~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 90 FMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp CCTTEEHHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred cCCCCcHHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 999999999998643 245889999999999999999999 789999999999999999999999999999876544
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
.........+++.|+|||.+.+..++.++||||+|+++|+|++ |..||...... . +...+..... +
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~----~----~~~~~~~~~~-----~ 231 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----Q----VYELLEKDYR-----M 231 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----G----HHHHHHTTCC-----C
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----H----HHHHHhccCC-----C
Confidence 4333444567889999999988899999999999999999999 88998653221 1 1222222111 1
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. ........+.+++.+||+.||++|||++++++.|+++..
T Consensus 232 ~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 232 E----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C----CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 1 111223468899999999999999999999999998753
No 119
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=352.59 Aligned_cols=262 Identities=23% Similarity=0.331 Sum_probs=206.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceecccccee----cCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS----FDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|+.+++.++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46799999999999999999987 478999999987666666778899999999999999999999986 3347799
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.........+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999999999875444457899999999999999999999 789999999999999999999999999998764
Q ss_pred cccccc--------ccccccccccccCCCcCCCCC---CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 833 SACETH--------VSTDIAGTFGYIPPEYGQSGR---STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 833 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
...... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... ..... .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~----~ 258 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK--GDSVA----L 258 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT--TSCHH----H
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc--cchhh----H
Confidence 321110 011235799999999987654 688999999999999999999998532111 01111 1
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...... .. +........+.+++.+||+.||++||++++++++|+++.
T Consensus 259 ~~~~~~-----~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 259 AVQNQL-----SI----PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HHHCC-------C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred HhhccC-----CC----CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 111110 00 011122346889999999999999999999999999875
No 120
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.2e-39 Score=348.79 Aligned_cols=256 Identities=23% Similarity=0.359 Sum_probs=203.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|++.+ +..||+|.+... .....+.+.+|+.+++.++||||+++++++.. +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678889999999999999998542 346999998764 33445678899999999999999999998864 56799
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++++|.+++.... ..+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+...
T Consensus 90 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 999999999999998754 34788999999999999999999 889999999999999999999999999999876
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
............+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ... ..+.......
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~----~~~----~~~~~~~~~~- 234 (281)
T 3cc6_A 164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVI----GVLEKGDRLP- 234 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG----GHH----HHHHHTCCCC-
T ss_pred ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH----HHH----HHHhcCCCCC-
Confidence 5433333334467889999999988889999999999999999998 99998643221 121 2222211100
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .......+.+++.+||+.||++||++.|++++|+++.
T Consensus 235 -~-------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 235 -K-------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp -C-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -C-------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 0 1112346788999999999999999999999999874
No 121
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=356.69 Aligned_cols=252 Identities=23% Similarity=0.326 Sum_probs=190.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
..++|++.+.||+|+||.||+|++. +++.||||++.... ..+.+.+|++++++++||||+++++++..++..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4567999999999999999999976 57899999987543 34567889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~~~~~ 832 (959)
|+++|+|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+++..
T Consensus 129 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG----YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp CCCSCBHHHHHTTCS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred eCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 999999999997643 5889999999999999999999 789999999999999975 889999999999865
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... .......||+.|+|||++.+..++.++|||||||++|||++|..||...... ......+...... .
T Consensus 202 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~i~~~~~~-~- 270 (349)
T 2w4o_A 202 EHQ--VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-------QFMFRRILNCEYY-F- 270 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-------HHHHHHHHTTCCC-C-
T ss_pred Ccc--cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-------HHHHHHHHhCCCc-c-
Confidence 432 2223457899999999999989999999999999999999999998643221 1122222222111 0
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...........+.+++.+||+.||++|||+.|++++
T Consensus 271 ----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 271 ----ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp ----CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111112234567899999999999999999999874
No 122
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.9e-39 Score=350.92 Aligned_cols=264 Identities=24% Similarity=0.403 Sum_probs=206.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-----CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecC--Cce
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-----PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEK 750 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 750 (959)
++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+++++.++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578889999999999999983 368899999987543 33456788999999999999999999999776 668
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++|+|.+++.... ..+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccc
Confidence 99999999999999997654 35889999999999999999999 8899999999999999999999999999998
Q ss_pred ccccccc--cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCcc-------ccCCchHHHHHH
Q 002155 831 LISACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKD-------IEGGNLVGWVFQ 901 (959)
Q Consensus 831 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~-------~~~~~~~~~~~~ 901 (959)
....... .......+|..|+|||.+.+..++.++||||+|+++|||++|..|+...... .........+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 7654322 2223456788999999998888999999999999999999999986432110 001111111222
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+...... ..+......+.+++.+||+.||++|||++++++.|+++.
T Consensus 255 ~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLKEGKRL---------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHTTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccCCC---------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 22221111 111223456889999999999999999999999999874
No 123
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.5e-38 Score=347.57 Aligned_cols=263 Identities=24% Similarity=0.386 Sum_probs=201.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|+.. +|+.||||++... .......+.+|+.++++++||||+++++++..++..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 457999999999999999999864 7899999998642 234456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.........+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999999764433456899999999999999999999 8899999999999999999999999999997654
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ... ....+.....
T Consensus 188 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~-~~~~~~~~~~----- 255 (310)
T 2wqm_A 188 SKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----LYS-LCKKIEQCDY----- 255 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-----HHH-HHHHHHTTCS-----
T ss_pred CCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-----HHH-HHHHhhcccC-----
Confidence 322 2223456899999999999889999999999999999999999998643211 111 1222222111
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+... .......+.+++.+||+.||++|||++++++.|++++.
T Consensus 256 ~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 256 PPLP---SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp CCCC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCc---ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1111 11233467889999999999999999999999999864
No 124
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.9e-38 Score=343.79 Aligned_cols=258 Identities=21% Similarity=0.304 Sum_probs=199.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch---hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT---QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999975 688999999875432 2346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... .+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999999999998754 5889999999999999999999 8899999999999999999999999999997765
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
...........|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ..+...+..... .
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~----~ 253 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL--------SVMGAHINQAIP----R 253 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH--------HHHHHHHHSCCC----C
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH--------HHHHHHhccCCC----C
Confidence 4333333445789999999999999999999999999999999999999865321 112222222111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhh
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-TMLHVLKFLKEIK 957 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~ell~~L~~l~ 957 (959)
+... .......+.+++.+||+.||++|| +++++++.|++..
T Consensus 254 ~~~~---~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 254 PSTV---RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp GGGT---STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred cccc---CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 1111 112233677899999999999999 9999999998764
No 125
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.1e-37 Score=358.27 Aligned_cols=360 Identities=27% Similarity=0.363 Sum_probs=247.9
Q ss_pred CCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCC
Q 002155 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIE 107 (959)
Q Consensus 28 ~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~ 107 (959)
++..+.++. ..+++++.|+++++.+. .+|. +..+++|++|+|++|.+++. |. +..+++|++|++++|++++..+
T Consensus 34 ~~~~~~i~~--~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~ 107 (466)
T 1o6v_A 34 TNVTDTVSQ--TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP 107 (466)
T ss_dssp SSTTSEECH--HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred cccccccCh--hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh
Confidence 344444442 35678889999999887 5664 88899999999999999854 44 8889999999999999887655
Q ss_pred cccccCCCCceeeecccccccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcC
Q 002155 108 GVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAA 186 (959)
Q Consensus 108 ~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 186 (959)
|.++++|++|++++|.+.+..+ +..+ +|++|++++|++.+. + .+..+++|++|++. |.+.+.. .+.++++
T Consensus 108 --~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~ 178 (466)
T 1o6v_A 108 --LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTT 178 (466)
T ss_dssp --GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTT
T ss_pred --hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCC
Confidence 8888888888888888775443 3333 466666666666542 1 35555555555554 2232111 2555555
Q ss_pred CceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEccc
Q 002155 187 LERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSH 266 (959)
Q Consensus 187 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 266 (959)
|++|++++|.+++. ..+..+++|++|++++|.+++..| ++.+++|++|++++|++++. +.+..+++|+.|++++
T Consensus 179 L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~ 252 (466)
T 1o6v_A 179 LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLAN 252 (466)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCC
Confidence 55555555555532 234555555555555555553333 44455555555555555432 2344455555555555
Q ss_pred ccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEE
Q 002155 267 NNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTL 346 (959)
Q Consensus 267 N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 346 (959)
| .+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|
T Consensus 253 n------------------------------------~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 292 (466)
T 1o6v_A 253 N------------------------------------QISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 292 (466)
T ss_dssp S------------------------------------CCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEE
T ss_pred C------------------------------------ccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeE
Confidence 5 4443333 6677778888888888876544 7888889999
Q ss_pred EccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCcccc
Q 002155 347 DLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELD 426 (959)
Q Consensus 347 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 426 (959)
++++|++++..+ +..+++|+.|++++|++++..| +..+++|++|++++|++++. ..+.++++|++|++++|+++
T Consensus 293 ~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~ 366 (466)
T 1o6v_A 293 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQIS 366 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred EcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccC
Confidence 999998886544 7788899999999999887655 77889999999999999865 57888999999999999998
Q ss_pred CCCchhhhcccccceEeeccccccCCcccc
Q 002155 427 GQLPSSLSNILNLVGLYLQHNKLSGPVDEL 456 (959)
Q Consensus 427 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 456 (959)
+..| +..+++|+.|++++|+++++|...
T Consensus 367 ~~~~--~~~l~~L~~L~l~~n~~~~~p~~~ 394 (466)
T 1o6v_A 367 DLTP--LANLTRITQLGLNDQAWTNAPVNY 394 (466)
T ss_dssp BCGG--GTTCTTCCEEECCCEEEECCCBCC
T ss_pred ccch--hhcCCCCCEEeccCCcccCCchhh
Confidence 7665 888999999999999999876554
No 126
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.6e-39 Score=345.26 Aligned_cols=253 Identities=25% Similarity=0.380 Sum_probs=204.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecC--CceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|++. ++.||||++.... ....+.+.+|+.++++++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57888999999999999999985 8899999987542 34456789999999999999999999999876 7789999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||+++|+|.+++.... ...+++.+++.++.|++.|++||| +.+ ++||||||+||+++.++.++++|||++...
T Consensus 89 e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp ECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred cccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 9999999999998643 235899999999999999999999 788 999999999999999999999999887543
Q ss_pred ccccccccccccccccccCCCcCCCCCCCC---cCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTT---RGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
. .....||+.|+|||.+.+..++. ++||||+|+++|||++|+.||..... ............
T Consensus 164 ~------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~-- 228 (271)
T 3kmu_A 164 Q------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN-------MEIGMKVALEGL-- 228 (271)
T ss_dssp S------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH-------HHHHHHHHHSCC--
T ss_pred c------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh-------HHHHHHHHhcCC--
Confidence 2 12346899999999988765554 79999999999999999999864321 111112221111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhcC
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKVE 959 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 959 (959)
.+.. +......+.+++.+||+.||++|||++|+++.|++++.+
T Consensus 229 ---~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~~ 271 (271)
T 3kmu_A 229 ---RPTI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271 (271)
T ss_dssp ---CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC-
T ss_pred ---CCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 1111 112334688899999999999999999999999998653
No 127
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-39 Score=359.74 Aligned_cols=262 Identities=27% Similarity=0.429 Sum_probs=208.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEcccc-chhhHHHHHHHHHHHhcC-CCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQA-KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+.+++++ +||||+++++++..++.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 46889999999999999999985 24568999998754 233456788999999999 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCC-------------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCC
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGS-------------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKA 810 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 810 (959)
.++||||+++|+|.+++...... ...+++..++.++.|++.||+||| +.||+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence 99999999999999999875421 134789999999999999999999 88999999999
Q ss_pred CCEEECCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCc
Q 002155 811 SNILLNEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFK 888 (959)
Q Consensus 811 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~ 888 (959)
+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||+| |..||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 9999999999999999999866433222 2233457889999999888889999999999999999998 9999865422
Q ss_pred cccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 889 DIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. ..+...+..... +.. +......+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 281 ~-------~~~~~~~~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 281 D-------ANFYKLIQNGFK-----MDQ----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp S-------HHHHHHHHTTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred H-------HHHHHHHhcCCC-----CCC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 1 112222222211 111 11223468889999999999999999999999998743
No 128
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=356.63 Aligned_cols=247 Identities=23% Similarity=0.280 Sum_probs=197.1
Q ss_pred CCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCCH
Q 002155 684 TNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
.++||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++..++..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 568999999999999864 6899999999876656667899999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE--CCCCcEEEccccccccccccccccc
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL--NEEFEAKVADFGLARLISACETHVS 840 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfg~~~~~~~~~~~~~ 840 (959)
.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||+++...... ..
T Consensus 174 ~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~ 245 (373)
T 2x4f_A 174 FDRIIDES---YNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KL 245 (373)
T ss_dssp HHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BC
T ss_pred HHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--cc
Confidence 99987643 35889999999999999999999 8899999999999999 667899999999998765322 22
Q ss_pred ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCC
Q 002155 841 TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTAD 920 (959)
Q Consensus 841 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (959)
....||+.|+|||++.+..++.++|||||||++|||++|..||...... ............ ..+..
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~~---~~~~~---- 311 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-------ETLNNILACRWD---LEDEE---- 311 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHTCCC---SCSGG----
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhccCC---CChhh----
Confidence 3446999999999999888999999999999999999999999653211 111222211110 00111
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 921 SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 921 ~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.......+.+++.+||+.||++||+++|++++
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11223467889999999999999999999873
No 129
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3e-39 Score=355.86 Aligned_cols=266 Identities=24% Similarity=0.353 Sum_probs=211.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-----CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceecccccee--cCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-----PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS--FDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. .....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 35788899999999999999983 368899999998776666778999999999999999999999886 45568
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++++|.+++.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+.
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEEeecCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccce
Confidence 99999999999999998754 35899999999999999999999 8899999999999999999999999999998
Q ss_pred cccccccc--ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc-------cCCchHHHHHH
Q 002155 831 LISACETH--VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI-------EGGNLVGWVFQ 901 (959)
Q Consensus 831 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~-------~~~~~~~~~~~ 901 (959)
........ ......+|+.|+|||.+.+..++.++||||+|+++|||++|+.||....... ........+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE 255 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH
Confidence 76432221 2233467888999999988889999999999999999999999985432110 01111112222
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.+..... ......+...+.+++.+||+.||++|||++|++++|+++..
T Consensus 256 ~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 256 LLEEGQR---------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred HhhcccC---------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 2222211 11122334568899999999999999999999999998753
No 130
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6.3e-38 Score=359.34 Aligned_cols=235 Identities=20% Similarity=0.206 Sum_probs=173.3
Q ss_pred CccccCccchhhhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCC
Q 002155 12 PEELSDLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSES 91 (959)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~ 91 (959)
++.+..-.............+.-+..++++++|++|+|++|++.+ +| .++.+++|++|+|++|++++ +| ++.+++
T Consensus 12 ~~~~pd~~l~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~ 86 (457)
T 3bz5_A 12 NDWFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTN 86 (457)
T ss_dssp HHHCSSHHHHHHHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTT
T ss_pred ccccCcHHHHHHHHHhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCC
Confidence 344444444455555666677777889999999999999999985 56 69999999999999999995 44 889999
Q ss_pred CcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccc
Q 002155 92 LEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAAN 170 (959)
Q Consensus 92 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~ 170 (959)
|++|++++|++++. + |+++++|++|++++|.+.+. | +..+ +|++|++++|++++. .+..+++|++|++++
T Consensus 87 L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~ 157 (457)
T 3bz5_A 87 LTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHL 157 (457)
T ss_dssp CSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTT
T ss_pred CCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCC
Confidence 99999999999975 2 88999999999999988763 3 3443 588888888888764 266677777777777
Q ss_pred cccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCc
Q 002155 171 NLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIP 250 (959)
Q Consensus 171 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 250 (959)
|...+.+ .++.+++|++|++++|++++ +| +..+++|+.|++++|.+++. .++.+++|++|++++|+++++ |
T Consensus 158 n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p 228 (457)
T 3bz5_A 158 NKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D 228 (457)
T ss_dssp CSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C
T ss_pred CCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C
Confidence 7443343 46667777777777777774 33 66777777777777777654 266677777777777777763 3
Q ss_pred hhhhcccCCCeeEcccccCCC
Q 002155 251 EKIADLAQLQCLVLSHNNLSG 271 (959)
Q Consensus 251 ~~~~~l~~L~~L~Ls~N~l~~ 271 (959)
+..+++|+.|++++|++++
T Consensus 229 --~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 229 --VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp --CTTCTTCSEEECCSSCCSC
T ss_pred --ccccCCCCEEEeeCCcCCC
Confidence 6666777777777776653
No 131
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.5e-39 Score=356.50 Aligned_cols=252 Identities=23% Similarity=0.346 Sum_probs=199.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCC-------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE------- 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------- 748 (959)
.++|++.+.||+|+||.||+|+++ +|+.||||++.... ....+.+.+|+.++++++||||++++++|.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457889999999999999999976 78999999986433 334567899999999999999999999885443
Q ss_pred --------------------------------------------------ceEEEEEeccCCCHHHHHhhhcCCccccCH
Q 002155 749 --------------------------------------------------EKLLVYEYMVNGSLDLWLRNRTGSLEVLGW 778 (959)
Q Consensus 749 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~ 778 (959)
..++||||+++|+|.+++..... .....+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 27999999999999999987542 344677
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc-----------cccccccccc
Q 002155 779 DKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET-----------HVSTDIAGTF 847 (959)
Q Consensus 779 ~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~gt~ 847 (959)
..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 789999999999999999 88999999999999999999999999999987654321 1223456999
Q ss_pred cccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHH
Q 002155 848 GYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLK 927 (959)
Q Consensus 848 ~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (959)
.|+|||.+.+..++.++||||+||++|||++|..|+.. ............ .+.........
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~~~~~~~~~---------~~~~~~~~~~~ 301 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRIITDVRNLK---------FPLLFTQKYPQ 301 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHHHHHHHTTC---------CCHHHHHHCHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHHHHHhhccC---------CCcccccCChh
Confidence 99999999999999999999999999999998776421 001111111111 01112234456
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 928 MLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 928 l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+.+++.+||+.||++|||++|++++
T Consensus 302 ~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 302 EHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCCCCcCCCHHHHhhc
Confidence 7889999999999999999999874
No 132
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=362.68 Aligned_cols=271 Identities=21% Similarity=0.276 Sum_probs=212.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCC--ceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE--EKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv 753 (959)
.++|++.++||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357889999999999999999976 58999999987543 334566789999999999999999999987655 67999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE----CCCCcEEEcccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL----NEEFEAKVADFGLA 829 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~~ 829 (959)
|||+++|+|.+++...... ..+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGT-TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 9999999999999765422 23899999999999999999999 8899999999999999 77788999999999
Q ss_pred cccccccccccccccccccccCCCcCCC--------CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQS--------GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ +..
T Consensus 164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~---~~~ 238 (396)
T 4eut_A 164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV---MYK 238 (396)
T ss_dssp EECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHH---HHH
T ss_pred eEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHH---HHH
Confidence 8765322 2234578999999998754 46788999999999999999999999654332222222 222
Q ss_pred HhhcCccc-------------ccc-CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAA-------------DVL-DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~-------------~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
........ .+. ...............+.+++.+||+.||++||++.|+++.++++.
T Consensus 239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp HHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred HhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 22211100 000 001112234778888999999999999999999999999998874
No 133
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=7.8e-39 Score=351.84 Aligned_cols=249 Identities=26% Similarity=0.353 Sum_probs=194.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc----CCCCEEEEEEccccc----hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL----PDGKTVAVKKLSQAK----TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ......+.+|+.+++.++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46788999999999999999986 468999999987542 2234557789999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 999999999999999998754 5788999999999999999999 889999999999999999999999999999
Q ss_pred cccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+.....
T Consensus 169 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~-~~~~i~~~~~- 238 (327)
T 3a62_A 169 KESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-------K-TIDKILKCKL- 238 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-------H-HHHHHHHTCC-
T ss_pred cccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-------H-HHHHHHhCCC-
Confidence 7543221 2233457999999999999889999999999999999999999999653211 1 1122221111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
.. +......+.+++.+||+.||++|| +++|++++
T Consensus 239 -----~~----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 -----NL----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp -----CC----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred -----CC----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 00 111234678899999999999999 78888764
No 134
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.5e-39 Score=360.62 Aligned_cols=267 Identities=19% Similarity=0.224 Sum_probs=202.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCC------CCEEEEEEccccchhh-----------HHHHHHHHHHHhcCCCCceec
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPD------GKTVAVKKLSQAKTQG-----------HREFTAEMETLGKVKHQNLVP 739 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~ 739 (959)
..++|++.+.||+|+||.||+|++.+ ++.||||++....... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999998764 4789999986543211 112335666778889999999
Q ss_pred cccceecC----CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 740 LLGYCSFD----EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 740 ~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
+++++... ...++||||+ +++|.+++.... ..+++.+++.++.||+.||+||| +.||+||||||+||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEE
Confidence 99998664 4579999999 999999998753 35899999999999999999999 7899999999999999
Q ss_pred C--CCCcEEEcccccccccccccccc------cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 002155 816 N--EEFEAKVADFGLARLISACETHV------STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEF 887 (959)
Q Consensus 816 ~--~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~ 887 (959)
+ .++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 8 88999999999998764322211 123459999999999999999999999999999999999999996432
Q ss_pred ccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 888 KDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+ .............. .....++.... ......+.+++..||+.||++||+++++++.|+++.
T Consensus 266 ~~---~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 266 KD---PKYVRDSKIRYREN-IASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp TC---HHHHHHHHHHHHHC-HHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred cC---HHHHHHHHHHhhhh-HHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 22 11111111111111 11111111100 112346788999999999999999999999998874
No 135
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.4e-38 Score=359.30 Aligned_cols=267 Identities=20% Similarity=0.256 Sum_probs=203.1
Q ss_pred hcCCCCCCeeccC--CCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDG--GFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.++||+| +||.||+|++. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999976 68999999987543 3345668889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++..... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999999987532 34889999999999999999999 889999999999999999999999999998654
Q ss_pred ccccc------cccccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 833 SACET------HVSTDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 833 ~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ...........
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~ 255 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ---MLLEKLNGTVP 255 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT---HHHHC------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH---HHHHHhcCCCC
Confidence 32111 11123468899999999887 578999999999999999999999996532211 00000000000
Q ss_pred c----------------------Ccccccc-----Cc----cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 K----------------------GQAADVL-----DP----TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 ~----------------------~~~~~~~-----~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ....... .+ .............+.+++.+||+.||++|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0 0000000 00 00001122344568899999999999999999999875
No 136
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=345.81 Aligned_cols=254 Identities=28% Similarity=0.463 Sum_probs=197.6
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
++|++.+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 56888999999999999999984 788999998643 34567889999999999999999999886 45899999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc-EEEcccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE-AKVADFGLARLISACET 837 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfg~~~~~~~~~~ 837 (959)
+|+|.+++.... ....+++..++.++.|+++|++|||+....||+||||||+||+++.++. +||+|||.+......
T Consensus 83 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 83 GGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 999999998643 2234788999999999999999999322289999999999999988876 799999999765321
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVL 917 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (959)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...... ... +........ .+...
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~-~~~~~~~~~-----~~~~~ 226 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP-----AFR-IMWAVHNGT-----RPPLI 226 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS-----HHH-HHHHHHTTC-----CCCCB
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc-----HHH-HHHHHhcCC-----CCCcc
Confidence 22346899999999999999999999999999999999999998643211 111 111111111 11111
Q ss_pred CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 918 TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 918 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .....+.+++.+||+.||++|||++++++.|+++.
T Consensus 227 ~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 227 K----NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred c----ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 1 22346788999999999999999999999999875
No 137
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=354.16 Aligned_cols=266 Identities=26% Similarity=0.375 Sum_probs=197.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHH--HHHHHhcCCCCceecccccee-----cCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTA--EMETLGKVKHQNLVPLLGYCS-----FDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~--e~~~l~~l~h~niv~~~~~~~-----~~~~~ 750 (959)
.++|++.+.||+|+||.||+|+. +++.||||++..... ..+.. |+..+..++||||+++++++. .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 36788899999999999999987 689999999864432 23333 444455689999999987442 23356
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC---------CeEeCCCCCCCEEECCCCcE
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP---------HIIHRDIKASNILLNEEFEA 821 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~---------~ivH~dlk~~Nill~~~~~~ 821 (959)
++||||+++|+|.+++.... .++..++.++.|++.||+||| +. ||+||||||+||+++.++.+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred EEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcE
Confidence 89999999999999997654 588899999999999999999 77 99999999999999999999
Q ss_pred EEccccccccccccc-------ccccccccccccccCCCcCCC-------CCCCCcCcchhHHHHHHHHHhCCCCCCCCC
Q 002155 822 KVADFGLARLISACE-------THVSTDIAGTFGYIPPEYGQS-------GRSTTRGDVYSFGVILLELVTGKEPTGPEF 887 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~elltg~~p~~~~~ 887 (959)
||+|||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 999999998664321 111224469999999999876 355678999999999999999988775433
Q ss_pred ccccCCch----------HHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 888 KDIEGGNL----------VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 888 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
........ ................+ +. ...........+.+++.+||+.||++|||++|+++.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKF-PE-AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCC-CT-TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCC-Cc-ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 22111110 11111111111111110 11 11223446678999999999999999999999999999874
No 138
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.7e-39 Score=353.08 Aligned_cols=261 Identities=29% Similarity=0.442 Sum_probs=210.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46788899999999999999984 246789999987543 33456788999999999 99999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCC--------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGS--------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
.++||||+++|+|.+++...... ...+++.+++.++.|++.||+||| +.|++||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 99999999999999999875421 224899999999999999999999 8899999999999999
Q ss_pred CCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCC
Q 002155 816 NEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGG 893 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 893 (959)
+.++.+||+|||.+......... ......+|+.|+|||.+.+..++.++||||+|+++|||++ |..||......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---- 254 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---- 254 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch----
Confidence 99999999999999876543222 1233457889999999888899999999999999999999 99998653221
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
......+..... +.. .......+.+++.+||+.||++|||++|++++|+++.
T Consensus 255 ---~~~~~~~~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 255 ---SKFYKMIKEGFR-----MLS----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp ---HHHHHHHHHTCC-----CCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---hHHHHHhccCCC-----CCC----cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 112222222111 100 1122346788999999999999999999999999874
No 139
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-38 Score=343.90 Aligned_cols=254 Identities=25% Similarity=0.354 Sum_probs=198.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|.+.+.||+|+||.||+|+.. ++..||+|++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 357889999999999999999875 68899999987543 3345778999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE---CCCCcEEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~ 832 (959)
|+++|+|.+++.........+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999998765333346899999999999999999999 8899999999999999 45678999999999765
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... .......||+.|+|||.+. ..++.++||||+|+++|||++|+.||...... .+.............
T Consensus 178 ~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--------~~~~~~~~~~~~~~~ 246 (285)
T 3is5_A 178 KSD--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--------EVQQKATYKEPNYAV 246 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCC
T ss_pred CCc--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--------HHHhhhccCCccccc
Confidence 432 2233457899999999875 56899999999999999999999998653211 111111111111000
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .......+.+++.+||+.||++|||++|++++
T Consensus 247 ---~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 247 ---E----CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ---------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ---c----cCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 01123467789999999999999999999864
No 140
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.8e-39 Score=347.63 Aligned_cols=256 Identities=30% Similarity=0.450 Sum_probs=208.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|++.+++.||||++.... ...+.+.+|++++++++||||+++++++. ++..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 35788899999999999999998888899999987543 23567889999999999999999999886 45689999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++++|.+++.... ...+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+........
T Consensus 90 ~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 90 ENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp TTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred CCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 9999999997542 125889999999999999999999 88999999999999999999999999999987654333
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||.+.+..++.++||||+|+++|||++ |..||...... .+...+..... +..
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~-----~~~ 231 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--------EVIQNLERGYR-----MVR 231 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC-----CCC
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--------HHHHHHhcccC-----CCC
Confidence 33334457789999999888889999999999999999999 89998643211 12222222211 111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.......+.+++.+||+.||++|||+.++++.|+++.
T Consensus 232 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 232 ----PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 1122346888999999999999999999999999874
No 141
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.4e-39 Score=355.57 Aligned_cols=260 Identities=30% Similarity=0.455 Sum_probs=208.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC--------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFD 747 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 747 (959)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+++++++ +||||+++++++..+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467889999999999999999863 46789999987543 34456788999999999 899999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCC------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGS------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
+..++||||+++|+|.+++...... ...+++.+++.++.|++.||+||| +.||+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 9999999999999999999875421 234889999999999999999999 8899999999999999
Q ss_pred CCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCC
Q 002155 816 NEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGG 893 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 893 (959)
+.++.+||+|||.++........ ......+++.|+|||++.+..++.++||||+|+++|||++ |..||.....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----- 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-----
Confidence 99999999999999866532221 1223456789999999888889999999999999999999 9999864311
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+...+...... .. ...+...+.+++.+||+.||++||+++|+++.|+++.
T Consensus 266 ---~~~~~~~~~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 266 ---EELFKLLKEGHRM-----DK----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp ---HHHHHHHHHTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHHHhcCCCC-----CC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1122222222111 11 1123346788999999999999999999999999874
No 142
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=363.73 Aligned_cols=347 Identities=20% Similarity=0.159 Sum_probs=224.7
Q ss_pred EEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEccccc
Q 002155 165 EFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN 244 (959)
Q Consensus 165 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 244 (959)
.++.+++.++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.|+++.|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 4556666665 4554442 466666666666666556666666666666666666666666666666666666666666
Q ss_pred CCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEc
Q 002155 245 LSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLL 324 (959)
Q Consensus 245 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L 324 (959)
++.+.+..|..+++|++|+|++|++. +..+..+..+++|+.|++
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~------------------------------------~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIV------------------------------------ILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCC------------------------------------EECTTTTTTCTTCCEEEE
T ss_pred CCccCcccccCCCCCCEEECCCCccc------------------------------------cCChhHccccccCCEEEC
Confidence 66555555666666666666655543 123344555555666666
Q ss_pred cCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCC
Q 002155 325 NNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGK 404 (959)
Q Consensus 325 ~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 404 (959)
++|.+++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+.
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~ 215 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDT 215 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCE
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccc
Confidence 66666555555566666666666666665554444555555555555555555555555555555555555555554444
Q ss_pred CCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCcccc
Q 002155 405 VPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLG 484 (959)
Q Consensus 405 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~ 484 (959)
.+.......+|++|++++|+++...+..+..+++|+.|+|++|++ ++..+..|.
T Consensus 216 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l--------------------------~~~~~~~~~ 269 (477)
T 2id5_A 216 MTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPI--------------------------STIEGSMLH 269 (477)
T ss_dssp ECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCC--------------------------CEECTTSCT
T ss_pred cCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcC--------------------------CccChhhcc
Confidence 444433344555555555555533334455555555555555554 444556677
Q ss_pred CccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCcccc
Q 002155 485 NLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKIS 564 (959)
Q Consensus 485 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~ 564 (959)
++++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|++.+..+..+.......+.
T Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~ 349 (477)
T 2id5_A 270 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLN 349 (477)
T ss_dssp TCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSC
T ss_pred ccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccc
Confidence 88999999999999998889999999999999999999998888888999999999999999998766555555566677
Q ss_pred ccCCCCCCCCCC
Q 002155 565 LTGNKDLCGKII 576 (959)
Q Consensus 565 l~~N~~~c~~~~ 576 (959)
+.++...|+.|.
T Consensus 350 ~~~~~~~C~~p~ 361 (477)
T 2id5_A 350 FNRQQPTCATPE 361 (477)
T ss_dssp CTTCCCBEEESG
T ss_pred cCccCceeCCch
Confidence 888888886543
No 143
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=340.70 Aligned_cols=250 Identities=27% Similarity=0.434 Sum_probs=183.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46788999999999999999986 478999999986432 22346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... ..+++..++.++.|+++|++||| +.|++||||||+||+++.++.+||+|||.+....
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 99999999999998643 35889999999999999999999 8899999999999999999999999999997654
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||........ ...... .....
T Consensus 164 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~---~~~~~ 231 (278)
T 3cok_A 164 MPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--------LNKVVL---ADYEM 231 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCS---SCCCC
T ss_pred CCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--------HHHHhh---cccCC
Confidence 3221 22235689999999999988899999999999999999999999865322110 001100 01101
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ ......+.+++.+||+.||++|||+++++++
T Consensus 232 ~-------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 232 P-------SFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp C-------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c-------cccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1 1123467889999999999999999999863
No 144
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=9.1e-39 Score=369.75 Aligned_cols=256 Identities=23% Similarity=0.325 Sum_probs=207.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.++||+|+||.||+|+.+ +|+.||+|++.... ......+..|+.++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367889999999999999999975 68999999986542 23346688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||++||+|.+++.........+++..++.++.||+.||+||| +.||+||||||+||+++.++++||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999999875544456899999999999999999999 8899999999999999999999999999998764
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+...+......
T Consensus 341 ~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~----~~~~~~~i~~~~~~---- 411 (543)
T 3c4z_A 341 AGQ-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE----NKELKQRVLEQAVT---- 411 (543)
T ss_dssp TTC-CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC----HHHHHHHHHHCCCC----
T ss_pred CCC-cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh----HHHHHHHHhhcccC----
Confidence 322 222345899999999999999999999999999999999999999976432211 11222222221110
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM-----LHVLK 951 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~ell~ 951 (959)
.+......+.+++.+||+.||++||++ +++++
T Consensus 412 ------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 412 ------YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ------CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ------CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 011233467889999999999999964 66664
No 145
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=6.5e-39 Score=371.37 Aligned_cols=254 Identities=26% Similarity=0.361 Sum_probs=207.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.++||+|+||.||+|+.+ +|+.||+|++.... ......+.+|+.+++.++||||+++++++.+++..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999875 68999999986532 23345678999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||++||+|.+++.... ...+++..++.++.||+.||+||| +.||+||||||+||+++.++++||+|||+++...
T Consensus 263 mEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp ECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 99999999999997643 234899999999999999999999 8899999999999999999999999999998764
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... .....+||+.|+|||++.+..++.++||||+||++|||++|..||........ ...+...+......
T Consensus 338 ~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~----~~~i~~~i~~~~~~---- 407 (576)
T 2acx_A 338 EGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----REEVERLVKEVPEE---- 407 (576)
T ss_dssp TTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC----HHHHHHHHHHCCCC----
T ss_pred cCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh----HHHHHHHhhccccc----
Confidence 322 22345899999999999998999999999999999999999999976432211 12222222221110
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
.+......+.+++.+||+.||++|| +++|++++
T Consensus 408 ------~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 408 ------YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ------CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ------CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0112334678899999999999999 78888764
No 146
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.2e-38 Score=339.02 Aligned_cols=251 Identities=23% Similarity=0.304 Sum_probs=205.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|++. ++..||+|++........+.+.+|++++++++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 467899999999999999999876 5779999999876666677899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE---CCCCcEEEcccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLIS 833 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~~ 833 (959)
+++++|.+++.... .+++.+++.++.|++.|++||| +.||+||||||+||++ +.++.+||+|||.+....
T Consensus 88 ~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 88 CTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp CCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 99999999987754 5889999999999999999999 8899999999999999 788999999999997765
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. .......||+.|+|||.+.+ .++.++||||+|+++|||++|..||...... .....+.......
T Consensus 161 ~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~--- 226 (277)
T 3f3z_A 161 PG--KMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--------EVMLKIREGTFTF--- 226 (277)
T ss_dssp TT--SCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCC---
T ss_pred Cc--cchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhCCCCC---
Confidence 32 22334578999999998765 4899999999999999999999998653211 1222222221110
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+... .......+.+++.+||+.||++||++.|++++
T Consensus 227 ~~~~---~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 227 PEKD---WLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp CHHH---HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred Cchh---hhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00123467889999999999999999999863
No 147
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.9e-38 Score=352.63 Aligned_cols=261 Identities=23% Similarity=0.248 Sum_probs=201.5
Q ss_pred HHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-----chhhHHHHHHHHHHHhcCCCCceeccccceecCC
Q 002155 675 LEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-----KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE 748 (959)
Q Consensus 675 ~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 748 (959)
....++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|++++++++||||+++++++.+++
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 346678999999999999999999875 6889999998643 2344567889999999999999999999999999
Q ss_pred ceEEEEEeccCCCHHHHHhhhcC------------------------------------CccccCHHHHHHHHHHHHHHH
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTG------------------------------------SLEVLGWDKRYKIACGAARGL 792 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~------------------------------------~~~~l~~~~~~~i~~~i~~~l 792 (959)
..++||||+++|+|.+++..... ....+++..++.++.|++.|+
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 99999999999999999852110 012346778889999999999
Q ss_pred HHHHhcCCCCeEeCCCCCCCEEECCCC--cEEEcccccccccccccc---cccccccccccccCCCcCCC--CCCCCcCc
Q 002155 793 AFLHHGFTPHIIHRDIKASNILLNEEF--EAKVADFGLARLISACET---HVSTDIAGTFGYIPPEYGQS--GRSTTRGD 865 (959)
Q Consensus 793 ~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfg~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~~D 865 (959)
+||| +.||+||||||+||+++.++ .+||+|||+++....... .......||+.|+|||++.+ ..++.++|
T Consensus 182 ~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 9999 78999999999999998776 899999999986543221 12344578999999998865 67899999
Q ss_pred chhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 002155 866 VYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT 945 (959)
Q Consensus 866 vwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 945 (959)
|||+||++|||++|+.||...... .............. .+ ........+.+++.+||+.||++||+
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDA-------DTISQVLNKKLCFE--NP-----NYNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCTT--SG-----GGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcccccC--Cc-----ccccCCHHHHHHHHHHcCCChhHCCC
Confidence 999999999999999998653221 11222222111100 00 11123346788999999999999999
Q ss_pred HHHHHHH
Q 002155 946 MLHVLKF 952 (959)
Q Consensus 946 ~~ell~~ 952 (959)
+.|++++
T Consensus 325 ~~~~l~h 331 (345)
T 3hko_A 325 AMRALQH 331 (345)
T ss_dssp HHHHHHS
T ss_pred HHHHhcC
Confidence 9999874
No 148
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.2e-39 Score=357.45 Aligned_cols=261 Identities=27% Similarity=0.431 Sum_probs=205.3
Q ss_pred CCCCCeeccCCCeEEEEEEcC-----CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecC--CceEE
Q 002155 681 FCKTNIIGDGGFGTVYKAALP-----DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD--EEKLL 752 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 752 (959)
|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998643 57899999987543 34456789999999999999999999999774 56799
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... +++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 113 v~e~~~~~~L~~~l~~~~-----~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-----CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhhCC-----CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCccccccc
Confidence 999999999999997643 889999999999999999999 889999999999999999999999999999876
Q ss_pred ccccc--cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc------cCCc-hHHHHHHHh
Q 002155 833 SACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI------EGGN-LVGWVFQKM 903 (959)
Q Consensus 833 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~------~~~~-~~~~~~~~~ 903 (959)
..... .......++..|+|||++.+..++.++||||+|+++|||++|+.||....... .... ....+...+
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL 264 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHH
Confidence 54322 12233467889999999988889999999999999999999999986432110 0000 000111111
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.... .......+...+.+++.+||+.||++|||++|+++.|+++..
T Consensus 265 ~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 265 ERGE---------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccc---------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 1111 111122334578899999999999999999999999998853
No 149
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=345.49 Aligned_cols=245 Identities=24% Similarity=0.301 Sum_probs=192.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.++||+|+||+||+|++. +|+.||||++.... ......+..|+..+..+ +||||++++++|.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999976 78999999876432 22333445555555554 8999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+ +++|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 137 e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp ECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred ecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999 679999887764 35899999999999999999999 78999999999999999999999999999976643
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
. .......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ....+..... .+
T Consensus 210 ~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~-----------~~~~~~~~~~----~~ 271 (311)
T 3p1a_A 210 A--GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-----------GWQQLRQGYL----PP 271 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-----------HHHHHTTTCC----CH
T ss_pred C--CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc-----------HHHHHhccCC----Cc
Confidence 2 22334568999999998875 78999999999999999999977754310 1122222111 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ......+.+++.+||+.||++|||++|++++
T Consensus 272 ~~~----~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 272 EFT----AGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccc----cCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 111 1123468889999999999999999999874
No 150
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.7e-39 Score=350.86 Aligned_cols=257 Identities=25% Similarity=0.378 Sum_probs=195.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCce---
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK--- 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--- 750 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++.... ......+.+|+.++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46788999999999999999996 478999999987542 23345688999999999999999999998765543
Q ss_pred -EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 751 -LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 751 -~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
|+||||+++++|.++++... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 99999999999999998754 5889999999999999999999 889999999999999999999999999999
Q ss_pred cccccccc--cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 830 RLISACET--HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 830 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
+....... .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ............
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-------~~~~~~~~~~~~ 236 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-------VSVAYQHVREDP 236 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHCCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHhcCCC
Confidence 86643222 122335689999999999988999999999999999999999999965321 111222222211
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH-HHHh
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK-FLKE 955 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~-~L~~ 955 (959)
. .+... .......+.+++.+||+.||++||++.++++ .+.+
T Consensus 237 ~----~~~~~---~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 237 I----PPSAR---HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp C----CHHHH---STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred C----Ccccc---cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 1 01000 1113346788999999999999997666554 4433
No 151
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.2e-38 Score=357.53 Aligned_cols=252 Identities=21% Similarity=0.272 Sum_probs=191.4
Q ss_pred cCCCCC-CeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHh-cCCCCceeccccceec----CCceE
Q 002155 679 NNFCKT-NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLG-KVKHQNLVPLLGYCSF----DEEKL 751 (959)
Q Consensus 679 ~~f~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~----~~~~~ 751 (959)
++|.+. ++||+|+||+||+|++. +++.||||++... ..+.+|+.++. ..+||||++++++|.. +...|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456665 68999999999999875 6889999998632 34567888764 4589999999998865 56789
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADFGL 828 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~ 828 (959)
+||||+++|+|.+++.... ...+++.+++.++.||+.||+||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 136 lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence 9999999999999998643 235899999999999999999999 789999999999999987 78999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|..||............. ..+..+..
T Consensus 211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~----~~i~~~~~ 284 (400)
T 1nxk_A 211 AKETTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK----TRIRMGQY 284 (400)
T ss_dssp CEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHH----HHHHHTCC
T ss_pred ccccCCC--CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHH----HHHHcCcc
Confidence 9865422 22334578999999999999999999999999999999999999997543321111121 22222111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. +. .........+.+++.+||+.||++|||++|++++
T Consensus 285 ~~---~~---~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 285 EF---PN---PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CC---CT---TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cC---CC---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 10 10 0112234567899999999999999999999975
No 152
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-38 Score=363.59 Aligned_cols=247 Identities=25% Similarity=0.388 Sum_probs=204.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|.+.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57888999999999999999875 79999999986542 223467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++|+|.+++.... .+++..++.++.||+.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 96 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICKNG----RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTSSS----SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 9999999999997543 5899999999999999999999 89999999999999999999999999999987643
Q ss_pred ccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. ......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... . .....+..+... .
T Consensus 169 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-------~-~~~~~i~~~~~~---~ 235 (476)
T 2y94_A 169 G--EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-------P-TLFKKICDGIFY---T 235 (476)
T ss_dssp T--CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-------H-HHHHHHHTTCCC---C
T ss_pred c--ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-------H-HHHHHHhcCCcC---C
Confidence 2 22334579999999999888776 6899999999999999999999964321 1 122222222110 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
| ......+.+++.+||+.||++|||++|++++
T Consensus 236 p-------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 236 P-------QYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp C-------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred C-------ccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1 1122467889999999999999999999874
No 153
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.2e-38 Score=354.78 Aligned_cols=245 Identities=23% Similarity=0.301 Sum_probs=192.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHH-HhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMET-LGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.++||+|+||.||+|+.+ +++.||+|++.+.. ......+..|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467999999999999999999976 58899999987543 2223445667666 577899999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++++||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 999999999999998754 5788999999999999999999 889999999999999999999999999999764
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... .......+||+.|+|||++.+..++.++||||+||++|||++|..||..... . .+...+...... +
T Consensus 190 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-------~-~~~~~i~~~~~~--~ 258 (373)
T 2r5t_A 190 IEH-NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-------A-EMYDNILNKPLQ--L 258 (373)
T ss_dssp BCC-CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-------H-HHHHHHHHSCCC--C
T ss_pred ccC-CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-------H-HHHHHHHhcccC--C
Confidence 322 2233456899999999999999999999999999999999999999965321 1 122222222110 0
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLH 948 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 948 (959)
+ ......+.+++.+||+.||++||++.+
T Consensus 259 -~-------~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 259 -K-------PNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp -C-------SSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred -C-------CCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 1 112346788999999999999999853
No 154
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.8e-38 Score=347.02 Aligned_cols=252 Identities=23% Similarity=0.304 Sum_probs=204.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh------hHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ------GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +|+.||+|++...... ..+.+.+|+.++++++||||+++++++..++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 457899999999999999999875 6899999998653221 356789999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC----cEEEccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF----EAKVADF 826 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Df 826 (959)
++||||+++++|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS----CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 99999999999999997643 5889999999999999999999 88999999999999999887 7999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
|.+...... .......||+.|+|||++.+..++.++||||+|+++|||++|..||...... . ....+...
T Consensus 164 g~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~-~~~~i~~~ 233 (321)
T 2a2a_A 164 GLAHEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------E-TLANITSV 233 (321)
T ss_dssp TTCEECCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------H-HHHHHHTT
T ss_pred ccceecCcc--ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-------H-HHHHHHhc
Confidence 999876532 2223456899999999999899999999999999999999999998643211 1 11122211
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ..++.... .....+.+++.+||+.||++|||++|++++
T Consensus 234 ~~--~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 234 SY--DFDEEFFS----HTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CC--CCCHHHHT----TCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cc--ccChhhhc----ccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 10 01111111 122457889999999999999999999874
No 155
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.4e-38 Score=338.07 Aligned_cols=252 Identities=25% Similarity=0.359 Sum_probs=204.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999875 58999999986532 334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc---EEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE---AKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~~~~ 831 (959)
||+++++|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++. +||+|||.+..
T Consensus 85 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999999887654 5889999999999999999999 889999999999999986655 99999999976
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... .....+.......
T Consensus 158 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~- 226 (284)
T 3kk8_A 158 VNDS--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQIKAGAYDY- 226 (284)
T ss_dssp CCSS--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCC-
T ss_pred cccC--ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--------HHHHHHHhccccC-
Confidence 6432 2223457899999999999999999999999999999999999998643211 1222222221110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+. .........+.+++.+||+.||++|||++|++++
T Consensus 227 --~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 227 --PS---PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp --CT---TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred --Cc---hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 10 0111233467889999999999999999999874
No 156
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-38 Score=341.12 Aligned_cols=246 Identities=23% Similarity=0.358 Sum_probs=180.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999864 68999999986532 333567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+ ++++.+++.... .+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+.....
T Consensus 93 e~~-~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHTSS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 668888887643 5889999999999999999999 88999999999999999999999999999976543
Q ss_pred ccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. ......||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||..... ......+......
T Consensus 165 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~---- 230 (275)
T 2eue_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--------PVLFKNISNGVYT---- 230 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCC----
T ss_pred cc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCC----
Confidence 22 2234468999999999887765 7899999999999999999999865321 1122222222110
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. +......+.+++.+||+.||++|||++|++++
T Consensus 231 --~----~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 231 --L----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp --C----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --C----CccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 0 11123457889999999999999999999864
No 157
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.9e-39 Score=352.23 Aligned_cols=266 Identities=26% Similarity=0.396 Sum_probs=209.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-----CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCC--ce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-----PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE--EK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~ 750 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35688899999999999999983 368899999998766666778999999999999999999999886544 78
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++++|.+++.... ..+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||.+.
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EEEECCCTTCBHHHHHHHST---TSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEECCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 99999999999999998754 35889999999999999999999 8899999999999999999999999999998
Q ss_pred ccccccccc--cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc-------cC-CchHHHHH
Q 002155 831 LISACETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI-------EG-GNLVGWVF 900 (959)
Q Consensus 831 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~-------~~-~~~~~~~~ 900 (959)
......... .....++..|+|||.+.+..++.++||||+|+++|||++|..||....... .. ......+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 765432211 223456778999999888889999999999999999999999975421100 00 00111111
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+.+..... + .....+...+.+++.+||+.||++|||++|+++.|++++.
T Consensus 274 ~~~~~~~~-----~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 274 ELLKNNGR-----L----PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHTTCC-----C----CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhhcCCC-----C----CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 22221111 1 1112234568889999999999999999999999999864
No 158
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3e-38 Score=342.95 Aligned_cols=262 Identities=19% Similarity=0.272 Sum_probs=202.6
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccce-ecCCceEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC-SFDEEKLLVY 754 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~ 754 (959)
..++|++.+.||+|+||.||+|++ .+++.||||++..... ...+.+|+.+++.++|++++..++++ ..++..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999986 4788999998654322 23477899999999988877776655 5667789999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE---CCCCcEEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~ 831 (959)
||+ +++|.+++.... ..+++..++.++.|++.|++||| +.||+||||||+||++ +.++.+||+|||.++.
T Consensus 85 e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Ecc-CCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 999 999999998543 35899999999999999999999 8899999999999999 7889999999999987
Q ss_pred ccccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 832 ISACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 832 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
....... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||......................
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence 6543221 2234578999999999999999999999999999999999999997643332222222211111111
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .. ... ......+.+++.+||+.||++|||++++++.|+++.
T Consensus 238 ~-~~-----~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 238 P-IE-----VLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp C-HH-----HHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred h-hh-----hhh----ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 0 00 000 112346889999999999999999999999999874
No 159
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.5e-39 Score=355.90 Aligned_cols=255 Identities=27% Similarity=0.457 Sum_probs=200.5
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCE----EEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKT----VAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|++.++||+|+||.||+|++. +++. ||+|.+.... ......+.+|+.+++.++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57888999999999999999864 4443 7778765332 223345678999999999999999999886 567899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSSG---GGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHcc---ccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCccccc
Confidence 999999999999997643 35788999999999999999999 889999999999999999999999999999876
Q ss_pred cccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 833 SACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 833 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
...... ......++..|+|||.+.+..++.++||||+||++|||++ |..||...... . +...+......
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~----~~~~~~~~~~~- 236 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA----E----VPDLLEKGERL- 236 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT----H----HHHHHHTTCBC-
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH----H----HHHHHHcCCCC-
Confidence 543222 2234467889999999988899999999999999999999 99998653211 1 12222222111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+.. +...+.+++.+||+.||++||++++++++|+++.
T Consensus 237 -~~~~~-------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 237 -AQPQI-------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp -CCCTT-------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred -CCCCc-------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111 1224678899999999999999999999999874
No 160
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-39 Score=346.84 Aligned_cols=256 Identities=23% Similarity=0.383 Sum_probs=205.9
Q ss_pred cCCCCCC-eeccCCCeEEEEEEcC---CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 679 NNFCKTN-IIGDGGFGTVYKAALP---DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
++|.+.+ .||+|+||.||+|.+. ++..||||++.... ....+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4555555 8999999999999854 57789999987643 34566788999999999999999999998 55679999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... ..+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+|||.+....
T Consensus 88 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHhCC---ccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 99999999999997543 35889999999999999999999 8899999999999999999999999999998764
Q ss_pred cccccc--cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 834 ACETHV--STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 834 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
...... .....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... . +...+..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~----~~~~i~~~~~-- 231 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----E----VMAFIEQGKR-- 231 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH----H----HHHHHHTTCC--
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH----H----HHHHHhcCCc--
Confidence 332221 123356889999999888889999999999999999998 99998653211 1 1222222211
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+.. +......+.+++.+||+.||++||++.+++++|+++..
T Consensus 232 ---~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 232 ---MEC----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp ---CCC----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCC----CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111 11233568889999999999999999999999998753
No 161
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.2e-38 Score=342.63 Aligned_cols=261 Identities=19% Similarity=0.270 Sum_probs=205.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccce-ecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYC-SFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++..... .+.+.+|+.+++.++|++++..+.++ ..++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 56899999999999999999996 4789999999865432 24588999999999998877666655 56677899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC---CCCcEEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN---EEFEAKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~~~ 832 (959)
|+ +++|.+++.... ..+++.+++.++.|++.|++||| +.||+||||||+||+++ .++.+||+|||.+...
T Consensus 86 ~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred ec-CCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99 899999997543 35899999999999999999999 88999999999999994 7889999999999876
Q ss_pred cccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 833 SACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 833 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .....+.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~ 237 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMST 237 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHHHS
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh-hhhhhhcccccCC
Confidence 543221 123457899999999999999999999999999999999999999764332222 2222222211111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
... ... ......+.+++.+||+.||++|||++++++.|+++.
T Consensus 238 ~~~-----~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 238 PIE-----VLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp CHH-----HHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred chH-----HHH----hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 000 000 112346888999999999999999999999999875
No 162
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=348.07 Aligned_cols=264 Identities=28% Similarity=0.328 Sum_probs=199.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-----hhhHHHHHHHHHHHhcCC---CCceeccccceecC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-----TQGHREFTAEMETLGKVK---HQNLVPLLGYCSFD 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~ 747 (959)
..++|++.+.||+|+||.||+|++. +++.||||++.... ......+.+|+.+++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3578999999999999999999964 68999999986432 112345667777777664 99999999998765
Q ss_pred C-----ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEE
Q 002155 748 E-----EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAK 822 (959)
Q Consensus 748 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 822 (959)
. ..++||||++ ++|.+++..... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEE
Confidence 5 4799999997 599999987542 34899999999999999999999 88999999999999999999999
Q ss_pred EcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 823 VADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 823 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|+|||.++..... .......||+.|+|||++.+..++.++||||+||++|||++|++||...... .....+...
T Consensus 161 l~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~ 234 (308)
T 3g33_A 161 LADFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA----DQLGKIFDL 234 (308)
T ss_dssp ECSCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH----HHHHHHHHH
T ss_pred EeeCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHH
Confidence 9999999866432 2234457899999999998899999999999999999999999999653221 112222222
Q ss_pred hhcCccccccCc---------cccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQAADVLDP---------TVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~~~~~~~---------~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+... ...+. ...+....+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 235 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 211111111000 00000 011234567889999999999999999999874
No 163
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.6e-38 Score=340.05 Aligned_cols=248 Identities=27% Similarity=0.418 Sum_probs=201.3
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
+.++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3467899999999999999999865 57799999986432 2234568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 999999999999998754 4889999999999999999999 899999999999999999999999999998654
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
.. .......|++.|+|||.+.+..++.++||||+|+++|||++|..||...... .....+.....
T Consensus 160 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~---- 224 (279)
T 3fdn_A 160 PS---SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--------ETYKRISRVEF---- 224 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCC----
T ss_pred Cc---ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--------HHHHHHHhCCC----
Confidence 32 2223457899999999999999999999999999999999999998643211 11222222111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. +......+.+++.+||+.||++|||++|++++
T Consensus 225 --~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 225 --TF----PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp --CC----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred --CC----CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 11123457789999999999999999999975
No 164
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.9e-39 Score=352.15 Aligned_cols=256 Identities=27% Similarity=0.444 Sum_probs=200.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCC-----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPD-----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
++|+..+.||+|+||.||+|++.. +..||||++.... ......+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467778999999999999998642 2369999987543 3345568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.++..
T Consensus 124 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKD---GEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEECCTTEEHHHHHHHTT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 999999999999998653 35889999999999999999999 789999999999999999999999999999876
Q ss_pred cccccc--ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 833 SACETH--VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 833 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
...... ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..... ..+...+..+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~~~~~~~~~- 268 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------HEVMKAINDGFR- 268 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCC-
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHCCCc-
Confidence 432211 1122346789999999988899999999999999999999 9999854321 112222222211
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
+. ........+.+++.+||+.||++||++.++++.|+++.
T Consensus 269 ----~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 269 ----LP----TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp ----CC----CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ----CC----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11 11123446788999999999999999999999999874
No 165
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=354.46 Aligned_cols=243 Identities=24% Similarity=0.336 Sum_probs=200.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--------hhHHHHHHHHHHHhcCCCCceeccccceecC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--------QGHREFTAEMETLGKVKHQNLVPLLGYCSFD 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 747 (959)
..++|++.+.||+|+||.||+|++. +++.||||++..... .....+.+|+.++++++||||+++++++..+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4578999999999999999999864 688999999865421 1233567899999999999999999999999
Q ss_pred CceEEEEEeccCC-CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 748 EEKLLVYEYMVNG-SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 748 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
+..++||||+.+| +|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP----RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 9999997653 5899999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
|+++...... ......||+.|+|||++.+..+ +.++||||+||++|||++|..||...... ...
T Consensus 175 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------~~~ 239 (335)
T 3dls_A 175 GSAAYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------VEA 239 (335)
T ss_dssp TTCEECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------TTT
T ss_pred ccceECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------Hhh
Confidence 9998765322 2234578999999999888877 78999999999999999999998642111 000
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....+. .....+.+++.+||+.||++|||++|++++
T Consensus 240 ----~~~~~~-------~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 ----AIHPPY-------LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----CCCCSS-------CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----ccCCCc-------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000111 123467889999999999999999999985
No 166
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-39 Score=358.58 Aligned_cols=256 Identities=30% Similarity=0.456 Sum_probs=193.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC--CC--CEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceec-CCceEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP--DG--KTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF-DEEKLL 752 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~--~~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~l 752 (959)
..|++.++||+|+||.||+|++. ++ ..||||.+... .....+.+.+|+.++++++||||+++++++.. ++..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 35677889999999999999863 22 36899988653 33456778999999999999999999998654 567899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.++++... ..+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 169 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEECCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEECCCCCCHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccc
Confidence 999999999999997654 34788999999999999999999 889999999999999999999999999999865
Q ss_pred cccccc---ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 833 SACETH---VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 833 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
...... ......+++.|+|||.+.+..++.++|||||||++|||++ |.+||.... ..+.... +..+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~----~~~~~~~----~~~~~~ 314 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----TFDITVY----LLQGRR 314 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC----SSCHHHH----HHTTCC
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC----HHHHHHH----HHcCCC
Confidence 432211 1223456789999999988899999999999999999999 566664321 1222222 221111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...| ..+...+.+++.+||+.||++||+++|+++.|+++.
T Consensus 315 --~~~p-------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 315 --LLQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp --CCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111 112346788999999999999999999999999874
No 167
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.8e-38 Score=342.35 Aligned_cols=258 Identities=29% Similarity=0.445 Sum_probs=201.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccce-ecCCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYC-SFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~ 751 (959)
..+|++.++||+|+||.||+|++.+ ...||+|.+.... ....+.+.+|+.++++++||||+++++++ ..++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3568888999999999999998642 2358999887533 34456788999999999999999999985 4556789
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+++|+|.++++... ..+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++.
T Consensus 104 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHHCTT---CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccc
Confidence 9999999999999997643 35788999999999999999999 88999999999999999999999999999986
Q ss_pred cccccc---cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCC-CCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 832 ISACET---HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGK-EPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 832 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
...... .......+|+.|+|||.+.+..++.++||||+|+++|||++|. +||... . ....... .....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~---~~~~~~~----~~~~~ 249 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-N---TFDITVY----LLQGR 249 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS-C---TTTHHHH----HHTTC
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC-C---HHHHHHH----HhcCC
Confidence 643221 1123345778999999998889999999999999999999955 454332 1 1122211 11111
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
. ...+ ......+.+++.+||+.||++|||++|+++.|+++..
T Consensus 250 ~--~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 250 R--LLQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp C--CCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C--CCCC-------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0 0111 1122468889999999999999999999999998853
No 168
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.9e-39 Score=354.08 Aligned_cols=252 Identities=22% Similarity=0.292 Sum_probs=200.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|+.+ +++.||||++...... ..+|++++.++ +||||+++++++.+++..|+|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 467999999999999999999875 6889999998754332 34688888887 79999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC----CcEEEcccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE----FEAKVADFGLARL 831 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~ 831 (959)
|+++|+|.+++.... .+++.++..++.||+.|++||| +.||+||||||+||++.++ +.+||+|||+++.
T Consensus 97 ~~~gg~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 97 LMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp CCCSCBHHHHHHTCT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred CCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 999999999997643 5899999999999999999999 8899999999999998543 3599999999987
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
..... .......||+.|+|||++.+..++.++||||+||++|||++|..||.....+ ....+...+..+....
T Consensus 170 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~~~~i~~~~~~~- 242 (342)
T 2qr7_A 170 LRAEN-GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-----TPEEILARIGSGKFSL- 242 (342)
T ss_dssp CBCTT-CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-----CHHHHHHHHHHCCCCC-
T ss_pred CcCCC-CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-----CHHHHHHHHccCCccc-
Confidence 64322 2233457899999999988878899999999999999999999999653211 1222333333322111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...........+.+++.+||+.||++||++.|++++
T Consensus 243 -----~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 243 -----SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp -----CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -----CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111112234567889999999999999999999864
No 169
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=356.39 Aligned_cols=251 Identities=22% Similarity=0.356 Sum_probs=195.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCC--CceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKH--QNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|+.++++++| |||+++++++..+...++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4678899999999999999999988999999998643 33445678899999999986 9999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|| +.+++|.+++.... .+++.++..++.|++.||+||| +.||+||||||+||+++ ++.+||+|||+++...
T Consensus 88 ~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHHSC----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 56789999998754 5888999999999999999999 88999999999999997 5789999999998764
Q ss_pred ccccc-ccccccccccccCCCcCCC-----------CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 834 ACETH-VSTDIAGTFGYIPPEYGQS-----------GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 834 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
..... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ......
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~ 232 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------ISKLHA 232 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH------HHHHHH
Confidence 33222 2234579999999998754 67889999999999999999999999643221 111222
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+....... .+ ......+.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~--~~-------~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 233 IIDPNHEIE--FP-------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHCTTSCCC--CC-------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhcCCcccC--Cc-------ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 221111110 01 1112357789999999999999999999875
No 170
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5.5e-37 Score=354.78 Aligned_cols=344 Identities=27% Similarity=0.389 Sum_probs=188.7
Q ss_pred ccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccC
Q 002155 139 LMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNS 218 (959)
Q Consensus 139 L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 218 (959)
++.|++++|.+.. +| .+..+++|++|++++|.+++..+ +.++++|++|++++|.+++..+ +.++++|++|++++
T Consensus 48 l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~ 121 (466)
T 1o6v_A 48 VTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 121 (466)
T ss_dssp CCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred ccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCC
Confidence 4555555555543 22 24445555555555555543222 4555555555555555543222 45555555555555
Q ss_pred CcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccce
Q 002155 219 NLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVF 298 (959)
Q Consensus 219 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l 298 (959)
|.+++..+ +..+++|++|++++|++++. + .+..+++|+.|+++ |
T Consensus 122 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~------------------------------- 165 (466)
T 1o6v_A 122 NQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-N------------------------------- 165 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-E-------------------------------
T ss_pred CCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-C-------------------------------
Confidence 55543221 44455555555555554432 1 24455555555543 2
Q ss_pred ecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccC
Q 002155 299 DLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT 378 (959)
Q Consensus 299 ~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 378 (959)
.+.+. ..+..+++|+.|++++|.+++. ..+..+++|++|++++|.+.+..+ +..+++|+.|++++|+++
T Consensus 166 -----~~~~~--~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 166 -----QVTDL--KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234 (466)
T ss_dssp -----SCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred -----cccCc--hhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcc
Confidence 22211 1245555555555555555533 235566666666666666654433 455566666666666665
Q ss_pred CccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCcccccc
Q 002155 379 GSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFS 458 (959)
Q Consensus 379 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 458 (959)
+. ..+..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|+++++++ +.
T Consensus 235 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~ 306 (466)
T 1o6v_A 235 DI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--IS 306 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GG
T ss_pred cc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hc
Confidence 32 245566666666666666664433 5566666666666666664322 5566666666666666665543 22
Q ss_pred chhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCcc
Q 002155 459 NSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLL 538 (959)
Q Consensus 459 ~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 538 (959)
.. .+|+.|++++|.+++..| +..+++|+.|++++|++++. ..+..+++|++|++++|++++..| +..+++|+
T Consensus 307 ~l--~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 378 (466)
T 1o6v_A 307 NL--KNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRIT 378 (466)
T ss_dssp GC--TTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCC
T ss_pred CC--CCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCC
Confidence 22 245555555555554444 55677777777777777643 456777777777777777776555 67777777
Q ss_pred EEecccCcCcccC
Q 002155 539 YLSLAENRLEGMV 551 (959)
Q Consensus 539 ~L~l~~N~l~~~~ 551 (959)
.|++++|++++.+
T Consensus 379 ~L~l~~n~~~~~p 391 (466)
T 1o6v_A 379 QLGLNDQAWTNAP 391 (466)
T ss_dssp EEECCCEEEECCC
T ss_pred EEeccCCcccCCc
Confidence 7777777777654
No 171
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=356.18 Aligned_cols=266 Identities=18% Similarity=0.193 Sum_probs=199.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEccccchh-----------hHHHHHHHHHHHhcCCCCceecccc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQAKTQ-----------GHREFTAEMETLGKVKHQNLVPLLG 742 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~ 742 (959)
.++|++.+.||+|+||.||+|++. ++..||||+....... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467899999999999999999975 5778999998654321 1233567888999999999999999
Q ss_pred ceec----CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC
Q 002155 743 YCSF----DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE 818 (959)
Q Consensus 743 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 818 (959)
++.. +...++||||+ +++|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccC
Confidence 9877 67889999999 999999997654 6899999999999999999999 7899999999999999887
Q ss_pred C--cEEEccccccccccccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc
Q 002155 819 F--EAKVADFGLARLISACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890 (959)
Q Consensus 819 ~--~~kl~Dfg~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 890 (959)
+ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....+.
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 9999999999876432211 1134578999999999998899999999999999999999999995422111
Q ss_pred cCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 891 EGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
............... ....... ........+.+++.+||+.||++||+++++++.|+++..
T Consensus 268 ---~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 268 ---VAVQTAKTNLLDELP-QSVLKWA---PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp ---HHHHHHHHHHHHTTT-HHHHHHS---CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred ---HHHHHHHHhhccccc-HHHHhhc---cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 111111111111100 0000000 001233468889999999999999999999999998653
No 172
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.3e-39 Score=352.08 Aligned_cols=256 Identities=25% Similarity=0.428 Sum_probs=198.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCE----EEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKT----VAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
.++|++.++||+|+||.||+|++. +++. ||+|.+... .....+.+.+|+.+++.++||||+++++++..+ ..+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-Cce
Confidence 367889999999999999999864 4443 577776543 334567789999999999999999999999765 488
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+.+|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 9999999999999998754 35889999999999999999999 88999999999999999999999999999987
Q ss_pred ccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 832 ISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 832 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
....... ......+|+.|+|||.+.+..++.++||||+||++|||++ |..||...... .+ ...+......
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~----~~~~~~~~~~ 238 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EI----SSILEKGERL 238 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GH----HHHHHTTCCC
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HH----HHHHHcCCCC
Confidence 6432221 1223456789999999998999999999999999999999 99998653222 11 2222222111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. ........+.+++.+||+.||++||+++|+++.|+++.
T Consensus 239 -----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 239 -----P----QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp -----C----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----C----CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 0 11123346788999999999999999999999999875
No 173
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-39 Score=356.14 Aligned_cols=255 Identities=25% Similarity=0.338 Sum_probs=203.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc----CCCCEEEEEEccccc----hhhHHHHHHHHHHHhcC-CCCceeccccceecCC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL----PDGKTVAVKKLSQAK----TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDE 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 748 (959)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+++++.+ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999987 368999999986532 22344567899999999 6999999999999999
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 9999999999999999998754 5889999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
++..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .... +.......
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---~~~~-~~~~~~~~ 281 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN---SQAE-ISRRILKS 281 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC---CHHH-HHHHHHHC
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc---hHHH-HHHHHhcc
Confidence 98765433444445679999999999875 347899999999999999999999996533221 1111 22222111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKFL 953 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~L 953 (959)
. +. .+......+.+++.+||+.||++|| +++|++++.
T Consensus 282 ~------~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 E------PP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp C------CC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred C------CC----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 0 11 1122334677899999999999999 999998754
No 174
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=378.59 Aligned_cols=256 Identities=30% Similarity=0.466 Sum_probs=209.0
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 757 (959)
.++|++.+.||+|+||.||+|++.++..||||+++... ...++|.+|++++++++||||+++++++.. +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 45688889999999999999999888889999987543 235678999999999999999999999876 6789999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccc
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACET 837 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 837 (959)
++|+|.++++.... ..+++.+++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 344 ~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 344 SKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp TTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred cCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 99999999976431 24788999999999999999999 88999999999999999999999999999987643222
Q ss_pred cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||..... ..+...+..+... .
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~~-----~- 484 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVERGYRM-----P- 484 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--------HHHHHHHHTTCCC-----C-
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCC-----C-
Confidence 22233456789999999888899999999999999999999 8999864321 1223333332111 1
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
....+...+.++|.+||+.||++|||+++|++.|+++.
T Consensus 485 ---~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 485 ---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11123446888999999999999999999999999874
No 175
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.6e-38 Score=347.87 Aligned_cols=261 Identities=24% Similarity=0.375 Sum_probs=197.7
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC----CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCC--
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP----DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE-- 748 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-- 748 (959)
..++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567888999999999999999754 3458999998754 3344567889999999999999999999987654
Q ss_pred ---ceEEEEEeccCCCHHHHHhhhc--CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 749 ---EKLLVYEYMVNGSLDLWLRNRT--GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 749 ---~~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
..++||||+++|+|.+++.... .....+++..++.++.|+++||+||| +.||+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 3499999999999999986432 22346899999999999999999999 899999999999999999999999
Q ss_pred cccccccccccccccc-cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHH
Q 002155 824 ADFGLARLISACETHV-STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||...... ... .
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~----~ 260 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH----EMY----D 260 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHH----H
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH----HHH----H
Confidence 9999997664322211 223456889999999998899999999999999999999 88888643221 111 1
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..... +.. .......+.+++.+||+.||++||++++++++|+++.
T Consensus 261 ~~~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 261 YLLHGHR-----LKQ----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp HHHTTCC-----CCC----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHcCCC-----CCC----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2222111 111 1123346888999999999999999999999999875
No 176
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-39 Score=355.53 Aligned_cols=265 Identities=27% Similarity=0.390 Sum_probs=189.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhc--CCCCceeccccceecCC----ceE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGK--VKHQNLVPLLGYCSFDE----EKL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~~ 751 (959)
.++|++.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 367999999999999999999874 899999998643 23456678888877 79999999999997766 789
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF-----TPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
+||||+++|+|.++++.. .+++..++.++.|++.|++|||... +.||+||||||+||+++.++.+||+||
T Consensus 78 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeec
Confidence 999999999999999764 3677889999999999999999321 479999999999999999999999999
Q ss_pred ccccccccccccc---cccccccccccCCCcCCCC------CCCCcCcchhHHHHHHHHHhC----------CCCCCCCC
Q 002155 827 GLARLISACETHV---STDIAGTFGYIPPEYGQSG------RSTTRGDVYSFGVILLELVTG----------KEPTGPEF 887 (959)
Q Consensus 827 g~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg----------~~p~~~~~ 887 (959)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| ..||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997664332221 2234689999999988766 344689999999999999999 55554332
Q ss_pred ccccCCchHHHHHHHhhcCccccccCccccC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 888 KDIEGGNLVGWVFQKMKKGQAADVLDPTVLT-ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
....... .+...+.... ..+.... ....+....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 233 ~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 233 PSDPSVE---EMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp C-CCCCC----CHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred CCCccHH---HHHHHHHHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 2111111 1111111111 1111111 1123667789999999999999999999999999999864
No 177
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.6e-38 Score=346.85 Aligned_cols=261 Identities=23% Similarity=0.298 Sum_probs=198.8
Q ss_pred cCCCCC-CeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKT-NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 755 (959)
+.|++. ++||+|+||.||+|+.. +++.||||++..........+.+|++++.++ +||||+++++++..++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 467774 78999999999999865 6899999999766555567788999999885 79999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc---EEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE---AKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~~~~~ 832 (959)
|+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++. +||+|||++...
T Consensus 92 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred cCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 999999999998754 5889999999999999999999 789999999999999988766 999999998765
Q ss_pred ccccc------cccccccccccccCCCcCCC-----CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCch------
Q 002155 833 SACET------HVSTDIAGTFGYIPPEYGQS-----GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNL------ 895 (959)
Q Consensus 833 ~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~------ 895 (959)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||............
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 32111 11123458999999998764 45789999999999999999999999764332111100
Q ss_pred -HHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 896 -VGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 896 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+...+...... .+... .......+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~i~~~~~~---~~~~~---~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 245 CQNMLFESIQEGKYE---FPDKD---WAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHCCCC---CCHHH---HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHhccCcc---cCchh---cccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11122222222110 00000 01123467899999999999999999999874
No 178
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.9e-38 Score=353.62 Aligned_cols=251 Identities=22% Similarity=0.349 Sum_probs=196.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCC--CCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVK--HQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv 753 (959)
..+|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|+.++++++ ||||+++++++..++..++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 3568899999999999999999888999999998643 3344567899999999996 59999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|| +.+++|.+++.... .+++.+++.++.||+.||+||| +.||+||||||+||+++ ++.+||+|||+++...
T Consensus 135 ~E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EE-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred Ee-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 99 56889999998754 5788899999999999999999 89999999999999995 5799999999998764
Q ss_pred ccccc-ccccccccccccCCCcCCC-----------CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 834 ACETH-VSTDIAGTFGYIPPEYGQS-----------GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 834 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+..
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~------~~~~~~ 279 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------ISKLHA 279 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH------HHHHHH
Confidence 32222 2334579999999998764 36889999999999999999999999643211 111222
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+....... .+ .. ....+.+++.+||+.||++||+++|++++
T Consensus 280 ~~~~~~~~~--~~----~~---~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 280 IIDPNHEIE--FP----DI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHCTTSCCC--CC----CC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhCccccCC--CC----cc---chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 221111100 01 11 12467889999999999999999999865
No 179
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.1e-38 Score=366.53 Aligned_cols=249 Identities=21% Similarity=0.318 Sum_probs=195.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.++||+|+||.||+|+.. +|+.||||++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999865 6899999998753 223345677899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT-PHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|||+++|+|.+++.... .+++..+..++.|++.||+||| + .||+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999997754 5889999999999999999999 6 89999999999999999999999999999764
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVL 912 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (959)
... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... . ....+......
T Consensus 300 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-------~-~~~~i~~~~~~--- 367 (446)
T 4ejn_A 300 IKD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-------K-LFELILMEEIR--- 367 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------H-HHHHHHHCCCC---
T ss_pred cCC-CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-------H-HHHHHHhCCCC---
Confidence 322 22234567999999999999999999999999999999999999999653211 1 12222211110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 002155 913 DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRP-----TMLHVLKF 952 (959)
Q Consensus 913 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~ell~~ 952 (959)
.| ......+.+++.+||+.||++|| +++|++++
T Consensus 368 ~p-------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 368 FP-------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CC-------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CC-------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 01 11234678899999999999999 99999864
No 180
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.2e-38 Score=354.42 Aligned_cols=263 Identities=28% Similarity=0.356 Sum_probs=190.4
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCC-CCceeccccceecCC--ce
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDE--EK 750 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~--~~ 750 (959)
..++|++.+.||+|+||.||+|.+. +|+.||||++... .......+.+|+.+++.+. ||||+++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999865 6899999998643 2344566778999999997 999999999987544 68
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
|+||||++ ++|.++++.. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 87 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 99999997 5899999764 4788999999999999999999 8899999999999999999999999999997
Q ss_pred ccccc--------------------cccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCcc
Q 002155 831 LISAC--------------------ETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKD 889 (959)
Q Consensus 831 ~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~ 889 (959)
..... ........+||+.|+|||++.+ ..++.++||||+||++|||++|++||......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 65321 1112234579999999998876 67899999999999999999999999653211
Q ss_pred ccCCchHHHHHHHhhcCcccccc--------------------CccccCCC-------------CHHHHHHHHHHHHHcc
Q 002155 890 IEGGNLVGWVFQKMKKGQAADVL--------------------DPTVLTAD-------------SKPMMLKMLRIAGDCL 936 (959)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~-------------~~~~~~~l~~li~~cl 936 (959)
.....+............. .+...... .......+.+++.+||
T Consensus 238 ----~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 238 ----NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313 (388)
T ss_dssp ----HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC
T ss_pred ----HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh
Confidence 1111111111100000000 00000000 0012346789999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 002155 937 SDNPAMRPTMLHVLKF 952 (959)
Q Consensus 937 ~~dP~~Rps~~ell~~ 952 (959)
+.||++|||++|++++
T Consensus 314 ~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 314 QFNPNKRISANDALKH 329 (388)
T ss_dssp CSSGGGSCCHHHHTTS
T ss_pred ccCcccCCCHHHHhCC
Confidence 9999999999999876
No 181
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.7e-39 Score=353.11 Aligned_cols=258 Identities=30% Similarity=0.480 Sum_probs=204.2
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCE--EEEEEcccc-chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKT--VAVKKLSQA-KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 753 (959)
++|++.+.||+|+||.||+|++. ++.. +|+|.+... .....+.+.+|+++++++ +||||+++++++..++..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 67888999999999999999865 4554 489988643 233455688999999999 899999999999999999999
Q ss_pred EEeccCCCHHHHHhhhc------------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcE
Q 002155 754 YEYMVNGSLDLWLRNRT------------GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEA 821 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 821 (959)
|||+++|+|.+++.... .....+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997653 22346899999999999999999999 8899999999999999999999
Q ss_pred EEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHH
Q 002155 822 KVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 900 (959)
||+|||+++..... .......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||..... ....
T Consensus 182 kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~ 251 (327)
T 1fvr_A 182 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELY 251 (327)
T ss_dssp EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHH
T ss_pred EEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--------HHHH
Confidence 99999999743321 11223356889999999888889999999999999999998 9999864321 1122
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
..+..+.. +. ........+.+++.+||+.||++|||++|++++|+++..
T Consensus 252 ~~~~~~~~-----~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 252 EKLPQGYR-----LE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp HHGGGTCC-----CC----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhhcCCC-----CC----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 23322211 11 111233468899999999999999999999999998753
No 182
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.5e-37 Score=344.99 Aligned_cols=267 Identities=27% Similarity=0.383 Sum_probs=207.9
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhc--CCCCceeccccceecCC----c
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGK--VKHQNLVPLLGYCSFDE----E 749 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~ 749 (959)
...++|++.+.||+|+||.||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++.... .
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 3467899999999999999999998 5899999998643 23456778888877 78999999999998765 7
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEeCCCCCCCEEECCCCcEEEc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF-----TPHIIHRDIKASNILLNEEFEAKVA 824 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~ 824 (959)
.++||||+++|+|.+++... .+++.+++.++.|++.|++|||... +.+|+||||||+||+++.++.+||+
T Consensus 115 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp EEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEEC
T ss_pred eEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEE
Confidence 89999999999999999764 3889999999999999999999311 3689999999999999999999999
Q ss_pred cccccccccccccc---ccccccccccccCCCcCCCCC------CCCcCcchhHHHHHHHHHhC----------CCCCCC
Q 002155 825 DFGLARLISACETH---VSTDIAGTFGYIPPEYGQSGR------STTRGDVYSFGVILLELVTG----------KEPTGP 885 (959)
Q Consensus 825 Dfg~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwslG~il~elltg----------~~p~~~ 885 (959)
|||++......... ......||+.|+|||++.+.. ++.++|||||||++|||++| ..||..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~ 269 (342)
T 1b6c_B 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269 (342)
T ss_dssp CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred ECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccc
Confidence 99999776543222 223457899999999887652 33689999999999999999 667754
Q ss_pred CCccccCCchHHHHHHHhhcCccccccCccccC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 886 EFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT-ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
..... ... ..+...+.... ..+.... ....+....+.+++.+||+.||++|||++|++++|+++..
T Consensus 270 ~~~~~--~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 270 LVPSD--PSV-EEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp TSCSS--CCH-HHHHHHHTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCcCc--ccH-HHHHHHHHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 32221 111 11222222111 1111111 1134567789999999999999999999999999999864
No 183
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.1e-38 Score=343.02 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=202.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 467889999999999999999875 6899999999765544456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE---CCCCcEEEcccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLIS 833 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~~ 833 (959)
+++++|.+++.... .+++..++.++.|++.|++||| +.|++||||||+||++ +.++.+||+|||.+....
T Consensus 88 ~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 88 VSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred CCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 99999999997654 5789999999999999999999 8899999999999999 778999999999987543
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. .......|++.|+|||++.+..++.++||||+|+++|||++|..||...... .....+..+... ..
T Consensus 161 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~~--~~ 227 (304)
T 2jam_A 161 N---GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--------KLFEKIKEGYYE--FE 227 (304)
T ss_dssp C---BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHCCCC--CC
T ss_pred C---CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCC--CC
Confidence 2 1223346899999999999999999999999999999999999998653211 122222222111 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .........+.+++.+||+.||++||+++|++++
T Consensus 228 ~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 228 S----PFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp T----TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred c----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 1112234568889999999999999999999874
No 184
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1e-38 Score=343.08 Aligned_cols=251 Identities=30% Similarity=0.463 Sum_probs=198.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecC-CceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-EEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~ 756 (959)
.++|++.+.||+|+||.||+|++. |+.||||++.... ..+.+.+|++++++++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 367888999999999999999884 8899999987543 346788999999999999999999986544 578999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
+++++|.+++.... ...+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+......
T Consensus 97 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 170 (278)
T ss_dssp CTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred CCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc-
Confidence 99999999997653 124788999999999999999999 889999999999999999999999999999765422
Q ss_pred ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 837 THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.....+++.|+|||.+.+..++.++||||+|+++|||++ |..||...... . +...+..+.. +.
T Consensus 171 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~----~~~~~~~~~~-----~~ 234 (278)
T 1byg_A 171 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----D----VVPRVEKGYK-----MD 234 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG----G----HHHHHTTTCC-----CC
T ss_pred ---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----H----HHHHHhcCCC-----CC
Confidence 122357889999999988889999999999999999998 99998643211 1 1222222211 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .......+.+++.+||+.||++||++.|+++.|++++
T Consensus 235 ~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 235 A----PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C----cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 1 1123346888999999999999999999999999985
No 185
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=348.96 Aligned_cols=262 Identities=25% Similarity=0.338 Sum_probs=198.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57889999999999999999975 58999999886543 2334567899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|++++++.+++.... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 83 ~~~~~~l~~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRYQR----GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhhhc----CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999999887543 4889999999999999999999 889999999999999999999999999999876432
Q ss_pred cccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh----------
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK---------- 904 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---------- 904 (959)
.. ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... +....+.....
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 230 (311)
T 4agu_A 156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV----DQLYLIRKTLGDLIPRHQQVF 230 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCCHHHHHHH
T ss_pred cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhccccccccccc
Confidence 22 2234578999999998765 56899999999999999999999999653221 11111111110
Q ss_pred -cCcc-c--cccCccccCC---CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 -KGQA-A--DVLDPTVLTA---DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 -~~~~-~--~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... . ...++..... ........+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 0 0001100000 001234457889999999999999999999864
No 186
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-38 Score=343.29 Aligned_cols=256 Identities=29% Similarity=0.403 Sum_probs=202.2
Q ss_pred CCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCce-EEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK-LLV 753 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~lv 753 (959)
.|+..++||+|+||.||+|++.+ +..||+|++.... ....+.+.+|+.+++.++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45567899999999999998532 2379999987543 34456788999999999999999999999766655 999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+.+|+|.+++.... ..+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.++...
T Consensus 102 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ---RNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 99999999999997643 35788999999999999999999 7899999999999999999999999999997654
Q ss_pred ccc---ccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 834 ACE---THVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 834 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
... ........+++.|+|||.+.+..++.++||||+|+++|||++|+.|+...... ... ...+.......
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~---~~~----~~~~~~~~~~~ 248 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP---FDL----THFLAQGRRLP 248 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG---GGH----HHHHHTTCCCC
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH---HHH----HHHhhcCCCCC
Confidence 322 11223346788999999999999999999999999999999966665432221 111 12222211100
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
........+.+++.+||+.||++|||++++++.|+++.
T Consensus 249 ---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 249 ---------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp ---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 01112346788999999999999999999999999874
No 187
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.6e-38 Score=349.53 Aligned_cols=261 Identities=28% Similarity=0.439 Sum_probs=209.1
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 749 (959)
..++|++.+.||+|+||.||+|++. +++.||||++.... ......+.+|+.+++.++||||+++++++..++.
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 102 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 102 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence 4567899999999999999999764 36789999987543 3344568899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcC------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTG------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
.++||||+++|+|.++++.... ....+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||
T Consensus 103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEEE
Confidence 9999999999999999976431 1234688999999999999999999 789999999999999999999999
Q ss_pred ccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHH
Q 002155 824 ADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
+|||+++........ ......+|+.|+|||++.+..++.++||||+|+++|||++ |..||..... .....
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~ 251 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--------EQVLR 251 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--------HHHHH
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--------HHHHH
Confidence 999999765432221 1223456889999999988889999999999999999999 8888854311 11222
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+....... ........+.+++.+||+.||++|||+.|++++|+++.
T Consensus 252 ~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 252 FVMEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred HHHcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 222221111 11123346788999999999999999999999998863
No 188
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.9e-38 Score=361.81 Aligned_cols=259 Identities=25% Similarity=0.284 Sum_probs=193.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC------C
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------E 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 748 (959)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467999999999999999999865 6889999998754 334456788999999999999999999998654 3
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 56999999976 46666642 3788999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH------
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK------ 902 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~------ 902 (959)
++.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... +....+.+.
T Consensus 211 a~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~----~~~~~i~~~lg~p~~ 284 (464)
T 3ttj_A 211 ARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI----DQWNKVIEQLGTPCP 284 (464)
T ss_dssp C-------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCSCCH
T ss_pred eeecCC--CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCCH
Confidence 987643 22334568999999999999999999999999999999999999999653211 011111110
Q ss_pred -------------hhcCcccc------ccCccccCCC---CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 -------------MKKGQAAD------VLDPTVLTAD---SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 -------------~~~~~~~~------~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........ .+.....+.. .......+.+++.+||+.||++|||++|++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 10000000 0000000111 11225578899999999999999999999875
No 189
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4e-38 Score=348.54 Aligned_cols=247 Identities=30% Similarity=0.427 Sum_probs=199.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.+.|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35588899999999999999986 478999999986432 23345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+. |++.+++.... ..+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 133 ~e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred EecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 99997 58888886544 35889999999999999999999 7899999999999999999999999999997654
Q ss_pred cccccccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
. .....||+.|+|||++. ...++.++|||||||++|||++|+.||.... ............
T Consensus 206 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-------~~~~~~~~~~~~---- 269 (348)
T 1u5q_A 206 P-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-------AMSALYHIAQNE---- 269 (348)
T ss_dssp S-----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-------HHHHHHHHHHSC----
T ss_pred C-----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHhcC----
Confidence 2 23457899999999873 5678999999999999999999999985431 112222222111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+.... ......+.+++.+||+.||++|||+++++++
T Consensus 270 --~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 270 --SPALQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp --CCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred --CCCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111111 1123457789999999999999999999865
No 190
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.2e-38 Score=347.50 Aligned_cols=262 Identities=29% Similarity=0.442 Sum_probs=209.1
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEc------CCCCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAAL------PDGKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDE 748 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 748 (959)
..++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 457899999999999999999974 356889999987543 33456788999999999 7999999999987654
Q ss_pred -ceEEEEEeccCCCHHHHHhhhcCC------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE
Q 002155 749 -EKLLVYEYMVNGSLDLWLRNRTGS------------LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL 815 (959)
Q Consensus 749 -~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 815 (959)
..++||||+++|+|.+++...... ...+++..++.++.|++.|++||| +.||+||||||+||++
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~ 181 (316)
T 2xir_A 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILL 181 (316)
T ss_dssp SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEE
Confidence 589999999999999999875432 122789999999999999999999 8899999999999999
Q ss_pred CCCCcEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCC
Q 002155 816 NEEFEAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGG 893 (959)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 893 (959)
+.++.+||+|||.++........ ......+|+.|+|||++.+..++.++||||+|+++|||++ |..||......
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---- 257 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID---- 257 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS----
T ss_pred CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh----
Confidence 99999999999999866432221 2234467889999999988899999999999999999998 99998653221
Q ss_pred chHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 894 NLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
..+...+..+.... . .......+.+++.+||+.||++|||++|++++|+++.
T Consensus 258 ---~~~~~~~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 258 ---EEFCRRLKEGTRMR-----A----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp ---HHHHHHHHHTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHHhccCccCC-----C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11222222221111 0 1112346788999999999999999999999999874
No 191
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.1e-38 Score=338.85 Aligned_cols=249 Identities=28% Similarity=0.429 Sum_probs=204.0
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec---------
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF--------- 746 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------- 746 (959)
..++|++.+.||+|+||.||+|++. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3467899999999999999999976 78999999987543 246689999999999999999998753
Q ss_pred -------CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC
Q 002155 747 -------DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF 819 (959)
Q Consensus 747 -------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 819 (959)
....++||||+++++|.+++.... ...+++..++.++.|++.|++||| +.||+||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCC
Confidence 345799999999999999997653 235889999999999999999999 78999999999999999999
Q ss_pred cEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHH
Q 002155 820 EAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWV 899 (959)
Q Consensus 820 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 899 (959)
.+||+|||.+....... ......|++.|+|||.+.+..++.++||||+|+++|||++|..|+... ...
T Consensus 160 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~~ 227 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKF 227 (284)
T ss_dssp EEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HHH
T ss_pred CEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HHH
Confidence 99999999998765322 223456899999999998889999999999999999999999886321 111
Q ss_pred HHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.......... . .....+.+++.+||+.||++||++.|++++|+.++.
T Consensus 228 ~~~~~~~~~~--------~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 228 FTDLRDGIIS--------D----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp HHHHHTTCCC--------T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred HHHhhccccc--------c----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 2222221111 1 122357789999999999999999999999998753
No 192
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.3e-39 Score=346.27 Aligned_cols=257 Identities=22% Similarity=0.313 Sum_probs=204.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceecccccee--cCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCS--FDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+.++++++||||+++++++. .+...++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467889999999999999999875 6899999998643 2344567889999999999999999999874 4567899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEeCCCCCCCEEECCCCcEEEcccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH-----IIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
||||+++++|.+++.........+++..++.++.|++.|++||| +.+ ++||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999999876544456899999999999999999999 667 9999999999999999999999999
Q ss_pred cccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
.++...... .......|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ..+...+..+.
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i~~~~ 232 (279)
T 2w5a_A 162 LARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--------KELAGKIREGK 232 (279)
T ss_dssp HHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTC
T ss_pred hheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--------HHHHHHHhhcc
Confidence 997654321 112234689999999999888899999999999999999999999865321 11222232222
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKE 955 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 955 (959)
... . .......+.+++.+||+.||++||+++|+++++..
T Consensus 233 ~~~-----~----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 233 FRR-----I----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp CCC-----C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ccc-----C----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 111 1 11233468889999999999999999999987653
No 193
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1e-37 Score=336.36 Aligned_cols=255 Identities=24% Similarity=0.346 Sum_probs=203.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch------hhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT------QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.++++++||||+++++++..++..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 57889999999999999999976 689999999865321 13567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC----cEEEcccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF----EAKVADFG 827 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 827 (959)
+||||+++++|.+++.... .+++.+++.++.|++.||+||| +.|++||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE----SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 9999999999999997653 5889999999999999999999 88999999999999998877 89999999
Q ss_pred cccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 828 LARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
.+....... ......|++.|+|||++.+..++.++||||+|+++|||++|..||...... . ....+....
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~-~~~~~~~~~ 227 (283)
T 3bhy_A 158 IAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-------E-TLTNISAVN 227 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHTTC
T ss_pred cceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-------H-HHHHhHhcc
Confidence 998664322 223456899999999999889999999999999999999999998653211 1 111121111
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhh
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF--LKEI 956 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~--L~~l 956 (959)
. ...+.... .....+.+++.+||+.||++||++.|++++ ++++
T Consensus 228 ~--~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 228 Y--DFDEEYFS----NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp C--CCCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred c--CCcchhcc----cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 0 00111111 123457889999999999999999999973 4444
No 194
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.9e-38 Score=347.89 Aligned_cols=263 Identities=22% Similarity=0.290 Sum_probs=193.3
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
..++|++.+.||+|+||.||+|++. +++.||||++..... .....+.+|+.++++++||||+++++++..++..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3568999999999999999999865 689999999865432 2245577899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE-----CCCCcEEEccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL-----NEEFEAKVADFGL 828 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill-----~~~~~~kl~Dfg~ 828 (959)
|||+++ +|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||+
T Consensus 112 ~e~~~~-~L~~~~~~~~----~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKNP----DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCSE-EHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCCC-CHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999985 9999998754 4889999999999999999999 8899999999999999 4556699999999
Q ss_pred ccccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+........
T Consensus 184 a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~~ 258 (329)
T 3gbz_A 184 ARAFGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI----DQLFKIFEVLGLPD 258 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCC
T ss_pred ccccCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH----HHHHHHHHHhCCCc
Confidence 98764322 222345689999999988764 4899999999999999999999998653221 11111111111110
Q ss_pred ccccc-----------CccccCCCCH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AADVL-----------DPTVLTADSK-----PMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~~~~-----------~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+. .+........ .....+.+++.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 00000 0000000001 123567899999999999999999999873
No 195
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.2e-38 Score=338.90 Aligned_cols=253 Identities=24% Similarity=0.339 Sum_probs=203.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467899999999999999999875 68999999986443 3345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... .+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+|||.+......
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 999999999886542 5889999999999999999999 889999999999999999999999999999765432
Q ss_pred cc-cccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 836 ET-HVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 836 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. .......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||....... .. ......... ...
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~-----~~~~~~~~~--~~~ 229 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QE-----YSDWKEKKT--YLN 229 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS--HH-----HHHHHTTCT--TST
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH--HH-----HHHhhhccc--ccC
Confidence 21 22334578999999999887765 778999999999999999999996533221 01 111111110 000
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+.+++.+||+.||++|||++|++++
T Consensus 230 ------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 ------PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 011233467889999999999999999999864
No 196
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-38 Score=348.87 Aligned_cols=264 Identities=25% Similarity=0.328 Sum_probs=197.4
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh-----hHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ-----GHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
..++|++.+.||+|+||.||+|++. +|+.||||++...... ..+.+.+|+++++.++||||+++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4578999999999999999999976 5899999998643221 124577899999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++ ++.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999986 8988887643 35778899999999999999999 8899999999999999999999999999998
Q ss_pred ccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
...... .......||+.|+|||++.+. .++.++||||+||++|||++|.+||...... .....+..........
T Consensus 161 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~----~~~~~i~~~~~~~~~~ 235 (346)
T 1ua2_A 161 SFGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL----DQLTRIFETLGTPTEE 235 (346)
T ss_dssp TTTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCCTT
T ss_pred eccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH----HHHHHHHHHcCCCChh
Confidence 764322 223345789999999988654 5789999999999999999999998653211 1111222221111111
Q ss_pred cccCc---------cccCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 910 DVLDP---------TVLTADS-----KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 910 ~~~~~---------~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+.+. ...+..+ ......+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 11000 0000001 1233568899999999999999999999875
No 197
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.1e-38 Score=352.85 Aligned_cols=199 Identities=26% Similarity=0.324 Sum_probs=174.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-----CCceeccccceecCCce
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-----HQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~~~~~~~~ 750 (959)
..++|++.++||+|+||.||+|++. +++.||||++... ......+..|+.+++.++ ||||+++++++...+..
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~ 111 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM 111 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence 4578999999999999999999874 6889999998743 233456778999999986 99999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-------------
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE------------- 817 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~------------- 817 (959)
++||||+ +++|.+++..... ..+++.++..++.|++.||+||| +.||+||||||+||+++.
T Consensus 112 ~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~ 185 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRV 185 (360)
T ss_dssp EEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred EEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhcc
Confidence 9999999 8999999987542 34889999999999999999999 889999999999999975
Q ss_pred ------------CCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCC
Q 002155 818 ------------EFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGP 885 (959)
Q Consensus 818 ------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~ 885 (959)
++.+||+|||+++.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 186 TDGKKIQIYRTKSTGIKLIDFGCATFKSD----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp TTCCEEEEEEESCCCEEECCCTTCEETTS----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccCCCCEEEEeccCceecCC----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 78999999999976432 22345789999999999999999999999999999999999999965
Q ss_pred C
Q 002155 886 E 886 (959)
Q Consensus 886 ~ 886 (959)
.
T Consensus 262 ~ 262 (360)
T 3llt_A 262 H 262 (360)
T ss_dssp S
T ss_pred C
Confidence 3
No 198
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=353.07 Aligned_cols=262 Identities=24% Similarity=0.349 Sum_probs=194.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhh-HHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEe
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQG-HREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
++|++.+.||+|+||.||+|++. +++.||||++....... ...+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999976 68999999986543221 12345799999999999999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACE 836 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 836 (959)
++ |+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG---NIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 97 49999887654 35889999999999999999999 8899999999999999999999999999997654322
Q ss_pred ccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC--
Q 002155 837 THVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD-- 913 (959)
Q Consensus 837 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 913 (959)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....+...........+..
T Consensus 155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~ 229 (324)
T 3mtl_A 155 -KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE----EQLHFIFRILGTPTEETWPGIL 229 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTGG
T ss_pred -cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCChHhchhhh
Confidence 22234468999999998776 56899999999999999999999999653221 12222222211111100000
Q ss_pred ----------ccccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 ----------PTVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ----------~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+..... ........+.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000 011223467899999999999999999999873
No 199
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.5e-38 Score=344.10 Aligned_cols=255 Identities=25% Similarity=0.356 Sum_probs=203.4
Q ss_pred hcCCCCCC-eeccCCCeEEEEEEc---CCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceE
Q 002155 678 TNNFCKTN-IIGDGGFGTVYKAAL---PDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 678 ~~~f~~~~-~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 751 (959)
.++|++.+ .||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35677777 999999999999954 246889999987543 23356788999999999999999999998 567789
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+++++|.+++.... .+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||++..
T Consensus 94 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCCHHHHHHhCc----CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 9999999999999998743 4889999999999999999999 88999999999999999999999999999987
Q ss_pred ccccccccc--ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 832 ISACETHVS--TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 832 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
......... ....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... .+...+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~ 238 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAMLEKGER 238 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCC
Confidence 644322211 22346789999999888888999999999999999999 99998653211 12222222211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .. +......+.+++.+||+.||++||++.++++.|+++.
T Consensus 239 ~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 239 M-----GC----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp C-----CC----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred C-----CC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 11 1123346888999999999999999999999999874
No 200
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.6e-39 Score=353.80 Aligned_cols=261 Identities=28% Similarity=0.444 Sum_probs=208.2
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC------CCEEEEEEccccc-hhhHHHHHHHHHHHhcC-CCCceeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD------GKTVAVKKLSQAK-TQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++.. +..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++..++.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 4678889999999999999998642 2479999987543 33456788999999999 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcC----------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTG----------SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF 819 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 819 (959)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+||| +.||+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCC
Confidence 9999999999999999976431 1235789999999999999999999 78999999999999999999
Q ss_pred cEEEccccccccccccccc-ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHH
Q 002155 820 EAKVADFGLARLISACETH-VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVG 897 (959)
Q Consensus 820 ~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 897 (959)
.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |..||...... .
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-------~ 274 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-------S 274 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-------H
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-------H
Confidence 9999999999865433222 2233457889999999888889999999999999999999 88998653221 1
Q ss_pred HHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 898 WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+.......... ..+ ......+.+++.+||+.||++|||++|+++.|+++.
T Consensus 275 ~~~~~~~~~~~~--~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 275 KFYKLVKDGYQM--AQP-------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HHHHHHHHTCCC--CCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCC--CCC-------CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 112222221110 011 112346788999999999999999999999999875
No 201
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=7.7e-38 Score=349.61 Aligned_cols=256 Identities=26% Similarity=0.392 Sum_probs=202.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 367889999999999999999876 6899999998754 33445678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
|+++++|.+++.... .+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|||++.....
T Consensus 112 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred CCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 999999999998754 4888999999999999999999 54 899999999999999999999999999976532
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC----------------------
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG---------------------- 892 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~---------------------- 892 (959)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||.........
T Consensus 185 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 185 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp H---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred c---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 1 223457899999999999999999999999999999999999999653221000
Q ss_pred -------------CchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 893 -------------GNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 893 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...... ...+.... .+. .........+.+++.+||+.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFEL-LDYIVNEP-----PPK---LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ------------CCCHHHH-HHHHHHSC-----CCC---CCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CcccccccCCCCcccchhh-hhHHhccC-----CCC---CCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000000 00000000 000 0011133468899999999999999999999874
No 202
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.8e-38 Score=358.13 Aligned_cols=253 Identities=25% Similarity=0.330 Sum_probs=191.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--------hhHHHHHHHHHHHhcCCCCceeccccceecC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--------QGHREFTAEMETLGKVKHQNLVPLLGYCSFD 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 747 (959)
..++|.+.+.||+|+||.||+|.+. +++.||||++..... .....+.+|+.++++++||||+++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 4678999999999999999999865 689999999864321 11224788999999999999999999975 4
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC---cEEEc
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF---EAKVA 824 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~ 824 (959)
+..++||||+++|+|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++ .+||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred CceEEEEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEe
Confidence 56899999999999999886543 5899999999999999999999 78999999999999997544 59999
Q ss_pred ccccccccccccccccccccccccccCCCcCCC---CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH
Q 002155 825 DFGLARLISACETHVSTDIAGTFGYIPPEYGQS---GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ 901 (959)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (959)
|||+++.... ........||+.|+|||++.+ ..++.++||||+||++|||++|..||...... ..+ ..
T Consensus 285 DFG~a~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~---~~~----~~ 355 (419)
T 3i6u_A 285 DFGHSKILGE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ---VSL----KD 355 (419)
T ss_dssp CSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS---CCH----HH
T ss_pred ecccceecCC--CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch---HHH----HH
Confidence 9999987643 222344679999999998753 56788999999999999999999999653222 111 12
Q ss_pred HhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 902 KMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.+..+.... .+... ......+.+++.+||+.||++||+++|++++
T Consensus 356 ~i~~~~~~~--~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 356 QITSGKYNF--IPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHTTCCCC--CHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhcCCCCC--Cchhh----cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 222221110 01111 1123467889999999999999999999874
No 203
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=376.52 Aligned_cols=248 Identities=23% Similarity=0.389 Sum_probs=198.7
Q ss_pred eeccCCCeEEEEEEcC---CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccCCC
Q 002155 686 IIGDGGFGTVYKAALP---DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVNGS 761 (959)
Q Consensus 686 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 761 (959)
.||+|+||.||+|.++ ++..||||+++... ....+++.+|++++++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999764 46679999997643 3456789999999999999999999999875 56999999999999
Q ss_pred HHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccc-
Q 002155 762 LDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVS- 840 (959)
Q Consensus 762 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~- 840 (959)
|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++..........
T Consensus 422 L~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 999997543 35899999999999999999999 88999999999999999999999999999987643222211
Q ss_pred -ccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccC
Q 002155 841 -TDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLT 918 (959)
Q Consensus 841 -~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (959)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... + +...+..+....
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----~----~~~~i~~~~~~~-------- 559 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----E----VMAFIEQGKRME-------- 559 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH----H----HHHHHHTTCCCC--------
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH----H----HHHHHHcCCCCC--------
Confidence 12245689999999988899999999999999999998 99998653221 1 223333322111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 919 ADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 919 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.+..+...+.+++.+||+.||++||++.++++.|+++.
T Consensus 560 -~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 560 -CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp -CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 11223457889999999999999999999999999874
No 204
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.5e-37 Score=336.98 Aligned_cols=249 Identities=24% Similarity=0.377 Sum_probs=204.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467889999999999999999976 57899999986542 33456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... .+++.+++.++.|+++|++||| +.|++||||||+||+++.++.+||+|||.+....
T Consensus 94 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999987654 5889999999999999999999 8899999999999999999999999999998654
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... . ....+..... ..
T Consensus 167 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~---~~ 234 (294)
T 2rku_A 167 YDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------E-TYLRIKKNEY---SI 234 (294)
T ss_dssp STT-CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHTTCC---CC
T ss_pred cCc-cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHhhccC---CC
Confidence 322 2223456899999999999888999999999999999999999998653211 1 1112221111 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ ......+.+++.+||+.||++|||++|++++
T Consensus 235 ~-------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 P-------KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred c-------cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1 1123467789999999999999999999874
No 205
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.7e-37 Score=334.20 Aligned_cols=248 Identities=27% Similarity=0.395 Sum_probs=197.3
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceec----CCceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF----DEEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~ 751 (959)
..|++.+.||+|+||.||+|.+. ++..||+|++... .....+.+.+|+.++++++||||+++++++.. +...+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34677889999999999999875 6789999998643 34445678899999999999999999998754 35579
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEEC-CCCcEEEccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLN-EEFEAKVADFGL 828 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfg~ 828 (959)
+||||+++++|.+++.... .+++..++.++.|++.|++||| +.+ |+||||||+||+++ .++.+||+|||+
T Consensus 106 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEecCCCCHHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999998754 5788999999999999999999 777 99999999999997 789999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
+..... .......||+.|+|||++. +.++.++||||+|+++|+|++|+.||...... ......+.....
T Consensus 179 ~~~~~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~ 247 (290)
T 1t4h_A 179 ATLKRA---SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRRVTSGVK 247 (290)
T ss_dssp GGGCCT---TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHHHTTTCC
T ss_pred cccccc---cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-------HHHHHHHhccCC
Confidence 975432 2223456899999999876 45899999999999999999999998643221 112222222211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... ... .....+.+++.+||+.||++|||++|++++
T Consensus 248 ~~~-----~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 248 PAS-----FDK---VAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp CGG-----GGG---CCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccc-----cCC---CCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111 111 112357889999999999999999999874
No 206
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=351.86 Aligned_cols=262 Identities=17% Similarity=0.228 Sum_probs=201.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC---------CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceec---------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD---------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVP--------- 739 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~--------- 739 (959)
.++|++.+.||+|+||.||+|++.. ++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 4678999999999999999998763 789999998643 35778999999999999998
Q ss_pred ------cccceec-CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCC
Q 002155 740 ------LLGYCSF-DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASN 812 (959)
Q Consensus 740 ------~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 812 (959)
+++++.. +...++||||+ +++|.+++.... ...+++.+++.++.|++.||+||| +.||+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGG
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHH
Confidence 4455544 67789999999 999999998652 235899999999999999999999 7899999999999
Q ss_pred EEECCCC--cEEEccccccccccccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 002155 813 ILLNEEF--EAKVADFGLARLISACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTG 884 (959)
Q Consensus 813 ill~~~~--~~kl~Dfg~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~ 884 (959)
|+++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 9999999999876532221 1133478999999999999899999999999999999999999986
Q ss_pred CCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 885 PEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
...... ..+.. ......... .....+.. ........+.+++.+||+.||++||+++++++.|+++.
T Consensus 270 ~~~~~~--~~~~~-~~~~~~~~~-~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 270 NCLPNT--EDIMK-QKQKFVDKP-GPFVGPCG---HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp GGTTCH--HHHHH-HHHHHHHSC-CCEECTTS---CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred cCCcCH--HHHHH-HHHhccCCh-hhhhhhcc---ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 532111 11111 111111111 11111000 00112346888999999999999999999999999874
No 207
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.9e-38 Score=341.07 Aligned_cols=254 Identities=24% Similarity=0.380 Sum_probs=199.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
..++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3467889999999999999999976 588999999877666667789999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ..+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 97 FCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp CCTTEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred eCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 999999999987644 34889999999999999999999 789999999999999999999999999997643211
Q ss_pred cccccccccccccccCCCcC-----CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 836 ETHVSTDIAGTFGYIPPEYG-----QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
........|++.|+|||++ .+..++.++||||+|+++|||++|..||..... ...... ........
T Consensus 171 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~-~~~~~~~~ 241 (302)
T 2j7t_A 171 -LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLLK-IAKSDPPT 241 (302)
T ss_dssp -HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHH-HHHSCCCC
T ss_pred -ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-------HHHHHH-HhccCCcc
Confidence 1112334689999999987 467789999999999999999999999864321 111111 11111111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ........+.+++.+||+.||++|||+++++++
T Consensus 242 ~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 242 LL-------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp CS-------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred cC-------CccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11 112233468889999999999999999999863
No 208
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=346.60 Aligned_cols=252 Identities=16% Similarity=0.137 Sum_probs=201.0
Q ss_pred HhcCCCCCCeeccCCCeEEEEEE------cCCCCEEEEEEccccchhhHHHHHHHHHHHhcCC---CCceeccccceecC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAA------LPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK---HQNLVPLLGYCSFD 747 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~ 747 (959)
..++|++.++||+|+||.||+|. ..+++.||||++.... ..++..|+++++.++ |+||+++++++..+
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 35678899999999999999994 3468899999997543 345667777777776 99999999999999
Q ss_pred CceEEEEEeccCCCHHHHHhhhcC-CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---------
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTG-SLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE--------- 817 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--------- 817 (959)
+..++||||+++|+|.+++..... ....+++..++.++.|++.||+||| +.||+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999976432 2346899999999999999999999 899999999999999998
Q ss_pred --CCcEEEcccccccccccc-cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCc
Q 002155 818 --EFEAKVADFGLARLISAC-ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGN 894 (959)
Q Consensus 818 --~~~~kl~Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~ 894 (959)
++.+||+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--- 293 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC--- 293 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE---
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce---
Confidence 899999999999765321 22233456799999999999999999999999999999999999999854221100
Q ss_pred hHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHhh
Q 002155 895 LVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMR-PTMLHVLKFLKEI 956 (959)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-ps~~ell~~L~~l 956 (959)
........... ...+.+++..|++.+|.+| |+++++.+.|+++
T Consensus 294 ----------------~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 294 ----------------KPEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp ----------------EECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ----------------eechhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 00000011111 2345677888999999998 6788888888775
No 209
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.4e-37 Score=335.37 Aligned_cols=247 Identities=22% Similarity=0.338 Sum_probs=203.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++..++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367889999999999999999875 57889999986532 22346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++|+|.+++.... .+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+....
T Consensus 93 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp ECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 99999999999998754 4889999999999999999999 8999999999999999999999999999987653
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
.. ......|++.|+|||++.+..++.++||||+|+++|||++|..||...... . ....+.....
T Consensus 166 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~-~~~~~~~~~~----- 229 (284)
T 2vgo_A 166 SL---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-------E-THRRIVNVDL----- 229 (284)
T ss_dssp SS---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHTTCC-----
T ss_pred cc---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-------H-HHHHHhcccc-----
Confidence 21 223457899999999999999999999999999999999999998653211 1 1122221111
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. +......+.+++.+||+.||++||+++|++++
T Consensus 230 -~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 230 -KF----PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp -CC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred -CC----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 01 11123467889999999999999999999863
No 210
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.9e-38 Score=347.99 Aligned_cols=261 Identities=28% Similarity=0.395 Sum_probs=204.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC------CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP------DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +++.||||++... ......++.+|+.++++++||||+++++++..++..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 467889999999999999999842 4778999998643 334456788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCC---ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGS---LEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVA 824 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~ 824 (959)
++||||+++++|.+++...... ...+++.+++.++.|++.||+||| +.||+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999875422 235889999999999999999999 889999999999999984 4569999
Q ss_pred ccccccccccccc-cccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHH
Q 002155 825 DFGLARLISACET-HVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 825 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|||.+........ .......+++.|+|||.+.+..++.++||||||+++|||++ |..||..... ..+...
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~~~ 257 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVLEF 257 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--------HHHHHH
Confidence 9999976543221 11223457889999999888889999999999999999998 8899864321 112222
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+...... .. ...+...+.+++.+||+.||++||++.+++++|+.+..
T Consensus 258 ~~~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 258 VTSGGRM-----DP----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp HHTTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcCCCC-----CC----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 2222111 11 11223467889999999999999999999999998753
No 211
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.1e-39 Score=360.37 Aligned_cols=243 Identities=15% Similarity=0.180 Sum_probs=187.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHH---HHHhcCCCCceeccc-------cc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEM---ETLGKVKHQNLVPLL-------GY 743 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~ 743 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 467888999999999999999974 6899999998742 334457788999 555566899999998 44
Q ss_pred eecCC-----------------ceEEEEEeccCCCHHHHHhhhcC---CccccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002155 744 CSFDE-----------------EKLLVYEYMVNGSLDLWLRNRTG---SLEVLGWDKRYKIACGAARGLAFLHHGFTPHI 803 (959)
Q Consensus 744 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 803 (959)
+..++ ..++||||+ +|+|.+++..... ....+++..++.++.||+.||+||| +.||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 44332 278999999 6799999986431 1123456888899999999999999 8899
Q ss_pred EeCCCCCCCEEECCCCcEEEcccccccccccccccccccccccccccCCCcCCCC-----------CCCCcCcchhHHHH
Q 002155 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG-----------RSTTRGDVYSFGVI 872 (959)
Q Consensus 804 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslG~i 872 (959)
+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 2234567 999999998877 79999999999999
Q ss_pred HHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 873 LLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 873 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
+|||++|+.||........ ... +... . ......+.+++.+||+.||++||++.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~~----~~~----~~~~----------~----~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG----SEW----IFRS----------C----KNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CC----SGG----GGSS----------C----CCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccc----hhh----hhhh----------c----cCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999864322110 000 0000 0 112346788999999999999999999986
No 212
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.1e-37 Score=362.14 Aligned_cols=251 Identities=25% Similarity=0.349 Sum_probs=202.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.++||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++......++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999875 68999999986432 334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC---CCCcEEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN---EEFEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~~ 831 (959)
||+++|+|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 9999999999987754 5889999999999999999999 88999999999999995 456899999999986
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... .......||+.|+|||++.+ .++.++||||+||++|+|++|.+||...... .+...+..+.....
T Consensus 174 ~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~ 242 (486)
T 3mwu_A 174 FQQN--TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGKYAFD 242 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCSC
T ss_pred CCCC--CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCC
Confidence 6432 22344579999999999875 5899999999999999999999999653211 12222222211110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. +........+.+++.+||+.||++|||+.|++++
T Consensus 243 --~----~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 --L----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp --S----GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred --C----cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0112233467899999999999999999999975
No 213
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.3e-37 Score=355.49 Aligned_cols=199 Identities=29% Similarity=0.382 Sum_probs=166.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC-----Cc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 749 (959)
.++|++.++||+|+||.||+|++. +++.||||++... .....+.+.+|+.+++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 467999999999999999999875 5889999998653 333456788999999999999999999998765 56
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||++ |+|.++++... .+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI----FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999996 59999997643 5899999999999999999999 889999999999999999999999999999
Q ss_pred cccccccc---------------------cccccccccccccCCCcC-CCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 002155 830 RLISACET---------------------HVSTDIAGTFGYIPPEYG-QSGRSTTRGDVYSFGVILLELVTGKEPTG 884 (959)
Q Consensus 830 ~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg~~p~~ 884 (959)
+....... ......+||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 87643221 122456799999999975 56679999999999999999998665553
No 214
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-37 Score=362.92 Aligned_cols=251 Identities=24% Similarity=0.337 Sum_probs=199.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|+++ ++..||+|++.... ......+.+|+.+++.++||||++++++|......++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999976 68899999987543 334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC---CcEEEcccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE---FEAKVADFGLARL 831 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~ 831 (959)
||+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.. +.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999887654 5889999999999999999999 8899999999999999764 5599999999987
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... .......||+.|+|||++. ..++.++||||+||++|+|++|.+||...... .+...+..+....
T Consensus 189 ~~~~--~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~- 256 (494)
T 3lij_A 189 FENQ--KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--------EILRKVEKGKYTF- 256 (494)
T ss_dssp CBTT--BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCC-
T ss_pred CCCC--ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCC-
Confidence 6532 2234457999999999876 56999999999999999999999999653221 1222332221110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... .......+.+++.+||+.||++|||++|++++
T Consensus 257 -~~~~----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 257 -DSPE----WKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp -CSGG----GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -Cchh----cccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1111 11233467889999999999999999999864
No 215
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=347.17 Aligned_cols=258 Identities=26% Similarity=0.324 Sum_probs=193.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCC------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE------ 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 748 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467889999999999999999874 6899999998543 2333566889999999999999999999987653
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..|+||||+ +++|.++++.. .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeec
Confidence 459999999 78999999763 4788999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....+........
T Consensus 175 a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~l~~i~~~~g~~~ 246 (367)
T 1cm8_A 175 ARQADS----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL----DQLKEIMKVTGTPP 246 (367)
T ss_dssp CEECCS----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCC
T ss_pred cccccc----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCC
Confidence 986542 2334578999999998776 67899999999999999999999999653211 11111111000000
Q ss_pred c-----------------ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 A-----------------ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~-----------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .....+.............+.+++.+|+..||++|||++|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 247 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0 00000000001111233467889999999999999999999884
No 216
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.5e-37 Score=343.22 Aligned_cols=249 Identities=25% Similarity=0.389 Sum_probs=204.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|.+.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467889999999999999999976 5789999998654 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 120 ~e~~~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999987654 5889999999999999999999 7899999999999999999999999999998764
Q ss_pred cccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... . ....+...... .
T Consensus 193 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~-~~~~~~~~~~~---~ 260 (335)
T 2owb_A 193 YDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------E-TYLRIKKNEYS---I 260 (335)
T ss_dssp STT-CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHHTCCC---C
T ss_pred cCc-ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-------H-HHHHHhcCCCC---C
Confidence 322 2223457899999999998888999999999999999999999998653211 1 11112211110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ ......+.+++.+||+.||++||+++|++++
T Consensus 261 ~-------~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 261 P-------KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred C-------ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 1122457789999999999999999999864
No 217
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.2e-38 Score=342.87 Aligned_cols=249 Identities=28% Similarity=0.415 Sum_probs=204.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.+.|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356888999999999999999864 68999999986543 3445778999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++... .+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+......
T Consensus 101 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 101 YLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CCTTEEHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred eCCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 99999999999653 4889999999999999999999 889999999999999999999999999999776432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
. .......|++.|+|||++.+..++.++||||||+++|||++|..||...... . ....+..... +.
T Consensus 173 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~-----~~ 238 (303)
T 3a7i_A 173 Q-IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-------K-VLFLIPKNNP-----PT 238 (303)
T ss_dssp B-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------H-HHHHHHHSCC-----CC
T ss_pred c-cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-------H-HHHHhhcCCC-----CC
Confidence 2 2223457899999999999999999999999999999999999998643211 1 1111111111 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... .....+.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 239 LEG----NYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CCS----SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred Ccc----ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111 123457889999999999999999999875
No 218
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.9e-38 Score=346.90 Aligned_cols=255 Identities=26% Similarity=0.319 Sum_probs=187.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceecccccee--------cC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCS--------FD 747 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~--------~~ 747 (959)
..+|++.++||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 457889999999999999999965 68999999987666666677899999999996 999999999883 33
Q ss_pred CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEECCCCcEEEcc
Q 002155 748 EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH--IIHRDIKASNILLNEEFEAKVAD 825 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~D 825 (959)
...++||||++ |+|.+++..... ...+++.+++.++.|++.||+||| +.| |+||||||+||+++.++.+||+|
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEec
Confidence 45789999996 699998876332 235899999999999999999999 788 99999999999999999999999
Q ss_pred ccccccccccccc-----------ccccccccccccCCCcC---CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCcccc
Q 002155 826 FGLARLISACETH-----------VSTDIAGTFGYIPPEYG---QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIE 891 (959)
Q Consensus 826 fg~~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~ 891 (959)
||+++........ ......||+.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-- 259 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-- 259 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--
Confidence 9999876432211 11134589999999988 5667889999999999999999999998542111
Q ss_pred CCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 892 GGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
....... . ...+ ......+.+++.+||+.||++||+++|++++|+++.
T Consensus 260 -----~~~~~~~-----~-~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 260 -----RIVNGKY-----S-IPPH-------DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp -----------C-----C-CCTT-------CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----HhhcCcc-----c-CCcc-------cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0000000 0 0000 011124678999999999999999999999999875
No 219
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=9.7e-37 Score=349.51 Aligned_cols=364 Identities=20% Similarity=0.191 Sum_probs=204.3
Q ss_pred CcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccC
Q 002155 52 NQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIP 131 (959)
Q Consensus 52 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p 131 (959)
.......+..++.+++|++|+|++|.+++ +| .+..+++|++|+|++|+++++ + ++.+++|++|++++|.+.+. |
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~ 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C
T ss_pred cCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e
Confidence 33344555678899999999999999985 46 688999999999999999975 2 77888888888888877653 2
Q ss_pred cccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCC
Q 002155 132 EYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSA 210 (959)
Q Consensus 132 ~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 210 (959)
+..+ +|++|++++|+++++ | ++.+++|++|++++|++++. .++.+++
T Consensus 102 --~~~l~~L~~L~L~~N~l~~l-------------------------~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~ 149 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTKL-------------------------D--VSQNPLLTYLNCARNTLTEI---DVSHNTQ 149 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSCC-------------------------C--CTTCTTCCEEECTTSCCSCC---CCTTCTT
T ss_pred --cCCCCcCCEEECCCCcCCee-------------------------c--CCCCCcCCEEECCCCcccee---ccccCCc
Confidence 2222 355555555555542 2 44555555555555555542 2555555
Q ss_pred CCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCcc
Q 002155 211 LSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLS 290 (959)
Q Consensus 211 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~ 290 (959)
|++|++++|...+.+ .+..+++|++|++++|+++++ | +..+++|+.|++++|++++.
T Consensus 150 L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~------------------ 206 (457)
T 3bz5_A 150 LTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL------------------ 206 (457)
T ss_dssp CCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC------------------
T ss_pred CCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee------------------
Confidence 555555555332222 245555566666666665543 2 55555556555555555420
Q ss_pred ccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEE
Q 002155 291 FIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGL 370 (959)
Q Consensus 291 ~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 370 (959)
.++.+++|+.|++++|++++ +| +..+++|++|++++|++++.. +..+++|+.|
T Consensus 207 ---------------------~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L 259 (457)
T 3bz5_A 207 ---------------------DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTL 259 (457)
T ss_dssp ---------------------CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEE
T ss_pred ---------------------ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEE
Confidence 02222333333333333333 12 344444555555555554332 2233444444
Q ss_pred EeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeecccccc
Q 002155 371 YLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLS 450 (959)
Q Consensus 371 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 450 (959)
++++| +|+.|++++|.+.+..| ++.+++|+.|++++|...+.+|. ..++|+.|++++|.
T Consensus 260 ~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~~-- 318 (457)
T 3bz5_A 260 HCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQNP-- 318 (457)
T ss_dssp ECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTCT--
T ss_pred eccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhcc--
Confidence 44443 23334444554443333 33445555555555554444442 22344444444441
Q ss_pred CCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCcc
Q 002155 451 GPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPET 530 (959)
Q Consensus 451 ~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 530 (959)
+++.|++++|++++. .++++++|+.|++++|++++ ++.|..|++++|.++|.
T Consensus 319 -------------~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~---- 370 (457)
T 3bz5_A 319 -------------KLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE---- 370 (457)
T ss_dssp -------------TCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE----
T ss_pred -------------cCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec----
Confidence 345555555555552 26667777777777777764 23455666777777654
Q ss_pred ccCCCCccEEecccCcCcccCCC
Q 002155 531 MCSLSNLLYLSLAENRLEGMVPR 553 (959)
Q Consensus 531 ~~~l~~L~~L~l~~N~l~~~~~~ 553 (959)
..+..|..+++++|+++|.+|.
T Consensus 371 -~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 371 -GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp -EEEEECCCBCCBTTBEEEECCT
T ss_pred -ceeeecCccccccCcEEEEcCh
Confidence 2445566677777777776664
No 220
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-37 Score=357.90 Aligned_cols=194 Identities=27% Similarity=0.386 Sum_probs=153.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC-----Cc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 749 (959)
.++|++.++||+|+||.||+|++. +++.||||++... .....+.+.+|+.+++.++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999865 6899999998653 334456788999999999999999999998433 56
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||+ +++|.++++... .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||++
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV----YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecc-ccchhhhcccCC----CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccc
Confidence 89999998 469999987643 5899999999999999999999 889999999999999999999999999999
Q ss_pred cccccccc--------------------------cccccccccccccCCCcC-CCCCCCCcCcchhHHHHHHHHHhC
Q 002155 830 RLISACET--------------------------HVSTDIAGTFGYIPPEYG-QSGRSTTRGDVYSFGVILLELVTG 879 (959)
Q Consensus 830 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg 879 (959)
+....... ......+||+.|+|||++ .+..++.++||||+||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 87642211 122345789999999975 566799999999999999999994
No 221
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.5e-37 Score=343.82 Aligned_cols=256 Identities=23% Similarity=0.349 Sum_probs=203.9
Q ss_pred HHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--------hhhHHHHHHHHHHHhcC-CCCceeccccc
Q 002155 674 ILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--------TQGHREFTAEMETLGKV-KHQNLVPLLGY 743 (959)
Q Consensus 674 ~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 743 (959)
.....++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.+++++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445578999999999999999999975 79999999886432 11234577899999999 79999999999
Q ss_pred eecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 744 CSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 744 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
+......++||||+++++|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKV----ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEE
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEE
Confidence 999999999999999999999998653 5889999999999999999999 789999999999999999999999
Q ss_pred cccccccccccccccccccccccccccCCCcCC------CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHH
Q 002155 824 ADFGLARLISACETHVSTDIAGTFGYIPPEYGQ------SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVG 897 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 897 (959)
+|||++....... ......||+.|+|||++. ...++.++|||||||++|||++|..||......
T Consensus 242 ~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-------- 311 (365)
T 2y7j_A 242 SDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-------- 311 (365)
T ss_dssp CCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------
T ss_pred EecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--------
Confidence 9999998765322 233457999999999865 336889999999999999999999998643111
Q ss_pred HHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 898 WVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.....+..+.... ...... .....+.+++.+||+.||++|||++|++++
T Consensus 312 ~~~~~i~~~~~~~--~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 312 LMLRMIMEGQYQF--SSPEWD----DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHHHHHHTCCCC--CHHHHS----SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHhCCCCC--CCcccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112222111100 000001 123457889999999999999999999874
No 222
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.5e-37 Score=333.64 Aligned_cols=247 Identities=24% Similarity=0.366 Sum_probs=195.7
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57888999999999999999976 78999999986532 233567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||+++++|.+++.... .+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+.....
T Consensus 91 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp ECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred eccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999999998754 4788999999999999999999 78999999999999999999999999999976643
Q ss_pred ccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLD 913 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (959)
. .......+++.|+|||.+.+..+ +.++||||+|+++|||++|+.||..... ......+...... .
T Consensus 164 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~---~ 230 (276)
T 2h6d_A 164 G--EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--------PTLFKKIRGGVFY---I 230 (276)
T ss_dssp ---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCC---C
T ss_pred C--cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------HHHHHHhhcCccc---C
Confidence 2 22234468999999999887765 6899999999999999999999864311 1122222222110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 914 PTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 914 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+ ......+.+++.+||+.||++|||++|++++
T Consensus 231 ~-------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 P-------EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred c-------hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1 1123457889999999999999999999875
No 223
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6e-38 Score=339.39 Aligned_cols=253 Identities=22% Similarity=0.314 Sum_probs=188.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467889999999999999999874 78999999987542 222333445666688889999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
||+++ ++.+++.........+++..++.++.|++.|++||| +. |++||||||+||+++.++.+||+|||.++...
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99975 888888764333456899999999999999999999 66 99999999999999999999999999997664
Q ss_pred cccccccccccccccccCCCcC----CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYG----QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
.. .......||+.|+|||.+ .+..++.++||||+|+++|||++|+.||...... .............
T Consensus 162 ~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~- 232 (290)
T 3fme_A 162 DD--VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPSP- 232 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCCC-
T ss_pred cc--ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch------HHHHHHHhccCCC-
Confidence 32 222334689999999985 5667899999999999999999999998642211 1112222222111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
... .......+.+++.+||+.||++|||++|+++
T Consensus 233 -----~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 233 -----QLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -----CCC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----Ccc---cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 000 1123346788999999999999999999987
No 224
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.4e-38 Score=375.35 Aligned_cols=249 Identities=26% Similarity=0.374 Sum_probs=199.3
Q ss_pred CeeccCCCeEEEEEEcC---CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEeccC
Q 002155 685 NIIGDGGFGTVYKAALP---DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMVN 759 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 759 (959)
+.||+|+||.||+|.+. .++.||||+++... ....+++.+|++++++++|||||++++++. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 47999999999999653 46789999987543 334577999999999999999999999986 4568999999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccccccc-
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETH- 838 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~- 838 (959)
|+|.++++... .+++.+++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999997643 5889999999999999999999 889999999999999999999999999999876533221
Q ss_pred -ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccccCccc
Q 002155 839 -VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTV 916 (959)
Q Consensus 839 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (959)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ..+...+..+.....
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~~~~~~i~~~~~~~~----- 593 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SEVTAMLEKGERMGC----- 593 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCCCCC-----
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCC-----
Confidence 1223356789999999998899999999999999999998 9999865322 123333333321111
Q ss_pred cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 917 LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 917 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+..+...+.+++.+||+.||++||+++++++.|+++..
T Consensus 594 ----p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 594 ----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ----CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11233568899999999999999999999999998854
No 225
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.9e-38 Score=354.24 Aligned_cols=252 Identities=12% Similarity=0.082 Sum_probs=178.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHH---HHHhcCCCCceecccc-------ce
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEM---ETLGKVKHQNLVPLLG-------YC 744 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~---~~l~~l~h~niv~~~~-------~~ 744 (959)
.+|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+ ..++. +||||++++. ++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 45888999999999999999965 78999999987643 23345577785 45555 6999887553 33
Q ss_pred ecC-----------------CceEEEEEeccCCCHHHHHhhhcCCccccCHHHH------HHHHHHHHHHHHHHHhcCCC
Q 002155 745 SFD-----------------EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKR------YKIACGAARGLAFLHHGFTP 801 (959)
Q Consensus 745 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~ 801 (959)
... ...|+||||++ |+|.+++..... .+.+..+ ..++.||+.||+||| +.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~ 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQ---SK 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHH---HT
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHH---HC
Confidence 222 23799999998 899999987531 2344455 678899999999999 88
Q ss_pred CeEeCCCCCCCEEECCCCcEEEcccccccccccccccccccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhC
Q 002155 802 HIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTG 879 (959)
Q Consensus 802 ~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg 879 (959)
||+||||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++||||+||++|||++|
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 99999999999999999999999999998654211 13456799999999987 6789999999999999999999
Q ss_pred CCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 880 KEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 880 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
+.||.......... .........................+.+++.+||+.||++|||+.|+++
T Consensus 290 ~~Pf~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 290 FLPFGLVTPGIKGS---------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SCSTTBCCTTCTTC---------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCcCcccccc---------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99997653331110 0000000000001111111233456888999999999999999999975
No 226
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.6e-38 Score=340.88 Aligned_cols=248 Identities=20% Similarity=0.339 Sum_probs=199.1
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 752 (959)
..++|++.+.||+|+||.||+|++. +++.||+|++... .......+.+|+..+..+ +||||+++++++..++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3467999999999999999999976 7899999998753 233455678899999999 99999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC--------------
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-------------- 818 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-------------- 818 (959)
||||+++++|.+++.........+++.+++.++.|++.||+||| +.||+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999999999875432345899999999999999999999 8899999999999999844
Q ss_pred -----CcEEEcccccccccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC
Q 002155 819 -----FEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG 892 (959)
Q Consensus 819 -----~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~ 892 (959)
..+||+|||.+...... ....||+.|+|||.+.+. .++.++||||+||++|||++|.+|+...
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------ 234 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP-----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------ 234 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS-----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS------
T ss_pred ccCCceEEEEcccccccccCCc-----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch------
Confidence 47999999999866432 223589999999988765 5668999999999999999998876431
Q ss_pred CchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 893 GNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ....+..... +.... .....+.+++.+||+.||++|||++|++++
T Consensus 235 -~----~~~~~~~~~~-----~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 235 -D----QWHEIRQGRL-----PRIPQ----VLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -H----HHHHHHTTCC-----CCCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -h----HHHHHHcCCC-----CCCCc----ccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1 1122222211 11111 123467889999999999999999999864
No 227
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.4e-38 Score=349.18 Aligned_cols=263 Identities=26% Similarity=0.373 Sum_probs=198.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 467889999999999999999976 58999999885433 233455789999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||++++++.++..... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||.++....
T Consensus 104 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHHSTT----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 9999999988876543 4889999999999999999999 88999999999999999999999999999976543
Q ss_pred ccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHH-----------H
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQ-----------K 902 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-----------~ 902 (959)
.. .......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ....+.. .
T Consensus 177 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~ 251 (331)
T 4aaa_A 177 PG-EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID----QLYHIMMCLGNLIPRHQEL 251 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCSCCHHHHHH
T ss_pred Cc-cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH----HHHHHHHHhCCCChhhhhH
Confidence 22 222345689999999988765 68999999999999999999999996543211 1110100 0
Q ss_pred hhcC-ccccccCccccCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKG-QAADVLDPTVLTADS-----KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~-~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... .......+....... ......+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 001111111111111 1234578899999999999999999999864
No 228
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.4e-37 Score=336.66 Aligned_cols=252 Identities=27% Similarity=0.404 Sum_probs=199.5
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
..++|++.+.||+|+||.||+|++. +|+.||+|.+.... ..+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3567999999999999999999875 58999999987533 34678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ..+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+......
T Consensus 105 ~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 105 YCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp CCTTEEHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred cCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 999999999997543 35889999999999999999999 889999999999999999999999999999766432
Q ss_pred cccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
. .......|++.|+|||.+.+..++.++||||+|+++|||++|..||..... ..... ...........
T Consensus 179 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~-~~~~~~~~~~~--- 246 (314)
T 3com_A 179 M-AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP-------MRAIF-MIPTNPPPTFR--- 246 (314)
T ss_dssp B-SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHH-HHHHSCCCCCS---
T ss_pred c-cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-------HHHHH-HHhcCCCcccC---
Confidence 2 222345689999999999988999999999999999999999999864321 11111 11111111110
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+.+++.+||+.||++|||+.+++++
T Consensus 247 ----~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 247 ----KPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp ----SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ----CcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111223468889999999999999999999863
No 229
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.9e-38 Score=364.21 Aligned_cols=251 Identities=25% Similarity=0.354 Sum_probs=204.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
.++|++.++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457999999999999999999976 78999999986432 34467789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE---CCCCcEEEccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLAR 830 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~ 830 (959)
|||+.+|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHTCS----CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 99999999999997654 5889999999999999999999 8899999999999999 567899999999998
Q ss_pred ccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
...... ......||+.|+|||++.+ .++.++||||+||++|+|++|.+||...... .+...+..+....
T Consensus 178 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~ 246 (484)
T 3nyv_A 178 HFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--------DILKKVEKGKYTF 246 (484)
T ss_dssp HBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCC
T ss_pred Eccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCC
Confidence 765322 2234579999999998865 6899999999999999999999999653211 1222232221111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. . +........+.+++.+||+.||++|||++|++++
T Consensus 247 ~--~----~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 E--L----PQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp C--S----GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C--C----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0 0 0112234567899999999999999999999864
No 230
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.3e-38 Score=343.81 Aligned_cols=264 Identities=24% Similarity=0.362 Sum_probs=185.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 468999999999999999999865 68899999986543 3345668899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhc----CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 756 YMVNGSLDLWLRNRT----GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
|+++++|.+++.... .....+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 999999999987521 11245899999999999999999999 78999999999999999999999999999976
Q ss_pred cccccc----cccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 832 ISACET----HVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 832 ~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
...... .......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... . .........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~---~~~~~~~~~ 243 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM----K---VLMLTLQND 243 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG----G---HHHHHHTSS
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh----h---HHHHHhccC
Confidence 543211 11233468999999998765 46899999999999999999999998653221 1 111111111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....................+.+++.+||+.||++||+++|++++
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 244 -PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -CCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -CCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000000000001111223467889999999999999999999873
No 231
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.8e-37 Score=354.28 Aligned_cols=261 Identities=19% Similarity=0.244 Sum_probs=203.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCC-ceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ-NLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.++||+|+||.||+|++ .+++.||||++..... ..++..|+++++.++|+ ++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999986 4689999998764332 23477899999999874 55556666677788899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE---CCCCcEEEccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL---NEEFEAKVADFGLARLI 832 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~~ 832 (959)
|+ +++|.+++.... ..+++.+++.|+.||+.||+||| +.|||||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~-g~sL~~ll~~~~---~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred CC-CCCHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 99 999999998644 35899999999999999999999 8899999999999999 57899999999999876
Q ss_pred cccccc------ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC
Q 002155 833 SACETH------VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG 906 (959)
Q Consensus 833 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (959)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~ 235 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVAT 235 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH-HHHHHHHHHHHHS
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH-HHHHHHhhccccc
Confidence 543221 122557999999999999999999999999999999999999999754322111 1111111111111
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 907 QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.... ... .+...+.+++.+||+.||++||++++|++.|+++.
T Consensus 236 ~~~~-----l~~----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 236 SIEA-----LCR----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp CHHH-----HHT----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred cHHH-----Hhc----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 0000 001 12346889999999999999999999999999874
No 232
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.2e-37 Score=348.39 Aligned_cols=272 Identities=21% Similarity=0.233 Sum_probs=199.4
Q ss_pred ccCHHHHHHHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccch-----------hhHHHHHHHHHHHhcCCCCc
Q 002155 668 RLTLVHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT-----------QGHREFTAEMETLGKVKHQN 736 (959)
Q Consensus 668 ~~~~~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~e~~~l~~l~h~n 736 (959)
+....++....++|++.+.||+|+||.||+|++.+|+.||||++..... ...+.+.+|++++++++|||
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 3445677778899999999999999999999988899999998854321 12367889999999999999
Q ss_pred eeccccceec-----CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCC
Q 002155 737 LVPLLGYCSF-----DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKAS 811 (959)
Q Consensus 737 iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 811 (959)
|+++++++.. ....++||||++ |++.+++.... ..+++..++.++.|++.||+||| +.||+||||||+
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 163 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR---IVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPG 163 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGG
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChH
Confidence 9999999843 335799999998 58888887543 35899999999999999999999 789999999999
Q ss_pred CEEECCCCcEEEcccccccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc
Q 002155 812 NILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890 (959)
Q Consensus 812 Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 890 (959)
||+++.++.+||+|||.++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......
T Consensus 164 NIl~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~- 240 (362)
T 3pg1_A 164 NILLADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY- 240 (362)
T ss_dssp GEEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-
T ss_pred HEEEcCCCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-
Confidence 999999999999999999754322 22334578999999998776 67899999999999999999999999653221
Q ss_pred cCCchHHHHHHHhhcCccc---------------ccc---CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 891 EGGNLVGWVFQKMKKGQAA---------------DVL---DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~---------------~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.....+.......... ... ...............+.+++.+||+.||++|||++|++++
T Consensus 241 ---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 241 ---NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp ---HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 1111111111000000 000 0000000011123457899999999999999999999874
No 233
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.8e-37 Score=370.02 Aligned_cols=249 Identities=25% Similarity=0.304 Sum_probs=204.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc---chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA---KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 751 (959)
..++|++.++||+|+||.||+|+.+ +++.||||++... .....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3468999999999999999999975 5889999998753 233455677899999987 7999999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+||||+++|+|.++++... .+++..++.++.||+.||+||| +.||+||||||+|||++.++++||+|||+++.
T Consensus 419 lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 9999999999999998764 5899999999999999999999 88999999999999999999999999999986
Q ss_pred cccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 832 ISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 832 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
.... ........||+.|+|||++.+..++.++|||||||++|||++|..||..... ..+.+.+......
T Consensus 492 ~~~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--------~~~~~~i~~~~~~-- 560 (674)
T 3pfq_A 492 NIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVA-- 560 (674)
T ss_dssp CCCT-TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHSSCCC--
T ss_pred cccC-CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhCCCC--
Confidence 4322 2233456899999999999999999999999999999999999999965321 1122333322111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTM-----LHVLK 951 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~ell~ 951 (959)
. +......+.+++.+||+.||++||++ +||++
T Consensus 561 -~-------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 561 -Y-------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp -C-------CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred -C-------CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1 11234567889999999999999997 77765
No 234
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5.6e-37 Score=357.80 Aligned_cols=252 Identities=27% Similarity=0.328 Sum_probs=201.7
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch-------------hhHHHHHHHHHHHhcCCCCceecccc
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT-------------QGHREFTAEMETLGKVKHQNLVPLLG 742 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~~~ 742 (959)
..++|++.++||+|+||+||+|+.+ +++.||||++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999975 578999999865321 23467889999999999999999999
Q ss_pred ceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC---
Q 002155 743 YCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF--- 819 (959)
Q Consensus 743 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~--- 819 (959)
++..+...++||||+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCc
Confidence 9999999999999999999999997754 5899999999999999999999 88999999999999998775
Q ss_pred cEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHH
Q 002155 820 EAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWV 899 (959)
Q Consensus 820 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 899 (959)
.+||+|||+++..... .......||+.|+|||++. +.++.++||||+||++|+|++|.+||..... ..+
T Consensus 187 ~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~ 255 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND--------QDI 255 (504)
T ss_dssp SEEECCCTTCEECCTT--SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHH
T ss_pred cEEEEECCCCEEcCCC--CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--------HHH
Confidence 6999999999876532 2234457999999999876 4689999999999999999999999965321 112
Q ss_pred HHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 900 FQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+..+.... ..... ......+.+++.+||+.||.+|||++|++++
T Consensus 256 ~~~i~~~~~~~--~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 256 IKKVEKGKYYF--DFNDW----KNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHHHHCCCCC--CHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHcCCCCC--Ccccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 23333221110 00000 1123467889999999999999999999864
No 235
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.1e-37 Score=345.51 Aligned_cols=255 Identities=23% Similarity=0.364 Sum_probs=198.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccc-hhhHHHHHHHHHH-HhcCCCCceeccccceecCCceEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAK-TQGHREFTAEMET-LGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
..++|++.+.||+|+||.||+|++ .+|+.||||++.... .....++..|... ++.++||||+++++++..++..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 346788899999999999999986 478999999987542 2233445555554 7888999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
|||+++ +|.+++.........+++..++.++.|++.||+||| +. ||+||||||+||+++.++.+||+|||+++..
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999976 999988764333456899999999999999999999 65 9999999999999999999999999999766
Q ss_pred ccccccccccccccccccCCCcCC----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQ----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
... .......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ...+........
T Consensus 205 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~------~~~~~~~~~~~~- 275 (340)
T 3an0_A 205 VDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPS- 275 (340)
T ss_dssp SCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCC-
T ss_pred ccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch------HHHHHHHhcCCC-
Confidence 422 1222347899999999854 447899999999999999999999998643211 111222222111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+... ...+...+.+++.+||+.||++||+++|++++
T Consensus 276 -----~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 276 -----PQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp -----CCCC---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -----CCCC---cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1000 11234568899999999999999999999873
No 236
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-37 Score=349.54 Aligned_cols=263 Identities=23% Similarity=0.285 Sum_probs=195.7
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecC-------
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------- 747 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------- 747 (959)
...++|++.+.||+|+||.||+|++ .+|+.||||++...... ..+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 3567899999999999999999986 47899999998654322 23699999999999999999988432
Q ss_pred -------------------------------CceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHH
Q 002155 748 -------------------------------EEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLH 796 (959)
Q Consensus 748 -------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH 796 (959)
...++||||++ |+|.+.+.........+++..+..++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999998 4888887654333456899999999999999999999
Q ss_pred hcCCCCeEeCCCCCCCEEEC-CCCcEEEcccccccccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHH
Q 002155 797 HGFTPHIIHRDIKASNILLN-EEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILL 874 (959)
Q Consensus 797 ~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ 874 (959)
+.||+||||||+||+++ .++.+||+|||.++...... ......+|+.|+|||++.+. .++.++||||+||++|
T Consensus 159 ---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 233 (383)
T 3eb0_A 159 ---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233 (383)
T ss_dssp ---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred ---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence 89999999999999997 68899999999998764322 23345789999999987765 4899999999999999
Q ss_pred HHHhCCCCCCCCCccccCCchHHHHHHHhhcC----------ccccccCccccCC-----CCHHHHHHHHHHHHHcccCC
Q 002155 875 ELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG----------QAADVLDPTVLTA-----DSKPMMLKMLRIAGDCLSDN 939 (959)
Q Consensus 875 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~d 939 (959)
||++|+.||...... +....+....... .......+..... ........+.+++.+||+.|
T Consensus 234 ell~g~~pf~~~~~~----~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (383)
T 3eb0_A 234 ELILGKPLFSGETSI----DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE 309 (383)
T ss_dssp HHHHSSCSSCCSSHH----HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred HHHhCCCCCCCCChH----HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence 999999999653221 1111111111000 0000001111111 11123345789999999999
Q ss_pred CCCCCCHHHHHHH
Q 002155 940 PAMRPTMLHVLKF 952 (959)
Q Consensus 940 P~~Rps~~ell~~ 952 (959)
|++|||+.|++++
T Consensus 310 P~~R~t~~e~l~h 322 (383)
T 3eb0_A 310 PDLRINPYEAMAH 322 (383)
T ss_dssp GGGSCCHHHHHTS
T ss_pred hhhCCCHHHHhcC
Confidence 9999999999864
No 237
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.3e-38 Score=340.02 Aligned_cols=257 Identities=27% Similarity=0.410 Sum_probs=196.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC--CCC--EEEEEEcccc---chhhHHHHHHHHHHHhcCCCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP--DGK--TVAVKKLSQA---KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +++ .||||++... .....+.+.+|++++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357889999999999999999853 333 6899988653 2344567889999999999999999999987654 8
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++++|.+++.... ..+++.+++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccc
Confidence 99999999999999998754 35889999999999999999999 8899999999999999999999999999998
Q ss_pred cccccccc--ccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 831 LISACETH--VSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 831 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
........ ......++..|+|||...+..++.++||||+|+++|||++ |..||..... .. ....+....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~-~~~~~~~~~ 241 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-------SQ-ILHKIDKEG 241 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HH-HHHHHHTSC
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-------HH-HHHHHHccC
Confidence 76433221 1223457789999999888888999999999999999999 9999864321 11 112221111
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
. .+. ........+.+++.+||+.||++|||+.++++.|+++.
T Consensus 242 ~----~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 242 E----RLP----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp C----CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred C----CCC----CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 0 011 11223456888999999999999999999999999875
No 238
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2e-37 Score=342.00 Aligned_cols=257 Identities=18% Similarity=0.251 Sum_probs=198.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc-CCCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceec--CCceEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL-PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSF--DEEKLLV 753 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~lv 753 (959)
.++|++.+.||+|+||.||+|++ .+++.||||++.... .+.+.+|+.++++++ ||||+++++++.. ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 46799999999999999999986 478999999987433 456889999999997 9999999999987 5678999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCC-cEEEccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEF-EAKVADFGLARLI 832 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~ 832 (959)
|||+++++|.++++. +++.++..++.|++.|++||| +.||+||||||+||+++.++ .+||+|||+++..
T Consensus 112 ~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 999999999998853 778899999999999999999 88999999999999999776 8999999999866
Q ss_pred ccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH---------HH
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF---------QK 902 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~---------~~ 902 (959)
.... ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||........ ....+. ..
T Consensus 182 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~---~l~~~~~~~~~~~~~~~ 256 (330)
T 3nsz_A 182 HPGQ--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD---QLVRIAKVLGTEDLYDY 256 (330)
T ss_dssp CTTC--CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH---HHHHHHHHHCHHHHHHH
T ss_pred CCCC--ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH---HHHHHHHhcCCchhhhH
Confidence 4322 2334578999999998776 6789999999999999999999999965432211 000000 00
Q ss_pred hhcCcc--------------ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQA--------------ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+..... ...................+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000 00000000111112234578899999999999999999999874
No 239
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=338.18 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=197.5
Q ss_pred CCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEEecc
Q 002155 680 NFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
+|....+||+|+||.||+|++. +++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 3445568999999999999864 688999999876655556778999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-CCcEEEcccccccccccccc
Q 002155 759 NGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKVADFGLARLISACET 837 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~~ 837 (959)
+++|.+++..... ...+++..++.++.|++.|++||| +.|++||||||+||+++. ++.+||+|||.+.......
T Consensus 103 ~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~- 177 (295)
T 2clq_A 103 GGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN- 177 (295)
T ss_dssp EEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence 9999999987532 234678899999999999999999 789999999999999987 8999999999997654322
Q ss_pred cccccccccccccCCCcCCCCC--CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCcc
Q 002155 838 HVSTDIAGTFGYIPPEYGQSGR--STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPT 915 (959)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (959)
.......|++.|+|||++.+.. ++.++||||||+++|||++|+.||...... ........... ..+.
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~------~~~~ 246 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP-----QAAMFKVGMFK------VHPE 246 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH-----HHHHHHHHHHC------CCCC
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch-----hHHHHhhcccc------cccc
Confidence 1223457899999999876543 788999999999999999999998532111 01111111110 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. +......+.+++.+||+.||++||+++|++++
T Consensus 247 ~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 247 I----PESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp C----CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred c----cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1 11233467889999999999999999999863
No 240
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.6e-38 Score=343.85 Aligned_cols=255 Identities=24% Similarity=0.312 Sum_probs=200.5
Q ss_pred HhcCCCCC-CeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCC-CCceeccccceecCCceE
Q 002155 677 ATNNFCKT-NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKL 751 (959)
Q Consensus 677 ~~~~f~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 751 (959)
-.++|.+. +.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++ ||||+++++++..++..+
T Consensus 26 ~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~ 105 (327)
T 3lm5_A 26 FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII 105 (327)
T ss_dssp HHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEE
Confidence 44567776 88999999999999876 68999999987543 233567889999999995 699999999999999999
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADFGL 828 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~ 828 (959)
+||||+++|+|.+++.... ...+++.+++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 106 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 106 LILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 9999999999999986532 245899999999999999999999 889999999999999988 78999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
++..... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... . ....+.....
T Consensus 181 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~-~~~~i~~~~~ 250 (327)
T 3lm5_A 181 SRKIGHA--CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ-------E-TYLNISQVNV 250 (327)
T ss_dssp CEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------H-HHHHHHHTCC
T ss_pred ccccCCc--cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-------H-HHHHHHhccc
Confidence 9876432 2223457899999999999999999999999999999999999998653221 1 1111111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .. ..........+.+++.+||+.||++|||++|++++
T Consensus 251 ~--~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 251 D--YS----EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp C--CC----TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred c--cC----chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0 01 11112234467889999999999999999999864
No 241
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-36 Score=348.92 Aligned_cols=320 Identities=22% Similarity=0.231 Sum_probs=183.0
Q ss_pred EEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccc
Q 002155 46 SLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNH 125 (959)
Q Consensus 46 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 125 (959)
.++.+++++. .+|..+. +++++|+|++|++++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 4455555544 4444332 355555555555554445555555555555555555555555555555555555555554
Q ss_pred cccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccc
Q 002155 126 IYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEI 205 (959)
Q Consensus 126 ~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~ 205 (959)
+.+..+. .|.++++|++|++++|.+++..|..|.++++|++|+|++|.+++..+..|
T Consensus 92 l~~~~~~-----------------------~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 148 (477)
T 2id5_A 92 LKLIPLG-----------------------VFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAF 148 (477)
T ss_dssp CCSCCTT-----------------------SSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSS
T ss_pred CCccCcc-----------------------cccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhc
Confidence 4433333 33334444444444444444444455555555555555555555555555
Q ss_pred cCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccC
Q 002155 206 GNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQAN 285 (959)
Q Consensus 206 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~ 285 (959)
.++++|++|+|++|.++.+.+..+..+++|+.|+|++|++.+..+..|..+++|+.|++++|.+.+.+|
T Consensus 149 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~----------- 217 (477)
T 2id5_A 149 SGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMT----------- 217 (477)
T ss_dssp TTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEEC-----------
T ss_pred cCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccC-----------
Confidence 556666666666666655555555566666666666666655555556666666666666554432111
Q ss_pred CCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCC
Q 002155 286 MPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSI 365 (959)
Q Consensus 286 ~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 365 (959)
.......+|+.|++++|+++...+..|..+++|++|+|++|++++..+..|..++
T Consensus 218 -------------------------~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (477)
T 2id5_A 218 -------------------------PNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELL 272 (477)
T ss_dssp -------------------------TTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCT
T ss_pred -------------------------cccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccc
Confidence 1111222455555555555544445666667777777777777666666667777
Q ss_pred cceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccC
Q 002155 366 KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDG 427 (959)
Q Consensus 366 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 427 (959)
+|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++..
T Consensus 273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 273 RLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp TCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred cCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 77777777777776666677777777777777777776666667777777777777777763
No 242
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.2e-37 Score=333.64 Aligned_cols=263 Identities=26% Similarity=0.354 Sum_probs=199.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
++|++.+.||+|+||.||+|+.+ +|+.||||++.... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999876 68999999986543 2234668899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|++ ++|.+++..... ..+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||+|||.+......
T Consensus 83 ~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 997 599999976532 34788999999999999999999 889999999999999999999999999999766432
Q ss_pred cccccccccccccccCCCcCCCCC-CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc----
Q 002155 836 ETHVSTDIAGTFGYIPPEYGQSGR-STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD---- 910 (959)
Q Consensus 836 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 910 (959)
. .......+|+.|+|||.+.+.. ++.++||||+|+++|||++|+.||...... +....+...........
T Consensus 157 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 157 V-RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI----DQLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp S-BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTG
T ss_pred c-cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHHHHhCCCchhhhhHh
Confidence 2 2223446899999999887765 799999999999999999999999653221 11111111111100000
Q ss_pred ----ccCccccC---CC----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 ----VLDPTVLT---AD----SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ----~~~~~~~~---~~----~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...+.... .. .......+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 00 01133567899999999999999999999873
No 243
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.5e-37 Score=342.93 Aligned_cols=264 Identities=25% Similarity=0.294 Sum_probs=198.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceec--------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSF-------- 746 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 746 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 367899999999999999999974 78999999986433 2234567899999999999999999999876
Q ss_pred CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 747 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
.+..++||||+++ ++.+.+.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL---VKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccc
Confidence 3468999999975 7777776543 35899999999999999999999 889999999999999999999999999
Q ss_pred cccccccccc---ccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 827 GLARLISACE---THVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 827 g~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
|+++...... ........||+.|+|||++.+ ..++.++||||+||++|||++|++||...... .....+...
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~i~~~ 244 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ----HQLALISQL 244 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHH
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHH
Confidence 9998764221 122234568999999998765 45799999999999999999999998753221 111111111
Q ss_pred hhcCccccc-----------cCccccC-CCCHHH------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQAADV-----------LDPTVLT-ADSKPM------MLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~~~~-----------~~~~~~~-~~~~~~------~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......... ....... ....+. ...+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 245 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp HCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 111100000 0000000 000111 2347899999999999999999999874
No 244
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.6e-37 Score=344.12 Aligned_cols=263 Identities=23% Similarity=0.249 Sum_probs=191.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecCC------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDE------ 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 748 (959)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367889999999999999999865 6889999998653 2334566889999999999999999999987654
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+++ +|.+++.. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeec
Confidence 67999999975 78888752 3788999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC--------Cc------
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG--------GN------ 894 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~--------~~------ 894 (959)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........- ..
T Consensus 174 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 174 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHT
T ss_pred ccccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9765422 2233457899999999999999999999999999999999999999653211000 00
Q ss_pred -hHHHHHHHhhcCcccc------ccCccccCCC---CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 895 -LVGWVFQKMKKGQAAD------VLDPTVLTAD---SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 895 -~~~~~~~~~~~~~~~~------~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+...+........... .......+.. .......+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000000000000 0000000111 12335678999999999999999999999875
No 245
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2e-37 Score=344.80 Aligned_cols=259 Identities=22% Similarity=0.334 Sum_probs=204.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhh-----------------HHHHHHHHHHHhcCCCCceecc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQG-----------------HREFTAEMETLGKVKHQNLVPL 740 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~~ 740 (959)
.++|++.+.||+|+||.||+|++ +++.||||++....... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999999 89999999986532211 1778999999999999999999
Q ss_pred ccceecCCceEEEEEeccCCCHHHH------HhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCE
Q 002155 741 LGYCSFDEEKLLVYEYMVNGSLDLW------LRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFT-PHIIHRDIKASNI 813 (959)
Q Consensus 741 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~Ni 813 (959)
++++...+..++||||+++|+|.++ +.... ...+++..++.++.|++.|++||| + .|++||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhE
Confidence 9999999999999999999999998 54321 346899999999999999999999 6 8999999999999
Q ss_pred EECCCCcEEEcccccccccccccccccccccccccccCCCcCCCC-CCCC-cCcchhHHHHHHHHHhCCCCCCCCCcccc
Q 002155 814 LLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSG-RSTT-RGDVYSFGVILLELVTGKEPTGPEFKDIE 891 (959)
Q Consensus 814 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwslG~il~elltg~~p~~~~~~~~~ 891 (959)
+++.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||+|+++|||++|..||......
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-- 258 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-- 258 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--
T ss_pred EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--
Confidence 9999999999999999875432 23445789999999998877 5665 999999999999999999999754321
Q ss_pred CCchHHHHHHHhhcCccccccC------c---cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 892 GGNLVGWVFQKMKKGQAADVLD------P---TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......+.......... + .............+.+++.+||+.||++||+++|++++
T Consensus 259 -----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 259 -----VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp -----HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -----HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11222222221111000 0 00000012344578899999999999999999999873
No 246
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=5.2e-37 Score=333.44 Aligned_cols=251 Identities=24% Similarity=0.317 Sum_probs=202.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---------hhhHHHHHHHHHHHhcCC-CCceeccccceec
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---------TQGHREFTAEMETLGKVK-HQNLVPLLGYCSF 746 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~ 746 (959)
.++|++.+.||+|+||.||+|+++ +|+.||||++.... ....+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467889999999999999999875 68899999986432 122456778999999995 9999999999999
Q ss_pred CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccc
Q 002155 747 DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADF 826 (959)
Q Consensus 747 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 826 (959)
++..++||||+++++|.+++.... .+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecc
Confidence 999999999999999999998753 5889999999999999999999 889999999999999999999999999
Q ss_pred ccccccccccccccccccccccccCCCcCC------CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQ------SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
|.+....... ......+++.|+|||++. ...++.++||||+|+++|||++|..||..... .. ..
T Consensus 169 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~-~~ 238 (298)
T 1phk_A 169 GFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-------ML-ML 238 (298)
T ss_dssp TTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HH-HH
T ss_pred cchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-------HH-HH
Confidence 9998764322 223456899999999864 55688999999999999999999999864321 11 11
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
..+....... ..+........+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 239 RMIMSGNYQF------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHTCCCC------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHhcCCccc------CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 2222211110 01111233456889999999999999999999986
No 247
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.8e-37 Score=344.12 Aligned_cols=262 Identities=24% Similarity=0.318 Sum_probs=199.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecC-----Cce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +++.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 467999999999999999999865 68899999987533 33446788999999999999999999998654 468
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||+++ +|.+++... .+++.++..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.++
T Consensus 106 ~iv~e~~~~-~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLMET-DLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCSE-EHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccCc-CHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 999999974 999998764 3889999999999999999999 8899999999999999999999999999998
Q ss_pred ccccccccc--cccccccccccCCCcCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 831 LISACETHV--STDIAGTFGYIPPEYGQ-SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 831 ~~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
......... .....||+.|+|||++. +..++.++||||+||++|||++|+.||...... +....+........
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~i~~~~~~~~ 252 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL----DQLNHILGILGSPS 252 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG----GHHHHHHHHHCSCC
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH----HHHHHHHHHhCCCC
Confidence 765332221 23457999999999754 445899999999999999999999999654221 11111111111100
Q ss_pred cc---------------cccCcccc--CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AA---------------DVLDPTVL--TADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~---------------~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ....+... ..........+.+++.+||+.||++|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00000000 00001123467899999999999999999999874
No 248
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=353.36 Aligned_cols=268 Identities=25% Similarity=0.295 Sum_probs=183.1
Q ss_pred cCCCC-CCeeccCCCeEEEEEEcC---CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceecccccee--cCCceEE
Q 002155 679 NNFCK-TNIIGDGGFGTVYKAALP---DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS--FDEEKLL 752 (959)
Q Consensus 679 ~~f~~-~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~l 752 (959)
+.|++ +++||+|+||.||+|+++ +++.||||++..... ...+.+|+.++++++||||+++++++. .+...++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34665 568999999999999965 578999999975432 346789999999999999999999994 4678899
Q ss_pred EEEeccCCCHHHHHhhhc-----CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE----CCCCcEEE
Q 002155 753 VYEYMVNGSLDLWLRNRT-----GSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL----NEEFEAKV 823 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl 823 (959)
||||+++ +|.+++.... .....+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999975 8888775432 11224889999999999999999999 8899999999999999 67789999
Q ss_pred cccccccccccccc--cccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccC-----Cch
Q 002155 824 ADFGLARLISACET--HVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEG-----GNL 895 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~-----~~~ 895 (959)
+|||+++....... .......||+.|+|||++.+. .++.++||||+||++|||++|++||.....+... .+.
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987643211 222345789999999988774 5899999999999999999999999754332111 011
Q ss_pred HHHHHHHhhcCccccccC---------------ccccCCCCH---------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 002155 896 VGWVFQKMKKGQAADVLD---------------PTVLTADSK---------PMMLKMLRIAGDCLSDNPAMRPTMLHVLK 951 (959)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~---------~~~~~l~~li~~cl~~dP~~Rps~~ell~ 951 (959)
...+...+.......+.. ......... .....+.+++.+||+.||++|||++|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 111111111111000000 000000000 01335788999999999999999999987
Q ss_pred H
Q 002155 952 F 952 (959)
Q Consensus 952 ~ 952 (959)
+
T Consensus 334 h 334 (405)
T 3rgf_A 334 D 334 (405)
T ss_dssp S
T ss_pred C
Confidence 4
No 249
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1e-37 Score=372.55 Aligned_cols=256 Identities=23% Similarity=0.365 Sum_probs=203.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCC----CCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPD----GKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 752 (959)
.++|++.+.||+|+||.||+|++.. +..||||++.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 4678889999999999999998742 4579999987543 334567889999999999999999999985 467899
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||+++|+|.++++... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 468 v~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEECCTTCBHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEcCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 999999999999998654 34889999999999999999999 789999999999999999999999999999876
Q ss_pred ccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhcCccccc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADV 911 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (959)
............+|+.|+|||++.+..++.++|||||||++|||++ |..||...... + +...+..+...
T Consensus 542 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~----~----~~~~i~~~~~~-- 611 (656)
T 2j0j_A 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----D----VIGRIENGERL-- 611 (656)
T ss_dssp CC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----H----HHHHHHHTCCC--
T ss_pred CCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH----H----HHHHHHcCCCC--
Confidence 5433333334457789999999988899999999999999999997 89998643211 1 12222222111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 002155 912 LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIK 957 (959)
Q Consensus 912 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 957 (959)
.. +..+...+.+++.+||+.||++||++.|+++.|+++.
T Consensus 612 ---~~----~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 612 ---PM----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp ---CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CC----CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 11 1123346788999999999999999999999999874
No 250
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.5e-37 Score=350.44 Aligned_cols=261 Identities=25% Similarity=0.275 Sum_probs=192.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCc------eE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE------KL 751 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------~~ 751 (959)
..+|++.++||+|+||.||+|++..+..||+|++...... ..+|+++++.++||||+++++++...+. .+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 3568889999999999999999877777999988643322 2369999999999999999999854332 78
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC-CCCcEEEccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN-EEFEAKVADFGLAR 830 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~ 830 (959)
+||||++++.+ +.+.........+++..++.++.|+++||+||| +.||+||||||+||+++ .++.+||+|||+++
T Consensus 115 lv~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPETVY-RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEEHH-HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCccHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 99999987544 433322222346889999999999999999999 88999999999999998 78999999999998
Q ss_pred ccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC---
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG--- 906 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 906 (959)
...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||....... ....+.......
T Consensus 191 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~----~l~~i~~~~g~p~~~ 264 (394)
T 4e7w_A 191 ILIAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID----QLVEIIKVLGTPSRE 264 (394)
T ss_dssp ECCTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCHH
T ss_pred cccCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCCHH
Confidence 764322 23345789999999987664 58999999999999999999999996532211 111111110000
Q ss_pred -------ccccccCccccCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 -------QAADVLDPTVLTA-----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 -------~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.......+..... ........+.+++.+||+.||++|||+.|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 265 QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0000000111110 011133468899999999999999999999875
No 251
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.2e-37 Score=340.24 Aligned_cols=252 Identities=25% Similarity=0.345 Sum_probs=195.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--------hhHHHHHHHHHHHhcCCCCceeccccceecCC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--------QGHREFTAEMETLGKVKHQNLVPLLGYCSFDE 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 748 (959)
.++|++.+.||+|+||.||+|++. +++.||||++..... .....+.+|++++++++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 467999999999999999999875 588999999864321 12335788999999999999999999987654
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc---EEEcc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE---AKVAD 825 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~D 825 (959)
.++||||+++++|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 899999999999999987543 5889999999999999999999 889999999999999987654 99999
Q ss_pred cccccccccccccccccccccccccCCCcC---CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 826 FGLARLISACETHVSTDIAGTFGYIPPEYG---QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 826 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
||.++..... .......||+.|+|||++ ....++.++||||+||++|||++|..||...... ..+.. .
T Consensus 161 fg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~----~ 231 (322)
T 2ycf_A 161 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ---VSLKD----Q 231 (322)
T ss_dssp CTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS---SCHHH----H
T ss_pred Cccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH---HHHHH----H
Confidence 9999866422 122334689999999985 3567899999999999999999999999653222 11222 1
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+..+... ..+.... .....+.+++.+||+.||++||+++|++++
T Consensus 232 ~~~~~~~--~~~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 232 ITSGKYN--FIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHHTCCC--CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHhCccc--cCchhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 2211110 0111111 123467899999999999999999999863
No 252
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.6e-37 Score=350.23 Aligned_cols=260 Identities=25% Similarity=0.289 Sum_probs=193.0
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecC------CceE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------EEKL 751 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~ 751 (959)
.+|+..++||+|+||.||+|++. +|+.||||++..... ...+|+++++.++||||++++++|... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46888999999999999999975 589999999865432 234699999999999999999987432 2357
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-CcEEEccccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-FEAKVADFGLAR 830 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~ 830 (959)
+||||+++ ++.+.+.........+++..++.++.||++||+||| +.||+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999986 676666543323346899999999999999999999 8999999999999999965 678999999998
Q ss_pred ccccccccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc----
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK---- 905 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 905 (959)
...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... +....+......
T Consensus 206 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~----~~l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 206 QLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV----DQLVEIIKVLGTPTRE 279 (420)
T ss_dssp ECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCSCCHH
T ss_pred hcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCCHH
Confidence 764322 22345789999999988664 7899999999999999999999999653211 111111111000
Q ss_pred ------CccccccCccccCCC-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 906 ------GQAADVLDPTVLTAD-----SKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 906 ------~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........+...... .......+.+++.+||+.||++||++.|++++
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000111111111110 11223568899999999999999999999864
No 253
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.7e-37 Score=345.96 Aligned_cols=258 Identities=26% Similarity=0.327 Sum_probs=181.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc--chhhHHHHHHHHHHHhcCCCCceeccccceecC------C
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA--KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFD------E 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 748 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 468999999999999999999864 6899999998653 233456688999999999999999999998654 5
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+ +++|.++++.. .+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC-----C-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 67999988752 4889999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+.+......
T Consensus 179 a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~l~~i~~~~g~p~ 250 (367)
T 2fst_X 179 ARHTAD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI----DQLKLILRLVGTPG 250 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCC
T ss_pred cccccc----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCC
Confidence 976542 1234578999999998876 67899999999999999999999999653211 11111111111000
Q ss_pred cc-----------cccCc-cccCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AA-----------DVLDP-TVLTADS-----KPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~-----------~~~~~-~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ..... ...+... ......+.+++.+||..||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00 00000 0000000 0123457889999999999999999999874
No 254
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-36 Score=329.07 Aligned_cols=251 Identities=23% Similarity=0.365 Sum_probs=197.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc----hhhHHHHHHHHHHHhcCCCCceeccccce--ecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK----TQGHREFTAEMETLGKVKHQNLVPLLGYC--SFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~--~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++ ......
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999975 68899999987542 23456788999999999999999999998 445678
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||++++ +.+++.... ...+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+|||.+.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999876 777776543 235889999999999999999999 8899999999999999999999999999998
Q ss_pred cccccc-ccccccccccccccCCCcCCCCC--CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 831 LISACE-THVSTDIAGTFGYIPPEYGQSGR--STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 831 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
...... ........||+.|+|||+..+.. ++.++||||+|+++|||++|+.||.... .. .....+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~-~~~~~i~~~~ 229 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-------IY-KLFENIGKGS 229 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-------HH-HHHHHHHHCC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-------HH-HHHHHHhcCC
Confidence 654321 22223456899999999887644 3779999999999999999999986431 11 1222222221
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. .. .......+.+++.+||+.||++|||++|++++
T Consensus 230 ~------~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 Y------AI----PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp C------CC----CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred C------CC----CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1 01 11123467789999999999999999999975
No 255
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=9.2e-37 Score=347.60 Aligned_cols=198 Identities=27% Similarity=0.317 Sum_probs=170.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC------CCCceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV------KHQNLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~~ 750 (959)
..+|++.++||+|+||.||+|++. +++.||||++.... .....+.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999865 58899999997542 3345677788888777 577999999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc--EEEccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE--AKVADFGL 828 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~ 828 (959)
++||||++ ++|.+++..... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++. +||+|||+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 99999996 699999887542 34889999999999999999999 789999999999999999887 99999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 886 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 886 (959)
++.... ......||+.|+|||++.+..++.++|||||||++|||++|.+||...
T Consensus 249 a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 249 SCYEHQ----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CEETTC----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecCC----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 975432 223457899999999999999999999999999999999999998654
No 256
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=8.1e-37 Score=332.78 Aligned_cols=252 Identities=23% Similarity=0.360 Sum_probs=192.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec----------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF---------- 746 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~---------- 746 (959)
.++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 467899999999999999999965 7899999998643 3345678899999999999999999998754
Q ss_pred ---CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEE
Q 002155 747 ---DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKV 823 (959)
Q Consensus 747 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 823 (959)
....++||||+++|+|.+++.... ..+++..++.++.|++.|++||| +.|++||||||+||+++.++.+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEE
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEE
Confidence 356799999999999999998643 35788899999999999999999 789999999999999999999999
Q ss_pred ccccccccccccc-------------ccccccccccccccCCCcCCCC-CCCCcCcchhHHHHHHHHHhCCCCCCCCCcc
Q 002155 824 ADFGLARLISACE-------------THVSTDIAGTFGYIPPEYGQSG-RSTTRGDVYSFGVILLELVTGKEPTGPEFKD 889 (959)
Q Consensus 824 ~Dfg~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~ 889 (959)
+|||.+....... ........|++.|+|||++.+. .++.++||||+||++|||++ ||......
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~ 234 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER 234 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH
Confidence 9999997654211 1112344689999999988754 68999999999999999998 54321110
Q ss_pred ccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 890 IEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......+..... ...+.........+.+++.+||+.||++|||+++++++
T Consensus 235 -------~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 -------VNILKKLRSVSI------EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp -------HHHHHHHHSTTC------CCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -------HHHHHhcccccc------ccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111222222111 11111222334457889999999999999999999874
No 257
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=337.78 Aligned_cols=256 Identities=21% Similarity=0.341 Sum_probs=197.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 755 (959)
.++|++.+.||+|+||.||+|++.+ .||+|++.... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4678899999999999999999753 59999986432 2233457789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccc
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISAC 835 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 835 (959)
|+++++|.+++.... ..+++.+++.++.|++.|++||| +.|++||||||+||+++ ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp CCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred cccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 999999999997643 35788999999999999999999 88999999999999998 679999999998754321
Q ss_pred c----ccccccccccccccCCCcCCC---------CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 836 E----THVSTDIAGTFGYIPPEYGQS---------GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 836 ~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
. ........|++.|+|||++.+ ..++.++||||||+++|||++|+.||...... .....
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~ 254 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--------AIIWQ 254 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--------HHHHH
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHH
Confidence 1 112223458999999998764 45788999999999999999999998643211 12222
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
+........ .. ......+.+++.+||+.||++|||++++++.|+++..
T Consensus 255 ~~~~~~~~~-----~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 255 MGTGMKPNL-----SQ---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp HHTTCCCCC-----CC---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred hccCCCCCC-----Cc---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 222211111 11 0122357789999999999999999999999998753
No 258
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.2e-36 Score=342.48 Aligned_cols=200 Identities=27% Similarity=0.284 Sum_probs=169.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CC-----ceeccccceecCCce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQ-----NLVPLLGYCSFDEEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +++.||||++... .....++..|+.+++.++ |+ +++++++++...+..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 468999999999999999999865 6889999999743 233456778888888875 44 489999999999999
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC--CCCcEEEccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN--EEFEAKVADFGL 828 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfg~ 828 (959)
++||||++ |+|.+++..... ..+++..+..++.|++.||+|||.. ..||+||||||+||+++ .++.+||+|||+
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEecCC-CCHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 99999996 599999987542 3488999999999999999999932 47999999999999995 477899999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCC
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPE 886 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 886 (959)
++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 208 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 208 SCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9876421 23457899999999999999999999999999999999999999753
No 259
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.9e-37 Score=347.15 Aligned_cols=264 Identities=23% Similarity=0.234 Sum_probs=200.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC--------CCceecccccee---
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK--------HQNLVPLLGYCS--- 745 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~--- 745 (959)
.++|++.++||+|+||.||+|++. +++.||||++... ....+.+.+|+++++.++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367999999999999999999864 6889999998753 334566888999999985 788999999987
Q ss_pred -cCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEECCCC----
Q 002155 746 -FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLNEEF---- 819 (959)
Q Consensus 746 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~---- 819 (959)
.....++||||+ ++++.+++.... ...+++..++.++.||+.||+||| +. ||+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhh
Confidence 556789999999 556766665432 235889999999999999999999 77 999999999999999775
Q ss_pred ---------------------------------------------cEEEcccccccccccccccccccccccccccCCCc
Q 002155 820 ---------------------------------------------EAKVADFGLARLISACETHVSTDIAGTFGYIPPEY 854 (959)
Q Consensus 820 ---------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~ 854 (959)
.+||+|||.++..... .....||+.|+|||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChh
Confidence 7999999999865422 234578999999999
Q ss_pred CCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC--chHHHHHHHhhcC--------c-cccccCc--------c
Q 002155 855 GQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG--NLVGWVFQKMKKG--------Q-AADVLDP--------T 915 (959)
Q Consensus 855 ~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~~~--------~-~~~~~~~--------~ 915 (959)
+.+..++.++|||||||++|||++|+.||.......... .....+....... . ....+.. .
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 999999999999999999999999999997543221110 0111111111000 0 0000000 0
Q ss_pred -----------ccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 916 -----------VLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 916 -----------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
............+.+++.+||+.||++|||++|++++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0012346677789999999999999999999999874
No 260
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=338.79 Aligned_cols=253 Identities=26% Similarity=0.413 Sum_probs=194.9
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceec------CC
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSF------DE 748 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~ 748 (959)
..++|++.+.||+|+||.||+|++. +++.||||++.... ...+.+.+|+.+++++ +||||+++++++.. .+
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 4678999999999999999999974 68999999986433 2346788999999999 79999999999876 46
Q ss_pred ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 749 EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 749 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
..++||||+++|+|.+++.... ...+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 175 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGV 175 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcC
Confidence 7899999999999999998643 235888999999999999999999 78999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHh
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKM 903 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (959)
+....... .......|++.|+|||++. +..++.++||||+||++|||++|..||...... ..... +
T Consensus 176 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~-~ 246 (326)
T 2x7f_A 176 SAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------RALFL-I 246 (326)
T ss_dssp TC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHH-H
T ss_pred ceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-------HHHHH-h
Confidence 97654321 1223456899999999876 567899999999999999999999998543211 11111 1
Q ss_pred hcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 904 KKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..... +.... ......+.+++.+||..||++||++++++++
T Consensus 247 ~~~~~-----~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 247 PRNPA-----PRLKS---KKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHSCC-----CCCSC---SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hcCcc-----ccCCc---cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111 11111 1123467889999999999999999999873
No 261
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=9.4e-37 Score=336.04 Aligned_cols=264 Identities=25% Similarity=0.324 Sum_probs=200.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEc--CCCCEEEEEEccccch--hhHHHHHHHHHHHhcC---CCCceecccccee----
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAAL--PDGKTVAVKKLSQAKT--QGHREFTAEMETLGKV---KHQNLVPLLGYCS---- 745 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~---- 745 (959)
+.++|++.+.||+|+||.||+|++ .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 3678999999864322 1223456677776666 8999999999986
Q ss_pred -cCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEc
Q 002155 746 -FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVA 824 (959)
Q Consensus 746 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 824 (959)
.....++||||++ |+|.+++..... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999998 599999987542 24889999999999999999999 8899999999999999999999999
Q ss_pred ccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhh
Q 002155 825 DFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMK 904 (959)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (959)
|||.++..... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+.....
T Consensus 163 Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~ 236 (326)
T 1blx_A 163 DFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV----DQLGKILDVIG 236 (326)
T ss_dssp SCCSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHC
T ss_pred cCcccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHHHcC
Confidence 99999765432 2233457899999999999889999999999999999999999999653221 11111221111
Q ss_pred cCcccccc-------------CccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 905 KGQAADVL-------------DPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 905 ~~~~~~~~-------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
......+. ...............+.+++.+||+.||++||+++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11000000 0000011112234567889999999999999999999864
No 262
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.8e-36 Score=334.24 Aligned_cols=265 Identities=21% Similarity=0.291 Sum_probs=204.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEc--CCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc------eeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAAL--PDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN------LVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|.+ .+++.||||++.... ...+.+.+|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35789999999999999999986 368899999987532 33566788999999887654 9999999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC------------
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE------------ 817 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~------------ 817 (959)
.++||||+ +++|.+++..... ..+++.+++.++.|++.||+||| +.||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred EEEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccc
Confidence 99999999 8899999976542 35789999999999999999999 889999999999999987
Q ss_pred -------CCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc
Q 002155 818 -------EFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890 (959)
Q Consensus 818 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 890 (959)
++.+||+|||.++.... ......||+.|+|||++.+..++.++||||+||++|||++|..||......
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~- 240 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDE----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK- 240 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTS----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH-
T ss_pred cccccccCCCceEeeCcccccCcc----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH-
Confidence 66899999999976432 223457899999999999989999999999999999999999999653221
Q ss_pred cCCchHHHHHHHhhcCc--------ccccc---------------------Cc-cccCCCCHHHHHHHHHHHHHcccCCC
Q 002155 891 EGGNLVGWVFQKMKKGQ--------AADVL---------------------DP-TVLTADSKPMMLKMLRIAGDCLSDNP 940 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~~~--------~~~~~---------------------~~-~~~~~~~~~~~~~l~~li~~cl~~dP 940 (959)
+....+........ ..... .+ .............+.+++.+||+.||
T Consensus 241 ---~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 241 ---EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp ---HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred ---HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 11111111100000 00000 00 00011233456778999999999999
Q ss_pred CCCCCHHHHHHH--HHhhh
Q 002155 941 AMRPTMLHVLKF--LKEIK 957 (959)
Q Consensus 941 ~~Rps~~ell~~--L~~l~ 957 (959)
++|||++|++++ +++++
T Consensus 318 ~~Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 318 AKRITLREALKHPFFDLLK 336 (339)
T ss_dssp TTSCCHHHHTTSGGGGGGG
T ss_pred ccccCHHHHhcCHHHHHHh
Confidence 999999999865 55443
No 263
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.3e-36 Score=325.01 Aligned_cols=252 Identities=25% Similarity=0.348 Sum_probs=202.2
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3468999999999999999999976 68999999986532 33456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC---CcEEEccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE---FEAKVADFGLAR 830 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~ 830 (959)
|||+++++|.+++.... .+++.+++.++.|++.|++||| +.|++||||||+||+++.+ +.+||+|||.+.
T Consensus 100 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 99999999999987654 5889999999999999999999 8899999999999999764 479999999997
Q ss_pred ccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcccc
Q 002155 831 LISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAAD 910 (959)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (959)
...... ......+++.|+|||.+.+ .++.++||||+|+++|+|++|..||...... .+...+..+....
T Consensus 173 ~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~ 241 (287)
T 2wei_A 173 CFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGKYAF 241 (287)
T ss_dssp TBCCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCC
T ss_pred eecCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCC
Confidence 654322 2233468899999998765 4899999999999999999999998653211 1222222221110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 911 VLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 911 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+... .......+.+++.+||+.||++|||++|++++
T Consensus 242 --~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 242 --DLPQ----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp --CSGG----GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --Cchh----hhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0000 11223467889999999999999999999983
No 264
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.3e-36 Score=334.86 Aligned_cols=257 Identities=24% Similarity=0.358 Sum_probs=178.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHH-HHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEME-TLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... .....++..|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367889999999999999999975 68999999987543 233344555555 777889999999999999999999999
Q ss_pred EeccCCCHHHHHhhhc-CCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 755 EYMVNGSLDLWLRNRT-GSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||+++ +|.+++.... .....+++..+..++.|++.|+.||| +. ||+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99986 8888776421 11246889999999999999999999 66 9999999999999999999999999999766
Q ss_pred ccccccccccccccccccCCCcC----CCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 833 SACETHVSTDIAGTFGYIPPEYG----QSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 833 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
.... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||....... .......
T Consensus 177 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----------~~~~~~~- 243 (327)
T 3aln_A 177 VDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----------DQLTQVV- 243 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------------CCCC-
T ss_pred cccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----------HHHHHHh-
Confidence 4321 22234689999999998 45678999999999999999999999986432110 0111100
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
....+.............+.+++.+||+.||++||++.|++++
T Consensus 244 -~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 244 -KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0001111111112234568889999999999999999999763
No 265
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.5e-36 Score=330.34 Aligned_cols=252 Identities=22% Similarity=0.345 Sum_probs=195.5
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEcccc--chhhHHHHHHHHHHHhcCC--CCceeccccceecCCceEE
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQA--KTQGHREFTAEMETLGKVK--HQNLVPLLGYCSFDEEKLL 752 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~l 752 (959)
..++|++.+.||+|+||.||+|++.+++.||||++... .....+.+.+|++++++++ ||||+++++++..++..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 45679999999999999999999988999999998643 3344567889999999997 5999999999999999999
Q ss_pred EEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 753 VYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 753 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||| +.+++|.+++.... .+++..++.++.|+++||+||| +.||+||||||+||++++ +.+||+|||+++..
T Consensus 106 v~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred EEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 999 56889999998753 5788999999999999999999 789999999999999964 79999999999876
Q ss_pred cccccc-ccccccccccccCCCcCCC-----------CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 833 SACETH-VSTDIAGTFGYIPPEYGQS-----------GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 833 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
...... ......|++.|+|||.+.+ ..++.++||||+|+++|||++|+.||...... .....
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~ 250 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------ISKLH 250 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHH
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH------HHHHH
Confidence 432221 1234468999999998765 46788999999999999999999998653221 11122
Q ss_pred HHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 901 QKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.......... ... .....+.+++.+||+.||++||+++|++++
T Consensus 251 ~~~~~~~~~~-----~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 251 AIIDPNHEIE-----FPD----IPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHCTTSCCC-----CCC----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhcccccC-----Ccc----cchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 2221111100 001 112467889999999999999999999874
No 266
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.6e-36 Score=339.07 Aligned_cols=271 Identities=24% Similarity=0.244 Sum_probs=190.8
Q ss_pred HHHHHhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceecCCc--
Q 002155 673 HILEATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE-- 749 (959)
Q Consensus 673 ~~~~~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-- 749 (959)
......++|++.+.||+|+||.||+|++. +|+.||||++..... ....+.+|++.++.++||||+++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 34556789999999999999999999975 689999998864322 23356678888899999999999999865333
Q ss_pred -----eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-CCcEEE
Q 002155 750 -----KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-EFEAKV 823 (959)
Q Consensus 750 -----~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl 823 (959)
.++||||+++ ++.+.+.........+++..++.++.|++.|+.|||.. +.||+||||||+||+++. ++.+||
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEE
Confidence 7899999986 66555554333345688899999999999999999933 679999999999999996 899999
Q ss_pred cccccccccccccccccccccccccccCCCcCCCCC-CCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 824 ADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGR-STTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
+|||+++...... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... .....+.+.
T Consensus 174 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~~~~~~~~~ 247 (360)
T 3e3p_A 174 CDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA----GQLHEIVRV 247 (360)
T ss_dssp CCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHH
T ss_pred eeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH----HHHHHHHHH
Confidence 9999998765322 223457899999999876554 899999999999999999999999753221 111111111
Q ss_pred hhcC-----------c-cccccCc------cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKG-----------Q-AADVLDP------TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~-----------~-~~~~~~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.... . ....... .............+.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1000 0 0000000 00111122245678899999999999999999999875
No 267
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1e-36 Score=347.95 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=187.8
Q ss_pred CCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEecc
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEYMV 758 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 758 (959)
.|...++||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++..++..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 445568899999999987766689999999986432 34567899999876 89999999999999999999999996
Q ss_pred CCCHHHHHhhhcCCccc---cCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCC-------------CcEE
Q 002155 759 NGSLDLWLRNRTGSLEV---LGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEE-------------FEAK 822 (959)
Q Consensus 759 ~g~L~~~l~~~~~~~~~---l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-------------~~~k 822 (959)
|+|.+++......... ..+..++.++.||+.||+||| +.||+||||||+||+++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 5999999865422111 133356789999999999999 8899999999999999654 4899
Q ss_pred Eccccccccccccccc---ccccccccccccCCCcCCC-------CCCCCcCcchhHHHHHHHHHh-CCCCCCCCCcccc
Q 002155 823 VADFGLARLISACETH---VSTDIAGTFGYIPPEYGQS-------GRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIE 891 (959)
Q Consensus 823 l~Dfg~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~ 891 (959)
|+|||+++........ ......||+.|+|||++.+ ..++.++||||+||++|||++ |..||.......
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~- 247 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE- 247 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-
Confidence 9999999876543221 1224579999999998865 568999999999999999999 999986532210
Q ss_pred CCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 892 GGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
. ........ .+.............+.+++.+||+.||++|||+.|++++
T Consensus 248 -----~---~i~~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 -----S---NIIRGIFS----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp -----H---HHHHTCCC----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -----H---HHhcCCCC----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 1 11111100 0111222345677789999999999999999999999863
No 268
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.3e-36 Score=336.87 Aligned_cols=262 Identities=25% Similarity=0.329 Sum_probs=196.8
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc-hhhHHHHHHHHHHHhcCCCCceeccccceecC-----Cce
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK-TQGHREFTAEMETLGKVKHQNLVPLLGYCSFD-----EEK 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 750 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+.++++++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467889999999999999999875 68899999986433 33445678999999999999999999987654 678
Q ss_pred EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 751 LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 751 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
++||||++ ++|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 5999998763 4889999999999999999999 8899999999999999999999999999998
Q ss_pred cccccccc---------ccccccccccccCCCcCC-CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHH
Q 002155 831 LISACETH---------VSTDIAGTFGYIPPEYGQ-SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVF 900 (959)
Q Consensus 831 ~~~~~~~~---------~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (959)
........ ......||+.|+|||++. +..++.++||||+||++|||++|+.||...... .....+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~ 236 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR----HQLLLIF 236 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHH
Confidence 66432111 122346899999999765 467899999999999999999999999653211 0011111
Q ss_pred HHhhcCccccc------------------cCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 901 QKMKKGQAADV------------------LDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 901 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
........... ................+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 11100000000 00000000001234567899999999999999999999874
No 269
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.1e-36 Score=336.06 Aligned_cols=253 Identities=21% Similarity=0.261 Sum_probs=172.5
Q ss_pred hcCCCCC-CeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccceec----CCceE
Q 002155 678 TNNFCKT-NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCSF----DEEKL 751 (959)
Q Consensus 678 ~~~f~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~ 751 (959)
.++|.+. ++||+|+||.||+|++. +++.||||++..... ...+....++.++||||+++++++.. +...+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 5678885 46999999999999876 689999999864321 12223344566799999999999865 44579
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADFGL 828 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~ 828 (959)
+||||+++|+|.+++..... ..+++.+++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 103 lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 99999999999999986542 35899999999999999999999 889999999999999976 45599999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
++.... .......+|+.|+|||++.+..++.++||||+|+++|||++|..||........ .......+.....
T Consensus 178 ~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~ 250 (336)
T 3fhr_A 178 AKETTQ---NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI----SPGMKRRIRLGQY 250 (336)
T ss_dssp CEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred ceeccc---cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh----hhhHHHhhhcccc
Confidence 976542 222345689999999999888899999999999999999999999965432211 0001111111100
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..+ ..........+.+++.+||+.||++|||++|++++
T Consensus 251 ---~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 251 ---GFP---NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ---CCC---TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ---ccC---chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001 11112234567889999999999999999999974
No 270
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=334.51 Aligned_cols=262 Identities=24% Similarity=0.317 Sum_probs=192.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceecccccee-----------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGYCS----------- 745 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----------- 745 (959)
.++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467889999999999999999976 48999999987766666778899999999999999999998873
Q ss_pred ---cCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC-CCCcE
Q 002155 746 ---FDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN-EEFEA 821 (959)
Q Consensus 746 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~ 821 (959)
.....++||||++ |+|.+++... .+++..++.++.|++.|++||| +.||+||||||+||+++ +++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-----PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-----CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeE
Confidence 3467799999997 5999998653 4788999999999999999999 88999999999999997 56799
Q ss_pred EEcccccccccccccc--cccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHH
Q 002155 822 KVADFGLARLISACET--HVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGW 898 (959)
Q Consensus 822 kl~Dfg~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 898 (959)
||+|||.++....... .......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||...... .....
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----~~~~~ 236 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL----EQMQL 236 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH----HHHHH
Confidence 9999999986543211 11233457899999997655 67899999999999999999999999754221 11111
Q ss_pred HHHHhhcCc----------cc-----cccCccc-cCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 899 VFQKMKKGQ----------AA-----DVLDPTV-LTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 899 ~~~~~~~~~----------~~-----~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
+........ .. ....+.. ...........+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 237 ILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 111000000 00 0000000 000011234568899999999999999999999874
No 271
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4e-36 Score=336.44 Aligned_cols=257 Identities=24% Similarity=0.287 Sum_probs=193.6
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCce----
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEK---- 750 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~---- 750 (959)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467888999999999999999865 68999999987532 33356788999999999999999999999876654
Q ss_pred --EEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 751 --LLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 751 --~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
++||||++ ++|.+++.. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 588877742 3789999999999999999999 78999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQ 907 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (959)
++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....+........
T Consensus 191 a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~i~~~~~~~~ 262 (371)
T 4exu_A 191 ARHADA----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL----DQLTQILKVTGVPG 262 (371)
T ss_dssp C------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCC
T ss_pred cccccc----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHhCCCc
Confidence 976532 2234578999999998876 67899999999999999999999999653211 11111111000000
Q ss_pred cc--ccc-----------CccccCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 908 AA--DVL-----------DPTVLTA----DSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 908 ~~--~~~-----------~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.. ... .+..... ........+.+++.+||+.||++|||++|++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00 000 0000000 011224568899999999999999999999875
No 272
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.9e-36 Score=352.08 Aligned_cols=266 Identities=24% Similarity=0.301 Sum_probs=198.1
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceec------CCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSF------DEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~ 749 (959)
.++|++.++||+|+||.||+|.+. +|+.||||++... .....+.+.+|++++++++||||+++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999875 6899999998754 34445678899999999999999999998755 677
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCc---EEEccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFE---AKVADF 826 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Df 826 (959)
.++||||+++|+|.+++..... ...+++..++.++.|++.|++||| +.||+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEccc
Confidence 8999999999999999987542 235788899999999999999999 789999999999999987764 999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCc-hHHHHHHH-hh
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGN-LVGWVFQK-MK 904 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~-~~~~~~~~-~~ 904 (959)
|.+...... .......||+.|+|||++.+..++.++||||+||++|||++|..||........-.. ........ ..
T Consensus 169 G~a~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 169 GYAKELDQG--ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCCBTTSC--CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred ccccccccc--cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 999876532 223445789999999999999999999999999999999999999965422110000 00000000 00
Q ss_pred ----cCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 002155 905 ----KGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHV 949 (959)
Q Consensus 905 ----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 949 (959)
.+.....................+.+++.+||+.||++|||++|+
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000000000011112344567788999999999999999999884
No 273
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.3e-35 Score=332.00 Aligned_cols=218 Identities=22% Similarity=0.256 Sum_probs=151.7
Q ss_pred cCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCc
Q 002155 313 LGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLV 392 (959)
Q Consensus 313 ~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 392 (959)
+..+++|+.|++++|++++. .+..+++|+.|++++|.+++. ....+|+.|++++|.++.. |.. ..++|+
T Consensus 161 ~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~ 229 (390)
T 3o6n_A 161 FQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELT 229 (390)
T ss_dssp TSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCC
T ss_pred ccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--cccccc
Confidence 33344444444444444432 234456666677777666532 2334677777777777633 322 236777
Q ss_pred EEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCC
Q 002155 393 KLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSN 472 (959)
Q Consensus 393 ~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~ 472 (959)
.|++++|.+++. ..+..+++|++|++++|.+++..|..+..+++|+.|++++|+++++
T Consensus 230 ~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-------------------- 287 (390)
T 3o6n_A 230 ILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-------------------- 287 (390)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEE--------------------
T ss_pred EEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCccc--------------------
Confidence 888888877743 5677778888888888888777777788888888888888877643
Q ss_pred cccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCC
Q 002155 473 NLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVP 552 (959)
Q Consensus 473 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 552 (959)
|..+..+++|++|+|++|+++ .+|..+..+++|++|++++|+|++. + +..+++|+.|++++|++.+...
T Consensus 288 -------~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~ 356 (390)
T 3o6n_A 288 -------NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSL 356 (390)
T ss_dssp -------ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHH
T ss_pred -------CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhH
Confidence 233456788999999999998 6777888899999999999999864 3 6788899999999999987532
Q ss_pred CCcccCCCccccccCCCCCCCCC
Q 002155 553 RSGICQNLSKISLTGNKDLCGKI 575 (959)
Q Consensus 553 ~~~~~~~l~~l~l~~N~~~c~~~ 575 (959)
. ..+..+....+.+++..|.++
T Consensus 357 ~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 357 R-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp H-HHTTTCCTTTBCCCCSCCCTT
T ss_pred H-HHHHHHHhhcccccCceeccc
Confidence 2 335667777788898888754
No 274
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=334.49 Aligned_cols=242 Identities=25% Similarity=0.382 Sum_probs=189.8
Q ss_pred HhcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh------hHHHHHHHHHHHhcC----CCCceecccccee
Q 002155 677 ATNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ------GHREFTAEMETLGKV----KHQNLVPLLGYCS 745 (959)
Q Consensus 677 ~~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~~~~~~~ 745 (959)
..++|++.+.||+|+||.||+|++. +++.||||++...... ....+.+|+.+++++ +||||+++++++.
T Consensus 29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 4578999999999999999999874 6889999998654321 122355789988888 8999999999999
Q ss_pred cCCceEEEEEe-ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC-CCCcEEE
Q 002155 746 FDEEKLLVYEY-MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN-EEFEAKV 823 (959)
Q Consensus 746 ~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl 823 (959)
..+..++|||| +.+++|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++ .++.+||
T Consensus 109 ~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 109 TQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEE
T ss_pred cCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEE
Confidence 99999999999 78999999998754 5889999999999999999999 78999999999999998 8899999
Q ss_pred cccccccccccccccccccccccccccCCCcCCCCCCC-CcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHH
Q 002155 824 ADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRST-TRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQK 902 (959)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (959)
+|||.+...... ......|+..|+|||++.+..+. .++||||+|+++|||++|+.||.... ..
T Consensus 182 ~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------------~~ 245 (312)
T 2iwi_A 182 IDFGSGALLHDE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------------EI 245 (312)
T ss_dssp CCCSSCEECCSS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------HH
T ss_pred EEcchhhhcccC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------------HH
Confidence 999999876432 22345689999999988766664 58999999999999999999985420 01
Q ss_pred hhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 903 MKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... .. .. .......+.+++.+||+.||++|||++|++++
T Consensus 246 ~~~-~~------~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 246 LEA-EL------HF----PAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HHT-CC------CC----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred hhh-cc------CC----cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 00 00 11123467889999999999999999999874
No 275
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=341.19 Aligned_cols=250 Identities=23% Similarity=0.361 Sum_probs=186.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEEEe
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVYEY 756 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 756 (959)
..+|...++||+|+||+||.....+++.||||++...... .+.+|+++++++ +||||+++++++.++...|+||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 4568888999999999966555557999999998653322 246799999999 799999999999999999999999
Q ss_pred ccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC-----CCcEEEcccccccc
Q 002155 757 MVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE-----EFEAKVADFGLARL 831 (959)
Q Consensus 757 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfg~~~~ 831 (959)
++ |+|.+++..... ...+.+++.++.||++||+||| +.||+||||||+||+++. ..++||+|||+++.
T Consensus 100 ~~-g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 100 CA-ATLQEYVEQKDF---AHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CS-EEHHHHHHSSSC---CCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CC-CCHHHHHHhcCC---CccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 96 599999986542 2334456789999999999999 889999999999999953 24688999999987
Q ss_pred cccccc--cccccccccccccCCCcCC---CCCCCCcCcchhHHHHHHHHHh-CCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 832 ISACET--HVSTDIAGTFGYIPPEYGQ---SGRSTTRGDVYSFGVILLELVT-GKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 832 ~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
...... .......||+.|+|||++. ...++.++||||+||++|||++ |..||+..... .. .....
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--------~~-~~~~~ 243 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--------QA-NILLG 243 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--------HH-HHHTT
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--------HH-HHHhc
Confidence 643221 2233457999999999987 4567889999999999999999 88998543221 11 11111
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
...... ..........+.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 244 ACSLDC------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp CCCCTT------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cCCccc------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 111111 11122344557889999999999999999999853
No 276
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.2e-36 Score=337.55 Aligned_cols=264 Identities=20% Similarity=0.220 Sum_probs=198.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-----------CCceecccccee
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-----------HQNLVPLLGYCS 745 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~ 745 (959)
.++|++.+.||+|+||.||+|++. +++.||||++.... ...+.+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 357889999999999999999864 68999999987432 33456788999988886 899999999987
Q ss_pred cCC----ceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEEC----
Q 002155 746 FDE----EKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLN---- 816 (959)
Q Consensus 746 ~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~---- 816 (959)
..+ ..++||||+ +++|.+++..... ..+++..++.++.||+.||+||| +. ||+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEET
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCC
Confidence 644 789999999 8899999987442 34889999999999999999999 76 999999999999994
Q ss_pred --CCCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCC-
Q 002155 817 --EEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGG- 893 (959)
Q Consensus 817 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~- 893 (959)
..+.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..........
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4458999999999765422 234478999999999999999999999999999999999999997543211100
Q ss_pred -chHHHHHHHhhcCc------------------cccccCc----------cccCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 002155 894 -NLVGWVFQKMKKGQ------------------AADVLDP----------TVLTADSKPMMLKMLRIAGDCLSDNPAMRP 944 (959)
Q Consensus 894 -~~~~~~~~~~~~~~------------------~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 944 (959)
.....+........ ....... .............+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 00111111110000 0000000 001123466778899999999999999999
Q ss_pred CHHHHHHH
Q 002155 945 TMLHVLKF 952 (959)
Q Consensus 945 s~~ell~~ 952 (959)
|++|++++
T Consensus 327 t~~ell~h 334 (373)
T 1q8y_A 327 DAGGLVNH 334 (373)
T ss_dssp CHHHHHTC
T ss_pred CHHHHhhC
Confidence 99999874
No 277
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=330.83 Aligned_cols=256 Identities=24% Similarity=0.278 Sum_probs=193.5
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc--hhhHHHHHHHHHHHhcCCCCceeccccceecCCc-----
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE----- 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 749 (959)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357888999999999999999875 68999999986532 3334668899999999999999999999877654
Q ss_pred -eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccc
Q 002155 750 -KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGL 828 (959)
Q Consensus 750 -~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 828 (959)
.++||||++ ++|.+++.. .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 588777642 3788999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccccccccccccccCCCcCCC-CCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcC-
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQS-GRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKG- 906 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 906 (959)
++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....+.......
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----~~~~~i~~~~~~~~ 244 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL----DQLTQILKVTGVPG 244 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH----HHHHHHHHHHCBCC
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCC
Confidence 9765321 234578999999998776 67899999999999999999999998653211 1111111100000
Q ss_pred -----------------ccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 907 -----------------QAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 907 -----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
.......+ ............+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 245 TEFVQKLNDKAAKSYIQSLPQTPRK-DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHTTCSCHHHHHHHHTSCBCSSC-CTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHhhHHHHHHHHhCcCCCCc-cHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000000 0011112334578899999999999999999999864
No 278
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.9e-36 Score=331.95 Aligned_cols=241 Identities=26% Similarity=0.403 Sum_probs=196.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccchh------hHHHHHHHHHHHhcCC--CCceeccccceecCC
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQ------GHREFTAEMETLGKVK--HQNLVPLLGYCSFDE 748 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~ 748 (959)
.++|++.+.||+|+||.||+|++. +++.||||++...... ....+.+|+.++++++ ||||+++++++..++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 467999999999999999999864 6889999998654321 2234667999999996 599999999999999
Q ss_pred ceEEEEEeccC-CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC-CCCcEEEccc
Q 002155 749 EKLLVYEYMVN-GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN-EEFEAKVADF 826 (959)
Q Consensus 749 ~~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Df 826 (959)
..++||||+.+ ++|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++ .++.+||+||
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cEEEEEEcCCCCccHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99999999986 89999998754 5889999999999999999999 88999999999999998 7789999999
Q ss_pred ccccccccccccccccccccccccCCCcCCCCCC-CCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhc
Q 002155 827 GLARLISACETHVSTDIAGTFGYIPPEYGQSGRS-TTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKK 905 (959)
Q Consensus 827 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (959)
|+++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ....
T Consensus 195 g~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------------~~~~- 257 (320)
T 3a99_A 195 GSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------------EIIR- 257 (320)
T ss_dssp TTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------HHHH-
T ss_pred ccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------------hhhc-
Confidence 999876432 2234578999999998876665 678999999999999999999985421 0111
Q ss_pred CccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 906 GQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... .. + . .....+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~--~~-~---~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 258 GQV--FF-R---Q----RVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CCC--CC-S---S----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccc--cc-c---c----cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 100 00 0 1 122467889999999999999999999874
No 279
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.9e-35 Score=329.86 Aligned_cols=260 Identities=22% Similarity=0.276 Sum_probs=198.4
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CC-CEEEEEEccccchhhHHHHHHHHHHHhcCCCCc------eeccccceecCCc
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DG-KTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN------LVPLLGYCSFDEE 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~ 749 (959)
.++|++.+.||+|+||.||+|++. ++ +.||+|++... ....+.+.+|+.+++.++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 367889999999999999999875 34 68999998753 233566788999999997665 8889999999999
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEE--------------
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILL-------------- 815 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill-------------- 815 (959)
.++||||+ ++++.+++..... ..+++.+++.++.|++.||+||| +.||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred EEEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccc
Confidence 99999999 6677777765432 35889999999999999999999 8999999999999999
Q ss_pred -----CCCCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccc
Q 002155 816 -----NEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDI 890 (959)
Q Consensus 816 -----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 890 (959)
+.++.+||+|||.++.... ......||+.|+|||++.+..++.++||||+||++|||++|..||......
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~- 245 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHE----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR- 245 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTS----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-
T ss_pred ccccccCCCcEEEeecCccccccc----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 5678999999999976432 223457899999999999999999999999999999999999999753221
Q ss_pred cCCchHHHHHHHhhcCc--------cccc-c--------------------Cc-cccCCCCHHHHHHHHHHHHHcccCCC
Q 002155 891 EGGNLVGWVFQKMKKGQ--------AADV-L--------------------DP-TVLTADSKPMMLKMLRIAGDCLSDNP 940 (959)
Q Consensus 891 ~~~~~~~~~~~~~~~~~--------~~~~-~--------------------~~-~~~~~~~~~~~~~l~~li~~cl~~dP 940 (959)
.....+........ .... . .+ .............+.+++.+||+.||
T Consensus 246 ---~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 322 (355)
T 2eu9_A 246 ---EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322 (355)
T ss_dssp ---HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred ---HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence 11111111100000 0000 0 00 00011123345678899999999999
Q ss_pred CCCCCHHHHHHH
Q 002155 941 AMRPTMLHVLKF 952 (959)
Q Consensus 941 ~~Rps~~ell~~ 952 (959)
++|||++|++++
T Consensus 323 ~~Rpt~~e~l~h 334 (355)
T 2eu9_A 323 AQRITLAEALLH 334 (355)
T ss_dssp TTSCCHHHHTTS
T ss_pred hhCcCHHHHhcC
Confidence 999999999854
No 280
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=326.44 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=179.7
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccch--hhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT--QGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++..... ...+.+.++..+++.++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888999999999999999975 689999999865432 22233445566788889999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTP-HIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
||+ ++.+..+..... ..+++..++.++.|++.|++||| +. |++||||||+||+++.++.+||+|||.+....
T Consensus 104 e~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ---GPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 556666555433 35889999999999999999999 64 99999999999999999999999999997654
Q ss_pred cccccccccccccccccCCCcCC-----CCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 834 ACETHVSTDIAGTFGYIPPEYGQ-----SGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
... ......+++.|+|||++. ...++.++||||+|+++|||++|+.||...... ......... ...
T Consensus 177 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~-~~~ 247 (318)
T 2dyl_A 177 DDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD------FEVLTKVLQ-EEP 247 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHHHHH-SCC
T ss_pred CCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc------HHHHHHHhc-cCC
Confidence 321 223446899999999874 556889999999999999999999998643221 111112211 111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
... + ........+.+++.+||+.||++||+++|++++
T Consensus 248 ~~~--~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 248 PLL--P-----GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CCC--C-----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CCC--C-----ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 110 0 011123467889999999999999999999864
No 281
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-34 Score=345.46 Aligned_cols=333 Identities=21% Similarity=0.246 Sum_probs=220.1
Q ss_pred cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEcc
Q 002155 138 PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLN 217 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 217 (959)
.++.|++++|.+..+.+..+..+++|+.|++++|.+++..|..|+.+++|++|+|++|.|++..|..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 35566666666665555555556666666666666665555566666666666666666665555556666666666666
Q ss_pred CCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccc
Q 002155 218 SNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGV 297 (959)
Q Consensus 218 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~ 297 (959)
+|.|+.+++..|+++++|++|+|++|.+++..|..|+.+++|+.|+|++|.++
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--------------------------- 184 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT--------------------------- 184 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS---------------------------
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC---------------------------
Confidence 66666544444566666666666666666555555666666666666665553
Q ss_pred eecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCccc
Q 002155 298 FDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQL 377 (959)
Q Consensus 298 l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 377 (959)
+.. +..+++|+.|++++|.+++ +....+|+.|++++|.+
T Consensus 185 ---------------------------------~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l 223 (597)
T 3oja_B 185 ---------------------------------HVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSI 223 (597)
T ss_dssp ---------------------------------BCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCC
T ss_pred ---------------------------------CcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcc
Confidence 211 2234455555555555542 12233566666666665
Q ss_pred CCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccc
Q 002155 378 TGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELF 457 (959)
Q Consensus 378 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 457 (959)
+...+ .+ .++|+.|+|++|.+++ +..+..+++|++|+|++|.+++..|..|..+++|+.|+|++|+++++
T Consensus 224 ~~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l----- 293 (597)
T 3oja_B 224 NVVRG-PV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL----- 293 (597)
T ss_dssp CEEEC-SC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEE-----
T ss_pred ccccc-cc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCC-----
Confidence 53222 21 2467777777777774 36677788888888888888877778888888888888888887743
Q ss_pred cchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCc
Q 002155 458 SNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNL 537 (959)
Q Consensus 458 ~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 537 (959)
|..+..+++|+.|+|++|.++ .+|..+..+++|++|+|++|+|++. | +..+++|
T Consensus 294 ----------------------~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L 347 (597)
T 3oja_B 294 ----------------------NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTL 347 (597)
T ss_dssp ----------------------ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCC
T ss_pred ----------------------CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCC
Confidence 233445788999999999998 6888888899999999999999865 3 6778899
Q ss_pred cEEecccCcCcccCCCCcccCCCccccccCCCCCCCCC
Q 002155 538 LYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKI 575 (959)
Q Consensus 538 ~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~~ 575 (959)
+.|++++|++.+.... ..+..+....+.+++..|+.+
T Consensus 348 ~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 348 KNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp SEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 9999999999876432 234566677788999999864
No 282
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-34 Score=324.66 Aligned_cols=311 Identities=22% Similarity=0.232 Sum_probs=227.3
Q ss_pred CcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeE
Q 002155 184 AAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLV 263 (959)
Q Consensus 184 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 263 (959)
+++++.|++++|.++...+..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|++++..|..|+.+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46667777777777654444566677777777777777766666677777777777777777766666677777777777
Q ss_pred cccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCC
Q 002155 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNL 343 (959)
Q Consensus 264 Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L 343 (959)
|++|+++. ..+..+..+++|+.|++++|++++..+..|..+++|
T Consensus 124 L~~n~l~~------------------------------------l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 167 (390)
T 3o6n_A 124 LERNDLSS------------------------------------LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSL 167 (390)
T ss_dssp CCSSCCCC------------------------------------CCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTC
T ss_pred CCCCccCc------------------------------------CCHHHhcCCCCCcEEECCCCccCccChhhccCCCCC
Confidence 77666541 112224555666666666666666677778888888
Q ss_pred CEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCc
Q 002155 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423 (959)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 423 (959)
++|++++|++++. .+..+++|+.|++++|.+++ +...++|++|++++|.+... |..+ .++|++|++++|
T Consensus 168 ~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~~--~~~L~~L~l~~n 236 (390)
T 3o6n_A 168 QNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHN 236 (390)
T ss_dssp CEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECCC--CSSCCEEECCSS
T ss_pred CEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-cccc--cccccEEECCCC
Confidence 8888888888754 24566778888888887763 23445777888888877743 3222 356777777777
Q ss_pred cccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccC
Q 002155 424 ELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEI 503 (959)
Q Consensus 424 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 503 (959)
.+++. ..+..+++|+.|++++|++++ ..|..|..+++|+.|+|++|+++ .+
T Consensus 237 ~l~~~--~~l~~l~~L~~L~Ls~n~l~~--------------------------~~~~~~~~l~~L~~L~L~~n~l~-~~ 287 (390)
T 3o6n_A 237 NLTDT--AWLLNYPGLVEVDLSYNELEK--------------------------IMYHPFVKMQRLERLYISNNRLV-AL 287 (390)
T ss_dssp CCCCC--GGGGGCTTCSEEECCSSCCCE--------------------------EESGGGTTCSSCCEEECCSSCCC-EE
T ss_pred CCccc--HHHcCCCCccEEECCCCcCCC--------------------------cChhHccccccCCEEECCCCcCc-cc
Confidence 77642 456666777777766666653 45667778999999999999999 56
Q ss_pred CcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCCC
Q 002155 504 PPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCG 573 (959)
Q Consensus 504 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~ 573 (959)
|..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++++ ...+++|+.+++.+|+|.|+
T Consensus 288 ~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 288 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHH
T ss_pred CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccch
Confidence 777889999999999999998 57778899999999999999999875 45678999999999999885
No 283
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=9.2e-35 Score=312.35 Aligned_cols=231 Identities=12% Similarity=0.113 Sum_probs=181.9
Q ss_pred cCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEEE
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 754 (959)
++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+..+++++||||+++++++..++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999976 48999999997543 233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||++|++|.++++.. ....++.+++.|++.||+||| +.||+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 999999999999542 244578889999999999999 8899999999999999999999998543
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCc
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDP 914 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (959)
|++ +++.++|||||||++|||++|+.||........-... ..........+
T Consensus 175 --------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--------~~~~~~~~~~~ 225 (286)
T 3uqc_A 175 --------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA--------ERDTAGQPIEP 225 (286)
T ss_dssp --------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC--------CBCTTSCBCCH
T ss_pred --------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH--------HHHhccCCCCh
Confidence 333 3688999999999999999999999764322100000 00000000000
Q ss_pred cccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhc
Q 002155 915 TVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKFLKEIKV 958 (959)
Q Consensus 915 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 958 (959)
.. ........+.+++.+||+.||++| |++|+++.|+++..
T Consensus 226 ~~---~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 226 AD---IDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp HH---HCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred hh---cccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 00 011233468899999999999999 99999999998753
No 284
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.1e-33 Score=312.06 Aligned_cols=306 Identities=25% Similarity=0.340 Sum_probs=191.4
Q ss_pred ccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCE
Q 002155 158 WNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTT 237 (959)
Q Consensus 158 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 237 (959)
..+++|++|++++|.+. .++ .+..+++|++|++++|.+++. +. +..+++|++|++++|.++. + ..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCE
Confidence 34555666666666555 233 255666666666666666632 22 6666666666666666653 2 24666666666
Q ss_pred EEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcc
Q 002155 238 LDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCV 317 (959)
Q Consensus 238 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~ 317 (959)
|++++|++++..+ +..+++|+.|++++|... .. +..+..++
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~------------------------------------~~-~~~~~~l~ 155 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNL------------------------------------SD-LSPLSNMT 155 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTC------------------------------------CC-CGGGTTCT
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCc------------------------------------cc-ccchhhCC
Confidence 6666666664422 566666666666665432 11 12245555
Q ss_pred cccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEcc
Q 002155 318 VVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLT 397 (959)
Q Consensus 318 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 397 (959)
+|+.|++++|.+++..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|+++
T Consensus 156 ~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~ 229 (347)
T 4fmz_A 156 GLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIG 229 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECC
T ss_pred CCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEcc
Confidence 66666666666654433 6667777777777777764433 6666777777777777764433 6667777777777
Q ss_pred CCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCC
Q 002155 398 GNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDG 477 (959)
Q Consensus 398 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~ 477 (959)
+|++++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|+++++
T Consensus 230 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~------------------------- 280 (347)
T 4fmz_A 230 NNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI------------------------- 280 (347)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-------------------------
T ss_pred CCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-------------------------
Confidence 777764433 66677777777777777642 3566667777777777666543
Q ss_pred CCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCc
Q 002155 478 GLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLE 548 (959)
Q Consensus 478 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 548 (959)
..+..+++|+.|++++|++++..|..++.+++|++|++++|++++..| +..+++|++|++++|+++
T Consensus 281 ---~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 281 ---SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ---GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ---hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 124456777888888888877777777778888888888888876555 777788888888888765
No 285
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=9.2e-34 Score=337.83 Aligned_cols=312 Identities=21% Similarity=0.224 Sum_probs=228.3
Q ss_pred CcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeE
Q 002155 184 AAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLV 263 (959)
Q Consensus 184 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 263 (959)
+.+++.|++++|.+....+..|.++++|++|+|++|.|+++.|..|+.+++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45666666666666655555566666777777777777666666666777777777777777666666666666676666
Q ss_pred cccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCC
Q 002155 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNL 343 (959)
Q Consensus 264 Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L 343 (959)
|++|.+++ ..+..|+.+++|+.|++++|.+++..|..|..+++|
T Consensus 130 L~~n~l~~------------------------------------l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 173 (597)
T 3oja_B 130 LERNDLSS------------------------------------LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSL 173 (597)
T ss_dssp CCSSCCCC------------------------------------CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTC
T ss_pred eeCCCCCC------------------------------------CCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcC
Confidence 66665541 222334555666666666666666677778888888
Q ss_pred CEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCc
Q 002155 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423 (959)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 423 (959)
++|++++|.+++.. +..+++|+.|++++|.+++ +...++|+.|++++|.+....+. + .++|+.|+|++|
T Consensus 174 ~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n 242 (597)
T 3oja_B 174 QNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHN 242 (597)
T ss_dssp CEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSS
T ss_pred cEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCC
Confidence 88888888887642 4556778888888887763 34456788888888887743322 2 246777777777
Q ss_pred cccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccC
Q 002155 424 ELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEI 503 (959)
Q Consensus 424 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 503 (959)
.+++ +..+..+++|+.|+|++|.+++ ..|..|+.+++|+.|+|++|++++ +
T Consensus 243 ~l~~--~~~l~~l~~L~~L~Ls~N~l~~--------------------------~~~~~~~~l~~L~~L~Ls~N~l~~-l 293 (597)
T 3oja_B 243 NLTD--TAWLLNYPGLVEVDLSYNELEK--------------------------IMYHPFVKMQRLERLYISNNRLVA-L 293 (597)
T ss_dssp CCCC--CGGGGGCTTCSEEECCSSCCCE--------------------------EESGGGTTCSSCCEEECTTSCCCE-E
T ss_pred CCCC--ChhhccCCCCCEEECCCCccCC--------------------------CCHHHhcCccCCCEEECCCCCCCC-C
Confidence 7764 3566677777777777666654 456677789999999999999995 6
Q ss_pred CcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCCCC
Q 002155 504 PPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 504 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~ 574 (959)
|..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|++.+++ ...++.|+.+++++|+|.|++
T Consensus 294 ~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 294 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHH
T ss_pred CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCChh
Confidence 888888999999999999999 57888999999999999999999885 445789999999999999975
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.2e-33 Score=309.63 Aligned_cols=306 Identities=23% Similarity=0.336 Sum_probs=149.5
Q ss_pred cCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCc
Q 002155 38 LGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLS 117 (959)
Q Consensus 38 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 117 (959)
+..++.|++|++++|++. .+|. +..+++|++|+|++|++++ +|. +..+++|++|++++|.+++. ..|.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCC
Confidence 345666777777777765 4443 6677777777777777763 333 66777777777777776643 2466666666
Q ss_pred eeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcc
Q 002155 118 QLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNML 197 (959)
Q Consensus 118 ~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 197 (959)
+|++++|.+.+..+ +..+++|++|++++|..... +..+..+++|++|++++|.+
T Consensus 114 ~L~l~~n~i~~~~~-------------------------~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~ 167 (347)
T 4fmz_A 114 ELYLNEDNISDISP-------------------------LANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESKV 167 (347)
T ss_dssp EEECTTSCCCCCGG-------------------------GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCCEEECCSSCC
T ss_pred EEECcCCcccCchh-------------------------hccCCceeEEECCCCCCccc-ccchhhCCCCcEEEecCCCc
Confidence 66666655543221 22333333333333322211 11244445555555555554
Q ss_pred cccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCC
Q 002155 198 KGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKP 277 (959)
Q Consensus 198 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 277 (959)
.+..+ +..+++|++|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|++|++++|.+++
T Consensus 168 ~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~------ 235 (347)
T 4fmz_A 168 KDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD------ 235 (347)
T ss_dssp CCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC------
T ss_pred CCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC------
Confidence 43221 4445555555555555543222 4444555555555555543322 4444455555544444431
Q ss_pred cchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCC
Q 002155 278 SSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPI 357 (959)
Q Consensus 278 ~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 357 (959)
. +. +..+++|+.|++++|.+++. ..+..+++|++|++++|++++.
T Consensus 236 ------------------------------~-~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~- 280 (347)
T 4fmz_A 236 ------------------------------L-SP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI- 280 (347)
T ss_dssp ------------------------------C-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-
T ss_pred ------------------------------C-cc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-
Confidence 1 11 23333333444444443322 2344455555555555555532
Q ss_pred CCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccc
Q 002155 358 PSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNEL 425 (959)
Q Consensus 358 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 425 (959)
..+..+++|+.|++++|++++..+..+..+++|++|++++|++++..| +..+++|++|++++|.|
T Consensus 281 -~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 281 -SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp -GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred -hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 234444455555555555544444444445555555555555443332 44444444444444444
No 287
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.4e-35 Score=351.51 Aligned_cols=239 Identities=23% Similarity=0.327 Sum_probs=191.9
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC--CCCEEEEEEcccc-chhhHHHHHHHHHHHhcCCCCceeccccceecCCc-----
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP--DGKTVAVKKLSQA-KTQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEE----- 749 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 749 (959)
.++|++.+.||+|+||.||+|++. +|+.||||++... .......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999875 5899999998643 33445678899999999999999999999987665
Q ss_pred eEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccc
Q 002155 750 KLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLA 829 (959)
Q Consensus 750 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 829 (959)
.|+||||+++++|.+++.. .+++.+++.++.||++||+||| +.||+||||||+||+++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccc
Confidence 6999999999999887754 4889999999999999999999 8899999999999999986 9999999999
Q ss_pred cccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccc
Q 002155 830 RLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAA 909 (959)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (959)
+..... ....||+.|+|||++.+. ++.++|||||||++|||++|.+||........
T Consensus 229 ~~~~~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~------------------ 284 (681)
T 2pzi_A 229 SRINSF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL------------------ 284 (681)
T ss_dssp EETTCC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC------------------
T ss_pred hhcccC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc------------------
Confidence 865432 345799999999987655 48899999999999999999988754221100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHHhh
Q 002155 910 DVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPT-MLHVLKFLKEI 956 (959)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~ell~~L~~l 956 (959)
+ ...........+.+++.+||+.||++||+ ++++.+.+.++
T Consensus 285 ----~--~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 285 ----P--EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp ----C--TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ----c--ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0 00001123356889999999999999995 66666666554
No 288
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3e-34 Score=312.89 Aligned_cols=259 Identities=29% Similarity=0.477 Sum_probs=227.3
Q ss_pred ccccEEEccCCcCcc--cCCccccCCCCCCEEEccC-CCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcE
Q 002155 317 VVVVDLLLNNNMLSG--KIPGSLSRLTNLTTLDLSR-NQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVK 393 (959)
Q Consensus 317 ~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 393 (959)
..++.|++++|.+++ .+|..|.++++|++|++++ |.+.+..|..|..+++|++|++++|.+++..|..+..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 467788888888887 7788888888888888884 8888788888888888888888888888888888888888888
Q ss_pred EEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhccc-ccceEeeccccccCCccccccchhhhhhceeccCC
Q 002155 394 LNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSN 472 (959)
Q Consensus 394 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~ 472 (959)
|++++|.+++..|..|..+++|++|++++|++++.+|..+..++ +|+.|++++|++++..+..|... .++.|++++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l---~L~~L~Ls~ 206 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL---NLAFVDLSR 206 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC---CCSEEECCS
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC---cccEEECcC
Confidence 88888888888888888888888888888888888888888887 88888888888887766666654 388889999
Q ss_pred cccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCC
Q 002155 473 NLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVP 552 (959)
Q Consensus 473 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 552 (959)
|.+++..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|++|++++|++++.+|
T Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred CcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 999888999999999999999999999966655 8899999999999999999999999999999999999999999999
Q ss_pred CCcccCCCccccccCCCCCCCCCCCCCc
Q 002155 553 RSGICQNLSKISLTGNKDLCGKIIGSNC 580 (959)
Q Consensus 553 ~~~~~~~l~~l~l~~N~~~c~~~~~~~c 580 (959)
....+++|+.+++.+|+++||.|+. .|
T Consensus 286 ~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 286 QGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp CSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CCccccccChHHhcCCCCccCCCCC-CC
Confidence 8888999999999999999998776 46
No 289
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-34 Score=329.06 Aligned_cols=244 Identities=14% Similarity=0.131 Sum_probs=181.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcC-CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCC-Cceeccccc---------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKH-QNLVPLLGY--------- 743 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~niv~~~~~--------- 743 (959)
+.+|...++||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.+++.++| ++......+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 345777889999999999999954 69999999987332 2235678899999999987 322211111
Q ss_pred ------------eec-----CCceEEEEEeccCCCHHHHHhhh---cCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002155 744 ------------CSF-----DEEKLLVYEYMVNGSLDLWLRNR---TGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHI 803 (959)
Q Consensus 744 ------------~~~-----~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 803 (959)
+.. ....+++|+++ +++|.++++.. ......+++..++.++.|+++||+||| +.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 111 12356777765 67999988532 222346788899999999999999999 8899
Q ss_pred EeCCCCCCCEEECCCCcEEEcccccccccccccccccccccccccccCCCcC----------CCCCCCCcCcchhHHHHH
Q 002155 804 IHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYG----------QSGRSTTRGDVYSFGVIL 873 (959)
Q Consensus 804 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwslG~il 873 (959)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99999999999999999999999998765432 334567 999999988 666688999999999999
Q ss_pred HHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 874 LELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 874 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
|||++|+.||........ .. .+ +.. .. .....+.+++.+||+.||++||++.+++++
T Consensus 308 ~elltg~~Pf~~~~~~~~----~~----~~--------~~~--~~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG----SE----WI--------FRS--CK----NIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC----SG----GG--------GSS--CC----CCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHCCCCCCCcchhhh----HH----HH--------Hhh--cc----cCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 999999999965422110 00 00 000 00 122468899999999999999998888654
No 290
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.7e-34 Score=310.74 Aligned_cols=231 Identities=20% Similarity=0.276 Sum_probs=176.5
Q ss_pred cCCCCC-CeeccCCCeEEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHH-hcCCCCceeccccceec----CCceE
Q 002155 679 NNFCKT-NIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETL-GKVKHQNLVPLLGYCSF----DEEKL 751 (959)
Q Consensus 679 ~~f~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~~~~~ 751 (959)
++|.+. ++||+|+||.||+|... +++.||+|++... ..+.+|+.++ +..+||||+++++++.. +...+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456666 78999999999999874 6899999998642 3466788877 56689999999999876 66789
Q ss_pred EEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECC---CCcEEEccccc
Q 002155 752 LVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNE---EFEAKVADFGL 828 (959)
Q Consensus 752 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~ 828 (959)
+||||+++|+|.+++..... ..+++..++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 92 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 99999999999999987542 35889999999999999999999 889999999999999998 78999999999
Q ss_pred ccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCcc
Q 002155 829 ARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQA 908 (959)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (959)
+.... +..++.++||||+||++|||++|+.||.......... .......
T Consensus 167 a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~--------~~~~~~~ 215 (299)
T 3m2w_A 167 AKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--------GMKTRIR 215 (299)
T ss_dssp CEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C--------CSCCSSC
T ss_pred ccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH--------HHHHHHh
Confidence 86432 1346778999999999999999999996532211000 0000000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 002155 909 ADVLDPTVLTADSKPMMLKMLRIAGDCLSDNPAMRPTMLHVLKF 952 (959)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 952 (959)
..... ............+.+++.+||+.||++|||++|++++
T Consensus 216 ~~~~~--~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 216 MGQYE--FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp TTCCS--SCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hcccc--CCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000 0000001234568889999999999999999999874
No 291
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1e-32 Score=304.19 Aligned_cols=300 Identities=23% Similarity=0.265 Sum_probs=196.8
Q ss_pred ccCCCcccCCC------ccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccc
Q 002155 31 SGSLPSWLGNW------NQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTG 104 (959)
Q Consensus 31 ~~~lp~~~~~l------~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 104 (959)
.+.+|..++.. .+++.++++++++. .+|..+. ++|++|+|++|++++..|..|.++++|++|++++|++++
T Consensus 16 l~~lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 92 (332)
T 2ft3_A 16 LDSLPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK 92 (332)
T ss_dssp ---------CCCCSSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred cccCCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCc
Confidence 34566655443 36889999999887 7787664 689999999999987777889999999999999999998
Q ss_pred cCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEcccccccc--ccCcccc
Q 002155 105 TIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG--SLPYEVG 182 (959)
Q Consensus 105 ~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~--~~~~~~~ 182 (959)
..+..|.++++|++|++++|.+... |..+. .+|++|++++|++++..+..+..+++|++|++++|.++. ..+..|.
T Consensus 93 ~~~~~~~~l~~L~~L~L~~n~l~~l-~~~~~-~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 170 (332)
T 2ft3_A 93 IHEKAFSPLRKLQKLYISKNHLVEI-PPNLP-SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFD 170 (332)
T ss_dssp ECGGGSTTCTTCCEEECCSSCCCSC-CSSCC-TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSC
T ss_pred cCHhHhhCcCCCCEEECCCCcCCcc-Ccccc-ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCccccc
Confidence 8888899999999999999988743 43333 467888888888876666667777777777777777652 4555666
Q ss_pred CCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCee
Q 002155 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCL 262 (959)
Q Consensus 183 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 262 (959)
.+ +|++|++++|.+++ +|..+. ++|++|++++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|
T Consensus 171 ~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 246 (332)
T 2ft3_A 171 GL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLREL 246 (332)
T ss_dssp SC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEE
T ss_pred CC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEE
Confidence 66 66666666666663 444433 466666666666665555666666666666666666665555556666666666
Q ss_pred EcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCC
Q 002155 263 VLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTN 342 (959)
Q Consensus 263 ~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~ 342 (959)
+|++|+++ .+|..+..+++
T Consensus 247 ~L~~N~l~-------------------------------------------------------------~lp~~l~~l~~ 265 (332)
T 2ft3_A 247 HLDNNKLS-------------------------------------------------------------RVPAGLPDLKL 265 (332)
T ss_dssp ECCSSCCC-------------------------------------------------------------BCCTTGGGCTT
T ss_pred ECCCCcCe-------------------------------------------------------------ecChhhhcCcc
Confidence 66665543 23334455555
Q ss_pred CCEEEccCCCCCCCCCCCcCC------CCcceEEEeeCcccC--CccccccccCCCCcEEEccCCc
Q 002155 343 LTTLDLSRNQLTGPIPSEFGD------SIKLQGLYLGNNQLT--GSIPWSLGSLGGLVKLNLTGNK 400 (959)
Q Consensus 343 L~~L~Ls~n~l~~~~~~~~~~------l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~N~ 400 (959)
|++|++++|+++...+..|.. ...|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 266 L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 266 LQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 555555555555554444443 245666677776665 4556666777777777776664
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2e-32 Score=301.84 Aligned_cols=289 Identities=27% Similarity=0.327 Sum_probs=187.2
Q ss_pred cCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEc
Q 002155 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVL 264 (959)
Q Consensus 185 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 264 (959)
.+++.+++++|.++ .+|..+. ++|++|+|++|.|+++.|..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 36788888888887 5666653 57888888888888777778888888888888888888887888888888888888
Q ss_pred ccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCC
Q 002155 265 SHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLT 344 (959)
Q Consensus 265 s~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 344 (959)
++|+++. + |..+. ++|++|++++|+++...+..|..+++|+
T Consensus 110 ~~n~l~~-l------------------------------------~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~ 150 (332)
T 2ft3_A 110 SKNHLVE-I------------------------------------PPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMN 150 (332)
T ss_dssp CSSCCCS-C------------------------------------CSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCC
T ss_pred CCCcCCc-c------------------------------------Ccccc--ccCCEEECCCCccCccCHhHhCCCccCC
Confidence 8887751 1 11111 3455555555555555555566666666
Q ss_pred EEEccCCCCCC--CCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC
Q 002155 345 TLDLSRNQLTG--PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF 422 (959)
Q Consensus 345 ~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 422 (959)
+|++++|.++. ..+..|..+ +|+.|++++|++++ +|..+. ++|++|++++|++++..+..|.++++|++|++++
T Consensus 151 ~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~ 226 (332)
T 2ft3_A 151 CIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGH 226 (332)
T ss_dssp EEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCS
T ss_pred EEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 66666666642 455555555 66666666666663 333332 4666666666666655556666666666666666
Q ss_pred ccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeecccccccc
Q 002155 423 NELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGE 502 (959)
Q Consensus 423 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 502 (959)
|++++..+..+..+++|+.|++++|+++. +|..+..+++|+.|++++|++++.
T Consensus 227 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~---------------------------lp~~l~~l~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 227 NQIRMIENGSLSFLPTLRELHLDNNKLSR---------------------------VPAGLPDLKLLQVVYLHTNNITKV 279 (332)
T ss_dssp SCCCCCCTTGGGGCTTCCEEECCSSCCCB---------------------------CCTTGGGCTTCCEEECCSSCCCBC
T ss_pred CcCCcCChhHhhCCCCCCEEECCCCcCee---------------------------cChhhhcCccCCEEECCCCCCCcc
Confidence 66665555566666666666666665552 334455566666666666666655
Q ss_pred CCcCCcC------CCCCcEEeCCCCcCC--CCCCccccCCCCccEEecccCc
Q 002155 503 IPPDLGN------LMQLEYLDVSRNRLC--GQIPETMCSLSNLLYLSLAENR 546 (959)
Q Consensus 503 ~p~~~~~------l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~l~~N~ 546 (959)
.+..|.. ...|+.|++++|++. +..|..|..+++|+.+++++|+
T Consensus 280 ~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 280 GVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 4444443 245667777777665 4566666677777777776663
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.1e-34 Score=320.59 Aligned_cols=245 Identities=18% Similarity=0.176 Sum_probs=185.3
Q ss_pred hcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--------hhhHHHHHHHHHHHhcCC----------------
Q 002155 678 TNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--------TQGHREFTAEMETLGKVK---------------- 733 (959)
Q Consensus 678 ~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------------- 733 (959)
.++|++.+.||+|+||+||+|++ +|+.||||++.... ....+.+.+|+.+++.++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788999999999999999998 68999999987542 223467889999998886
Q ss_pred ----------CCceeccccceec-------------CCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHH
Q 002155 734 ----------HQNLVPLLGYCSF-------------DEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAAR 790 (959)
Q Consensus 734 ----------h~niv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~ 790 (959)
||||+++++++.. ++..|+||||+++|++.+.+.. ..+++.++..++.||+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 6666666666654 7889999999999977666643 24789999999999999
Q ss_pred HHHHHHhcCCCCeEeCCCCCCCEEECCCC--------------------cEEEccccccccccccccccccccccccccc
Q 002155 791 GLAFLHHGFTPHIIHRDIKASNILLNEEF--------------------EAKVADFGLARLISACETHVSTDIAGTFGYI 850 (959)
Q Consensus 791 ~l~~LH~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~ 850 (959)
||+|||+ +.||+||||||+|||++.++ .+||+|||+|+.... ....||+.|+
T Consensus 173 aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------~~~~gt~~y~ 244 (336)
T 2vuw_A 173 SLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------GIVVFCDVSM 244 (336)
T ss_dssp HHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------TEEECCCCTT
T ss_pred HHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------CcEEEeeccc
Confidence 9999993 36899999999999999887 999999999986642 1347899999
Q ss_pred CCCcCCCCCCCCcCcchhHHHH-HHHHHhCCCCCCCCCccccCCchHHHHHHHhhcCccccccCccccCCCCHHHHHHHH
Q 002155 851 PPEYGQSGRSTTRGDVYSFGVI-LLELVTGKEPTGPEFKDIEGGNLVGWVFQKMKKGQAADVLDPTVLTADSKPMMLKML 929 (959)
Q Consensus 851 aPE~~~~~~~~~~~DvwslG~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 929 (959)
|||++.+.. +.++||||+|++ .+++++|..||... .........+...... ...............+.
T Consensus 245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~ 313 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV-------LWLHYLTDKMLKQMTF---KTKCNTPAMKQIKRKIQ 313 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH-------HHHHHHHHHHHHTCCC---SSCCCSHHHHHHHHHHH
T ss_pred ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch-------hhhhHHHHhhhhhhcc---CcccchhhhhhcCHHHH
Confidence 999988766 889999998777 77888899987320 0001111111111110 01111112345777899
Q ss_pred HHHHHcccCCCCCCCCHHHHH-HH
Q 002155 930 RIAGDCLSDNPAMRPTMLHVL-KF 952 (959)
Q Consensus 930 ~li~~cl~~dP~~Rps~~ell-~~ 952 (959)
+++.+||+.| |++|++ ++
T Consensus 314 dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 314 EFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHhccC-----CHHHHHhcC
Confidence 9999999977 999998 53
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=7.2e-32 Score=297.17 Aligned_cols=221 Identities=18% Similarity=0.227 Sum_probs=153.5
Q ss_pred ccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeee
Q 002155 42 NQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVI 121 (959)
Q Consensus 42 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 121 (959)
.+++.++++++.+. .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 36788888888887 6776554 67888999999888766668888889999999999888887888888888888888
Q ss_pred cccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEcccccccc--ccCccccCCcCCceEeccCCcccc
Q 002155 122 FRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG--SLPYEVGNAAALERLVLTNNMLKG 199 (959)
Q Consensus 122 ~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~n~i~~ 199 (959)
++|.+... |..+. .+|++|++++|++++..+..+.++++|++|++++|.++. ..+..|.++++|++|++++|.++.
T Consensus 108 s~n~l~~l-~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 108 SKNQLKEL-PEKMP-KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp CSSCCSBC-CSSCC-TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCCcCCcc-Chhhc-ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 88888743 33332 357777777777776666666666677777776666642 455566666666666666666663
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 200 HLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 200 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+|..+. ++|++|++++|.+++..|..+..+++|++|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 444333 56666666666666555666666666666666666666555555666666666666665553
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.4e-32 Score=297.62 Aligned_cols=248 Identities=25% Similarity=0.318 Sum_probs=133.3
Q ss_pred cCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEc
Q 002155 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVL 264 (959)
Q Consensus 185 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 264 (959)
.+++.++++++.++ .+|..+. ++|++|+|++|.|+++.+..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 35677777777777 4555543 56777788888777666667777778888888888777777777777788888888
Q ss_pred ccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcc--cCCccccCCCC
Q 002155 265 SHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG--KIPGSLSRLTN 342 (959)
Q Consensus 265 s~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~--~~~~~~~~l~~ 342 (959)
++|+++. +|.. ...+|+.|++++|.+++..+..+..+++|+.|++++|.++. ..+..|..+++
T Consensus 108 s~n~l~~-l~~~--------------~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~ 172 (330)
T 1xku_A 108 SKNQLKE-LPEK--------------MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 172 (330)
T ss_dssp CSSCCSB-CCSS--------------CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTT
T ss_pred CCCcCCc-cChh--------------hcccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCC
Confidence 7777651 1110 00233444444444443444444445555555555555432 34444555555
Q ss_pred CCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC
Q 002155 343 LTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF 422 (959)
Q Consensus 343 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 422 (959)
|++|++++|.++. +|..+. ++|+.|++++|++++..+..+..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 173 L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 249 (330)
T 1xku_A 173 LSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNN 249 (330)
T ss_dssp CCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCS
T ss_pred cCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCC
Confidence 5555555555542 222221 3444444444444444444444444444444444444444444444444444444444
Q ss_pred ccccCCCchhhhcccccceEeeccccccCCcc
Q 002155 423 NELDGQLPSSLSNILNLVGLYLQHNKLSGPVD 454 (959)
Q Consensus 423 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 454 (959)
|+++ .+|..+..+++|+.|++++|+|++++.
T Consensus 250 N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 250 NKLV-KVPGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp SCCS-SCCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred CcCc-cCChhhccCCCcCEEECCCCcCCccCh
Confidence 4444 344444444444444444444444433
No 296
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=1.2e-31 Score=292.26 Aligned_cols=248 Identities=26% Similarity=0.367 Sum_probs=211.8
Q ss_pred ccccEEecCCCcccc--cCCcCccCCCCCcEEEcCC-CcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCce
Q 002155 42 NQMESLLLSSNQFIG--KIPPEIGNCSMLKSISLSN-NFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118 (959)
Q Consensus 42 ~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 118 (959)
.++++|+|++|++.+ .+|+.|+.+++|++|+|++ |.+.+.+|..|..+++|++|+|++|++++..|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578889999999988 8888999999999999995 8888888988999999999999999998888888999999999
Q ss_pred eeecccccccccCcccCCC-cccEEeccCCccccccCccccccc-ceeEEEccccccccccCccccCCcCCceEeccCCc
Q 002155 119 LVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSE-TLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNM 196 (959)
Q Consensus 119 L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 196 (959)
|+|++|.+.+.+|..+..+ +|++|++++|++++.+|..+..++ +|++|++++|.+++.+|..|..++ |++|+|++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 9999999988888877766 488999999999888888888887 889999999999888888888887 9999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCC
Q 002155 197 LKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSK 276 (959)
Q Consensus 197 i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 276 (959)
+++..|..|..+++|++|+|++|.+++.+|. +..+++|++|+|++|++++.+|..|..+++|++|+|++|+++|.+|.
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~- 286 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ- 286 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC-
Confidence 9888888888999999999999998866554 78888899999999999888888888999999999999988765553
Q ss_pred CcchhhccCCCCccccccccceecCCCc
Q 002155 277 PSSYFRQANMPDLSFIQHHGVFDLSYNR 304 (959)
Q Consensus 277 ~~~~~~~~~~~~l~~l~~L~~l~L~~n~ 304 (959)
...+++|+.+++++|.
T Consensus 287 ------------~~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 287 ------------GGNLQRFDVSAYANNK 302 (313)
T ss_dssp ------------STTGGGSCGGGTCSSS
T ss_pred ------------CccccccChHHhcCCC
Confidence 2345566667777766
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=8.8e-35 Score=336.77 Aligned_cols=360 Identities=19% Similarity=0.173 Sum_probs=215.0
Q ss_pred cccEEecCCCcccccCCcC-ccCCCCCcEEEcCCCcCCC----CCCcccCCCCCCcEEEccCccccccCCccc-ccCCCC
Q 002155 43 QMESLLLSSNQFIGKIPPE-IGNCSMLKSISLSNNFLSG----SIPRELCTSESLEEIDLDGNLLTGTIEGVF-EKCSNL 116 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L 116 (959)
+|++|+|++|++....... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.+++..+..+ ..++.
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~- 82 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT- 82 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS-
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh-
Confidence 4555555555554322222 4455555555555555542 123444445555555555555543222111 11220
Q ss_pred ceeeecccccccccCcccCCCcccEEeccCCcccc----ccCcccccccceeEEEccccccccccCcccc-----CCcCC
Q 002155 117 SQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTG----IIPVSIWNSETLMEFSAANNLLEGSLPYEVG-----NAAAL 187 (959)
Q Consensus 117 ~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~----~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~-----~l~~L 187 (959)
...+|++|++++|++++ .++..+..+++|++|++++|.+++..+..+. ..++|
T Consensus 83 ------------------~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L 144 (461)
T 1z7x_W 83 ------------------PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRL 144 (461)
T ss_dssp ------------------TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCC
T ss_pred ------------------CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcc
Confidence 00025555555555553 3355556666666666666666543333332 24567
Q ss_pred ceEeccCCcccccC----CccccCCCCCCEEEccCCcCCccCCccccC-----CCCCCEEEcccccCCCC----Cchhhh
Q 002155 188 ERLVLTNNMLKGHL----PKEIGNLSALSVLDLNSNLFDGIIPYELGD-----CISLTTLDLGNNNLSGL----IPEKIA 254 (959)
Q Consensus 188 ~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~-----l~~L~~L~L~~N~l~~~----~~~~~~ 254 (959)
++|+|++|.+++.. +..+..+++|++|++++|.++...+..+.. +++|++|+|++|.++.. ++..+.
T Consensus 145 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~ 224 (461)
T 1z7x_W 145 EKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVA 224 (461)
T ss_dssp CEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHH
T ss_pred eEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHH
Confidence 77777777776532 455566677777777777776544444432 45777777777777753 355666
Q ss_pred cccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCccc--
Q 002155 255 DLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGK-- 332 (959)
Q Consensus 255 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~-- 332 (959)
.+++|++|++++|.++... +.. ..+..+..+++|+.|++++|.++..
T Consensus 225 ~~~~L~~L~Ls~n~l~~~~------------~~~-------------------l~~~~~~~~~~L~~L~L~~n~l~~~~~ 273 (461)
T 1z7x_W 225 SKASLRELALGSNKLGDVG------------MAE-------------------LCPGLLHPSSRLRTLWIWECGITAKGC 273 (461)
T ss_dssp HCTTCCEEECCSSBCHHHH------------HHH-------------------HHHHHTSTTCCCCEEECTTSCCCHHHH
T ss_pred hCCCccEEeccCCcCChHH------------HHH-------------------HHHHHhcCCCCceEEECcCCCCCHHHH
Confidence 7777777777777664100 000 0011122345666677777766643
Q ss_pred --CCccccCCCCCCEEEccCCCCCCCCCCCcC-----CCCcceEEEeeCcccCCc----cccccccCCCCcEEEccCCcC
Q 002155 333 --IPGSLSRLTNLTTLDLSRNQLTGPIPSEFG-----DSIKLQGLYLGNNQLTGS----IPWSLGSLGGLVKLNLTGNKL 401 (959)
Q Consensus 333 --~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~i 401 (959)
++..+..+++|++|++++|.++...+..+. ..++|+.|++++|.+++. ++..+..+++|++|++++|++
T Consensus 274 ~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i 353 (461)
T 1z7x_W 274 GDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRL 353 (461)
T ss_dssp HHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBC
T ss_pred HHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcc
Confidence 455666778888888888877643222222 235788888888888754 455667778899999999988
Q ss_pred CCCCCCccCC-----cccccccccCCccccC----CCchhhhcccccceEeeccccccCC
Q 002155 402 SGKVPTSFGN-----LKELTHLDLSFNELDG----QLPSSLSNILNLVGLYLQHNKLSGP 452 (959)
Q Consensus 402 ~~~~~~~~~~-----l~~L~~L~L~~N~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~ 452 (959)
++..+..+.. .++|++|++++|++++ .+|..+..+++|++|++++|++++.
T Consensus 354 ~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 354 EDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred ccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 7654444432 5689999999999885 6778888899999999999988754
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.8e-34 Score=332.57 Aligned_cols=235 Identities=18% Similarity=0.168 Sum_probs=165.2
Q ss_pred cccCCCccccEEecCCCcccc----cCCcCccCCCCCcEEEcCCCcCCCCCCccc-CCCC----CCcEEEccCccccc--
Q 002155 36 SWLGNWNQMESLLLSSNQFIG----KIPPEIGNCSMLKSISLSNNFLSGSIPREL-CTSE----SLEEIDLDGNLLTG-- 104 (959)
Q Consensus 36 ~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~----~L~~L~L~~n~l~~-- 104 (959)
..+..++.|++|+|++|++.. .++..+..+++|++|+|++|++++..+..+ ..++ +|++|+|++|+++.
T Consensus 22 ~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 101 (461)
T 1z7x_W 22 ELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAG 101 (461)
T ss_dssp HHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGG
T ss_pred HHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHH
Confidence 337788999999999999874 457778899999999999999986444333 2355 79999999999994
Q ss_pred --cCCcccccCCCCceeeecccccccccCcccC------CCcccEEeccCCcccccc----CcccccccceeEEEccccc
Q 002155 105 --TIEGVFEKCSNLSQLVIFRNHIYGSIPEYLS------KLPLMVLDLDSNNFTGII----PVSIWNSETLMEFSAANNL 172 (959)
Q Consensus 105 --~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~------~~~L~~L~ls~n~l~~~~----p~~~~~~~~L~~L~l~~n~ 172 (959)
.++..|..+++|++|+|++|.+.+..+..+. ..+|++|++++|++++.. +..+..+++|++|++++|.
T Consensus 102 ~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~ 181 (461)
T 1z7x_W 102 CGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 181 (461)
T ss_dssp HHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSB
T ss_pred HHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCC
Confidence 4588899999999999999998755443322 125888888888888644 4445556777777777777
Q ss_pred cccccCccccC-----CcCCceEeccCCccccc----CCccccCCCCCCEEEccCCcCCccC-----CccccCCCCCCEE
Q 002155 173 LEGSLPYEVGN-----AAALERLVLTNNMLKGH----LPKEIGNLSALSVLDLNSNLFDGII-----PYELGDCISLTTL 238 (959)
Q Consensus 173 l~~~~~~~~~~-----l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N~i~~~~-----~~~~~~l~~L~~L 238 (959)
+++..+..+.. .++|++|+|++|.+++. ++..+..+++|++|++++|.++... +..+..+++|++|
T Consensus 182 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L 261 (461)
T 1z7x_W 182 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTL 261 (461)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred cchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEE
Confidence 76544444432 45777777777777642 3556666777777777777765432 2222346677777
Q ss_pred EcccccCCCC----CchhhhcccCCCeeEcccccCC
Q 002155 239 DLGNNNLSGL----IPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 239 ~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
++++|+++.. ++..+..+++|++|+|++|.++
T Consensus 262 ~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 297 (461)
T 1z7x_W 262 WIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297 (461)
T ss_dssp ECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred ECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc
Confidence 7777776643 3555566667777777766653
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=280.77 Aligned_cols=193 Identities=23% Similarity=0.189 Sum_probs=109.9
Q ss_pred ccCCCCCCEEEccCCCCCCCCC-CCcCCCCcceEEEeeCc-ccCCccccccccCCCCcEEEccCCcCCCCCCCccCCccc
Q 002155 337 LSRLTNLTTLDLSRNQLTGPIP-SEFGDSIKLQGLYLGNN-QLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKE 414 (959)
Q Consensus 337 ~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 414 (959)
|..+++|++|++++|+++...+ ..|..+++|+.|++++| .++...+..+..+++|++|++++|++++..|..|.++++
T Consensus 120 ~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 199 (353)
T 2z80_A 120 FKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQN 199 (353)
T ss_dssp HTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSE
T ss_pred hCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhcccc
Confidence 3444444444444444443222 24444555555555554 244333445555555555555556555555666666666
Q ss_pred ccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeee
Q 002155 415 LTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDL 494 (959)
Q Consensus 415 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 494 (959)
|++|++++|+++...+..+..+++|+.|++++|++++.+...+.. ......++.++|
T Consensus 200 L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~-----------------------~~~~~~l~~l~L 256 (353)
T 2z80_A 200 VSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST-----------------------GETNSLIKKFTF 256 (353)
T ss_dssp EEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-----------------------------CCCCCCEEEE
T ss_pred CCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc-----------------------ccccchhhcccc
Confidence 777777777765333333445677777777777777654332211 112334455555
Q ss_pred ccccccc----cCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCC
Q 002155 495 HENKFTG----EIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVP 552 (959)
Q Consensus 495 s~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 552 (959)
++|.+++ .+|..+..+++|++|++++|+|++..+..|..+++|++|++++|++.+.+|
T Consensus 257 ~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 257 RNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 5555543 466777788888888888888874433345777888888777777766554
No 300
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.2e-28 Score=280.48 Aligned_cols=247 Identities=24% Similarity=0.231 Sum_probs=177.8
Q ss_pred ceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcc
Q 002155 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQ 376 (959)
Q Consensus 297 ~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 376 (959)
.++.+++.++ .+|..+. +.++.|+|++|+|+.+.+..|.++++|++|+|++|.++.+.+..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 3555555555 3444443 456666677777666666666677777777777777666666666666677777777776
Q ss_pred cCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC-ccccCCCchhhhcccccceEeeccccccCCccc
Q 002155 377 LTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF-NELDGQLPSSLSNILNLVGLYLQHNKLSGPVDE 455 (959)
Q Consensus 377 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 455 (959)
++...+..|..+++|++|+|++|+|+...+..|.++++|++|++++ |.+....+..|.++++|+.|++++|+++.+
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~--- 200 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI--- 200 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC---
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc---
Confidence 6655555666666777777777776665556666666777777766 334433344566666666666666666533
Q ss_pred cccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCC
Q 002155 456 LFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLS 535 (959)
Q Consensus 456 ~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 535 (959)
| .+..+++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..|..++
T Consensus 201 ------------------------~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 255 (440)
T 3zyj_A 201 ------------------------P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255 (440)
T ss_dssp ------------------------C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT
T ss_pred ------------------------c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCC
Confidence 2 356678899999999999988888999999999999999999988888899999
Q ss_pred CccEEecccCcCcccCCCC-cccCCCccccccCCCCCCCC
Q 002155 536 NLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 536 ~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~~ 574 (959)
+|++|+|++|+++++++.. ..+.+|+.+++.+|||.|+|
T Consensus 256 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 256 SLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp TCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred CCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 9999999999999888765 45788999999999999965
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=8.7e-29 Score=275.22 Aligned_cols=275 Identities=20% Similarity=0.199 Sum_probs=165.5
Q ss_pred EecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccccc
Q 002155 47 LLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHI 126 (959)
Q Consensus 47 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~ 126 (959)
.+++++++. .+|..+. ++|++|+|++|++++..+..|..+++|++|++++|++++..+..|.++++|
T Consensus 36 c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L---------- 102 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSL---------- 102 (353)
T ss_dssp EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC----------
T ss_pred eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCC----------
Confidence 455555544 4444333 245555555555554333345555555555555555554444444444444
Q ss_pred ccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccC-ccccCCcCCceEeccCC-cccccCCcc
Q 002155 127 YGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLP-YEVGNAAALERLVLTNN-MLKGHLPKE 204 (959)
Q Consensus 127 ~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~n-~i~~~~~~~ 204 (959)
++|++++|++++..+..+.++++|++|++++|.++...+ ..|.++++|++|++++| .++...+..
T Consensus 103 -------------~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 169 (353)
T 2z80_A 103 -------------EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKD 169 (353)
T ss_dssp -------------CEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred -------------CEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHH
Confidence 444555555554444445566666666666666663322 36777788888888877 466666677
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhcc
Q 002155 205 IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQA 284 (959)
Q Consensus 205 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 284 (959)
|.++++|++|++++|.+++..|..+..+++|++|++++|+++...+..+..+++|+.|++++|++++..+..
T Consensus 170 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~-------- 241 (353)
T 2z80_A 170 FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSE-------- 241 (353)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---------
T ss_pred ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccc--------
Confidence 888888888888888888777888888888888888888887654455566788888888888876432210
Q ss_pred CCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcc----cCCccccCCCCCCEEEccCCCCCCCCCCC
Q 002155 285 NMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSG----KIPGSLSRLTNLTTLDLSRNQLTGPIPSE 360 (959)
Q Consensus 285 ~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 360 (959)
+.. ......++.+++.++.+++ .+|..+..+++|++|++++|+++.+.+..
T Consensus 242 -l~~------------------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~ 296 (353)
T 2z80_A 242 -LST------------------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGI 296 (353)
T ss_dssp ------------------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTT
T ss_pred -ccc------------------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHH
Confidence 000 0112233444444444433 34566777778888888888777544444
Q ss_pred cCCCCcceEEEeeCcccCCc
Q 002155 361 FGDSIKLQGLYLGNNQLTGS 380 (959)
Q Consensus 361 ~~~l~~L~~L~L~~n~l~~~ 380 (959)
|..+++|++|++++|++.+.
T Consensus 297 ~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 297 FDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp TTTCTTCCEEECCSSCBCCC
T ss_pred HhcCCCCCEEEeeCCCccCc
Confidence 56667777777777766643
No 302
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.1e-28 Score=280.29 Aligned_cols=247 Identities=23% Similarity=0.206 Sum_probs=184.3
Q ss_pred ceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcc
Q 002155 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQ 376 (959)
Q Consensus 297 ~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 376 (959)
.++.+++.++ .+|..+. +.++.|+|++|+|+++.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 4555555555 3444443 467777777777777777777777777777777777777777777777777777777777
Q ss_pred cCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC-ccccCCCchhhhcccccceEeeccccccCCccc
Q 002155 377 LTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF-NELDGQLPSSLSNILNLVGLYLQHNKLSGPVDE 455 (959)
Q Consensus 377 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 455 (959)
++...+..|..+++|++|+|++|+++.+.+..|.++++|++|++++ |.+....+..|..+++|+.|++++|++++++
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~-- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP-- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC--
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc--
Confidence 7766666677777777777777777766666777777777777777 4454444456777777777777777766432
Q ss_pred cccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCC
Q 002155 456 LFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLS 535 (959)
Q Consensus 456 ~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 535 (959)
.+..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..++
T Consensus 213 --------------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 266 (452)
T 3zyi_A 213 --------------------------NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA 266 (452)
T ss_dssp --------------------------CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred --------------------------cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCC
Confidence 245677888888888888877788888888888888888888888888888888
Q ss_pred CccEEecccCcCcccCCCC-cccCCCccccccCCCCCCCC
Q 002155 536 NLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 536 ~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~~ 574 (959)
+|+.|+|++|+|+++++.. ..+.+|+.+++.+|||.|+|
T Consensus 267 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 267 SLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 8888888888888877765 44678888999999999965
No 303
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1e-27 Score=262.75 Aligned_cols=225 Identities=21% Similarity=0.211 Sum_probs=205.0
Q ss_pred CccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceee
Q 002155 41 WNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLV 120 (959)
Q Consensus 41 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 120 (959)
.+++++|+|++|++. .+|+.++.+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..|.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 478999999999998 89999999999999999999999 89999999999999999999999 6688899999999999
Q ss_pred ecccccccccCcccC----------CCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceE
Q 002155 121 IFRNHIYGSIPEYLS----------KLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERL 190 (959)
Q Consensus 121 L~~n~~~~~~p~~~~----------~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 190 (959)
|++|.+.+.+|..+. ..+|++|++++|+++ .+|..+..+++|++|++++|.++ .+|..++.+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEE
Confidence 999999989988775 346999999999998 77888999999999999999998 567789999999999
Q ss_pred eccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 191 VLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 191 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+|++|.+.+.+|..|.++++|++|+|++|.+.+.+|..+.++++|++|+|++|++.+.+|+.+..+++|+.+++..+.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99999998899999999999999999999888889999999999999999999998899999999999999999887664
No 304
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=6.3e-28 Score=259.66 Aligned_cols=224 Identities=24% Similarity=0.204 Sum_probs=186.3
Q ss_pred cEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccc
Q 002155 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRN 124 (959)
Q Consensus 45 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 124 (959)
+.++.+++++. .+|..+ .++|++|+|++|++++..+..|..+++|++|++++|.++++.+..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 56777777776 666543 467888888888888666677888888888888888888777778888888888888888
Q ss_pred c-cccccCcccCCC-cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCC
Q 002155 125 H-IYGSIPEYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLP 202 (959)
Q Consensus 125 ~-~~~~~p~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 202 (959)
. +....|..+..+ +|++|++++|++++..|..+.++++|++|++++|.+++..+..|..+++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 6 666666666665 48888888888888878888888899999999998886666778899999999999999997777
Q ss_pred ccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCC
Q 002155 203 KEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSG 271 (959)
Q Consensus 203 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 271 (959)
..|.++++|++|+|++|.+++..|..|..+++|++|++++|++++..+..|..+++|+.|++++|.+.+
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 789999999999999999998889999999999999999999998877889999999999999998864
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=3.2e-28 Score=264.95 Aligned_cols=242 Identities=21% Similarity=0.191 Sum_probs=190.0
Q ss_pred cCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCC--CCcccCCCCCCcEEEccCccccc
Q 002155 27 KNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGS--IPRELCTSESLEEIDLDGNLLTG 104 (959)
Q Consensus 27 ~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~--~p~~~~~l~~L~~L~L~~n~l~~ 104 (959)
.++-.+.+|..+. +.|++|+|++|++....+..|..+++|++|+|++|+++.. .|..+..+++|++|++++|.++.
T Consensus 15 ~~~~l~~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~ 92 (306)
T 2z66_A 15 NSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT 92 (306)
T ss_dssp CSSCCSSCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE
T ss_pred CCCCcccCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc
Confidence 3444556776554 5788888888888743334478888888888888888732 25667778888888888888884
Q ss_pred cCCcccccCCCCceeeecccccccccC-cccCCC-cccEEeccCCccccccCcccccccceeEEEcccccccc-ccCccc
Q 002155 105 TIEGVFEKCSNLSQLVIFRNHIYGSIP-EYLSKL-PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG-SLPYEV 181 (959)
Q Consensus 105 ~~~~~~~~l~~L~~L~L~~n~~~~~~p-~~~~~~-~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~-~~~~~~ 181 (959)
.+..|..+++|++|++++|.+.+..+ ..+..+ +|++|++++|++.+..+..+..+++|++|++++|.+++ ..|..|
T Consensus 93 -l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 171 (306)
T 2z66_A 93 -MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF 171 (306)
T ss_dssp -EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCC
T ss_pred -ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHH
Confidence 45568888888888888888876655 445554 58888888888888888888888888888888888876 577888
Q ss_pred cCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhccc-CCC
Q 002155 182 GNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLA-QLQ 260 (959)
Q Consensus 182 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~ 260 (959)
..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+..+..+++|++|+|++|++++..|..+..++ +|+
T Consensus 172 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~ 251 (306)
T 2z66_A 172 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA 251 (306)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCC
T ss_pred hhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCC
Confidence 8888888888888888877788888888888888888888877777788888888888888888888888888874 888
Q ss_pred eeEcccccCCC
Q 002155 261 CLVLSHNNLSG 271 (959)
Q Consensus 261 ~L~Ls~N~l~~ 271 (959)
.|+|++|.+++
T Consensus 252 ~L~L~~N~~~~ 262 (306)
T 2z66_A 252 FLNLTQNDFAC 262 (306)
T ss_dssp EEECTTCCEEC
T ss_pred EEEccCCCeec
Confidence 88888888864
No 306
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=5.2e-28 Score=263.30 Aligned_cols=135 Identities=23% Similarity=0.259 Sum_probs=68.0
Q ss_pred ccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCC-CCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEE
Q 002155 317 VVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG-PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLN 395 (959)
Q Consensus 317 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 395 (959)
++|+.|++++|.+++..+..|..+++|++|++++|.+.+ ..|..|..+++|+.|++++|++++..|..+..+++|++|+
T Consensus 126 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 205 (306)
T 2z66_A 126 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205 (306)
T ss_dssp TTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEE
Confidence 333333333333333444444444455555555554443 2344445555555555555555544444555555555555
Q ss_pred ccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhccc-ccceEeeccccccC
Q 002155 396 LTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLSG 451 (959)
Q Consensus 396 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~ 451 (959)
+++|++++..+..|..+++|++|++++|++++..|..+..++ +|+.|++++|+++.
T Consensus 206 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 555555544444555555555555555555555555555553 55555666555554
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.5e-27 Score=271.63 Aligned_cols=239 Identities=22% Similarity=0.191 Sum_probs=144.4
Q ss_pred CCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCC
Q 002155 28 NQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIE 107 (959)
Q Consensus 28 ~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~ 107 (959)
++-.+.+|..+. +.++.|+|++|++.+..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++.+.+
T Consensus 52 ~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 129 (440)
T 3zyj_A 52 RKNLREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPN 129 (440)
T ss_dssp SCCCSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCT
T ss_pred CCCcCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCH
Confidence 344445555544 356666666666665555566666666666666666665555566666666666666666665555
Q ss_pred cccccCCCCceeeecccccccccCcccCCC-cccEEeccCC-ccccccCcccccccceeEEEccccccccccCccccCCc
Q 002155 108 GVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSN-NFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAA 185 (959)
Q Consensus 108 ~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n-~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 185 (959)
+.|..+++|++|+|++|.+....+..+..+ +|++|++++| .+..+.+..|.++++|++|++++|.++ .+| .+..++
T Consensus 130 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~ 207 (440)
T 3zyj_A 130 GAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLI 207 (440)
T ss_dssp TTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCS
T ss_pred hHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCc
Confidence 566666666666666666665555555544 3666666663 333333345666666666666666665 333 355666
Q ss_pred CCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcc
Q 002155 186 ALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLS 265 (959)
Q Consensus 186 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 265 (959)
+|++|+|++|.|++..|..|.++++|+.|+|++|.|+.+.+..|.++++|++|+|++|+++.+.+..|..+++|+.|+|+
T Consensus 208 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 287 (440)
T 3zyj_A 208 KLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLH 287 (440)
T ss_dssp SCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECC
T ss_pred ccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcC
Confidence 66666666666665556666666666666666666666666666666666666666666666555556666666666666
Q ss_pred cccCC
Q 002155 266 HNNLS 270 (959)
Q Consensus 266 ~N~l~ 270 (959)
+|.+.
T Consensus 288 ~Np~~ 292 (440)
T 3zyj_A 288 HNPWN 292 (440)
T ss_dssp SSCEE
T ss_pred CCCcc
Confidence 66554
No 308
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1.3e-30 Score=311.92 Aligned_cols=404 Identities=16% Similarity=0.109 Sum_probs=282.8
Q ss_pred cccCCCccccEEecCCCccc---ccCCcCcc------------CCCCCcEEEcCCCcCCCCCCcccCCC--CCCcEEEcc
Q 002155 36 SWLGNWNQMESLLLSSNQFI---GKIPPEIG------------NCSMLKSISLSNNFLSGSIPRELCTS--ESLEEIDLD 98 (959)
Q Consensus 36 ~~~~~l~~L~~L~L~~n~l~---~~~~~~~~------------~l~~L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~L~ 98 (959)
..+..++.|++|+|+++... +.+|..++ .+++|++|+|++|.+++..+..+... .+|++|+|+
T Consensus 67 ~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~ 146 (592)
T 3ogk_B 67 RLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLD 146 (592)
T ss_dssp HHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEE
T ss_pred HHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECc
Confidence 33456778999999875431 34454444 68889999999998876666666553 459999998
Q ss_pred Ccc-ccc-cCCcccccCCCCceeeecccccccccCc----ccCC-CcccEEeccCCccc----cccCcccccccceeEEE
Q 002155 99 GNL-LTG-TIEGVFEKCSNLSQLVIFRNHIYGSIPE----YLSK-LPLMVLDLDSNNFT----GIIPVSIWNSETLMEFS 167 (959)
Q Consensus 99 ~n~-l~~-~~~~~~~~l~~L~~L~L~~n~~~~~~p~----~~~~-~~L~~L~ls~n~l~----~~~p~~~~~~~~L~~L~ 167 (959)
+|. ++. ..+.....+++|++|+|++|.+.+..+. .... .+|++|++++|+++ +.++..+.++++|++|+
T Consensus 147 ~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~ 226 (592)
T 3ogk_B 147 KCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVK 226 (592)
T ss_dssp SCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEE
T ss_pred CCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEe
Confidence 887 221 1223345789999999999987655322 2222 35889999999887 34455566788999999
Q ss_pred ccccccccccCccccCCcCCceEeccCCccc---ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEccccc
Q 002155 168 AANNLLEGSLPYEVGNAAALERLVLTNNMLK---GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN 244 (959)
Q Consensus 168 l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~---~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 244 (959)
+++|.+.+ +|..+.++++|++|+++.+... ...+..+..+++|+.|+++++... .+|..+..+++|++|+|++|.
T Consensus 227 L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~ 304 (592)
T 3ogk_B 227 VGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYAL 304 (592)
T ss_dssp CSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCC
T ss_pred ccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCc
Confidence 99998884 6788889999999999864433 244567788889999999887554 677778888899999999998
Q ss_pred CCCCCc-hhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCC-ccccccccceecC-----------CCcCCCC-CC
Q 002155 245 LSGLIP-EKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPD-LSFIQHHGVFDLS-----------YNRLSGP-IP 310 (959)
Q Consensus 245 l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~-l~~l~~L~~l~L~-----------~n~l~~~-~p 310 (959)
+++... ..+..+++|++|+++ +.+.. ..++. ...+++|+.|+++ .|.+++. ++
T Consensus 305 l~~~~~~~~~~~~~~L~~L~L~-~~~~~------------~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~ 371 (592)
T 3ogk_B 305 LETEDHCTLIQKCPNLEVLETR-NVIGD------------RGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI 371 (592)
T ss_dssp CCHHHHHHHHTTCTTCCEEEEE-GGGHH------------HHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHH
T ss_pred CCHHHHHHHHHhCcCCCEEecc-CccCH------------HHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHH
Confidence 764433 346788999999998 43321 11111 1345678888888 3555532 22
Q ss_pred cccCCcccccEEEccCCcCcccCCccccC-CCCCCEEEcc----CCCCCCC-----CCCCcCCCCcceEEEeeCcc--cC
Q 002155 311 EELGSCVVVVDLLLNNNMLSGKIPGSLSR-LTNLTTLDLS----RNQLTGP-----IPSEFGDSIKLQGLYLGNNQ--LT 378 (959)
Q Consensus 311 ~~~~~~~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~Ls----~n~l~~~-----~~~~~~~l~~L~~L~L~~n~--l~ 378 (959)
.....+++|+.|++..|.+++..+..+.. +++|+.|+++ .|.+++. .+..+.++++|+.|++++|. ++
T Consensus 372 ~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~ 451 (592)
T 3ogk_B 372 ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLT 451 (592)
T ss_dssp HHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCC
T ss_pred HHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCcc
Confidence 22345788999999888888776666655 8889999996 5667643 12225567889999997543 65
Q ss_pred Cccccccc-cCCCCcEEEccCCcCCCC-CCCccCCcccccccccCCccccCC-CchhhhcccccceEeeccccccCCcc
Q 002155 379 GSIPWSLG-SLGGLVKLNLTGNKLSGK-VPTSFGNLKELTHLDLSFNELDGQ-LPSSLSNILNLVGLYLQHNKLSGPVD 454 (959)
Q Consensus 379 ~~~~~~~~-~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~ 454 (959)
+..+..+. .+++|++|++++|++++. .+..+.++++|++|++++|.+++. ++..+..+++|+.|++++|+++....
T Consensus 452 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~ 530 (592)
T 3ogk_B 452 DLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQ 530 (592)
T ss_dssp HHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCT
T ss_pred HHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHH
Confidence 54444443 478899999999988752 344557788899999999987643 34445678889999999998876543
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3.1e-27 Score=271.87 Aligned_cols=235 Identities=23% Similarity=0.206 Sum_probs=118.9
Q ss_pred cCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccc
Q 002155 32 GSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFE 111 (959)
Q Consensus 32 ~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 111 (959)
+.+|..+. +.+++|+|++|++.+..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++.+++..|.
T Consensus 67 ~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 144 (452)
T 3zyi_A 67 SEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFE 144 (452)
T ss_dssp SSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSS
T ss_pred CccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhc
Confidence 34444333 3455555555555544455555555555555555555544445555555555555555555554455555
Q ss_pred cCCCCceeeecccccccccCcccCCC-cccEEeccC-CccccccCcccccccceeEEEccccccccccCccccCCcCCce
Q 002155 112 KCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDS-NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALER 189 (959)
Q Consensus 112 ~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~-n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 189 (959)
.+++|++|+|++|.+....+..+..+ +|++|++++ |.+..+.+..|.++++|+.|++++|.+++ +| .+..+++|++
T Consensus 145 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~ 222 (452)
T 3zyi_A 145 YLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEE 222 (452)
T ss_dssp SCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCE
T ss_pred ccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccE
Confidence 55555555555555554444444443 255555555 22333333344555555555555555542 22 3445555555
Q ss_pred EeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccC
Q 002155 190 LVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNL 269 (959)
Q Consensus 190 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 269 (959)
|+|++|.|++..|..|.++++|++|+|++|.++++.+..|.++++|++|+|++|+++.+.+..|..+++|+.|+|++|.+
T Consensus 223 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 223 LEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp EECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred EECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 55555555544455555555555555555555555455555555555555555555544444455555555555555544
Q ss_pred C
Q 002155 270 S 270 (959)
Q Consensus 270 ~ 270 (959)
.
T Consensus 303 ~ 303 (452)
T 3zyi_A 303 N 303 (452)
T ss_dssp E
T ss_pred C
Confidence 3
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.3e-27 Score=255.29 Aligned_cols=250 Identities=25% Similarity=0.259 Sum_probs=126.3
Q ss_pred cCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEccccc-CCCCCchhhhcccCCCeeE
Q 002155 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN-LSGLIPEKIADLAQLQCLV 263 (959)
Q Consensus 185 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~ 263 (959)
++|++|+|++|.|++..+..|..+++|++|+|++|.++++.|..|..+++|++|+|++|+ ++...+..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 344555555555554444445555555555555555554444445555555555555554 4444444444444444444
Q ss_pred cccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCC
Q 002155 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNL 343 (959)
Q Consensus 264 Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L 343 (959)
+++|.++ +..+..|..+++|
T Consensus 112 l~~n~l~------------------------------------------------------------~~~~~~~~~l~~L 131 (285)
T 1ozn_A 112 LDRCGLQ------------------------------------------------------------ELGPGLFRGLAAL 131 (285)
T ss_dssp CTTSCCC------------------------------------------------------------CCCTTTTTTCTTC
T ss_pred CCCCcCC------------------------------------------------------------EECHhHhhCCcCC
Confidence 4444432 2333344444555
Q ss_pred CEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCc
Q 002155 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423 (959)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 423 (959)
++|++++|+++...+..|..+++|+.|++++|++++..+..+..+++|++|++++|++++..|..|.++++|++|++++|
T Consensus 132 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 132 QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 55555555555444444555555555555555555444444555555555555555555555555555566666666666
Q ss_pred cccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccC--ccccceeeeccc
Q 002155 424 ELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGN--LSYLTNLDLHEN 497 (959)
Q Consensus 424 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~--l~~L~~L~Ls~N 497 (959)
++++..+..+..+++|+.|++++|++....+... . ...++.+..+.+.+....|..+.+ +..++..++.+|
T Consensus 212 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~--~-~~~l~~~~~~~~~~~c~~p~~l~g~~l~~l~~~~l~~C 284 (285)
T 1ozn_A 212 NLSALPTEALAPLRALQYLRLNDNPWVCDCRARP--L-WAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC 284 (285)
T ss_dssp CCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHH--H-HHHHHHCCSEECCCBEEESGGGTTCBGGGSCGGGSCCC
T ss_pred cCCcCCHHHcccCcccCEEeccCCCccCCCCcHH--H-HHHHHhcccccCccccCCchHhCCcChhhcCHHHhccC
Confidence 6655444555666666666666666553222110 0 012344445556666566666543 445555555444
No 311
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=3e-30 Score=308.73 Aligned_cols=252 Identities=15% Similarity=0.125 Sum_probs=113.1
Q ss_pred CCcCCceEeccCCccccc----CCccccCCCCCCEEEccCCcCCc----cCCccccCCCCCCEEEcccccCCCCCchhhh
Q 002155 183 NAAALERLVLTNNMLKGH----LPKEIGNLSALSVLDLNSNLFDG----IIPYELGDCISLTTLDLGNNNLSGLIPEKIA 254 (959)
Q Consensus 183 ~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 254 (959)
++++|++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+.++++|++|+|++|.+.+ ++..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 455555666665555443 22233455666666666666652 233334456666666666666654 356666
Q ss_pred cccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCC
Q 002155 255 DLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP 334 (959)
Q Consensus 255 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~ 334 (959)
.+++|++|+++++......+ .....+..+.+|+.++++++.. ..+|..+..+++|++|++++|.+++...
T Consensus 241 ~~~~L~~L~l~~~~~~~~~~---------~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~ 310 (592)
T 3ogk_B 241 AAANLEEFCGGSLNEDIGMP---------EKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDH 310 (592)
T ss_dssp HCTTCCEEEECBCCCCTTCT---------TSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHH
T ss_pred hhhHHHhhcccccccccchH---------HHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHH
Confidence 66666666666422110000 0111222333444444444321 2344444445555555555555433222
Q ss_pred -ccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEee-----------CcccCCccc-cccccCCCCcEEEccCCcC
Q 002155 335 -GSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLG-----------NNQLTGSIP-WSLGSLGGLVKLNLTGNKL 401 (959)
Q Consensus 335 -~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~-----------~n~l~~~~~-~~~~~l~~L~~L~L~~N~i 401 (959)
..+..+++|++|+++++-.....+..+..+++|++|+++ .|.+++... ..+..+++|++|+++.|.+
T Consensus 311 ~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l 390 (592)
T 3ogk_B 311 CTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDI 390 (592)
T ss_dssp HHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCC
T ss_pred HHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCc
Confidence 223445555555555221111111122334445555555 233332211 1123345555555555555
Q ss_pred CCCCCCccCC-cccccccccC----CccccCC-----CchhhhcccccceEeec
Q 002155 402 SGKVPTSFGN-LKELTHLDLS----FNELDGQ-----LPSSLSNILNLVGLYLQ 445 (959)
Q Consensus 402 ~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~l~~l~~L~~L~L~ 445 (959)
++..+..+.. +++|++|+++ .|.+++. ++..+..+++|+.|+++
T Consensus 391 ~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~ 444 (592)
T 3ogk_B 391 TNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFY 444 (592)
T ss_dssp CHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred cHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEe
Confidence 4433333333 4455555553 4444432 22224445555555554
No 312
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=7.2e-27 Score=255.95 Aligned_cols=238 Identities=21% Similarity=0.224 Sum_probs=194.9
Q ss_pred CcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeE
Q 002155 184 AAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLV 263 (959)
Q Consensus 184 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 263 (959)
.+.++.|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..|..+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 477888999999888 67888888999999999999988 78888888999999999999988 5588899999999999
Q ss_pred cccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCC
Q 002155 264 LSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNL 343 (959)
Q Consensus 264 Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L 343 (959)
|++|.+.+.+|..... + ..+..+..+++|+.|++++|+++ .+|..+..+++|
T Consensus 157 L~~n~~~~~~p~~~~~-----------------------~----~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L 208 (328)
T 4fcg_A 157 IRACPELTELPEPLAS-----------------------T----DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNL 208 (328)
T ss_dssp EEEETTCCCCCSCSEE-----------------------E----C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTC
T ss_pred CCCCCCccccChhHhh-----------------------c----cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCC
Confidence 9998877666542111 0 12334566778888888888887 667778888888
Q ss_pred CEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCc
Q 002155 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423 (959)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 423 (959)
++|++++|++++ +|..+..+++|+.|++++|.+.+.+|..+..+++|++|++++|++.+.+|..+.++++|++|+|++|
T Consensus 209 ~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n 287 (328)
T 4fcg_A 209 KSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGC 287 (328)
T ss_dssp CEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTC
T ss_pred CEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCC
Confidence 888888888885 5557888888899999988888888888888999999999998888888888989999999999999
Q ss_pred cccCCCchhhhcccccceEeeccccccCCc
Q 002155 424 ELDGQLPSSLSNILNLVGLYLQHNKLSGPV 453 (959)
Q Consensus 424 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 453 (959)
.+.+.+|..+..+++|+.+++..|.+..+.
T Consensus 288 ~~~~~iP~~l~~L~~L~~l~l~~~~~~~l~ 317 (328)
T 4fcg_A 288 VNLSRLPSLIAQLPANCIILVPPHLQAQLD 317 (328)
T ss_dssp TTCCCCCGGGGGSCTTCEEECCGGGSCC--
T ss_pred CchhhccHHHhhccCceEEeCCHHHHHHHh
Confidence 888889999999999999988888776543
No 313
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1e-28 Score=269.87 Aligned_cols=217 Identities=21% Similarity=0.195 Sum_probs=150.7
Q ss_pred ccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeee
Q 002155 42 NQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVI 121 (959)
Q Consensus 42 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 121 (959)
..++.++++.+.+...++..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+ |..+++|++|++
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 345666777777764555555666778888888888876666777788888888888888776554 777788888888
Q ss_pred cccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccC
Q 002155 122 FRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHL 201 (959)
Q Consensus 122 ~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 201 (959)
++|.+.+..+. .+|++|++++|++++..+.. +++|++|++++|.+++..+..++.+++|++|+|++|.+++..
T Consensus 88 s~n~l~~l~~~----~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 88 NNNYVQELLVG----PSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp CSSEEEEEEEC----TTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred cCCccccccCC----CCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 88877654322 45777777777777655443 466777777777777666667777777777777777777665
Q ss_pred Ccccc-CCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 202 PKEIG-NLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 202 ~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+..+. .+++|++|+|++|.|+.. + ....+++|++|+|++|+++++. ..|..+++|+.|+|++|+++
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCccc
Confidence 66553 677777777777777754 2 2334677777777777777553 34777777777777777664
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=3.3e-28 Score=265.20 Aligned_cols=245 Identities=23% Similarity=0.229 Sum_probs=181.7
Q ss_pred cccceecCCCcCCCCCCcccCCcccccEEEccCCcCc-ccCCcccc-------CCCCCCEEEccCCCCCCCCCCCc--CC
Q 002155 294 HHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLS-GKIPGSLS-------RLTNLTTLDLSRNQLTGPIPSEF--GD 363 (959)
Q Consensus 294 ~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~-~~~~~~~~-------~l~~L~~L~Ls~n~l~~~~~~~~--~~ 363 (959)
+|+.+++++|.+ .+|..+... ++.|++++|.++ ...|..+. ++++|++|++++|++++..|..+ ..
T Consensus 44 ~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 44 SLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp ECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 344445555555 344444433 666677777763 34454444 68889999999998887777765 78
Q ss_pred CCcceEEEeeCcccCCccccccccC-----CCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCC--Cchhh--h
Q 002155 364 SIKLQGLYLGNNQLTGSIPWSLGSL-----GGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQ--LPSSL--S 434 (959)
Q Consensus 364 l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~l--~ 434 (959)
+++|++|++++|++++. |..+..+ ++|++|++++|++++..+..|+++++|++|++++|++.+. .+..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 88899999999998866 7777776 8899999999999888888899999999999999987654 23344 7
Q ss_pred cccccceEeeccccccCCcc---ccccchhhhhhceeccCCcccCCCCC-ccccCccccceeeeccccccccCCcCCcCC
Q 002155 435 NILNLVGLYLQHNKLSGPVD---ELFSNSAAWKIATMNMSNNLFDGGLP-RSLGNLSYLTNLDLHENKFTGEIPPDLGNL 510 (959)
Q Consensus 435 ~l~~L~~L~L~~N~l~~~~~---~~~~~~~~~~l~~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 510 (959)
.+++|+.|++++|+|++++. ..|.... +++.|++++|.+++..| ..+..+++|++|+|++|+++ .+|..+.
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARV--QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTC--CCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCC--CCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 88899999999999885432 2222222 67778888888877664 45566788888888888888 7777776
Q ss_pred CCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCccc
Q 002155 511 MQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGM 550 (959)
Q Consensus 511 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 550 (959)
++|++|||++|+|++. |. +..+++|++|++++|++++.
T Consensus 274 ~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 274 AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 7888888888888865 55 88888888888888888753
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=7.5e-28 Score=262.36 Aligned_cols=230 Identities=23% Similarity=0.238 Sum_probs=111.6
Q ss_pred CCCcccCCCccccEEecCCCcc-cccCCcCcc-------CCCCCcEEEcCCCcCCCCCCccc--CCCCCCcEEEccCccc
Q 002155 33 SLPSWLGNWNQMESLLLSSNQF-IGKIPPEIG-------NCSMLKSISLSNNFLSGSIPREL--CTSESLEEIDLDGNLL 102 (959)
Q Consensus 33 ~lp~~~~~l~~L~~L~L~~n~l-~~~~~~~~~-------~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~L~~n~l 102 (959)
.+|..+... |+.|+|++|++ ...+|..+. ++++|++|+|++|++++.+|..+ ..+++|++|+|++|++
T Consensus 56 ~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 133 (312)
T 1wwl_A 56 ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSW 133 (312)
T ss_dssp CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBC
T ss_pred ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCC
Confidence 555544433 55555555555 223444443 45555555555555555555544 5555555555555555
Q ss_pred cccCCcccccC-----CCCceeeecccccccccCcccCCC-cccEEeccCCccccc--cCccc--ccccceeEEEccccc
Q 002155 103 TGTIEGVFEKC-----SNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLDSNNFTGI--IPVSI--WNSETLMEFSAANNL 172 (959)
Q Consensus 103 ~~~~~~~~~~l-----~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n~l~~~--~p~~~--~~~~~L~~L~l~~n~ 172 (959)
++. |..|..+ ++|++|+|++|.+.+..|..+..+ +|++|++++|++.+. .|..+ ..+++|++|++++|+
T Consensus 134 ~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~ 212 (312)
T 1wwl_A 134 ATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212 (312)
T ss_dssp SSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSC
T ss_pred cch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCc
Confidence 554 4445544 555555555555555444444444 255555555554433 11122 444555555555555
Q ss_pred ccc---ccCccccCCcCCceEeccCCcccccCC-ccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCC
Q 002155 173 LEG---SLPYEVGNAAALERLVLTNNMLKGHLP-KEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGL 248 (959)
Q Consensus 173 l~~---~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 248 (959)
+++ .....+.++++|++|+|++|++++..| ..+..+++|++|+|++|.|+ .+|..+. ++|++|+|++|+|++.
T Consensus 213 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC
T ss_pred CcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC
Confidence 541 111223344555555555555554332 23344455555555555554 3333333 4455555555555443
Q ss_pred CchhhhcccCCCeeEcccccCC
Q 002155 249 IPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 249 ~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
|. +..+++|++|+|++|+++
T Consensus 290 -p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 290 -PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp -CC-TTTSCEEEEEECTTCTTT
T ss_pred -hh-HhhCCCCCEEeccCCCCC
Confidence 32 445555555555555443
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=8.9e-26 Score=265.85 Aligned_cols=268 Identities=27% Similarity=0.342 Sum_probs=145.7
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeec
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIF 122 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 122 (959)
.++.|++++|++. .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|+|+++++ .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC----CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC----CCCCCCEEECc
Confidence 4677777777776 6666655 67777777777777 4554 45677777777777764333 45566666665
Q ss_pred ccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCC
Q 002155 123 RNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLP 202 (959)
Q Consensus 123 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 202 (959)
+|.+.+..+ ...+|++|++++|++++ +|.. +++|++|+|++|++++ +|
T Consensus 110 ~N~l~~l~~---~l~~L~~L~L~~N~l~~-------------------------lp~~---l~~L~~L~Ls~N~l~~-l~ 157 (622)
T 3g06_A 110 SNPLTHLPA---LPSGLCKLWIFGNQLTS-------------------------LPVL---PPGLQELSVSDNQLAS-LP 157 (622)
T ss_dssp SCCCCCCCC---CCTTCCEEECCSSCCSC-------------------------CCCC---CTTCCEEECCSSCCSC-CC
T ss_pred CCcCCCCCC---CCCCcCEEECCCCCCCc-------------------------CCCC---CCCCCEEECcCCcCCC-cC
Confidence 555543221 11123333333333332 2211 2444444444444442 22
Q ss_pred ccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhh
Q 002155 203 KEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFR 282 (959)
Q Consensus 203 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 282 (959)
. .+++|+.|++++|.|+. +| ..+++|+.|+|++|+++++ |. .+++|+.|++++|.+
T Consensus 158 ~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l------------- 213 (622)
T 3g06_A 158 A---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASL-PT---LPSELYKLWAYNNRL------------- 213 (622)
T ss_dssp C---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCC-------------
T ss_pred C---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCC-CC---ccchhhEEECcCCcc-------------
Confidence 2 12344444444444442 22 2233444444444444432 11 123344444443333
Q ss_pred ccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcC
Q 002155 283 QANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFG 362 (959)
Q Consensus 283 ~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 362 (959)
+. +|. .+++|++|++++|++++ +| .
T Consensus 214 -----------------------------------------------~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~ 238 (622)
T 3g06_A 214 -----------------------------------------------TS-LPA---LPSGLKELIVSGNRLTS-LP---V 238 (622)
T ss_dssp -----------------------------------------------SS-CCC---CCTTCCEEECCSSCCSC-CC---C
T ss_pred -----------------------------------------------cc-cCC---CCCCCCEEEccCCccCc-CC---C
Confidence 31 111 12556666666666664 33 3
Q ss_pred CCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhccc
Q 002155 363 DSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL 437 (959)
Q Consensus 363 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 437 (959)
.+++|+.|++++|.|+ .+|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|++|++++..|..+..++
T Consensus 239 ~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 239 LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 3456777777777776 3443 4567777777777777 5577777788888888888888777777666655
No 317
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=1.3e-25 Score=264.32 Aligned_cols=193 Identities=27% Similarity=0.321 Sum_probs=138.8
Q ss_pred hhhhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCc
Q 002155 21 LTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGN 100 (959)
Q Consensus 21 ~~~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 100 (959)
++.++..++-++.+|..+. ++|++|+|++|++. .+|. .+++|++|+|++|+++ .+|. .+++|++|+|++|
T Consensus 42 l~~L~ls~n~L~~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N 111 (622)
T 3g06_A 42 NAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSN 111 (622)
T ss_dssp CCEEECCSSCCSCCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSC
T ss_pred CcEEEecCCCcCccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCC
Confidence 4456666666679999887 79999999999998 6776 6799999999999998 5665 6899999999999
Q ss_pred cccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCcc
Q 002155 101 LLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYE 180 (959)
Q Consensus 101 ~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~ 180 (959)
.+++++. .+++|+.|++++|.+.+ +|..+ .+|++|++++|+++++ |.
T Consensus 112 ~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~l--~~L~~L~Ls~N~l~~l-~~------------------------- 158 (622)
T 3g06_A 112 PLTHLPA----LPSGLCKLWIFGNQLTS-LPVLP--PGLQELSVSDNQLASL-PA------------------------- 158 (622)
T ss_dssp CCCCCCC----CCTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCSCC-CC-------------------------
T ss_pred cCCCCCC----CCCCcCEEECCCCCCCc-CCCCC--CCCCEEECcCCcCCCc-CC-------------------------
Confidence 9997654 67899999999999986 44433 4578888888877743 22
Q ss_pred ccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCC
Q 002155 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQ 260 (959)
Q Consensus 181 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 260 (959)
.+++|+.|++++|.|+. +| ..+++|+.|+|++|.|++ +|.. +++|+.|++++|.++.+ |. .+++|+
T Consensus 159 --~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l-~~---~~~~L~ 224 (622)
T 3g06_A 159 --LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL-PA---LPSGLK 224 (622)
T ss_dssp --CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-CC---CCTTCC
T ss_pred --ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc-CC---CCCCCC
Confidence 12455666666666663 34 345667777777777764 3322 35677777777777643 32 235666
Q ss_pred eeEcccccCC
Q 002155 261 CLVLSHNNLS 270 (959)
Q Consensus 261 ~L~Ls~N~l~ 270 (959)
.|+|++|.|+
T Consensus 225 ~L~Ls~N~L~ 234 (622)
T 3g06_A 225 ELIVSGNRLT 234 (622)
T ss_dssp EEECCSSCCS
T ss_pred EEEccCCccC
Confidence 6666666554
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.4e-27 Score=260.94 Aligned_cols=247 Identities=25% Similarity=0.207 Sum_probs=165.3
Q ss_pred ccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccC
Q 002155 179 YEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQ 258 (959)
Q Consensus 179 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 258 (959)
..+..+++|++|+|++|.|++..|..|.++++|++|+|++|.+++..+ +..+++|++|+|++|++++.. ..++
T Consensus 28 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~ 100 (317)
T 3o53_A 28 SLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPS 100 (317)
T ss_dssp HHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTT
T ss_pred HHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCC
Confidence 334444555555555555554444555555555555555555554332 555555555555555555332 2255
Q ss_pred CCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccc-
Q 002155 259 LQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSL- 337 (959)
Q Consensus 259 L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~- 337 (959)
|++|++++|++++..+. .+++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+..+
T Consensus 101 L~~L~l~~n~l~~~~~~---------------~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 165 (317)
T 3o53_A 101 IETLHAANNNISRVSCS---------------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (317)
T ss_dssp CCEEECCSSCCSEEEEC---------------CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred cCEEECCCCccCCcCcc---------------ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHh
Confidence 55555555555422111 12345556666666665666677788888888888888888777766
Q ss_pred cCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccc
Q 002155 338 SRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTH 417 (959)
Q Consensus 338 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 417 (959)
..+++|++|++++|.+++. + ....+++|++|++++|++++ +|..+..+++|+.|++++|+++ .+|..+..+++|++
T Consensus 166 ~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~ 241 (317)
T 3o53_A 166 ASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEH 241 (317)
T ss_dssp GGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCE
T ss_pred hccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCE
Confidence 4788999999999998865 2 23347889999999999884 4455888889999999999988 46777888888999
Q ss_pred cccCCcccc-CCCchhhhcccccceEeeccc-cccC
Q 002155 418 LDLSFNELD-GQLPSSLSNILNLVGLYLQHN-KLSG 451 (959)
Q Consensus 418 L~L~~N~l~-~~~~~~l~~l~~L~~L~L~~N-~l~~ 451 (959)
|++++|++. +.+|..+..+++|+.|+++++ .+++
T Consensus 242 L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 242 FDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp EECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred EEccCCCccCcCHHHHHhccccceEEECCCchhccC
Confidence 999999887 667788888888888888743 3443
No 319
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=3.9e-28 Score=284.31 Aligned_cols=184 Identities=17% Similarity=0.091 Sum_probs=129.2
Q ss_pred eccCCCeEEEEEEc-CCCCEEEEEEcccc----------chhhHHHHHHHHHHHhcC-CCCceeccccceecCCceEEEE
Q 002155 687 IGDGGFGTVYKAAL-PDGKTVAVKKLSQA----------KTQGHREFTAEMETLGKV-KHQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 687 lg~G~~g~V~~~~~-~~~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 754 (959)
.+.|++|.+..++. .-|+.||||++... .....++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 55666776665542 25889999998642 123346789999999999 6999999999999999999999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccccccc
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISA 834 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 834 (959)
||++|++|.+++.... +++.. +|+.||+.||+|+| +.|||||||||+|||++++|++||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~~~~----~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE----EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHTTC----CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHhCC----CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 9999999999998754 34443 58999999999999 89999999999999999999999999999987643
Q ss_pred ccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 002155 835 CETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882 (959)
Q Consensus 835 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 882 (959)
.. ......+||++|||||++.+ .+..++|+||+|++.+++.++..+
T Consensus 392 ~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 392 DC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 22 22344679999999999875 467789999999998887665444
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=4.7e-27 Score=271.66 Aligned_cols=244 Identities=20% Similarity=0.180 Sum_probs=156.9
Q ss_pred cccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEE
Q 002155 316 CVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLN 395 (959)
Q Consensus 316 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 395 (959)
+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|+.|+|++|.+++.. ..++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEE
Confidence 3456666666666666666666666666666666666664443 566666666666666665322 225666666
Q ss_pred ccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCcccccc-chhhhhhceeccCCcc
Q 002155 396 LTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFS-NSAAWKIATMNMSNNL 474 (959)
Q Consensus 396 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~-~~~~~~l~~L~ls~N~ 474 (959)
+++|.+++..+.. +++|++|+|++|.+++..|..+..+++|+.|+|++|.++++++..|. .+. .|+.|+|++|.
T Consensus 106 L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~--~L~~L~Ls~N~ 180 (487)
T 3oja_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSD--TLEHLNLQYNF 180 (487)
T ss_dssp CCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTT--TCCEEECTTSC
T ss_pred CcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCC--cccEEecCCCc
Confidence 6666666544432 35566666666666665566666666666666666666665444433 222 56666666666
Q ss_pred cCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCc-ccC-C
Q 002155 475 FDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLE-GMV-P 552 (959)
Q Consensus 475 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~-~ 552 (959)
+++.. .+..+++|+.|+|++|++++ +|+.+..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++. +.+ .
T Consensus 181 l~~~~--~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 181 IYDVK--GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCEEE--CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred ccccc--ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 66442 23357888888888888885 55558888888888888888885 6777888888888888888887 222 2
Q ss_pred CCcccCCCcccccc-------CCCCCCCCC
Q 002155 553 RSGICQNLSKISLT-------GNKDLCGKI 575 (959)
Q Consensus 553 ~~~~~~~l~~l~l~-------~N~~~c~~~ 575 (959)
....+..+..+.+. +|++.|.++
T Consensus 257 ~~~~l~~L~~l~~~~~~~~~~~~~~~c~~~ 286 (487)
T 3oja_A 257 FFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286 (487)
T ss_dssp HHTTCHHHHHHHHHHHHHHTSSSSCCCSST
T ss_pred HHHhCCCCcEEeccccccccCCCcccccCC
Confidence 22334556666665 788877653
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.4e-26 Score=267.79 Aligned_cols=192 Identities=23% Similarity=0.233 Sum_probs=102.0
Q ss_pred CCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccC
Q 002155 67 MLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDS 146 (959)
Q Consensus 67 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~ 146 (959)
+|++|+|++|.+++.+|..|..+++|++|+|++|.+++.++ |..+++|++|+|++|.+.+..+. .+|++|++++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L~L~~ 108 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLHAAN 108 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEEECCS
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEEECcC
Confidence 45555555555544444444455555555555555444333 44455555555555544433221 3455555555
Q ss_pred CccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCcccc-CCCCCCEEEccCCcCCccC
Q 002155 147 NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIG-NLSALSVLDLNSNLFDGII 225 (959)
Q Consensus 147 n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~N~i~~~~ 225 (959)
|++++..+. .+++|+.|++++|.+++..|..|+++++|+.|+|++|.+++..|..+. .+++|++|+|++|.|++..
T Consensus 109 N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~ 185 (487)
T 3oja_A 109 NNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK 185 (487)
T ss_dssp SCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE
T ss_pred CcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc
Confidence 555544332 234555556666655555555566666666666666666655555554 5666666666666666442
Q ss_pred CccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 226 PYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 226 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+ +..+++|++|+|++|++++++| .|..+++|+.|+|++|.++
T Consensus 186 ~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 186 G--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp C--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC
T ss_pred c--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCc
Confidence 2 2345666666666666665433 3556666666666666554
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=6.3e-25 Score=234.96 Aligned_cols=207 Identities=26% Similarity=0.283 Sum_probs=138.3
Q ss_pred CCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCC-cccEEecc
Q 002155 67 MLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL-PLMVLDLD 145 (959)
Q Consensus 67 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~-~L~~L~ls 145 (959)
+|++|+|++|++++..+..|..+++|++|++++|+++++.+..|.++++|++|+|++|.+.+..+..+..+ +|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555554444445555555555555555554444455555555555555555554444444444 35555556
Q ss_pred CCccccccCcccccccceeEEEccccccccc-cCccccCCcCCceEeccCCcccccCCccccCCCCCC----EEEccCCc
Q 002155 146 SNNFTGIIPVSIWNSETLMEFSAANNLLEGS-LPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALS----VLDLNSNL 220 (959)
Q Consensus 146 ~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~----~L~L~~N~ 220 (959)
+|++++..+..+..+++|++|++++|.+++. +|..|.++++|++|+|++|++++..+..|..+.+|+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 6666655555666777777777777777653 577888888888888888888877667777766666 88888888
Q ss_pred CCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCC
Q 002155 221 FDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIP 274 (959)
Q Consensus 221 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 274 (959)
++++.+..+.. .+|++|+|++|++++..+..|..+++|+.|+|++|.+.+..+
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 88666655544 478999999999888777778888999999999998876544
No 323
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.3e-24 Score=233.53 Aligned_cols=206 Identities=27% Similarity=0.236 Sum_probs=168.8
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCccccc
Q 002155 337 LSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELT 416 (959)
Q Consensus 337 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 416 (959)
+..+++++++++++|.++. +|..+. ++++.|++++|.+++..+..|..+++|++|+|++|.|++..+ ...+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 5677888888888888884 444432 578888888888887777888888888888888888885433 26788888
Q ss_pred ccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeecc
Q 002155 417 HLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHE 496 (959)
Q Consensus 417 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 496 (959)
+|++++|+++ .+|..+..+++|+.|++++|+|++++ |..|.++++|++|+|++
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~--------------------------~~~~~~l~~L~~L~L~~ 133 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLP--------------------------LGALRGLGELQELYLKG 133 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCC--------------------------SSTTTTCTTCCEEECTT
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccC--------------------------HHHHcCCCCCCEEECCC
Confidence 8888888887 67777888888888888888877544 34566788899999999
Q ss_pred ccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCCCC
Q 002155 497 NKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 497 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~ 574 (959)
|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+++.+++.......++.+++.+|||.|+|
T Consensus 134 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 999977777788899999999999999977777788899999999999999988887777788999999999999964
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=2.4e-24 Score=230.44 Aligned_cols=228 Identities=24% Similarity=0.241 Sum_probs=166.3
Q ss_pred eecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCccc
Q 002155 298 FDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQL 377 (959)
Q Consensus 298 l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 377 (959)
++.++..+. .+|..+. ++++.|++++|++++..+..|.++++|++|++++|++++..+..|..+++|+.|++++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 344444444 3455443 4688888888888877777888888888888888888877777888888888888888888
Q ss_pred CCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCC-CchhhhcccccceEeeccccccCCcccc
Q 002155 378 TGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQ-LPSSLSNILNLVGLYLQHNKLSGPVDEL 456 (959)
Q Consensus 378 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 456 (959)
++..+..|..+++|++|++++|++.+..+..+.++++|++|++++|++++. +|..+..+++|+.|++++|+++++++..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 877777888888888888888888877776788888888888888888753 5788888888888888888887665544
Q ss_pred ccchhhhhhceeccCCcccCCCCCccccCccccc-eeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCC
Q 002155 457 FSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLT-NLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLS 535 (959)
Q Consensus 457 ~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 535 (959)
|.... .++.|. .|++++|++++..+..+ ...+|++|+|++|++++..+..+..++
T Consensus 169 ~~~l~-----------------------~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~ 224 (276)
T 2z62_A 169 LRVLH-----------------------QMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLT 224 (276)
T ss_dssp GHHHH-----------------------TCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCC
T ss_pred hhhhh-----------------------hccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccc
Confidence 43221 122222 67788888774444433 345788888888888766666667777
Q ss_pred CccEEecccCcCcccCC
Q 002155 536 NLLYLSLAENRLEGMVP 552 (959)
Q Consensus 536 ~L~~L~l~~N~l~~~~~ 552 (959)
+|+.|++++|++.+..+
T Consensus 225 ~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 225 SLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SCCEEECCSSCBCCCTT
T ss_pred cccEEEccCCcccccCC
Confidence 77777777777765544
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=2.7e-27 Score=283.22 Aligned_cols=377 Identities=15% Similarity=0.113 Sum_probs=208.2
Q ss_pred cccEEeccCCccccccCcccc-cccceeEEEcccc-ccccc-cCccccCCcCCceEeccCCcccccCCcccc----CCCC
Q 002155 138 PLMVLDLDSNNFTGIIPVSIW-NSETLMEFSAANN-LLEGS-LPYEVGNAAALERLVLTNNMLKGHLPKEIG----NLSA 210 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~p~~~~-~~~~L~~L~l~~n-~l~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~----~l~~ 210 (959)
+|++|++++|.+++..+..+. .+++|++|++++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~ 185 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTS 185 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCc
Confidence 466666666666655555554 5677777777777 45432 344445788888888888887765544443 5668
Q ss_pred CCEEEccCCc--CCc-cCCccccCCCCCCEEEcccc-cCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCC
Q 002155 211 LSVLDLNSNL--FDG-IIPYELGDCISLTTLDLGNN-NLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANM 286 (959)
Q Consensus 211 L~~L~L~~N~--i~~-~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~ 286 (959)
|+.|++++|. +.. .++..+..+++|++|+|++| .+++ ++..+..+++|+.|+++.+..
T Consensus 186 L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~----------------- 247 (594)
T 2p1m_B 186 LVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTA----------------- 247 (594)
T ss_dssp CCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCC-----------------
T ss_pred CcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccC-----------------
Confidence 8888888886 221 11222345688899998888 4443 677788888888888776532
Q ss_pred CCccccccccceecCCCcCCCCCCcccCCcccccEE-EccCCcCcccCCccccCCCCCCEEEccCCCCCCCC-CCCcCCC
Q 002155 287 PDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDL-LLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPI-PSEFGDS 364 (959)
Q Consensus 287 ~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L-~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l 364 (959)
+++.|.+.+ ++..+.++++|+.| .+.+... ..++..+..+++|++|++++|.++... ...+..+
T Consensus 248 ------------~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~ 313 (594)
T 2p1m_B 248 ------------EVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQC 313 (594)
T ss_dssp ------------CCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTC
T ss_pred ------------ccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcC
Confidence 111122221 22344555666665 2322221 233444456778888888888765321 1224567
Q ss_pred CcceEEEeeCcccCCc-cccccccCCCCcEEEccC---------CcCCCCCCCccC-CcccccccccCCccccCCCchhh
Q 002155 365 IKLQGLYLGNNQLTGS-IPWSLGSLGGLVKLNLTG---------NKLSGKVPTSFG-NLKELTHLDLSFNELDGQLPSSL 433 (959)
Q Consensus 365 ~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~---------N~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~l 433 (959)
++|+.|++++| +... .+.....+++|++|++.+ +.+++.....+. ++++|++|+++.|.+++..+..+
T Consensus 314 ~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 314 PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 78888888877 4322 222233577888888733 344322222222 36777777777777775544445
Q ss_pred h-cccccceEeec--c----ccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcC
Q 002155 434 S-NILNLVGLYLQ--H----NKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPD 506 (959)
Q Consensus 434 ~-~l~~L~~L~L~--~----N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 506 (959)
. .+++|+.|+++ + |.++..+.+. .++..+..+++|+.|+|++ .+++..+..
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~---------------------~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDI---------------------GFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHH---------------------HHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhh---------------------HHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 4 47788888887 3 4454332110 0011123344555555544 343333333
Q ss_pred CcC-CCCCcEEeCCCCcCCCCCCccc-cCCCCccEEecccCcCcccCC--CCcccCCCccccccCCC
Q 002155 507 LGN-LMQLEYLDVSRNRLCGQIPETM-CSLSNLLYLSLAENRLEGMVP--RSGICQNLSKISLTGNK 569 (959)
Q Consensus 507 ~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~--~~~~~~~l~~l~l~~N~ 569 (959)
++. +++|++|+|++|.+++..+..+ ..+++|++|++++|+++.... ....+++|+.+++.+|+
T Consensus 451 l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 333 4555555555555543333333 345555555555555532211 11224455555555543
No 326
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=1.2e-27 Score=286.31 Aligned_cols=440 Identities=16% Similarity=0.128 Sum_probs=230.3
Q ss_pred cEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCC---CCCcc------------cCCCCCCcEEEccCccccccCCcc
Q 002155 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSG---SIPRE------------LCTSESLEEIDLDGNLLTGTIEGV 109 (959)
Q Consensus 45 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~---~~p~~------------~~~l~~L~~L~L~~n~l~~~~~~~ 109 (959)
+.++++++... ..+..+..+++|++|+|++|.... ..|.. +..+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 45666655433 223346778889999999875321 22222 234667777888777777655555
Q ss_pred cc-cCCCCceeeeccc-ccccc-cCcccC-CCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCc
Q 002155 110 FE-KCSNLSQLVIFRN-HIYGS-IPEYLS-KLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAA 185 (959)
Q Consensus 110 ~~-~l~~L~~L~L~~n-~~~~~-~p~~~~-~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 185 (959)
+. .+++|++|+|++| .+... ++.... ..+|++|++++|.+++..+..+.. ....++
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~--------------------~~~~~~ 184 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSH--------------------FPDTYT 184 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGG--------------------SCTTCC
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHH--------------------HhhcCC
Confidence 54 5777777777777 33321 222222 224666666666655443333221 112344
Q ss_pred CCceEeccCCc--ccc-cCCccccCCCCCCEEEccCC-cCCccCCccccCCCCCCEEEcccc-------cCCCCCchhhh
Q 002155 186 ALERLVLTNNM--LKG-HLPKEIGNLSALSVLDLNSN-LFDGIIPYELGDCISLTTLDLGNN-------NLSGLIPEKIA 254 (959)
Q Consensus 186 ~L~~L~L~~n~--i~~-~~~~~~~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~L~~N-------~l~~~~~~~~~ 254 (959)
+|++|++++|. +.. .++..+..+++|++|+|++| .+. .++..+..+++|++|+++.+ .+.+. +..+.
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l-~~~l~ 262 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGL-SVALS 262 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHH-HHHHH
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHH-HHHHh
Confidence 55555555554 111 01111223455555555555 233 24445555555665553332 22322 33455
Q ss_pred cccCCCeeE-cccccCCCCCCCCCcchhhccCCCC-ccccccccceecCCCcCCCC-CCcccCCcccccEEEccCCcCcc
Q 002155 255 DLAQLQCLV-LSHNNLSGPIPSKPSSYFRQANMPD-LSFIQHHGVFDLSYNRLSGP-IPEELGSCVVVVDLLLNNNMLSG 331 (959)
Q Consensus 255 ~l~~L~~L~-Ls~N~l~~~~~~~~~~~~~~~~~~~-l~~l~~L~~l~L~~n~l~~~-~p~~~~~~~~L~~L~L~~n~i~~ 331 (959)
++++|+.|. +.+... ..++. ...+.+|+.|++++|.+++. ++..+..+++|+.|++.+| ++.
T Consensus 263 ~~~~L~~Ls~~~~~~~--------------~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~ 327 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVP--------------AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IED 327 (594)
T ss_dssp TCTTCCEEECCBTCCG--------------GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHH
T ss_pred cCCCcccccCCcccch--------------hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCH
Confidence 556666552 221110 00011 11234455555555554321 1222456778888888877 442
Q ss_pred cC-CccccCCCCCCEEEccC---------CCCCCCCCCCc-CCCCcceEEEeeCcccCCccccccc-cCCCCcEEEcc--
Q 002155 332 KI-PGSLSRLTNLTTLDLSR---------NQLTGPIPSEF-GDSIKLQGLYLGNNQLTGSIPWSLG-SLGGLVKLNLT-- 397 (959)
Q Consensus 332 ~~-~~~~~~l~~L~~L~Ls~---------n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~-- 397 (959)
.. +.....+++|++|++++ +.+++.....+ ..+++|+.|.++.|.+++.....+. .+++|+.|+++
T Consensus 328 ~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~ 407 (594)
T 2p1m_B 328 AGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCII 407 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecc
Confidence 22 22233578888888844 33332111112 1356777777777777655444443 46777777777
Q ss_pred C----CcCCCCCC-----CccCCcccccccccCCccccCCCchhhhc-ccccceEeeccccccCCccccccchhhhhhce
Q 002155 398 G----NKLSGKVP-----TSFGNLKELTHLDLSFNELDGQLPSSLSN-ILNLVGLYLQHNKLSGPVDELFSNSAAWKIAT 467 (959)
Q Consensus 398 ~----N~i~~~~~-----~~~~~l~~L~~L~L~~N~l~~~~~~~l~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 467 (959)
+ |.++.... ..+.++++|++|++++ .+++..+..+.. +++|+.|++++|.+++
T Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~---------------- 470 (594)
T 2p1m_B 408 EPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSD---------------- 470 (594)
T ss_dssp STTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSH----------------
T ss_pred cCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcH----------------
Confidence 3 34442111 1134455666666655 444333333433 5566666666665532
Q ss_pred eccCCcccCCCCCccc-cCccccceeeeccccccccCCc-CCcCCCCCcEEeCCCCcCCCCCCccc-cCCCCccEEeccc
Q 002155 468 MNMSNNLFDGGLPRSL-GNLSYLTNLDLHENKFTGEIPP-DLGNLMQLEYLDVSRNRLCGQIPETM-CSLSNLLYLSLAE 544 (959)
Q Consensus 468 L~ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~ 544 (959)
..+..+ .++++|++|+|++|.+++..+. ....+++|++|++++|+++......+ ..+++|+...+..
T Consensus 471 ----------~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~ 540 (594)
T 2p1m_B 471 ----------LGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDE 540 (594)
T ss_dssp ----------HHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECS
T ss_pred ----------HHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecC
Confidence 222222 4577888889988888654443 34457888999999888754333334 4578887777776
Q ss_pred CcCcc
Q 002155 545 NRLEG 549 (959)
Q Consensus 545 N~l~~ 549 (959)
+.-..
T Consensus 541 ~~~~~ 545 (594)
T 2p1m_B 541 RGAPD 545 (594)
T ss_dssp SSCGG
T ss_pred CCccc
Confidence 65443
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.5e-23 Score=223.34 Aligned_cols=204 Identities=24% Similarity=0.232 Sum_probs=137.2
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeec
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIF 122 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 122 (959)
..+.++++++++. .+|..+. ++|++|+|++|++++..+..|..+++|++|++++|+++.+.++.|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 3556777777766 5665443 567777777777775555567777777777777777776666666666666666666
Q ss_pred ccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCC
Q 002155 123 RNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLP 202 (959)
Q Consensus 123 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 202 (959)
+|.+.+..+ ..|..+++|++|++++|.+++..+..|..+++|++|+|++|.|++..+
T Consensus 94 ~n~l~~~~~-----------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 150 (270)
T 2o6q_A 94 DNKLQALPI-----------------------GVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPK 150 (270)
T ss_dssp SSCCCCCCT-----------------------TTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCcCCcCCH-----------------------hHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCH
Confidence 666554443 344445555555555555554555556677777777777777776555
Q ss_pred ccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCC
Q 002155 203 KEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGP 272 (959)
Q Consensus 203 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 272 (959)
..|..+++|++|+|++|.++.+.+..|..+++|++|+|++|+++...+..|..+++|+.|+|++|.+...
T Consensus 151 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 151 GVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred hHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 5677777777777777777766666677777777777777777776666677777777777777777643
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.5e-23 Score=223.25 Aligned_cols=207 Identities=21% Similarity=0.228 Sum_probs=172.6
Q ss_pred CCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEecc
Q 002155 66 SMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLD 145 (959)
Q Consensus 66 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls 145 (959)
.+.+.+++++++++ .+|..+. ++|++|++++|+++++.+..|.++++|++|+|++|.+..
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------------- 75 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT----------------- 75 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSC-----------------
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCe-----------------
Confidence 35788999999998 6777664 689999999999998877788888888888777776653
Q ss_pred CCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccC
Q 002155 146 SNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGII 225 (959)
Q Consensus 146 ~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 225 (959)
+.+..|.++++|++|++++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.|+.+.
T Consensus 76 ------i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 76 ------LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp ------CCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred ------eChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 33344556777777777777777666778899999999999999999888888999999999999999999888
Q ss_pred CccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcC
Q 002155 226 PYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRL 305 (959)
Q Consensus 226 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l 305 (959)
+..|..+++|++|+|++|+++.+.+..|..+++|++|+|++|++++..+. .+..+.+|+.|++++|.+
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~------------~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEG------------AFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTT------------TTTTCTTCCEEECCSSCB
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHH------------HhccccCCCEEEecCCCe
Confidence 77899999999999999999998888899999999999999999853322 244567888999999998
Q ss_pred CCCCC
Q 002155 306 SGPIP 310 (959)
Q Consensus 306 ~~~~p 310 (959)
....+
T Consensus 218 ~c~c~ 222 (270)
T 2o6q_A 218 DCTCN 222 (270)
T ss_dssp CCSSS
T ss_pred eCCCc
Confidence 76543
No 329
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=4.1e-25 Score=257.31 Aligned_cols=184 Identities=16% Similarity=0.176 Sum_probs=145.5
Q ss_pred CCCCeeccCCCeEEEEEEcCCCCEEEEEEccccc--------hhhHHHHHHHHHHHhcCCCCceeccccceecCCceEEE
Q 002155 682 CKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAK--------TQGHREFTAEMETLGKVKHQNLVPLLGYCSFDEEKLLV 753 (959)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 753 (959)
...++||+|+||.||+|+. .++.+|+|+..... ....+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467899999999999965 57889999754321 11234578999999999999999777677777888999
Q ss_pred EEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccc
Q 002155 754 YEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLIS 833 (959)
Q Consensus 754 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 833 (959)
|||+++++|.+++.. +..++.|+++|++||| +.||+||||||+||+++. ++||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999875 4589999999999999 889999999999999998 99999999998775
Q ss_pred cccccc------cccccccccccCCCcCCC--CCCCCcCcchhHHHHHHHHHhCCCCC
Q 002155 834 ACETHV------STDIAGTFGYIPPEYGQS--GRSTTRGDVYSFGVILLELVTGKEPT 883 (959)
Q Consensus 834 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~ 883 (959)
...... .....||+.|||||++.. ..|+..+|+|+..+-..+-+.++.+|
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 432211 134579999999999876 56788899999999999888887775
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=4e-23 Score=221.76 Aligned_cols=203 Identities=21% Similarity=0.170 Sum_probs=149.2
Q ss_pred ccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccE
Q 002155 62 IGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMV 141 (959)
Q Consensus 62 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~ 141 (959)
++++++++++++++|+++ .+|..+. +++++|+|++|++++..+..|..+++|++|+|++|.+.+..+. -...+|++
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~~ 81 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGT 81 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCCE
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCCE
Confidence 556666666666666666 4554442 5666666666666666666666666666666666666644332 22234777
Q ss_pred EeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcC
Q 002155 142 LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLF 221 (959)
Q Consensus 142 L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i 221 (959)
|++++|+++ .+|..+..+++|++|++++|++++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 777777776 4566777788888888888888866667788888888888888888877777788888888999988888
Q ss_pred CccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 222 DGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 222 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+.+.+..|..+++|++|+|++|+++. +|..+..+.+|+.|+|++|.+.
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCcc
Confidence 87777777888889999999888884 4667777788888888888875
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=2.1e-23 Score=222.28 Aligned_cols=137 Identities=28% Similarity=0.311 Sum_probs=69.4
Q ss_pred cCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCc
Q 002155 313 LGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLV 392 (959)
Q Consensus 313 ~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 392 (959)
+..+++|+.|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|+
T Consensus 81 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 160 (272)
T 3rfs_A 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLT 160 (272)
T ss_dssp GTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCC
Confidence 34444455555555555544444455555555555555555544444455555555555555555544444445555555
Q ss_pred EEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccc
Q 002155 393 KLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKL 449 (959)
Q Consensus 393 ~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 449 (959)
+|++++|++++..+..|.++++|++|++++|++++..+..+..+++|+.|++++|++
T Consensus 161 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (272)
T 3rfs_A 161 ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 217 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCc
Confidence 555555555544444445555555555555555544444444444454444444444
No 332
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.4e-23 Score=223.78 Aligned_cols=211 Identities=26% Similarity=0.272 Sum_probs=130.2
Q ss_pred ccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCC
Q 002155 181 VGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQ 260 (959)
Q Consensus 181 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 260 (959)
+..+++|+.|++++|.++. + ..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++..+..|..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 3445555555555555552 1 2355555555555555555532 2455555555666655555555555555555555
Q ss_pred eeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCC
Q 002155 261 CLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRL 340 (959)
Q Consensus 261 ~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l 340 (959)
+|+|++|++++ ..+..++.+++|+.|++++|++++..+..|..+
T Consensus 113 ~L~L~~n~l~~------------------------------------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 156 (272)
T 3rfs_A 113 ELVLVENQLQS------------------------------------LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKL 156 (272)
T ss_dssp EEECTTSCCCC------------------------------------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred EEECCCCcCCc------------------------------------cCHHHhccCCCCCEEECCCCccCccCHHHhccC
Confidence 55555555431 223334455555555555555555556666777
Q ss_pred CCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCccccccccc
Q 002155 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420 (959)
Q Consensus 341 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 420 (959)
++|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|++|++++|.+.+ .+++|++|++
T Consensus 157 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~ 229 (272)
T 3rfs_A 157 TNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSE 229 (272)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHH
T ss_pred ccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHH
Confidence 777777777777776666667777777777777777776666667777777777777777653 2456777777
Q ss_pred CCccccCCCchhhhcccc
Q 002155 421 SFNELDGQLPSSLSNILN 438 (959)
Q Consensus 421 ~~N~l~~~~~~~l~~l~~ 438 (959)
+.|.+++.+|..++.+..
T Consensus 230 ~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 230 WINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp HHHHTGGGBBCTTSCBCG
T ss_pred HHHhCCCcccCcccccCC
Confidence 777777777777666554
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.5e-22 Score=211.36 Aligned_cols=205 Identities=17% Similarity=0.159 Sum_probs=120.1
Q ss_pred ccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCc-CCCCCCcccCCCCCCcEEEccC-ccccccCCc
Q 002155 31 SGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNF-LSGSIPRELCTSESLEEIDLDG-NLLTGTIEG 108 (959)
Q Consensus 31 ~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~ 108 (959)
.+.+|. +.. .|++|+|++|++.+..+..|.++++|++|+|++|+ +++..+..|..+++|++|++++ |+++++.+.
T Consensus 23 l~~ip~-~~~--~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~ 99 (239)
T 2xwt_C 23 IQRIPS-LPP--STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPD 99 (239)
T ss_dssp CSSCCC-CCT--TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTT
T ss_pred ccccCC-CCC--cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHH
Confidence 445555 333 56666666666664444456666666666666665 5544444566666666666666 666655556
Q ss_pred ccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCccccccccee---EEEcccc-ccccccCccccCC
Q 002155 109 VFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLM---EFSAANN-LLEGSLPYEVGNA 184 (959)
Q Consensus 109 ~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~---~L~l~~n-~l~~~~~~~~~~l 184 (959)
.|.++++|++|++++|.+.+ +|. +..+++|+ +|++++| .+++..+..|.++
T Consensus 100 ~f~~l~~L~~L~l~~n~l~~-lp~------------------------~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l 154 (239)
T 2xwt_C 100 ALKELPLLKFLGIFNTGLKM-FPD------------------------LTKVYSTDIFFILEITDNPYMTSIPVNAFQGL 154 (239)
T ss_dssp SEECCTTCCEEEEEEECCCS-CCC------------------------CTTCCBCCSEEEEEEESCTTCCEECTTTTTTT
T ss_pred HhCCCCCCCEEeCCCCCCcc-ccc------------------------cccccccccccEEECCCCcchhhcCcccccch
Confidence 66666666666666666554 333 33334443 5555555 5554444556666
Q ss_pred cCCc-eEeccCCcccccCCccccCCCCCCEEEccCCc-CCccCCccccCC-CCCCEEEcccccCCCCCchhhhcccCCCe
Q 002155 185 AALE-RLVLTNNMLKGHLPKEIGNLSALSVLDLNSNL-FDGIIPYELGDC-ISLTTLDLGNNNLSGLIPEKIADLAQLQC 261 (959)
Q Consensus 185 ~~L~-~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 261 (959)
++|+ +|++++|+++...+..|.. ++|+.|+|++|+ ++.+.+..|..+ ++|++|++++|+++.+.+. .+++|+.
T Consensus 155 ~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~ 230 (239)
T 2xwt_C 155 CNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKE 230 (239)
T ss_dssp BSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSE
T ss_pred hcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCce
Confidence 6666 6666666666333333333 666667777663 665556666666 6677777777776654333 4566666
Q ss_pred eEcccc
Q 002155 262 LVLSHN 267 (959)
Q Consensus 262 L~Ls~N 267 (959)
|+++++
T Consensus 231 L~l~~~ 236 (239)
T 2xwt_C 231 LIARNT 236 (239)
T ss_dssp EECTTC
T ss_pred eeccCc
Confidence 666654
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=5.7e-23 Score=223.56 Aligned_cols=225 Identities=21% Similarity=0.217 Sum_probs=156.1
Q ss_pred cccEEEccCCcCcccCCc---cccCCCCCCEEEccCCCCCCCCCCCc--CCCCcceEEEeeCcccCCccc----cccccC
Q 002155 318 VVVDLLLNNNMLSGKIPG---SLSRLTNLTTLDLSRNQLTGPIPSEF--GDSIKLQGLYLGNNQLTGSIP----WSLGSL 388 (959)
Q Consensus 318 ~L~~L~L~~n~i~~~~~~---~~~~l~~L~~L~Ls~n~l~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~l 388 (959)
.++.+.+.++.++..... .+..+++|++|++++|.+.+..|..+ ..+++|++|++++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 355666666665422111 12234678999999999888888877 888899999999999886544 344578
Q ss_pred CCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCC--C--chhhhcccccceEeeccccccCCcccc---ccchh
Q 002155 389 GGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQ--L--PSSLSNILNLVGLYLQHNKLSGPVDEL---FSNSA 461 (959)
Q Consensus 389 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--~~~l~~l~~L~~L~L~~N~l~~~~~~~---~~~~~ 461 (959)
++|++|+|++|++.+..+..|.++++|++|+|++|++.+. . +..+..+++|++|++++|+++.++... +...
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l- 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG- 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT-
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC-
Confidence 8999999999999888888888999999999999987642 1 233467888999999999887654431 2221
Q ss_pred hhhhceeccCCcccCCCCCccccCc---cccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCcc
Q 002155 462 AWKIATMNMSNNLFDGGLPRSLGNL---SYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLL 538 (959)
Q Consensus 462 ~~~l~~L~ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 538 (959)
.+|+.|++++|.+++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|+|++. |. +..+++|+
T Consensus 224 -~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 224 -VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp -CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred -CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 256666666666666656655555 47777777777776 5566554 5777777777777653 32 56667777
Q ss_pred EEecccCcCcc
Q 002155 539 YLSLAENRLEG 549 (959)
Q Consensus 539 ~L~l~~N~l~~ 549 (959)
.|++++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 77777776653
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.5e-22 Score=211.36 Aligned_cols=197 Identities=15% Similarity=0.162 Sum_probs=146.6
Q ss_pred CCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCcc-ccccCCcccccCCCCceeeecccccccccCcccCCCcccEEecc
Q 002155 67 MLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNL-LTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLD 145 (959)
Q Consensus 67 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls 145 (959)
+|++|+|++|++++..+..|..+++|++|++++|+ ++.+.+..|.++++|++|+ ++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~-----------------------l~ 88 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIE-----------------------IR 88 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEE-----------------------EE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEE-----------------------CC
Confidence 55666666666654444455555666666666664 5555555555555555555 45
Q ss_pred C-CccccccCcccccccceeEEEccccccccccCccccCCcCCc---eEeccCC-cccccCCccccCCCCCC-EEEccCC
Q 002155 146 S-NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALE---RLVLTNN-MLKGHLPKEIGNLSALS-VLDLNSN 219 (959)
Q Consensus 146 ~-n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~---~L~L~~n-~i~~~~~~~~~~l~~L~-~L~L~~N 219 (959)
+ |+++++.+..|.++++|++|++++|.+++ +|. |..+++|+ +|++++| .+++..+..|.++++|+ +|++++|
T Consensus 89 ~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n 166 (239)
T 2xwt_C 89 NTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN 166 (239)
T ss_dssp EETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSC
T ss_pred CCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCC
Confidence 4 55555566677788888888888888884 665 88999998 9999999 99987778899999999 9999999
Q ss_pred cCCccCCccccCCCCCCEEEccccc-CCCCCchhhhcc-cCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccc
Q 002155 220 LFDGIIPYELGDCISLTTLDLGNNN-LSGLIPEKIADL-AQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGV 297 (959)
Q Consensus 220 ~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~ 297 (959)
.++.+.+..|.. ++|++|+|++|+ ++.+.+..|..+ ++|+.|++++|++++..+. .+.+++.
T Consensus 167 ~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---------------~~~~L~~ 230 (239)
T 2xwt_C 167 GFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---------------GLEHLKE 230 (239)
T ss_dssp CCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---------------TCTTCSE
T ss_pred CCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---------------HhccCce
Confidence 999666656666 899999999995 998888899999 9999999999999742221 3456777
Q ss_pred eecCCCc
Q 002155 298 FDLSYNR 304 (959)
Q Consensus 298 l~L~~n~ 304 (959)
|+++++.
T Consensus 231 L~l~~~~ 237 (239)
T 2xwt_C 231 LIARNTW 237 (239)
T ss_dssp EECTTC-
T ss_pred eeccCcc
Confidence 8887653
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=2.8e-24 Score=239.38 Aligned_cols=128 Identities=20% Similarity=0.194 Sum_probs=58.8
Q ss_pred eccCCccccccCcccccccceeEEEccccccccccC----ccccCCc-CCceEeccCCcccccCCccccCC-----CCCC
Q 002155 143 DLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLP----YEVGNAA-ALERLVLTNNMLKGHLPKEIGNL-----SALS 212 (959)
Q Consensus 143 ~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~----~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l-----~~L~ 212 (959)
++++|++++.+|..+...++|++|++++|.+++..+ ..|.+++ +|++|+|++|.|++..+..|..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 344444444444333333334444444444443333 3444444 55555555555554444444443 5555
Q ss_pred EEEccCCcCCccCCccccC----C-CCCCEEEcccccCCCCCchhhhc-----ccCCCeeEcccccCC
Q 002155 213 VLDLNSNLFDGIIPYELGD----C-ISLTTLDLGNNNLSGLIPEKIAD-----LAQLQCLVLSHNNLS 270 (959)
Q Consensus 213 ~L~L~~N~i~~~~~~~~~~----l-~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~ 270 (959)
+|+|++|.++...+..+.. + ++|++|+|++|++++..+..+.. .++|++|+|++|.++
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred EEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 5555555555444433222 2 45555555555555444433332 135555555555443
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=5.6e-24 Score=239.47 Aligned_cols=241 Identities=20% Similarity=0.233 Sum_probs=193.8
Q ss_pred cCCCcccCCCccccEEecCCCccccc----CCcCccCCCCCcEEEcCCCcC---CCCCCccc-------CCCCCCcEEEc
Q 002155 32 GSLPSWLGNWNQMESLLLSSNQFIGK----IPPEIGNCSMLKSISLSNNFL---SGSIPREL-------CTSESLEEIDL 97 (959)
Q Consensus 32 ~~lp~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~n~l---~~~~p~~~-------~~l~~L~~L~L 97 (959)
..++..+..++.|++|+|++|++... ++..+..+++|++|+|++|.+ ++.+|..+ ..+++|++|+|
T Consensus 22 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~L 101 (386)
T 2ca6_A 22 KSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 101 (386)
T ss_dssp HTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEEC
Confidence 46778888889999999999999865 445588999999999999644 44556555 78899999999
Q ss_pred cCccccc----cCCcccccCCCCceeeecccccccccCcccCC--------------CcccEEeccCCccc-cccC---c
Q 002155 98 DGNLLTG----TIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSK--------------LPLMVLDLDSNNFT-GIIP---V 155 (959)
Q Consensus 98 ~~n~l~~----~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~--------------~~L~~L~ls~n~l~-~~~p---~ 155 (959)
++|.++. .++..+..+++|++|+|++|.+....+..+.. .+|++|++++|+++ ...| .
T Consensus 102 s~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 181 (386)
T 2ca6_A 102 SDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 181 (386)
T ss_dssp CSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHH
Confidence 9999997 46778899999999999999997554443332 46999999999997 3444 3
Q ss_pred ccccccceeEEEcccccccc-----ccCccccCCcCCceEeccCCccc----ccCCccccCCCCCCEEEccCCcCCcc--
Q 002155 156 SIWNSETLMEFSAANNLLEG-----SLPYEVGNAAALERLVLTNNMLK----GHLPKEIGNLSALSVLDLNSNLFDGI-- 224 (959)
Q Consensus 156 ~~~~~~~L~~L~l~~n~l~~-----~~~~~~~~l~~L~~L~L~~n~i~----~~~~~~~~~l~~L~~L~L~~N~i~~~-- 224 (959)
.+..+++|++|++++|.++. ..|..+..+++|++|+|++|.|+ ..+|..+..+++|++|+|++|.|+..
T Consensus 182 ~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 261 (386)
T 2ca6_A 182 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGA 261 (386)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHH
T ss_pred HHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhH
Confidence 56678899999999998873 34447888999999999999995 46778888999999999999999865
Q ss_pred --CCcccc--CCCCCCEEEcccccCCC----CCchhh-hcccCCCeeEcccccCCCC
Q 002155 225 --IPYELG--DCISLTTLDLGNNNLSG----LIPEKI-ADLAQLQCLVLSHNNLSGP 272 (959)
Q Consensus 225 --~~~~~~--~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N~l~~~ 272 (959)
++..+. .+++|++|+|++|+++. .+|..+ .++++|+.|+|++|++++.
T Consensus 262 ~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 262 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 456663 38899999999999987 356666 6689999999999988753
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=6.7e-24 Score=236.31 Aligned_cols=224 Identities=21% Similarity=0.206 Sum_probs=130.1
Q ss_pred EecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCC----cccCCCC-CCcEEEccCccccccCCcccccC-----CCC
Q 002155 47 LLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIP----RELCTSE-SLEEIDLDGNLLTGTIEGVFEKC-----SNL 116 (959)
Q Consensus 47 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l-----~~L 116 (959)
++|++|++.+.+|..+...++|++|||++|.+++..+ ..|..++ +|++|+|++|++++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566666666666655555557777777777665444 5566666 67777777776666555555554 666
Q ss_pred ceeeecccccccccCcccCC------CcccEEeccCCccccccCccccc-----ccceeEEEccccccccc----cCccc
Q 002155 117 SQLVIFRNHIYGSIPEYLSK------LPLMVLDLDSNNFTGIIPVSIWN-----SETLMEFSAANNLLEGS----LPYEV 181 (959)
Q Consensus 117 ~~L~L~~n~~~~~~p~~~~~------~~L~~L~ls~n~l~~~~p~~~~~-----~~~L~~L~l~~n~l~~~----~~~~~ 181 (959)
++|+|++|.+.+..+..+.. .+|++|++++|++++..+..+.. .++|++|++++|.+++. ++..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 66666666665544442221 24666666666666554444332 24566666666666532 23333
Q ss_pred cCCc-CCceEeccCCcccccCCcccc----CC-CCCCEEEccCCcCCcc----CCccccC-CCCCCEEEcccccCCCCCc
Q 002155 182 GNAA-ALERLVLTNNMLKGHLPKEIG----NL-SALSVLDLNSNLFDGI----IPYELGD-CISLTTLDLGNNNLSGLIP 250 (959)
Q Consensus 182 ~~l~-~L~~L~L~~n~i~~~~~~~~~----~l-~~L~~L~L~~N~i~~~----~~~~~~~-l~~L~~L~L~~N~l~~~~~ 250 (959)
..++ +|++|+|++|+|++..+..+. .+ ++|++|+|++|.|+.. ++..+.. .++|++|+|++|++++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 4444 677777777777655544333 33 4677777777776642 3334444 3467777777777765544
Q ss_pred hh----hhcccCCCeeEcccccCC
Q 002155 251 EK----IADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 251 ~~----~~~l~~L~~L~Ls~N~l~ 270 (959)
.. +..+++|+.|+|++|.+.
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~ 266 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVK 266 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHT
T ss_pred HHHHHHHhcCCCccEEEeccCCcc
Confidence 32 345566777777766643
No 339
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1e-21 Score=206.57 Aligned_cols=184 Identities=23% Similarity=0.254 Sum_probs=146.7
Q ss_pred CCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCccccccccc
Q 002155 341 TNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDL 420 (959)
Q Consensus 341 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 420 (959)
...++++++++.++. +|..+. ++++.|++++|.+++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 356788888888884 454443 57888888888888777777888888888888888888777777888888888888
Q ss_pred CCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeecccccc
Q 002155 421 SFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFT 500 (959)
Q Consensus 421 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 500 (959)
++|++++..+..|..+++|+.|+|++|+|+++++ ..|..+++|++|+|++|+++
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--------------------------~~~~~l~~L~~L~Ls~N~l~ 144 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPS--------------------------GVFDRLTKLKELRLNTNQLQ 144 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT--------------------------TTTTTCTTCCEEECCSSCCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcCh--------------------------hHhccCCcccEEECcCCcCC
Confidence 8888887666777788888888888877775443 34556788999999999998
Q ss_pred ccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCC
Q 002155 501 GEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR 553 (959)
Q Consensus 501 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 553 (959)
+..+..|..+++|++|+|++|+|++..+..+..+++|+.|++++|++.+....
T Consensus 145 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 145 SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred ccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCccc
Confidence 66666788899999999999999987777888899999999999999877444
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=2.9e-22 Score=217.40 Aligned_cols=194 Identities=19% Similarity=0.280 Sum_probs=132.2
Q ss_pred CCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCce
Q 002155 39 GNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118 (959)
Q Consensus 39 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 118 (959)
.++++|++|++++|++. .+| .+..+++|++|+|++|++++ ++. +..+++|++|++++|++++. ..+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 45666777777777766 344 46677777777777777763 333 66677777777777776653 24566666666
Q ss_pred eeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCccc
Q 002155 119 LVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLK 198 (959)
Q Consensus 119 L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 198 (959)
|++++|.+. +.. .+..+++|++|++++|.+++..+ +..+++|++|+|++|.++
T Consensus 112 L~l~~n~l~-----------------------~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 112 LDLTSTQIT-----------------------DVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVS 164 (308)
T ss_dssp EECTTSCCC-----------------------CCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred EECCCCCCC-----------------------Cch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCC
Confidence 666555554 321 15556666666666666653322 777788888888888887
Q ss_pred ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCC
Q 002155 199 GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSG 271 (959)
Q Consensus 199 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 271 (959)
+.. . +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++.. .+..+++|+.|+|++|++++
T Consensus 165 ~~~-~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 165 DLT-P-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCG-G-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CCh-h-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 533 3 7888888888888888875443 778888888888888888664 37888888888888888763
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=2.3e-22 Score=218.74 Aligned_cols=85 Identities=27% Similarity=0.307 Sum_probs=49.6
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCCcCCC---CcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcc
Q 002155 337 LSRLTNLTTLDLSRNQLTGPIPSEFGDS---IKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLK 413 (959)
Q Consensus 337 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 413 (959)
+..+++|++|+|++|++++..|..+..+ ++|++|++++|+++ .+|..+. ++|++|+|++|+|++. |. +..++
T Consensus 220 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~ 294 (310)
T 4glp_A 220 AAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELP 294 (310)
T ss_dssp HHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCC
T ss_pred HhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCC
Confidence 4556677777777777766555555444 46666666666666 3444442 4666666666666543 22 45555
Q ss_pred cccccccCCcccc
Q 002155 414 ELTHLDLSFNELD 426 (959)
Q Consensus 414 ~L~~L~L~~N~l~ 426 (959)
+|++|+|++|+++
T Consensus 295 ~L~~L~L~~N~l~ 307 (310)
T 4glp_A 295 EVDNLTLDGNPFL 307 (310)
T ss_dssp CCSCEECSSTTTS
T ss_pred CccEEECcCCCCC
Confidence 6666666666654
No 342
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=8.9e-23 Score=225.21 Aligned_cols=254 Identities=15% Similarity=0.228 Sum_probs=200.4
Q ss_pred ccccEEecCCCcccccCCcCccCC--CCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCcccccc-CCcccccCCCCce
Q 002155 42 NQMESLLLSSNQFIGKIPPEIGNC--SMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGT-IEGVFEKCSNLSQ 118 (959)
Q Consensus 42 ~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~ 118 (959)
..++.|+++++++. |..+..+ ++++.|++++|.+.+.++. +..+++|++|++++|.+++. .+..+..+++|++
T Consensus 47 ~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 47 SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 34889999999876 5667777 8999999999999976665 66799999999999999865 7788999999999
Q ss_pred eeecccccccccCcccCCC-cccEEeccCC-ccccc-cCcccccccceeEEEcccc-ccccc-cCccccCCc-CCceEec
Q 002155 119 LVIFRNHIYGSIPEYLSKL-PLMVLDLDSN-NFTGI-IPVSIWNSETLMEFSAANN-LLEGS-LPYEVGNAA-ALERLVL 192 (959)
Q Consensus 119 L~L~~n~~~~~~p~~~~~~-~L~~L~ls~n-~l~~~-~p~~~~~~~~L~~L~l~~n-~l~~~-~~~~~~~l~-~L~~L~L 192 (959)
|+|++|.+.+..|..+... +|++|++++| .+++. .+..+..+++|++|++++| .+++. ++..+..++ +|++|+|
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 9999999887777777666 5999999999 67763 6666888999999999999 88854 577788899 9999999
Q ss_pred cCC--ccc-ccCCccccCCCCCCEEEccCCc-CCccCCccccCCCCCCEEEccccc-CCCCCchhhhcccCCCeeEcccc
Q 002155 193 TNN--MLK-GHLPKEIGNLSALSVLDLNSNL-FDGIIPYELGDCISLTTLDLGNNN-LSGLIPEKIADLAQLQCLVLSHN 267 (959)
Q Consensus 193 ~~n--~i~-~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N 267 (959)
++| .++ +.++..+..+++|++|++++|. ++...+..+..+++|++|++++|. +.......++.+++|+.|++++|
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 999 454 3566777889999999999998 776777788899999999999985 33222236788899999999988
Q ss_pred cCCCCCCCCCcchhhccCCCCcccc-ccccceecCCCcCCCCCCcccCC
Q 002155 268 NLSGPIPSKPSSYFRQANMPDLSFI-QHHGVFDLSYNRLSGPIPEELGS 315 (959)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~l~~l-~~L~~l~L~~n~l~~~~p~~~~~ 315 (959)
++. ..+..+ .++..|++++|.+++..|..++.
T Consensus 283 -i~~---------------~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 283 -VPD---------------GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp -SCT---------------TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred -cCH---------------HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 431 112222 33566777777777776666554
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=8.5e-22 Score=218.08 Aligned_cols=188 Identities=19% Similarity=0.110 Sum_probs=86.3
Q ss_pred cCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCC-cccCCCCCCcE-EEccCccccccCCcc
Q 002155 32 GSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIP-RELCTSESLEE-IDLDGNLLTGTIEGV 109 (959)
Q Consensus 32 ~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~-L~L~~n~l~~~~~~~ 109 (959)
+++|..+. +.+++|+|++|++....+.+|.++++|++|+|++|++.+.+| ..|.++++|++ +.+++|+++.+.++.
T Consensus 22 t~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~ 99 (350)
T 4ay9_X 22 TEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEA 99 (350)
T ss_dssp CSCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTS
T ss_pred CccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchh
Confidence 35555442 345555555555553233345555555555555555543333 34455555443 344445555555555
Q ss_pred cccCCCCceeeecccccccccCccc-CCCcccEEeccC-CccccccCccccccc-ceeEEEccccccccccCccccCCcC
Q 002155 110 FEKCSNLSQLVIFRNHIYGSIPEYL-SKLPLMVLDLDS-NNFTGIIPVSIWNSE-TLMEFSAANNLLEGSLPYEVGNAAA 186 (959)
Q Consensus 110 ~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~-n~l~~~~p~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~ 186 (959)
|..+++|++|++++|.+....+..+ ..+++..|++++ +++..+.+..|..+. .++.|++++|+|+ .+|.......+
T Consensus 100 f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~ 178 (350)
T 4ay9_X 100 FQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQ 178 (350)
T ss_dssp BCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEE
T ss_pred hhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccc
Confidence 5555555555555555554433322 222344555533 334433333444332 3444455555444 22222223334
Q ss_pred CceEeccC-CcccccCCccccCCCCCCEEEccCCcCC
Q 002155 187 LERLVLTN-NMLKGHLPKEIGNLSALSVLDLNSNLFD 222 (959)
Q Consensus 187 L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~N~i~ 222 (959)
|++|++++ |.++...+.+|.++++|++|+|++|+|+
T Consensus 179 L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 179 LDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp EEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred hhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 44444442 3344222234444444444444444444
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=7.5e-24 Score=238.44 Aligned_cols=255 Identities=21% Similarity=0.270 Sum_probs=160.9
Q ss_pred ccCccccCCcCCceEeccCCcccccCC----ccccCCCCCCEEEccCCcC---CccCCccc-------cCCCCCCEEEcc
Q 002155 176 SLPYEVGNAAALERLVLTNNMLKGHLP----KEIGNLSALSVLDLNSNLF---DGIIPYEL-------GDCISLTTLDLG 241 (959)
Q Consensus 176 ~~~~~~~~l~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~L~~N~i---~~~~~~~~-------~~l~~L~~L~L~ 241 (959)
.++..+..+++|++|+|++|.|++..+ ..+..+++|++|+|++|.+ ++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 344555566666666666666665433 3355666677777766433 33334333 566777777777
Q ss_pred cccCCC----CCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcc
Q 002155 242 NNNLSG----LIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCV 317 (959)
Q Consensus 242 ~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~ 317 (959)
+|+++. .++..+..+++|++|+|++|.++...+..... .+..+ ..|.+.+ ..+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~--------~l~~l--------~~~~~~~-------~~~ 159 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--------ALQEL--------AVNKKAK-------NAP 159 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--------HHHHH--------HHHHHHH-------TCC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHH--------HHHHH--------hhhhhcc-------cCC
Confidence 777765 34556667777777777777654110000000 00000 0000000 004
Q ss_pred cccEEEccCCcCc-ccCC---ccccCCCCCCEEEccCCCCCC-----CCCCCcCCCCcceEEEeeCcccC----Cccccc
Q 002155 318 VVVDLLLNNNMLS-GKIP---GSLSRLTNLTTLDLSRNQLTG-----PIPSEFGDSIKLQGLYLGNNQLT----GSIPWS 384 (959)
Q Consensus 318 ~L~~L~L~~n~i~-~~~~---~~~~~l~~L~~L~Ls~n~l~~-----~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~ 384 (959)
+|+.|++++|+++ ...+ ..+..+++|++|++++|+++. ..+..+..+++|+.|+|++|.++ ..+|..
T Consensus 160 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~ 239 (386)
T 2ca6_A 160 PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239 (386)
T ss_dssp CCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred CCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH
Confidence 5556666666654 2233 456677888888888888772 34446777888888888888885 466777
Q ss_pred cccCCCCcEEEccCCcCCCC----CCCcc--CCcccccccccCCccccC----CCchhh-hcccccceEeeccccccCCc
Q 002155 385 LGSLGGLVKLNLTGNKLSGK----VPTSF--GNLKELTHLDLSFNELDG----QLPSSL-SNILNLVGLYLQHNKLSGPV 453 (959)
Q Consensus 385 ~~~l~~L~~L~L~~N~i~~~----~~~~~--~~l~~L~~L~L~~N~l~~----~~~~~l-~~l~~L~~L~L~~N~l~~~~ 453 (959)
+..+++|++|+|++|+|++. ++..+ +.+++|++|+|++|.+++ .+|..+ .++++|+.|++++|++++..
T Consensus 240 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 88888899999999988754 34555 347889999999999886 367666 66899999999999988765
No 345
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=1.2e-22 Score=224.25 Aligned_cols=149 Identities=14% Similarity=0.151 Sum_probs=64.9
Q ss_pred CcEEEcCCCcCCCCCCcccCCC--CCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEecc
Q 002155 68 LKSISLSNNFLSGSIPRELCTS--ESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLD 145 (959)
Q Consensus 68 L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls 145 (959)
++.|++++|.+. |..+..+ ++++.|++++|.+.+..+. +..+++|+ +|+++
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~-----------------------~L~L~ 101 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQ-----------------------HMDLS 101 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCC-----------------------EEECT
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCC-----------------------EEEcc
Confidence 556666666554 3344444 5555555555555543333 22334444 44444
Q ss_pred CCccccc-cCcccccccceeEEEccccccccccCccccCCcCCceEeccCC-ccccc-CCccccCCCCCCEEEccCC-cC
Q 002155 146 SNNFTGI-IPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNN-MLKGH-LPKEIGNLSALSVLDLNSN-LF 221 (959)
Q Consensus 146 ~n~l~~~-~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n-~i~~~-~~~~~~~l~~L~~L~L~~N-~i 221 (959)
+|++++. .|..+..+++|++|++++|.+++..+..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+
T Consensus 102 ~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l 181 (336)
T 2ast_B 102 NSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDF 181 (336)
T ss_dssp TCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTC
T ss_pred CCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCc
Confidence 4443332 3333333444444444444444334444444444444444444 33321 2333444444444444444 44
Q ss_pred Ccc-CCccccCCC-CCCEEEcccc
Q 002155 222 DGI-IPYELGDCI-SLTTLDLGNN 243 (959)
Q Consensus 222 ~~~-~~~~~~~l~-~L~~L~L~~N 243 (959)
++. ++..+..++ +|++|+|++|
T Consensus 182 ~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 182 TEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp CHHHHHHHHHHSCTTCCEEECCSC
T ss_pred ChHHHHHHHHhcccCCCEEEeCCC
Confidence 322 233344444 4444444444
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=1.9e-21 Score=210.87 Aligned_cols=194 Identities=22% Similarity=0.274 Sum_probs=148.3
Q ss_pred CccchhhhhhcCCcccCCCcccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEE
Q 002155 17 DLPILTFAAEKNQLSGSLPSWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEID 96 (959)
Q Consensus 17 ~~~~~~~~~~~~~~~~~lp~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 96 (959)
.++.++.++..++-+..+| .+..+++|++|+|++|++. .++. +..+++|++|+|++|++++ ++ .+..+++|++|+
T Consensus 39 ~l~~L~~L~l~~~~i~~l~-~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLD 113 (308)
T ss_dssp HHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEE
T ss_pred HcCCcCEEEeeCCCccCch-hhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEE
Confidence 4666777777777777787 6899999999999999998 4555 9999999999999999984 44 699999999999
Q ss_pred ccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccc
Q 002155 97 LDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGS 176 (959)
Q Consensus 97 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~ 176 (959)
+++|++++.. .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+++
T Consensus 114 l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~-------------------------l~~l~~L~~L~l~~n~l~~- 165 (308)
T 1h6u_A 114 LTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP-------------------------LAGLTNLQYLSIGNAQVSD- 165 (308)
T ss_dssp CTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG-------------------------GGGCTTCCEEECCSSCCCC-
T ss_pred CCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc-------------------------ccCCCCccEEEccCCcCCC-
Confidence 9999999754 38888888888888887764332 3444555555555555553
Q ss_pred cCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCC
Q 002155 177 LPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGL 248 (959)
Q Consensus 177 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 248 (959)
++. +..+++|+.|+|++|.+++..+ +..+++|++|+|++|.+++.. .+..+++|++|+|++|+++..
T Consensus 166 ~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 166 LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECC
T ss_pred Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecC
Confidence 222 6677777777777777775332 777888888888888887544 377788888888888888754
No 347
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=6.3e-21 Score=200.53 Aligned_cols=180 Identities=18% Similarity=0.148 Sum_probs=127.1
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeec
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIF 122 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 122 (959)
..++++++++++. .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3556677777666 5665544 467777777777776666666777777777777777776666666666666666666
Q ss_pred ccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCC
Q 002155 123 RNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLP 202 (959)
Q Consensus 123 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 202 (959)
+|.+.+. .+..|..+++|++|++++|++++..+..|..+++|++|+|++|+|++..+
T Consensus 92 ~n~l~~~-----------------------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 148 (251)
T 3m19_A 92 NNQLASL-----------------------PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148 (251)
T ss_dssp TSCCCCC-----------------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCccccc-----------------------ChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCH
Confidence 5555543 34444555556666666666654555557778888888888888887666
Q ss_pred ccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCC
Q 002155 203 KEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGL 248 (959)
Q Consensus 203 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 248 (959)
..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++...
T Consensus 149 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 6788888889999999988877777888888899999999988754
No 348
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2e-22 Score=214.73 Aligned_cols=152 Identities=16% Similarity=0.115 Sum_probs=121.5
Q ss_pred HHHHHHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccch------------------hhHHHHHHHHHHHhcCC
Q 002155 672 VHILEATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT------------------QGHREFTAEMETLGKVK 733 (959)
Q Consensus 672 ~~~~~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~ 733 (959)
..+......|.+.+.||+|+||.||+|++.+|+.||+|+++.... .....+.+|+.++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 334445566777899999999999999997799999999864321 13456889999999999
Q ss_pred CCceeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCE
Q 002155 734 HQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNI 813 (959)
Q Consensus 734 h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 813 (959)
| +++++++.. +..++||||++||+|.+ +.. .....++.|++.|++||| +.||+||||||+||
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NI 224 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNV 224 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHE
Confidence 5 777776543 56799999999999988 421 123479999999999999 89999999999999
Q ss_pred EECCCCcEEEcccccccccccccccccccccccccccCCCcCC
Q 002155 814 LLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQ 856 (959)
Q Consensus 814 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 856 (959)
+++ ++.+||+|||+++. +..|+|||++.
T Consensus 225 Ll~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp EEE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred EEE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 999 99999999999853 33567888754
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=5.5e-21 Score=211.54 Aligned_cols=241 Identities=20% Similarity=0.177 Sum_probs=144.3
Q ss_pred ceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCC-CCCCcCCCCcceE-EEeeC
Q 002155 297 VFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGP-IPSEFGDSIKLQG-LYLGN 374 (959)
Q Consensus 297 ~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~-L~L~~ 374 (959)
+++.++++++ .+|..+ .+++++|+|++|+|+.+.+++|.++++|++|+|++|++.+. .+.+|.+++++++ +.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4566666666 455544 24677788888888777777788888888888888877543 3456777776654 55666
Q ss_pred cccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCC-ccccCCCchhhhccc-ccceEeeccccccCC
Q 002155 375 NQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSF-NELDGQLPSSLSNIL-NLVGLYLQHNKLSGP 452 (959)
Q Consensus 375 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~ 452 (959)
|+++...|..|..+++|++|++++|+++...+..+....++..|++.+ |++....+..|..+. .++.|++++|+|+.+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i 169 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 169 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC
Confidence 777766677777777788888888777766666666666677777754 456544445555553 466677777777665
Q ss_pred ccccccchhhhhhceeccCCcccCCCCCccccCccccceeeecc-ccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccc
Q 002155 453 VDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHE-NKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETM 531 (959)
Q Consensus 453 ~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 531 (959)
++.+|. .++|++|++++ |.++...+..|..+++|++|||++|+|+...+..+
T Consensus 170 ~~~~f~---------------------------~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~ 222 (350)
T 4ay9_X 170 HNSAFN---------------------------GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL 222 (350)
T ss_dssp CTTSST---------------------------TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC
T ss_pred Chhhcc---------------------------ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh
Confidence 555443 34555555553 44442222345556666666666666654333333
Q ss_pred cCCCCccEEecccC-cCcccCCCCcccCCCccccccCCCCCC
Q 002155 532 CSLSNLLYLSLAEN-RLEGMVPRSGICQNLSKISLTGNKDLC 572 (959)
Q Consensus 532 ~~l~~L~~L~l~~N-~l~~~~~~~~~~~~l~~l~l~~N~~~c 572 (959)
.+ |+.|.+.++ .++.+ |....+.+|+.+++. |++.|
T Consensus 223 ~~---L~~L~~l~~~~l~~l-P~l~~l~~L~~l~l~-~~~~c 259 (350)
T 4ay9_X 223 EN---LKKLRARSTYNLKKL-PTLEKLVALMEASLT-YPSHC 259 (350)
T ss_dssp TT---CCEEECTTCTTCCCC-CCTTTCCSCCEEECS-CHHHH
T ss_pred cc---chHhhhccCCCcCcC-CCchhCcChhhCcCC-CCccc
Confidence 33 333333222 23333 334445556655553 44555
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=7.5e-21 Score=221.02 Aligned_cols=188 Identities=26% Similarity=0.309 Sum_probs=116.9
Q ss_pred cccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeec
Q 002155 43 QMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIF 122 (959)
Q Consensus 43 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 122 (959)
+|+.|+|++|++.+ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|+++ |. |.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~i-p~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTL-PE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCC-CC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCc-ch-hhc--CCCEEECC
Confidence 78888888888774 776653 77888888888887 566 3467888888888888863 33 544 77777777
Q ss_pred ccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCC
Q 002155 123 RNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLP 202 (959)
Q Consensus 123 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 202 (959)
+|.+.+ +|. ...+|++|++++|++++ +|. .+++|++|++++|.+++ +|. |. ++|+.|+|++|+|+ .+|
T Consensus 129 ~N~l~~-lp~--~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 129 NNQLTM-LPE--LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CCcCCC-CCC--cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 777765 444 23356777777777765 333 34566666666666663 444 44 56666666666666 344
Q ss_pred ccccCCCCC-------CEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhccc
Q 002155 203 KEIGNLSAL-------SVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLA 257 (959)
Q Consensus 203 ~~~~~l~~L-------~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 257 (959)
. |.. +| +.|+|++|.|+ .+|..+..+++|++|+|++|++++.+|..|..++
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 4 433 44 55666666665 3444455555666666666665555555555443
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=7.6e-20 Score=186.33 Aligned_cols=132 Identities=27% Similarity=0.275 Sum_probs=66.2
Q ss_pred cccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEcc
Q 002155 318 VVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLT 397 (959)
Q Consensus 318 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 397 (959)
+++.|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 45555555555554444445555555555555555554444444555555555555555554444444455555555555
Q ss_pred CCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccc
Q 002155 398 GNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKL 449 (959)
Q Consensus 398 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 449 (959)
+|++++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|++
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 160 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 160 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCe
Confidence 5555544444444455555555555555443333344444444444444443
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=1.1e-19 Score=185.09 Aligned_cols=181 Identities=22% Similarity=0.205 Sum_probs=111.7
Q ss_pred cEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeeccc
Q 002155 45 ESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRN 124 (959)
Q Consensus 45 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 124 (959)
+.++.+++.+. .+|..+ .++|++|+|++|++++..+..|..+++|++|++++|+++++++..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 34566666655 455433 346666666666666555555666666666666666666655555666666666665555
Q ss_pred ccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCcc
Q 002155 125 HIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKE 204 (959)
Q Consensus 125 ~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 204 (959)
.+.+.. +..+..+++|++|++++|++++..+..|..+++|++|+|++|.+++..+..
T Consensus 87 ~l~~~~-----------------------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 143 (208)
T 2o6s_A 87 QLQSLP-----------------------NGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGV 143 (208)
T ss_dssp CCCCCC-----------------------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred cCCccC-----------------------HhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHH
Confidence 554333 333444455555555555555444445666777777777777777655556
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccC
Q 002155 205 IGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQ 258 (959)
Q Consensus 205 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 258 (959)
|..+++|++|++++|.+.+ .+++|++|+++.|++++.+|..++.++.
T Consensus 144 ~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 144 FDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred hccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 7777777777777776553 3456777777777777777777766654
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=9.4e-20 Score=195.72 Aligned_cols=171 Identities=20% Similarity=0.251 Sum_probs=72.1
Q ss_pred cCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEE
Q 002155 63 GNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVL 142 (959)
Q Consensus 63 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L 142 (959)
..+++|++|++++|.++ .++ .+..+++|++|++++|++++..+ +.++++|++|++++|.+.+ +|......+|++|
T Consensus 43 ~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L 117 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSSLKDLKKLKSL 117 (291)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEE
T ss_pred hhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-ChhhccCCCCCEE
Confidence 34455555555555554 222 24445555555555555554333 4455555555555444432 1111111123344
Q ss_pred eccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCC
Q 002155 143 DLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFD 222 (959)
Q Consensus 143 ~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~ 222 (959)
++++|++++. ..+..+++|++|++++|++++. ..+..+++|++|+|++|.|++..+ +..+++|+.|+|++|.|+
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 4444444321 1233334444444444444322 234444444444444444443222 444444444444444444
Q ss_pred ccCCccccCCCCCCEEEcccccCC
Q 002155 223 GIIPYELGDCISLTTLDLGNNNLS 246 (959)
Q Consensus 223 ~~~~~~~~~l~~L~~L~L~~N~l~ 246 (959)
.. + .+..+++|+.|++++|+++
T Consensus 192 ~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 192 DL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp BC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred CC-h-hhccCCCCCEEECcCCccc
Confidence 22 1 2444444444444444443
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.79 E-value=4.4e-19 Score=206.12 Aligned_cols=180 Identities=29% Similarity=0.398 Sum_probs=149.3
Q ss_pred CCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccC
Q 002155 67 MLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDS 146 (959)
Q Consensus 67 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~ 146 (959)
+|+.|+|++|++++ +|..+ .++|++|+|++|+|+.+ | ..+++|++|+|++|.+.+ +|. +.. +|++|++++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~~i-p---~~l~~L~~L~Ls~N~l~~-ip~-l~~-~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALISL-P---ELPASLEYLDACDNRLST-LPE-LPA-SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CCC-CCT-TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCccc-c---cccCCCCEEEccCCCCCC-cch-hhc-CCCEEECCC
Confidence 89999999999995 77766 48999999999999954 4 457999999999999997 666 555 899999999
Q ss_pred CccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCC
Q 002155 147 NNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIP 226 (959)
Q Consensus 147 n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 226 (959)
|++++ +|. .+++|+.|++++|.|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|.|+ .+|
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 99997 454 68899999999999985 665 67899999999999996 666 66 89999999999999 555
Q ss_pred ccccCCCCC-------CEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCC
Q 002155 227 YELGDCISL-------TTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPI 273 (959)
Q Consensus 227 ~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 273 (959)
. +.. +| ++|+|++|+|+. +|..+..+++|+.|+|++|.+++.+
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~ 246 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRI 246 (571)
T ss_dssp C-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHH
T ss_pred h-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcC
Confidence 5 554 67 999999999985 4777777999999999999887533
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.8e-19 Score=211.96 Aligned_cols=188 Identities=23% Similarity=0.284 Sum_probs=90.2
Q ss_pred ccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecc
Q 002155 44 MESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR 123 (959)
Q Consensus 44 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 123 (959)
+..++|+.+.+...++ +..|++|+.|+|++|.+. .+| .+..+++|+.|+|++|++++..+ |..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3444445444442222 445555566666666555 333 35555566666666665554443 55555555555555
Q ss_pred cccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCc
Q 002155 124 NHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPK 203 (959)
Q Consensus 124 n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 203 (959)
|.+.+ +|......+|++|+|++|++.+. ..+..+++|+.|+|++|.|++. .
T Consensus 97 N~l~~-l~~l~~l~~L~~L~Ls~N~l~~l--------------------------~~l~~l~~L~~L~Ls~N~l~~l--~ 147 (605)
T 1m9s_A 97 NKIKD-LSSLKDLKKLKSLSLEHNGISDI--------------------------NGLVHLPQLESLYLGNNKITDI--T 147 (605)
T ss_dssp SCCCC-CTTSTTCTTCCEEECTTSCCCCC--------------------------GGGGGCTTCSEEECCSSCCCCC--G
T ss_pred CCCCC-ChhhccCCCCCEEEecCCCCCCC--------------------------ccccCCCccCEEECCCCccCCc--h
Confidence 55442 11111111233444444443321 1244444555555555555432 3
Q ss_pred cccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 204 EIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 204 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
.+..+++|+.|+|++|.|.+..| +..+++|+.|+|++|+|+++ ..|..+++|+.|+|++|.+.
T Consensus 148 ~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 148 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 45555555555555555554333 45555555555555555543 23555555555555555554
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=4.4e-19 Score=208.71 Aligned_cols=100 Identities=23% Similarity=0.356 Sum_probs=45.6
Q ss_pred ceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcc
Q 002155 162 TLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLG 241 (959)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 241 (959)
.+..+.+.++.+....+ +..+++|+.|++++|.|.. ++ .|..+++|+.|+|++|.|++..| +..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 34444444444443222 3445555555555555542 22 34455555555555555543332 4444555555555
Q ss_pred cccCCCCCchhhhcccCCCeeEcccccC
Q 002155 242 NNNLSGLIPEKIADLAQLQCLVLSHNNL 269 (959)
Q Consensus 242 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 269 (959)
+|+++++ ..+..+++|+.|+|++|.+
T Consensus 96 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l 121 (605)
T 1m9s_A 96 ENKIKDL--SSLKDLKKLKSLSLEHNGI 121 (605)
T ss_dssp SSCCCCC--TTSTTCTTCCEEECTTSCC
T ss_pred CCCCCCC--hhhccCCCCCEEEecCCCC
Confidence 5544432 1344444444444444443
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=4.1e-19 Score=182.20 Aligned_cols=135 Identities=24% Similarity=0.275 Sum_probs=76.8
Q ss_pred CCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceec
Q 002155 390 GLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMN 469 (959)
Q Consensus 390 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ 469 (959)
+|+.|++++|+|+++.+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|+.+++.
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~-------------- 98 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKS-------------- 98 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTT--------------
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHh--------------
Confidence 445555555555544444555555555555555555544455555555555555555555543332
Q ss_pred cCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcc
Q 002155 470 MSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEG 549 (959)
Q Consensus 470 ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 549 (959)
.|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++.+
T Consensus 99 ------------~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 99 ------------LFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp ------------TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ------------HccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 23345566666666666665556666666666666666666666555566666666666666666654
Q ss_pred c
Q 002155 550 M 550 (959)
Q Consensus 550 ~ 550 (959)
.
T Consensus 167 ~ 167 (220)
T 2v9t_B 167 D 167 (220)
T ss_dssp S
T ss_pred C
Confidence 3
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=2e-21 Score=227.42 Aligned_cols=200 Identities=19% Similarity=0.143 Sum_probs=92.0
Q ss_pred CCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCce
Q 002155 39 GNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQ 118 (959)
Q Consensus 39 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 118 (959)
+..++|+.|+|++|++. .+|++++.+++|++|++++|.....+|.. +..+.+.+.+|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhccc
Confidence 34445555555555554 45555555555555555444310000000 0001134455566666666666
Q ss_pred ee-ecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcc
Q 002155 119 LV-IFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNML 197 (959)
Q Consensus 119 L~-L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 197 (959)
|+ ++.|.+. .|..+.+++|.++...+. .|+.|++++|.|++ +|. |+.+++|+.|+|++|.|
T Consensus 414 L~~l~~n~~~----------~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l 475 (567)
T 1dce_A 414 VDPMRAAYLD----------DLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRL 475 (567)
T ss_dssp HCGGGHHHHH----------HHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCC
T ss_pred Ccchhhcccc----------hhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCcccc
Confidence 66 4554432 123333334443322111 24444444444442 333 44555555555555555
Q ss_pred cccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCC-chhhhcccCCCeeEcccccCCC
Q 002155 198 KGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLI-PEKIADLAQLQCLVLSHNNLSG 271 (959)
Q Consensus 198 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~ 271 (959)
+ .+|..|+++++|++|+|++|.|++ +| .++.+++|++|+|++|+|++.. |..|+.+++|+.|+|++|.+++
T Consensus 476 ~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 476 R-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp C-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred c-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 5 444455555555555555555543 33 4455555555555555555443 4455555555555555555543
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=3.7e-19 Score=182.48 Aligned_cols=157 Identities=19% Similarity=0.215 Sum_probs=116.3
Q ss_pred eEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCC-CccCCcccccccccCCccccCCCchhhhcccccceEeecc
Q 002155 368 QGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVP-TSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQH 446 (959)
Q Consensus 368 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 446 (959)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..+ ..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 46777777777 3454443 345677777777775533 3466777777777777777766666677777777777776
Q ss_pred ccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCC
Q 002155 447 NKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQ 526 (959)
Q Consensus 447 N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 526 (959)
|+|++++ +..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++.
T Consensus 91 N~l~~~~--------------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 144 (220)
T 2v70_A 91 NRLENVQ--------------------------HKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTV 144 (220)
T ss_dssp SCCCCCC--------------------------GGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCB
T ss_pred CccCccC--------------------------HhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEE
Confidence 6666543 44566678889999999999887788888899999999999999888
Q ss_pred CCccccCCCCccEEecccCcCcccCCC
Q 002155 527 IPETMCSLSNLLYLSLAENRLEGMVPR 553 (959)
Q Consensus 527 ~p~~~~~l~~L~~L~l~~N~l~~~~~~ 553 (959)
.|..|..+++|+.|++++|++.+..+.
T Consensus 145 ~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 145 APGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred CHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 888888899999999988888876553
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=1.2e-18 Score=193.54 Aligned_cols=177 Identities=23% Similarity=0.207 Sum_probs=109.6
Q ss_pred cEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccc-cCCCCceeeecccccccccCcccCCCcccEEeccCC
Q 002155 69 KSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFE-KCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSN 147 (959)
Q Consensus 69 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n 147 (959)
+.+++++|+++ .+|..+ .+.++.|+|++|+|+++.+..|. ++++|++|+|++|.|.+.
T Consensus 21 ~~l~c~~~~l~-~iP~~~--~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i------------------ 79 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSL--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFI------------------ 79 (361)
T ss_dssp TEEECCSSCCS-SCCSSC--CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEE------------------
T ss_pred CEEEeCCCCcC-ccCccC--CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCcc------------------
Confidence 45555555555 344443 23455555555555555555444 455554444444444332
Q ss_pred ccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCc
Q 002155 148 NFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPY 227 (959)
Q Consensus 148 ~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 227 (959)
.+..|..+++|++|++++|+|+...+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|.|+.+.+.
T Consensus 80 -----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 80 -----SSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp -----CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred -----ChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 233333344444444444444434445566777777777777777766677788888888888888888765555
Q ss_pred cc---cCCCCCCEEEcccccCCCCCchhhhcccC--CCeeEcccccCCC
Q 002155 228 EL---GDCISLTTLDLGNNNLSGLIPEKIADLAQ--LQCLVLSHNNLSG 271 (959)
Q Consensus 228 ~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~Ls~N~l~~ 271 (959)
.| ..+++|++|+|++|+|+.+.+..|..++. |+.|+|++|.+..
T Consensus 155 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp GTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred HhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 55 56788888888888888777778888877 4888888888763
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=8.6e-19 Score=188.19 Aligned_cols=175 Identities=20% Similarity=0.231 Sum_probs=152.0
Q ss_pred cCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCc
Q 002155 38 LGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLS 117 (959)
Q Consensus 38 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 117 (959)
+..+++|+.|++++|++. .++ .+..+++|++|+|++|++++. +. +..+++|++|++++|++++. ..+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKDL--SSLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCG--GGGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCCC--hhhccCCCCC
Confidence 457889999999999998 555 499999999999999999954 44 99999999999999999974 3499999999
Q ss_pred eeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcc
Q 002155 118 QLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNML 197 (959)
Q Consensus 118 ~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 197 (959)
+|++++|.+.+. +......+|++|++++|++++. ..+..+++|++|++++|.+++..+ +..+++|++|+|++|.|
T Consensus 116 ~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 116 SLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 999999999864 4433444699999999999976 678999999999999999996554 99999999999999999
Q ss_pred cccCCccccCCCCCCEEEccCCcCCccC
Q 002155 198 KGHLPKEIGNLSALSVLDLNSNLFDGII 225 (959)
Q Consensus 198 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 225 (959)
++ ++ .+..+++|+.|++++|.++...
T Consensus 191 ~~-l~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 191 SD-LR-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp CB-CG-GGTTCTTCSEEEEEEEEEECCC
T ss_pred CC-Ch-hhccCCCCCEEECcCCcccCCc
Confidence 95 44 5999999999999999998533
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=5.5e-21 Score=223.64 Aligned_cols=203 Identities=24% Similarity=0.225 Sum_probs=145.9
Q ss_pred CCCCCCcEEEccCccccccCCcccccCCCCceeeecccc-------------cccccCcccCCC-cccEEe-ccCCcccc
Q 002155 87 CTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNH-------------IYGSIPEYLSKL-PLMVLD-LDSNNFTG 151 (959)
Q Consensus 87 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-------------~~~~~p~~~~~~-~L~~L~-ls~n~l~~ 151 (959)
...++|+.|+|++|+++ .+|..+++|++|+.|++++|. +.+.+|..++.+ +|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45667777777777776 456667777777777775554 223334444333 244444 3433322
Q ss_pred ccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccC
Q 002155 152 IIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGD 231 (959)
Q Consensus 152 ~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 231 (959)
.|..+.+.+|.++...+ ..|+.|+|++|.|++ +|. |+.+++|+.|+|++|.|+ .+|..++.
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 23444455555553221 259999999999996 666 999999999999999999 78899999
Q ss_pred CCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCC-C
Q 002155 232 CISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPI-P 310 (959)
Q Consensus 232 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~-p 310 (959)
+++|++|+|++|+|+++ | .|+.+++|+.|+|++|+|++ .. |
T Consensus 485 l~~L~~L~Ls~N~l~~l-p-~l~~l~~L~~L~Ls~N~l~~------------------------------------~~~p 526 (567)
T 1dce_A 485 LRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQ------------------------------------SAAI 526 (567)
T ss_dssp CTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCS------------------------------------SSTT
T ss_pred CCCCCEEECCCCCCCCC-c-ccCCCCCCcEEECCCCCCCC------------------------------------CCCc
Confidence 99999999999999974 6 89999999999999998863 22 5
Q ss_pred cccCCcccccEEEccCCcCcccCCc---cccCCCCCCEEEc
Q 002155 311 EELGSCVVVVDLLLNNNMLSGKIPG---SLSRLTNLTTLDL 348 (959)
Q Consensus 311 ~~~~~~~~L~~L~L~~n~i~~~~~~---~~~~l~~L~~L~L 348 (959)
..++.+++|+.|+|++|++++.+|. .+..+++|+.|++
T Consensus 527 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 527 QPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp GGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred HHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 6677777888888888888766553 2445788888864
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=4.4e-19 Score=187.33 Aligned_cols=169 Identities=20% Similarity=0.178 Sum_probs=110.3
Q ss_pred CCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCcee
Q 002155 40 NWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQL 119 (959)
Q Consensus 40 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 119 (959)
++..++.+++++|.+. .++ .+..+++|++|++++|+++ .+| .+..+++|++|+|++|++++..+ |.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4667777888888877 444 5788888888888888887 555 67888888888888888887655 7888888888
Q ss_pred eecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccc
Q 002155 120 VIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKG 199 (959)
Q Consensus 120 ~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 199 (959)
+|++|.+.+.. .... .+|++|++++|++++. ..+..+++|++|++++|++++. + .+..+++|++|+|++|+|++
T Consensus 91 ~L~~N~l~~l~-~~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 91 SVNRNRLKNLN-GIPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp ECCSSCCSCCT-TCCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred ECCCCccCCcC-cccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 88888877533 2222 5577777777777653 2355555555555555555532 2 34555555555555555553
Q ss_pred cCCccccCCCCCCEEEccCCcCC
Q 002155 200 HLPKEIGNLSALSVLDLNSNLFD 222 (959)
Q Consensus 200 ~~~~~~~~l~~L~~L~L~~N~i~ 222 (959)
. ..+..+++|+.|++++|.+.
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEE
T ss_pred h--HHhccCCCCCEEeCCCCccc
Confidence 3 44555555555555555554
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=4.9e-18 Score=174.12 Aligned_cols=134 Identities=22% Similarity=0.202 Sum_probs=110.7
Q ss_pred ccEEeccCCccccccC-cccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEcc
Q 002155 139 LMVLDLDSNNFTGIIP-VSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLN 217 (959)
Q Consensus 139 L~~L~ls~n~l~~~~p-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 217 (959)
+++|++++|++++..| ..|..+++|++|++++|+|++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 4567777777776644 346778888888888888887777788888888888888888887777788888899999999
Q ss_pred CCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCC
Q 002155 218 SNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGP 272 (959)
Q Consensus 218 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 272 (959)
+|.|+++.|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|.+.+.
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 9998888888888888899999999998888888888889999999999888753
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=4.7e-18 Score=188.72 Aligned_cols=157 Identities=25% Similarity=0.172 Sum_probs=135.0
Q ss_pred ccEEeccCCccccccCcccc-cccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEcc
Q 002155 139 LMVLDLDSNNFTGIIPVSIW-NSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLN 217 (959)
Q Consensus 139 L~~L~ls~n~l~~~~p~~~~-~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 217 (959)
+++|+|++|++++..+..+. ++++|+.|++++|+|++..+..|.++++|++|+|++|+|+...+..|.++++|++|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 67788888888888888887 89999999999999998888899999999999999999998888899999999999999
Q ss_pred CCcCCccCCccccCCCCCCEEEcccccCCCCCchhh---hcccCCCeeEcccccCCCCCCCCCcchhhccCCCCcccccc
Q 002155 218 SNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKI---ADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQH 294 (959)
Q Consensus 218 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~ 294 (959)
+|.|+.+.|..|.++++|++|+|++|+|+.+.+..| ..+++|+.|+|++|+|++..+ . .+..+..
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~----~--------~~~~l~~ 188 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPL----T--------DLQKLPA 188 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCH----H--------HHHHSCH
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCH----H--------HhhhccH
Confidence 999999889999999999999999999998766666 679999999999999974221 1 1223333
Q ss_pred --ccceecCCCcCCC
Q 002155 295 --HGVFDLSYNRLSG 307 (959)
Q Consensus 295 --L~~l~L~~n~l~~ 307 (959)
++.|++++|.+..
T Consensus 189 ~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 189 WVKNGLYLHNNPLEC 203 (361)
T ss_dssp HHHTTEECCSSCEEC
T ss_pred hhcceEEecCCCccC
Confidence 4679999999974
No 366
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=5.6e-18 Score=173.67 Aligned_cols=153 Identities=25% Similarity=0.304 Sum_probs=129.6
Q ss_pred cceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCc
Q 002155 296 GVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNN 375 (959)
Q Consensus 296 ~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 375 (959)
..++++++.++ .+|..+. +.++.|++++|+|+++.+..|..+++|++|+|++|++++..|..|.++++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45677777776 4555544 57888999999998888888899999999999999998888888999999999999999
Q ss_pred ccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccccC
Q 002155 376 QLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSG 451 (959)
Q Consensus 376 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 451 (959)
+|+...+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|++++|++..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9987666778889999999999999998888889999999999999999987777788889999999999998864
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=6.2e-18 Score=174.60 Aligned_cols=152 Identities=24% Similarity=0.233 Sum_probs=69.7
Q ss_pred ceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeecc
Q 002155 367 LQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQH 446 (959)
Q Consensus 367 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 446 (959)
-+.++.+++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 344555555554 3333222 4445555555555444444444444444444444444433333344444444444444
Q ss_pred ccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCC
Q 002155 447 NKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQ 526 (959)
Q Consensus 447 N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 526 (959)
|+|++++ +..|..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|++.
T Consensus 98 N~l~~l~--------------------------~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~ 150 (229)
T 3e6j_A 98 NQLTVLP--------------------------SAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSI 150 (229)
T ss_dssp SCCCCCC--------------------------TTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCC
T ss_pred CcCCccC--------------------------hhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCcc
Confidence 4443222 222334445555555555555 4455555555555555555555544
Q ss_pred CCccccCCCCccEEecccCcCc
Q 002155 527 IPETMCSLSNLLYLSLAENRLE 548 (959)
Q Consensus 527 ~p~~~~~l~~L~~L~l~~N~l~ 548 (959)
.+..|..+++|+.|++++|++.
T Consensus 151 ~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 151 PHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CTTTTTTCTTCCEEECTTSCBC
T ss_pred CHHHHhCCCCCCEEEeeCCCcc
Confidence 4444444444444444444333
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=3e-18 Score=180.93 Aligned_cols=169 Identities=21% Similarity=0.225 Sum_probs=93.1
Q ss_pred CCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCee
Q 002155 183 NAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCL 262 (959)
Q Consensus 183 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 262 (959)
++.++..+++++|.+++.. .+..+++|++|++++|.|+. ++ .+..+++|++|+|++|++++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4555666666666666332 46666677777777776663 33 56666777777777777765533 6677777777
Q ss_pred EcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCC
Q 002155 263 VLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTN 342 (959)
Q Consensus 263 ~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~ 342 (959)
+|++|++++. | .+.. .+|+.|++++|++++. +.+..+++|+.|++++|++++. + .+..+++
T Consensus 91 ~L~~N~l~~l-~-------------~~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~ 151 (263)
T 1xeu_A 91 SVNRNRLKNL-N-------------GIPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSK 151 (263)
T ss_dssp ECCSSCCSCC-T-------------TCCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTT
T ss_pred ECCCCccCCc-C-------------cccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCC
Confidence 7777766521 1 1111 3344444444444421 2344555555555555555543 1 4555555
Q ss_pred CCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccC
Q 002155 343 LTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLT 378 (959)
Q Consensus 343 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 378 (959)
|++|++++|++++. ..+..+++|+.|++++|.++
T Consensus 152 L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 152 LEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred CCEEECCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 55555555555543 34445555555555555554
No 369
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=2.6e-17 Score=169.94 Aligned_cols=154 Identities=29% Similarity=0.347 Sum_probs=103.6
Q ss_pred CEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCc
Q 002155 344 TTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFN 423 (959)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 423 (959)
+.++.+++.++. +|..+. ++|+.|+|++|.+++..|..|..+++|++|+|++|+|+.+.+..|.++++|++|+|++|
T Consensus 22 ~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 445555555553 333222 55666666666666665666666667777777777776555566677777777777777
Q ss_pred cccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccC
Q 002155 424 ELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEI 503 (959)
Q Consensus 424 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 503 (959)
+|++..+..|..+++|+.|+|++|+|+. +|..+..+++|+.|+|++|++++..
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~---------------------------lp~~~~~l~~L~~L~L~~N~l~~~~ 151 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLTE---------------------------LPRGIERLTHLTHLALDQNQLKSIP 151 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCS---------------------------CCTTGGGCTTCSEEECCSSCCCCCC
T ss_pred cCCccChhHhCcchhhCeEeccCCcccc---------------------------cCcccccCCCCCEEECCCCcCCccC
Confidence 7776555666777777777777777663 3344556777888888888888665
Q ss_pred CcCCcCCCCCcEEeCCCCcCCCCC
Q 002155 504 PPDLGNLMQLEYLDVSRNRLCGQI 527 (959)
Q Consensus 504 p~~~~~l~~L~~L~Ls~N~l~~~~ 527 (959)
+..+..+++|++|+|++|++.+..
T Consensus 152 ~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 152 HGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTTTTCTTCCEEECTTSCBCTTB
T ss_pred HHHHhCCCCCCEEEeeCCCccCCc
Confidence 667888888888888888887543
No 370
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=7e-18 Score=177.54 Aligned_cols=139 Identities=20% Similarity=0.196 Sum_probs=106.4
Q ss_pred cCCCCCCeeccCCCeEEEEEEc-CCCCE--EEEEEccccchh------------------------hHHHHHHHHHHHhc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAAL-PDGKT--VAVKKLSQAKTQ------------------------GHREFTAEMETLGK 731 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~ 731 (959)
.-|++.+.||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|+..++.
T Consensus 47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 126 (258)
T 1zth_A 47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER 126 (258)
T ss_dssp SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence 3466788999999999999998 67888 999986532111 11357889999999
Q ss_pred CCCCce--eccccceecCCceEEEEEeccC-C----CHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 002155 732 VKHQNL--VPLLGYCSFDEEKLLVYEYMVN-G----SLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHII 804 (959)
Q Consensus 732 l~h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 804 (959)
++|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.|||. +.||+
T Consensus 127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~--~~giv 193 (258)
T 1zth_A 127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQ--EAELV 193 (258)
T ss_dssp HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHH--TSCEE
T ss_pred HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHH--HCCEE
Confidence 988864 233321 467899999953 4 66665432 1234567899999999999994 46999
Q ss_pred eCCCCCCCEEECCCCcEEEccccccccc
Q 002155 805 HRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 805 H~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
||||||+|||++. .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999998 9999999999754
No 371
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=3.1e-18 Score=187.77 Aligned_cols=221 Identities=14% Similarity=0.122 Sum_probs=119.6
Q ss_pred CcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEccccc----CCCCCchhhhcccCC
Q 002155 184 AAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNN----LSGLIPEKIADLAQL 259 (959)
Q Consensus 184 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~----l~~~~~~~~~~l~~L 259 (959)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.+..+.+.+|.++.++..+.+..+. ...+....|.++.+|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66666666666 5655555666666666666666666666666666666666655554421 122222334444444
Q ss_pred C-eeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccc-
Q 002155 260 Q-CLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSL- 337 (959)
Q Consensus 260 ~-~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~- 337 (959)
+ .+.+....- .+...+. .-....++..+.+.++-.. .....+
T Consensus 179 ~~~i~~~~~~~------l~~~~~~-----------------------------~~~~~~~~~~l~~~~~l~~-~~~~~l~ 222 (329)
T 3sb4_A 179 ETTIQVGAMGK------LEDEIMK-----------------------------AGLQPRDINFLTIEGKLDN-ADFKLIR 222 (329)
T ss_dssp EEEEEECTTCC------HHHHHHH-----------------------------TTCCGGGCSEEEEEECCCH-HHHHHHH
T ss_pred ceeEEecCCCc------HHHHHhh-----------------------------cccCccccceEEEeeeecH-HHHHHHH
Confidence 4 222221100 0000000 0001122233333322111 111111
Q ss_pred cCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCc-EEEccCCcCCCCCCCccCCccccc
Q 002155 338 SRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLV-KLNLTGNKLSGKVPTSFGNLKELT 416 (959)
Q Consensus 338 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-~L~L~~N~i~~~~~~~~~~l~~L~ 416 (959)
..+++|+.|+|++|+++.+.+.+|.++.+|+.|++.+| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+
T Consensus 223 ~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~ 300 (329)
T 3sb4_A 223 DYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLR 300 (329)
T ss_dssp HHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEE
T ss_pred HhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCC
Confidence 22566777777776666666666777777777777666 5555566677777776 777766 55556666777777777
Q ss_pred ccccCCccccCCCchhhhcccccceEe
Q 002155 417 HLDLSFNELDGQLPSSLSNILNLVGLY 443 (959)
Q Consensus 417 ~L~L~~N~l~~~~~~~l~~l~~L~~L~ 443 (959)
.++++.|.++...+.+|.++++|+.++
T Consensus 301 ~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 301 YVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEeCCCccCccchhhhcCCcchhhhc
Confidence 777777777666666777777777665
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=2.5e-17 Score=165.96 Aligned_cols=109 Identities=23% Similarity=0.196 Sum_probs=84.9
Q ss_pred ccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCC
Q 002155 156 SIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISL 235 (959)
Q Consensus 156 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 235 (959)
....+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|.+++..+..++.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3456677777777777777 555 67788888888888887662 3477888888888888888887677778888888
Q ss_pred CEEEcccccCCCCCchhhhcccCCCeeEccccc
Q 002155 236 TTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNN 268 (959)
Q Consensus 236 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 268 (959)
++|+|++|++++..+..|+.+++|++|++++|+
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 888888888887677788888888888888876
No 373
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=2.1e-18 Score=189.09 Aligned_cols=218 Identities=12% Similarity=0.090 Sum_probs=132.2
Q ss_pred cccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcc----cCCccccccccCCCC
Q 002155 316 CVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQ----LTGSIPWSLGSLGGL 391 (959)
Q Consensus 316 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~----l~~~~~~~~~~l~~L 391 (959)
+++|+.+.+.+ .++.+.+.+|.++++|+.|++++|.+..+.+.+|.++.++..+.++.+. .......+|..+..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66666677766 6666667777777777777777777776777777776666666655532 222334455566666
Q ss_pred c-EEEccCCcCCCCCCCc----cCCcccccccccCCccccCCCchhh-hcccccceEeeccccccCCccccccchhhhhh
Q 002155 392 V-KLNLTGNKLSGKVPTS----FGNLKELTHLDLSFNELDGQLPSSL-SNILNLVGLYLQHNKLSGPVDELFSNSAAWKI 465 (959)
Q Consensus 392 ~-~L~L~~N~i~~~~~~~----~~~l~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l 465 (959)
+ .+.+.... .++.. -....++..+.+.++-.. .....+ ..+++|+.|+|++|+++.+++.+|.... +|
T Consensus 179 ~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~--~L 252 (329)
T 3sb4_A 179 ETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKK--YL 252 (329)
T ss_dssp EEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCT--TC
T ss_pred ceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCC--CC
Confidence 5 44443221 11110 012334444544443221 111112 2367777777777777777776666554 56
Q ss_pred ceeccCCcccCCCCCccccCccccc-eeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEec
Q 002155 466 ATMNMSNNLFDGGLPRSLGNLSYLT-NLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSL 542 (959)
Q Consensus 466 ~~L~ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 542 (959)
+.+++++| ++.+.+.+|.++++|+ .|++.+ +++...+.+|.++++|+.|++++|+++.+.+..|.++++|+.++.
T Consensus 253 ~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 253 LKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 66666665 5555666777777777 777777 666556677777777777777777777666677777777777653
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=5.4e-17 Score=163.44 Aligned_cols=154 Identities=16% Similarity=0.210 Sum_probs=81.1
Q ss_pred ccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccE
Q 002155 62 IGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMV 141 (959)
Q Consensus 62 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~ 141 (959)
...+++|++|++++|.++ .+| .+..+++|++|++++|.++.. ..+..+++|++|++++|.+.
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~-------------- 101 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVT-------------- 101 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCB--------------
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccC--------------
Confidence 356667777777777776 455 466677777777777755422 24444555555444444433
Q ss_pred EeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCc-
Q 002155 142 LDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNL- 220 (959)
Q Consensus 142 L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~- 220 (959)
+..+..|+.+++|++|+|++|.+++..+..+..+++|++|++++|.
T Consensus 102 ---------------------------------~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~ 148 (197)
T 4ezg_A 102 ---------------------------------SDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA 148 (197)
T ss_dssp ---------------------------------GGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTB
T ss_pred ---------------------------------cccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCC
Confidence 2233334444455555555555554444555555555555555554
Q ss_pred CCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCC
Q 002155 221 FDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 221 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
++ .+| .+..+++|++|++++|++++. + .+..+++|+.|++++|++.
T Consensus 149 i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 149 IT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC---
T ss_pred cc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcccC
Confidence 43 222 355555555555555555543 2 4555555555555555543
No 375
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.69 E-value=8.7e-18 Score=202.96 Aligned_cols=191 Identities=21% Similarity=0.226 Sum_probs=104.0
Q ss_pred cCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCC
Q 002155 332 KIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGN 411 (959)
Q Consensus 332 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 411 (959)
..+..|..+++|+.|+|++|.+. .+|..+..+++|+.|+|++|.|+ .+|..|..+++|++|+|++|+|+ .+|..|++
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 45666777777888888888877 45555557778888888888887 67777888888888888888888 56888888
Q ss_pred cccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccce
Q 002155 412 LKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTN 491 (959)
Q Consensus 412 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~ 491 (959)
+++|++|+|++|.|+ .+|..|..+++|+.|+|++|+|++.++..+..... ....+++++|.+++.+|.. |+.
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~-~~~~l~l~~N~l~~~~p~~------l~~ 363 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSV-TGLIFYLRDNRPEIPLPHE------RRF 363 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHH-HHHHHHHHHCCCCCCCCCC---------
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcch-hhhHHhhccCcccCcCccc------cce
Confidence 888888888888887 66777888888888888888888777766654321 1223455555555544432 333
Q ss_pred eeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcc
Q 002155 492 LDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEG 549 (959)
Q Consensus 492 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 549 (959)
|++++|... -..+ +.|.+..+..+..+..+....+++|-+..
T Consensus 364 l~l~~n~~~---~~~~-------------~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 364 IEINTDGEP---QREY-------------DSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ------------------------------------------------------CCCG
T ss_pred eEeeccccc---cccc-------------CCccccccchhhcccccceeeeecccccc
Confidence 444444100 0111 13333344445556666677777776653
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=2.6e-17 Score=164.80 Aligned_cols=132 Identities=27% Similarity=0.308 Sum_probs=86.8
Q ss_pred cEEEccCCcCCCCCCCccCCcccccccccCCccccCCCch-hhhcccccceEeeccccccCCccccccchhhhhhceecc
Q 002155 392 VKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPS-SLSNILNLVGLYLQHNKLSGPVDELFSNSAAWKIATMNM 470 (959)
Q Consensus 392 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~l 470 (959)
+++++++|.++ .+|..+.. +|++|++++|+|++..+. .|..+++|+.|+|++|+|+++.+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---------------- 71 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEP---------------- 71 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCT----------------
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCH----------------
Confidence 67888888886 45554433 778888888888755553 47777777777777777776544
Q ss_pred CCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCccc
Q 002155 471 SNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGM 550 (959)
Q Consensus 471 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 550 (959)
..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|++.+.
T Consensus 72 ----------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 72 ----------NAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp ----------TTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred ----------hHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 4455556666666666666655555566666666666666666666666666666666666666666655
Q ss_pred CC
Q 002155 551 VP 552 (959)
Q Consensus 551 ~~ 552 (959)
.+
T Consensus 142 c~ 143 (192)
T 1w8a_A 142 CH 143 (192)
T ss_dssp GG
T ss_pred Cc
Confidence 44
No 377
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=3.1e-17 Score=198.09 Aligned_cols=150 Identities=23% Similarity=0.292 Sum_probs=92.2
Q ss_pred cCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEcccccccccc
Q 002155 98 DGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSL 177 (959)
Q Consensus 98 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~ 177 (959)
+.|.+. .+++.|..+++|+.|+|++|.+.. +|..+..+++|++|+|++|.|+ .+
T Consensus 209 ~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~------------------------l~~~~~~l~~L~~L~Ls~N~l~-~l 262 (727)
T 4b8c_D 209 IENRMV-MPKDSKYDDQLWHALDLSNLQIFN------------------------ISANIFKYDFLTRLYLNGNSLT-EL 262 (727)
T ss_dssp --------------CCCCCCEEECTTSCCSC------------------------CCGGGGGCCSCSCCBCTTSCCS-CC
T ss_pred ccccee-cChhhhccCCCCcEEECCCCCCCC------------------------CChhhcCCCCCCEEEeeCCcCc-cc
Confidence 344444 456666666666666666665542 2222223444444444444444 55
Q ss_pred CccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhccc
Q 002155 178 PYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLA 257 (959)
Q Consensus 178 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 257 (959)
|..|+++++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|+|++.+|..+..+.
T Consensus 263 p~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 340 (727)
T 4b8c_D 263 PAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKS 340 (727)
T ss_dssp CGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHH
T ss_pred ChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcc
Confidence 666777777888888888887 66777888888888888888887 5666788888888888888888877777776543
Q ss_pred C-CCeeEcccccCCCCCCC
Q 002155 258 Q-LQCLVLSHNNLSGPIPS 275 (959)
Q Consensus 258 ~-L~~L~Ls~N~l~~~~~~ 275 (959)
. +..|+|++|.+++.+|.
T Consensus 341 ~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 341 VTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp HHHHHHHHHHCCCCCCCCC
T ss_pred hhhhHHhhccCcccCcCcc
Confidence 2 23467778877765553
No 378
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.66 E-value=2.6e-15 Score=167.74 Aligned_cols=249 Identities=12% Similarity=0.144 Sum_probs=140.3
Q ss_pred CcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCC
Q 002155 131 PEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSA 210 (959)
Q Consensus 131 p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 210 (959)
...|...+|+.+.+..+ ++.+...+|.++ +|+.+.+.+ .++...+.+|.++++|+.++|++|+++.....+|. .++
T Consensus 129 ~~aF~~~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~ 204 (401)
T 4fdw_A 129 KDAFRNSQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAG 204 (401)
T ss_dssp TTTTTTCCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCC
T ss_pred HhhcccCCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecc
Confidence 33333334444444433 444444444442 355555543 33334445555555555555555555544444444 355
Q ss_pred CCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCcc
Q 002155 211 LSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLS 290 (959)
Q Consensus 211 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~ 290 (959)
|+.+.|..+ ++.+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+..+ ++
T Consensus 205 L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~~-i~-------------------- 260 (401)
T 4fdw_A 205 IEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPNG-VT-------------------- 260 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEETT-CC--------------------
T ss_pred cCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCCC-cc--------------------
Confidence 555555533 44455555555555555555543 34444455555 45555555221 11
Q ss_pred ccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCc-----ccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCC
Q 002155 291 FIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLS-----GKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSI 365 (959)
Q Consensus 291 ~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~-----~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 365 (959)
.....+|.++++|+.+.+.+|.+. .+.+.+|.++++|+.+++. +.++.+...+|.++.
T Consensus 261 ----------------~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~ 323 (401)
T 4fdw_A 261 ----------------NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNR 323 (401)
T ss_dssp ----------------EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCC
T ss_pred ----------------EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCC
Confidence 012233444444444444444433 4566677777777777777 346666677777778
Q ss_pred cceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcc-cccccccCCcccc
Q 002155 366 KLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLK-ELTHLDLSFNELD 426 (959)
Q Consensus 366 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~L~~N~l~ 426 (959)
+|+.+.+..| ++.+...+|.++ +|+.+++.+|.+....+..|.+++ +++.|.+..+.+.
T Consensus 324 ~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 324 KVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 8888888554 555666777777 888888888877766677777774 5777777766654
No 379
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=1.6e-16 Score=159.05 Aligned_cols=180 Identities=21% Similarity=0.255 Sum_probs=139.5
Q ss_pred eEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCC-ccCCcccccccccCCccccCCCchhhhcccccceEeecc
Q 002155 368 QGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPT-SFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQH 446 (959)
Q Consensus 368 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 446 (959)
+.+++++|.++ .+|..+.. +|++|++++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78999999997 66765543 899999999999977665 589999999999999999988899999999999999999
Q ss_pred ccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCC
Q 002155 447 NKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQ 526 (959)
Q Consensus 447 N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 526 (959)
|+|++++ |..|.++++|++|+|++|++++..|..+..+++|++|+|++|++++.
T Consensus 88 N~l~~~~--------------------------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEIS--------------------------NKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEEC--------------------------SSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccC--------------------------HHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 9988644 34566788999999999999998899999999999999999999876
Q ss_pred CCc-cccCCCCccEEecccCcCcccCCCCcccCCCccccccCCCCCCCCCCCCCc
Q 002155 527 IPE-TMCSLSNLLYLSLAENRLEGMVPRSGICQNLSKISLTGNKDLCGKIIGSNC 580 (959)
Q Consensus 527 ~p~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~~~~~~c 580 (959)
.+- .+. ..++...+.++...+..|. .+.+....++..+...|.......|
T Consensus 142 c~l~~~~--~~l~~~~~~~~~~~C~~P~--~l~~~~l~~l~~~~~~C~~~~~~~c 192 (192)
T 1w8a_A 142 CHLAWFA--EWLRKKSLNGGAARCGAPS--KVRDVQIKDLPHSEFKCSSENSEGC 192 (192)
T ss_dssp GGGHHHH--HHHHHHCCSGGGCBBCSST--TTTTSBGGGSCTTTCCCCCC---CC
T ss_pred CcchHHH--HHHHHcCCCCCCCCCCCCh--HHcCCChhhCcHhhcCcCCCCCCCC
Confidence 542 111 1123334455555554443 2455666677888888876554444
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=3.8e-16 Score=156.25 Aligned_cols=128 Identities=24% Similarity=0.268 Sum_probs=103.8
Q ss_pred eEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCC
Q 002155 441 GLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSR 520 (959)
Q Consensus 441 ~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 520 (959)
.+++++|.++.+|..++. .++.|++++|.++ .+|..|.++++|+.|+|++|++++..+..|.++++|++|+|++
T Consensus 14 ~l~~~~~~l~~ip~~~~~-----~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 14 VVRCSNKGLKVLPKGIPR-----DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EEECTTSCCSSCCSCCCT-----TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCCCcCCCCCCC-----CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 455555555555544332 4556666666665 5667888899999999999999987788899999999999999
Q ss_pred CcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCccccccCCCCCCCC
Q 002155 521 NRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 521 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~~ 574 (959)
|+|++..|..|..+++|++|+|++|+|+++++.. ..+.+|+.+++.+|||.|+|
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 9999888889999999999999999999988764 45788999999999999964
No 381
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.65 E-value=2.3e-15 Score=168.31 Aligned_cols=255 Identities=11% Similarity=0.075 Sum_probs=163.7
Q ss_pred ccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCc
Q 002155 148 NFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPY 227 (959)
Q Consensus 148 ~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 227 (959)
.++.+...+|.+. +|+.+.+.++ ++.....+|.+. +|+.+.+.+ .++.+...+|.++++|+.+++++|.++.+...
T Consensus 123 ~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~ 198 (401)
T 4fdw_A 123 SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAS 198 (401)
T ss_dssp TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTT
T ss_pred ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechh
Confidence 3444555555553 5666666555 444555566553 566666664 44445555666666666666666666655555
Q ss_pred cccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCC
Q 002155 228 ELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSG 307 (959)
Q Consensus 228 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~ 307 (959)
+|. +.+|+.+.|..+ ++.+...+|.++++|+.+++..| ++.
T Consensus 199 aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-------------------------------------l~~ 239 (401)
T 4fdw_A 199 TFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-------------------------------------VST 239 (401)
T ss_dssp TTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-------------------------------------CCE
T ss_pred hEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-------------------------------------ccC
Confidence 555 356666666533 55555566666666666665543 111
Q ss_pred CCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCC-----CCCCCCcCCCCcceEEEeeCcccCCccc
Q 002155 308 PIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLT-----GPIPSEFGDSIKLQGLYLGNNQLTGSIP 382 (959)
Q Consensus 308 ~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~-----~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 382 (959)
....+|.+ .+|+.+.+ .+.++.+...+|.++++|+.+++.+|.+. .+.+.+|.++.+|+.+.+.+ .++.+..
T Consensus 240 I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~ 316 (401)
T 4fdw_A 240 IGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQ 316 (401)
T ss_dssp ECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECT
T ss_pred cccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhh
Confidence 22334444 56777777 45566677788888888888888877665 35667778888888888874 4665666
Q ss_pred cccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhccc-ccceEeecccccc
Q 002155 383 WSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNIL-NLVGLYLQHNKLS 450 (959)
Q Consensus 383 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~ 450 (959)
.+|.++++|+.+.|..| ++.+...+|.++ +|+.+++++|.+....+..|.+++ +++.|++..+.+.
T Consensus 317 ~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 317 GLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 77777888888888554 555667778777 788888888777766666677764 6777777776654
No 382
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.62 E-value=1e-14 Score=163.86 Aligned_cols=156 Identities=13% Similarity=0.080 Sum_probs=88.2
Q ss_pred CCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCC
Q 002155 58 IPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKL 137 (959)
Q Consensus 58 ~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~ 137 (959)
-..+|.++++|+.+.|..+ ++.+-..+|.++++|+.+++..+ ++.+...+|.++++|+.+.+..+ +.......|...
T Consensus 63 g~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~ 139 (394)
T 4fs7_A 63 GYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGC 139 (394)
T ss_dssp CTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTC
T ss_pred HHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecc
Confidence 3457888899999999754 66556678888899999999765 66677888999999888776544 333334444444
Q ss_pred cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEcc
Q 002155 138 PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLN 217 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 217 (959)
.+....+. +....+...+|.++++|+.+.+.++... .....|.++.+|+.+.+..| ++.....+|.+...|+.+.+.
T Consensus 140 ~~~~~~~~-~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~ 216 (394)
T 4fs7_A 140 DFKEITIP-EGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFP 216 (394)
T ss_dssp CCSEEECC-TTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCC
T ss_pred cccccccC-ccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecC
Confidence 43332222 1222233344555555555555443222 33444445555555554443 222333444444444444444
Q ss_pred CC
Q 002155 218 SN 219 (959)
Q Consensus 218 ~N 219 (959)
.+
T Consensus 217 ~~ 218 (394)
T 4fs7_A 217 NS 218 (394)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 383
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=4.7e-16 Score=168.99 Aligned_cols=140 Identities=14% Similarity=0.094 Sum_probs=98.8
Q ss_pred cCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccch--------------hhHHH--------HHHHHHHHhcCCCCc
Q 002155 679 NNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKT--------------QGHRE--------FTAEMETLGKVKHQN 736 (959)
Q Consensus 679 ~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~e~~~l~~l~h~n 736 (959)
.-|.+.+.||+|+||.||+|...+|+.||||+++.... ..... ..+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34888999999999999999999999999998653210 00111 123555555554333
Q ss_pred eeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEEC
Q 002155 737 LVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLN 816 (959)
Q Consensus 737 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 816 (959)
+.-. ..+. ....++||||++|+++..+... .....++.|++.++.||| ..|||||||||.|||++
T Consensus 175 v~vp-~p~~-~~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 175 FPVP-EPIA-QSRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIR 239 (397)
T ss_dssp CSCC-CEEE-EETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred CCCC-eeee-ccCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEe
Confidence 2211 1111 1234799999999888654321 133568899999999999 78999999999999998
Q ss_pred CCC----------cEEEcccccccccc
Q 002155 817 EEF----------EAKVADFGLARLIS 833 (959)
Q Consensus 817 ~~~----------~~kl~Dfg~~~~~~ 833 (959)
+++ .+.|+||+-+....
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCCcccccccccceEEEEeCCcccCC
Confidence 776 48999999886543
No 384
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=2.3e-15 Score=147.24 Aligned_cols=131 Identities=24% Similarity=0.154 Sum_probs=107.8
Q ss_pred cccEEeccCCccc-cccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEc
Q 002155 138 PLMVLDLDSNNFT-GIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDL 216 (959)
Q Consensus 138 ~L~~L~ls~n~l~-~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 216 (959)
.+++|++++|+++ +.+|..+..+++|+.|++++|.+++. ..|..+++|++|+|++|.+++.+|..+.++++|++|+|
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 4777788888877 56677778888888888888888754 67888899999999999998767888888999999999
Q ss_pred cCCcCCccCC-ccccCCCCCCEEEcccccCCCCCc---hhhhcccCCCeeEcccccCC
Q 002155 217 NSNLFDGIIP-YELGDCISLTTLDLGNNNLSGLIP---EKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 217 ~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~ 270 (959)
++|.|++..+ ..+..+++|++|++++|++++..+ ..|..+++|++|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 9999986432 678889999999999999987755 58888999999999988875
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=2.2e-15 Score=147.44 Aligned_cols=136 Identities=29% Similarity=0.288 Sum_probs=111.4
Q ss_pred ccccEEEccCCcCc-ccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEE
Q 002155 317 VVVVDLLLNNNMLS-GKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLN 395 (959)
Q Consensus 317 ~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 395 (959)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|+.|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56778888888887 56677788888899999999988865 7788888999999999998876787777889999999
Q ss_pred ccCCcCCCCCC-CccCCcccccccccCCccccCCCc---hhhhcccccceEeeccccccCCcc
Q 002155 396 LTGNKLSGKVP-TSFGNLKELTHLDLSFNELDGQLP---SSLSNILNLVGLYLQHNKLSGPVD 454 (959)
Q Consensus 396 L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~l~~l~~L~~L~L~~N~l~~~~~ 454 (959)
+++|++++... ..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+..++.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 99999886432 678888999999999999986555 478888999999999988876554
No 386
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.60 E-value=1.3e-14 Score=163.08 Aligned_cols=249 Identities=12% Similarity=0.041 Sum_probs=127.5
Q ss_pred ccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCc
Q 002155 148 NFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPY 227 (959)
Q Consensus 148 ~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 227 (959)
+++.+...+|.++.+|+++.+.++ ++.....+|.++++|+.++|.++ ++.....+|.++++|+.+.+..+ +..+...
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 355566667777777777777644 55455667777777777777654 44455566777777776666544 3335555
Q ss_pred cccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCC
Q 002155 228 ELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSG 307 (959)
Q Consensus 228 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~ 307 (959)
+|.++..+....... +..+...+|.++++|+.+.+..+...
T Consensus 135 aF~~~~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~~~------------------------------------- 175 (394)
T 4fs7_A 135 AFKGCDFKEITIPEG--VTVIGDEAFATCESLEYVSLPDSMET------------------------------------- 175 (394)
T ss_dssp TTTTCCCSEEECCTT--CCEECTTTTTTCTTCCEEECCTTCCE-------------------------------------
T ss_pred eeecccccccccCcc--ccccchhhhcccCCCcEEecCCccce-------------------------------------
Confidence 666654333332222 22233456666666666666543211
Q ss_pred CCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCcccccccc
Q 002155 308 PIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGS 387 (959)
Q Consensus 308 ~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 387 (959)
.....|.++.+|+.+.+..+ ++.+...+|.+++.|+.+.+..+... +...+....+|+.+.+..+. +.+....|..
T Consensus 176 I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~ 251 (394)
T 4fs7_A 176 LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYG 251 (394)
T ss_dssp ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTT
T ss_pred eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCCc-eecccccccc
Confidence 12233444444444444433 33344445555555555555444322 11222233455555554332 2233444555
Q ss_pred CCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeecc
Q 002155 388 LGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQH 446 (959)
Q Consensus 388 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 446 (959)
+..|+.+.+..+... +....|.....++.+....+.+. ...|..+.+|+.+.+.+
T Consensus 252 ~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~ 306 (394)
T 4fs7_A 252 CTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLD 306 (394)
T ss_dssp CSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECT
T ss_pred cccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccccccccccc
Confidence 555555555554433 44455555555555555444322 23455555555555543
No 387
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.60 E-value=4.3e-15 Score=148.54 Aligned_cols=128 Identities=24% Similarity=0.289 Sum_probs=106.1
Q ss_pred cEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCC
Q 002155 140 MVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSN 219 (959)
Q Consensus 140 ~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N 219 (959)
+++++++|+++. +|..+ .++|++|++++|.++ .+|..|.++++|++|+|++|.|++..+.+|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~-ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCc-CCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 456777777763 44433 257888888888887 67788888999999999999999877788999999999999999
Q ss_pred cCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCC
Q 002155 220 LFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSG 271 (959)
Q Consensus 220 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 271 (959)
.|+++.|..|..+++|++|+|++|+|+.+.+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9998888889999999999999999998877788899999999999998864
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=2.5e-15 Score=143.68 Aligned_cols=127 Identities=24% Similarity=0.171 Sum_probs=95.5
Q ss_pred cccEEeccCCccc-cccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEc
Q 002155 138 PLMVLDLDSNNFT-GIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDL 216 (959)
Q Consensus 138 ~L~~L~ls~n~l~-~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 216 (959)
++++|++++|+++ +.+|..+..+++|+.|++++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 3666777777776 56666667777777777777777744 66778888888888888888667777777888888888
Q ss_pred cCCcCCcc-CCccccCCCCCCEEEcccccCCCCCc---hhhhcccCCCeeEccc
Q 002155 217 NSNLFDGI-IPYELGDCISLTTLDLGNNNLSGLIP---EKIADLAQLQCLVLSH 266 (959)
Q Consensus 217 ~~N~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~ 266 (959)
++|.+++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 88888753 34677888888888888888887655 5788888888887763
No 389
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=7.5e-15 Score=144.92 Aligned_cols=129 Identities=20% Similarity=0.194 Sum_probs=94.0
Q ss_pred ceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCC
Q 002155 440 VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVS 519 (959)
Q Consensus 440 ~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 519 (959)
+.+++++|+++.++...+. .++.|++++|.+++..+..|..+++|++|+|++|++++..+..+..+++|++|+++
T Consensus 10 ~~l~~~~~~l~~~p~~~~~-----~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIPS-----SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TEEECCSSCCSSCCTTCCT-----TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEEEecCCCCccCCCCCCC-----CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 4455555555555443332 45556666666665555667778888888888888886666667888888888888
Q ss_pred CCcCCCCCCccccCCCCccEEecccCcCcccCCCC-cccCCCccccccCCCCCCC
Q 002155 520 RNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCG 573 (959)
Q Consensus 520 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~ 573 (959)
+|+|++..+..+..+++|++|++++|+++++++.. ..+.+|+.+++.+|++.|+
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 88888777777888888888888888888877765 4577888888888888874
No 390
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.56 E-value=7.5e-15 Score=140.35 Aligned_cols=130 Identities=24% Similarity=0.201 Sum_probs=84.0
Q ss_pred CcCCceEeccCCccc-ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCee
Q 002155 184 AAALERLVLTNNMLK-GHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCL 262 (959)
Q Consensus 184 l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 262 (959)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356677777777776 55666667777777777777777654 566777777777777777776566666677777777
Q ss_pred EcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCC---ccccC
Q 002155 263 VLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIP---GSLSR 339 (959)
Q Consensus 263 ~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~---~~~~~ 339 (959)
++++|++++. ..+..+..+++|+.|++++|++++..+ ..+..
T Consensus 94 ~ls~N~i~~~-----------------------------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 138 (149)
T 2je0_A 94 NLSGNKIKDL-----------------------------------STIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKL 138 (149)
T ss_dssp ECTTSCCCSH-----------------------------------HHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHH
T ss_pred ECCCCcCCCh-----------------------------------HHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHH
Confidence 7777766410 011334445555555566666555544 46777
Q ss_pred CCCCCEEEccC
Q 002155 340 LTNLTTLDLSR 350 (959)
Q Consensus 340 l~~L~~L~Ls~ 350 (959)
+++|++|++++
T Consensus 139 l~~L~~L~l~d 149 (149)
T 2je0_A 139 LPQLTYLDGYD 149 (149)
T ss_dssp CTTCCEETTBC
T ss_pred CCCcccccCCC
Confidence 77777777653
No 391
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.56 E-value=1.4e-14 Score=142.91 Aligned_cols=131 Identities=19% Similarity=0.230 Sum_probs=94.2
Q ss_pred cEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCC
Q 002155 140 MVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSN 219 (959)
Q Consensus 140 ~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N 219 (959)
+.+++++|+++.+ |..+ .++|++|++++|.+++..+..|..+++|++|+|++|.|++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4566666666533 3322 256777777777777555566777788888888888887666666778888888888888
Q ss_pred cCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCC
Q 002155 220 LFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPI 273 (959)
Q Consensus 220 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 273 (959)
.|++..+..+..+++|++|+|++|+++++.+..|..+++|++|+|++|.+.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 888766666777888888888888888776666777888888888888776533
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=5.5e-14 Score=138.47 Aligned_cols=105 Identities=19% Similarity=0.105 Sum_probs=70.5
Q ss_pred ceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCc--cccCCCCCCEEE
Q 002155 162 TLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPY--ELGDCISLTTLD 239 (959)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~--~~~~l~~L~~L~ 239 (959)
+|+.|++++|.+++. ..|..+++|++|+|++|.|++..+..|..+++|++|+|++|.|+. +|. .+..+++|++|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCc-chhhHhhhcCCCCCEEE
Confidence 555555555555533 456677777777777777775544455777777777777777763 443 677777777777
Q ss_pred cccccCCCCCch----hhhcccCCCeeEcccccCC
Q 002155 240 LGNNNLSGLIPE----KIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 240 L~~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~ 270 (959)
+++|+++.. |. .+..+++|+.|++++|.+.
T Consensus 120 l~~N~i~~~-~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGGGS-TTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCCCc-HhHHHHHHHHCCccceeCCCcCCHH
Confidence 777777744 44 3777778888887777653
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=5.3e-14 Score=138.59 Aligned_cols=105 Identities=19% Similarity=0.139 Sum_probs=75.3
Q ss_pred cccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCc--cccCCCCCCEEE
Q 002155 138 PLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPK--EIGNLSALSVLD 215 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~--~~~~l~~L~~L~ 215 (959)
+|++|++++|++++. ..+..+++|+.|++++|.+++..+..|..+++|++|+|++|.|+ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 345555555555543 45566677777777777777544455578888888888888887 4555 788888888888
Q ss_pred ccCCcCCccCCc----cccCCCCCCEEEcccccCC
Q 002155 216 LNSNLFDGIIPY----ELGDCISLTTLDLGNNNLS 246 (959)
Q Consensus 216 L~~N~i~~~~~~----~~~~l~~L~~L~L~~N~l~ 246 (959)
+++|.++. .|. .+..+++|++||+++|.+.
T Consensus 120 l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 88888884 444 4888889999999988775
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=1.1e-15 Score=153.91 Aligned_cols=44 Identities=20% Similarity=0.203 Sum_probs=22.1
Q ss_pred ccCCcCCceEeccCCcccccCC-ccccCCCCCCEEEccCCcCCcc
Q 002155 181 VGNAAALERLVLTNNMLKGHLP-KEIGNLSALSVLDLNSNLFDGI 224 (959)
Q Consensus 181 ~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~N~i~~~ 224 (959)
+..+++|++|+|++|.|++..+ ..+..+++|++|++++|.+.+.
T Consensus 111 ~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 111 IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred cccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 4445555555555555553211 2455555555555555555443
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=2.5e-13 Score=132.70 Aligned_cols=87 Identities=28% Similarity=0.266 Sum_probs=48.6
Q ss_pred cccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccCCC-CcccCCCccccc
Q 002155 487 SYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPR-SGICQNLSKISL 565 (959)
Q Consensus 487 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l 565 (959)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+++++. ...+.+|+.+++
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 4455555555555544455555555555555555555554444555555555555555555555553 234455566666
Q ss_pred cCCCCCCC
Q 002155 566 TGNKDLCG 573 (959)
Q Consensus 566 ~~N~~~c~ 573 (959)
.+|+|.|+
T Consensus 110 ~~N~~~c~ 117 (170)
T 3g39_A 110 LNNPWDCA 117 (170)
T ss_dssp CSSCBCTT
T ss_pred CCCCCCCC
Confidence 66666664
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=3.3e-13 Score=131.76 Aligned_cols=112 Identities=19% Similarity=0.152 Sum_probs=101.8
Q ss_pred ccceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEe
Q 002155 438 NLVGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLD 517 (959)
Q Consensus 438 ~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 517 (959)
..+.+++++|+++.+|...+. .++.|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~~-----~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 84 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIPT-----TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLS 84 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCCT-----TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEEeCCCCcCccCccCCC-----CCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEE
Confidence 467899999999999877652 688999999999999999999999999999999999977777789999999999
Q ss_pred CCCCcCCCCCCccccCCCCccEEecccCcCcccCCCC
Q 002155 518 VSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS 554 (959)
Q Consensus 518 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 554 (959)
|++|+|++..+..|..+++|++|+|++|++.+..+..
T Consensus 85 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l 121 (170)
T 3g39_A 85 LNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 121 (170)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGG
T ss_pred CCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhH
Confidence 9999999888888999999999999999999887643
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.43 E-value=1.5e-15 Score=152.97 Aligned_cols=154 Identities=24% Similarity=0.266 Sum_probs=95.6
Q ss_pred CCCccccEEecCCCcccccCCc------CccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCccccc
Q 002155 39 GNWNQMESLLLSSNQFIGKIPP------EIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEK 112 (959)
Q Consensus 39 ~~l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 112 (959)
.....++.++++.+++.+.+|+ .+..+++|++|+|++|++++ +| .+..+++|++|++++|+++. +|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~-l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-CSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-ccchhhc
Confidence 3445566666666666666555 66667777777777777763 55 66666677777777776663 3445555
Q ss_pred CCCCceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccC-ccccCCcCCceEe
Q 002155 113 CSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLP-YEVGNAAALERLV 191 (959)
Q Consensus 113 l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~ 191 (959)
+++|++|++++|.+. +. | .+..+++|++|++++|.+++..+ ..+..+++|++|+
T Consensus 92 ~~~L~~L~L~~N~l~-----------------------~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~ 146 (198)
T 1ds9_A 92 ADTLEELWISYNQIA-----------------------SL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL 146 (198)
T ss_dssp HHHCSEEEEEEEECC-----------------------CH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEE
T ss_pred CCcCCEEECcCCcCC-----------------------cC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEE
Confidence 555666655555554 32 2 34555666666666666653222 3567777777777
Q ss_pred ccCCcccccCCc----------cccCCCCCCEEEccCCcCC
Q 002155 192 LTNNMLKGHLPK----------EIGNLSALSVLDLNSNLFD 222 (959)
Q Consensus 192 L~~n~i~~~~~~----------~~~~l~~L~~L~L~~N~i~ 222 (959)
+++|.+.+..|. .+..+++|+.|| +|.++
T Consensus 147 l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 147 LAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp ECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred ecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 777777655443 267788888776 56554
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=5.1e-13 Score=130.90 Aligned_cols=104 Identities=23% Similarity=0.250 Sum_probs=69.9
Q ss_pred eccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcC
Q 002155 468 MNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRL 547 (959)
Q Consensus 468 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 547 (959)
+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|+|
T Consensus 17 l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 17 VNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp EECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 344444443 3344332 5677777777777766677777777777777777777765555667777777777777777
Q ss_pred cccCCC-CcccCCCccccccCCCCCCCC
Q 002155 548 EGMVPR-SGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 548 ~~~~~~-~~~~~~l~~l~l~~N~~~c~~ 574 (959)
+++++. ...+.+|+.+++.+|+|.|++
T Consensus 94 ~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 94 KSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ceeCHHHhccccCCCEEEeCCCCccccc
Confidence 777665 345677777777888877743
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=6.4e-13 Score=130.16 Aligned_cols=110 Identities=20% Similarity=0.139 Sum_probs=87.9
Q ss_pred ceEeeccccccCCccccccchhhhhhceeccCCcccCCCCCccccCccccceeeeccccccccCCcCCcCCCCCcEEeCC
Q 002155 440 VGLYLQHNKLSGPVDELFSNSAAWKIATMNMSNNLFDGGLPRSLGNLSYLTNLDLHENKFTGEIPPDLGNLMQLEYLDVS 519 (959)
Q Consensus 440 ~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 519 (959)
+.+++++|+++.+|..++ ..++.|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP-----TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SEEECCSSCCSSCCSCCC-----TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cEEEeCCCCCCccCCCcC-----CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECC
Confidence 455666666655555443 146667777777776777888899999999999999997666667999999999999
Q ss_pred CCcCCCCCCccccCCCCccEEecccCcCcccCCCC
Q 002155 520 RNRLCGQIPETMCSLSNLLYLSLAENRLEGMVPRS 554 (959)
Q Consensus 520 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 554 (959)
+|+|++..+..|..+++|++|+|++|++.+.++..
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~ 124 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDI 124 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGG
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCcccccccH
Confidence 99999877777999999999999999999877643
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.39 E-value=1.3e-11 Score=138.65 Aligned_cols=312 Identities=11% Similarity=0.130 Sum_probs=148.5
Q ss_pred CcccCCCC-CCcEEEccCccccccCCcccccCCCCceeeecccccccccCcccCCCcccEEeccCCccccccCccccccc
Q 002155 83 PRELCTSE-SLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSE 161 (959)
Q Consensus 83 p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~ 161 (959)
..+|.+.+ .|+.+.+..+ ++.+...+|.+|++|+.+.+..|... .++.+...+|.++.
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~--------------------~l~~Ig~~aF~~c~ 114 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPS--------------------CVKKIGRQAFMFCS 114 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCC--------------------CCCEECTTTTTTCT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCC--------------------eeeEechhhchhcc
Confidence 34454442 3566665543 44455556666666666655544211 11222333344444
Q ss_pred ceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcc
Q 002155 162 TLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLG 241 (959)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 241 (959)
+|+.+.+.++ ++.....+|.++.+|+.+.+..+... ....+|....+|+.+.+..+ ++.+...+|.. .+|+.+.+.
T Consensus 115 ~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~~~~-I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip 190 (394)
T 4gt6_A 115 ELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEGVTS-VADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIP 190 (394)
T ss_dssp TCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEEC
T ss_pred cceeeccCCc-cceehhhhhhhhcccccccccceeee-ecccceecccccccccccce-eeEeccccccc-cceeEEEEC
Confidence 4444444333 22233455556666666666543322 44556666666666666544 33344445543 456666665
Q ss_pred cccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccE
Q 002155 242 NNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVD 321 (959)
Q Consensus 242 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~ 321 (959)
.+-. .+....|....+|+......+..... . ...+......... ...+.....+..
T Consensus 191 ~~~~-~i~~~af~~c~~l~~~~~~~~~~~~~-~---~~~~~~~~~~~~~-------------------~~~~~~~~~~~~ 246 (394)
T 4gt6_A 191 AKVT-RIGTNAFSECFALSTITSDSESYPAI-D---NVLYEKSANGDYA-------------------LIRYPSQREDPA 246 (394)
T ss_dssp TTCC-EECTTTTTTCTTCCEEEECCSSSCBS-S---SCEEEECTTSCEE-------------------EEECCTTCCCSE
T ss_pred Cccc-ccccchhhhccccceecccccccccc-c---ceeeccccccccc-------------------ccccccccccce
Confidence 4432 24445566666666655544332200 0 0000000000000 000011111222
Q ss_pred EEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcC
Q 002155 322 LLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKL 401 (959)
Q Consensus 322 L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i 401 (959)
+.+. +.++.+...+|..++.|+.+.+.++... +...+|.++..|+.+.+. +.++.+...+|.++.+|+.+.+..+ +
T Consensus 247 ~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v 322 (394)
T 4gt6_A 247 FKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-I 322 (394)
T ss_dssp EECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-C
T ss_pred EEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-c
Confidence 2221 2233345556666777777776655433 455566666666666664 3344344555666666666666543 4
Q ss_pred CCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeecccc
Q 002155 402 SGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNK 448 (959)
Q Consensus 402 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 448 (959)
+.+...+|.++++|+.+.+..+ ++.....+|.++++|+.+++.++.
T Consensus 323 ~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 323 TQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp CEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred cEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 4344555666666666655433 433444555555555555555543
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.39 E-value=1.8e-11 Score=137.29 Aligned_cols=331 Identities=14% Similarity=0.221 Sum_probs=203.2
Q ss_pred CcCccCCC-CCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCcc---ccccCCcccccCCCCceeeecccccccccCccc
Q 002155 59 PPEIGNCS-MLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNL---LTGTIEGVFEKCSNLSQLVIFRNHIYGSIPEYL 134 (959)
Q Consensus 59 ~~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~---l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~ 134 (959)
..+|.++. .|+.+.+..+ ++.+-..+|.++++|+.+.++.|. ++.+...+|..|.+|+.+.+..+ +
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~-------- 125 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-V-------- 125 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-C--------
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-c--------
Confidence 34577774 5888888764 555667788888999999888764 66667788988888888766433 1
Q ss_pred CCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCCcccccCCccccCCCCCCEE
Q 002155 135 SKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNMLKGHLPKEIGNLSALSVL 214 (959)
Q Consensus 135 ~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 214 (959)
+.+....|..+.+|+.+.+..+. .......|.+..+|+.+.+.++ ++.....+|.. .+|+.+
T Consensus 126 ---------------~~I~~~aF~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i 187 (394)
T 4gt6_A 126 ---------------TEIDSEAFHHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQI 187 (394)
T ss_dssp ---------------SEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEE
T ss_pred ---------------ceehhhhhhhhccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEE
Confidence 12333445555556666554432 2245566667777777777654 33244555554 567777
Q ss_pred EccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCCCCcchhhccCCCCcccccc
Q 002155 215 DLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPSKPSSYFRQANMPDLSFIQH 294 (959)
Q Consensus 215 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~l~~l~~ 294 (959)
.+..+... +...+|.++.+++......+......-..+........-...... ...
T Consensus 188 ~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~ 243 (394)
T 4gt6_A 188 HIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPS-----------------------QRE 243 (394)
T ss_dssp EECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCT-----------------------TCC
T ss_pred EECCcccc-cccchhhhccccceecccccccccccceeeccccccccccccccc-----------------------ccc
Confidence 77665443 566677777777777766655442211111111111110000000 000
Q ss_pred ccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeC
Q 002155 295 HGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGN 374 (959)
Q Consensus 295 L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 374 (959)
+..+.+. +.+......+|.++..|+.+.+.++..+ +...+|.++++|+.+.+. +.++.+...+|.++.+|+.+.+..
T Consensus 244 ~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~ 320 (394)
T 4gt6_A 244 DPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPE 320 (394)
T ss_dssp CSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCT
T ss_pred cceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCC
Confidence 1111111 1222234556777888888888765543 677788888999999886 456657778888888999999876
Q ss_pred cccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcccccccccCCccccCCCchhhhcccccceEeeccccc
Q 002155 375 NQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKL 449 (959)
Q Consensus 375 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 449 (959)
+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.++++|+.+++.++... ...+..+.+|+.+.+..|.+
T Consensus 321 ~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 321 G-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred c-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 5 55566778888999999998754 66577788999999999999887654 14566777888887766654
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.29 E-value=1.9e-13 Score=151.23 Aligned_cols=118 Identities=19% Similarity=0.114 Sum_probs=66.5
Q ss_pred ccEEeccCCccccccCcccc-----cccceeEEEcccccccc----ccCccccCCcCCceEeccCCcccccC----Cccc
Q 002155 139 LMVLDLDSNNFTGIIPVSIW-----NSETLMEFSAANNLLEG----SLPYEVGNAAALERLVLTNNMLKGHL----PKEI 205 (959)
Q Consensus 139 L~~L~ls~n~l~~~~p~~~~-----~~~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~~----~~~~ 205 (959)
|++|+|++|++++.....++ ..++|++|++++|.|+. .++..+...++|++|+|++|.|++.. +..+
T Consensus 128 L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L 207 (372)
T 3un9_A 128 ARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQL 207 (372)
T ss_dssp EEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHG
T ss_pred ccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHH
Confidence 44455555554433333322 23455555555555543 23334456667777777777776422 4455
Q ss_pred cCCCCCCEEEccCCcCCccC----CccccCCCCCCEEEcccccCCCCCchhhhcc
Q 002155 206 GNLSALSVLDLNSNLFDGII----PYELGDCISLTTLDLGNNNLSGLIPEKIADL 256 (959)
Q Consensus 206 ~~l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 256 (959)
...++|++|+|++|.|+... +..+...++|++|+|++|.|+......+..+
T Consensus 208 ~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 208 DRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp GGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred hcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 66667777777777776432 2334455677777777777765555555544
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=5e-12 Score=139.50 Aligned_cols=106 Identities=23% Similarity=0.257 Sum_probs=89.9
Q ss_pred eeccCCc-ccCCCCCccccCccccceeeecc-ccccccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEeccc
Q 002155 467 TMNMSNN-LFDGGLPRSLGNLSYLTNLDLHE-NKFTGEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAE 544 (959)
Q Consensus 467 ~L~ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 544 (959)
.++++++ .|++ +|. +..+++|+.|+|++ |+|++..+..|+++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3566666 6664 666 88889999999996 999977778899999999999999999998888999999999999999
Q ss_pred CcCcccCCCCcccCCCccccccCCCCCCCC
Q 002155 545 NRLEGMVPRSGICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 545 N~l~~~~~~~~~~~~l~~l~l~~N~~~c~~ 574 (959)
|+|+++++.......|+.|++.+|++.|+|
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCCC
Confidence 999998887655555999999999999964
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.20 E-value=1.5e-12 Score=143.95 Aligned_cols=133 Identities=17% Similarity=0.119 Sum_probs=92.8
Q ss_pred cccEEeccCCccccccCcccc-cccceeEEEccccccccccCccc-----cCCcCCceEeccCCccccc----CCccccC
Q 002155 138 PLMVLDLDSNNFTGIIPVSIW-NSETLMEFSAANNLLEGSLPYEV-----GNAAALERLVLTNNMLKGH----LPKEIGN 207 (959)
Q Consensus 138 ~L~~L~ls~n~l~~~~p~~~~-~~~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~L~~n~i~~~----~~~~~~~ 207 (959)
+|++|+|++|++++.....+. .+++|++|++++|.++......+ ...++|++|+|++|.|++. ++..+..
T Consensus 102 ~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~ 181 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAG 181 (372)
T ss_dssp CEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHT
T ss_pred CceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhc
Confidence 466677777776654433333 35788888888888875544444 2457788888888888642 3444567
Q ss_pred CCCCCEEEccCCcCCccC----CccccCCCCCCEEEcccccCCCCC----chhhhcccCCCeeEcccccCC
Q 002155 208 LSALSVLDLNSNLFDGII----PYELGDCISLTTLDLGNNNLSGLI----PEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 208 l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+++|++|+|++|.|+... +..+..+++|++|+|++|.|+... +..+...++|++|+|++|.|+
T Consensus 182 ~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 182 NTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp CSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred CCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 888888888888887432 455667778888888888887533 334455688888888888775
No 405
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.20 E-value=2.8e-11 Score=127.63 Aligned_cols=145 Identities=13% Similarity=0.030 Sum_probs=112.5
Q ss_pred HHhcCCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEE
Q 002155 676 EATNNFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 676 ~~~~~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 754 (959)
.....|++....+.|+.+.||++... ++.+++|............+.+|+++++.+. +..+.++++++...+..|+||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34457888888999999999999864 6889999986532233345888999999884 667888999888888899999
Q ss_pred EeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 002155 755 EYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF----------------------------------- 799 (959)
Q Consensus 755 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------- 799 (959)
||++|.++.+.... ......++.++++++..||...
T Consensus 90 e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 90 SEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp ECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 99999998775311 1123467889999999999610
Q ss_pred ---------------------CCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 800 ---------------------TPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 800 ---------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
...++|||++|.||+++++..+.|+||+.+.
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876566799999874
No 406
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.18 E-value=3.6e-11 Score=132.57 Aligned_cols=104 Identities=17% Similarity=0.121 Sum_probs=86.9
Q ss_pred EEecCCC-cccccCCcCccCCCCCcEEEcCC-CcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCCCceeeecc
Q 002155 46 SLLLSSN-QFIGKIPPEIGNCSMLKSISLSN-NFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSNLSQLVIFR 123 (959)
Q Consensus 46 ~L~L~~n-~l~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 123 (959)
.++++++ ++. .+|. |..+++|++|+|++ |+|++.+|..|.++++|++|+|++|+|+++++..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4688887 776 6888 88888899999986 888877777888899999999999999988888888999999999888
Q ss_pred cccccccCcccCCCcccEEeccCCcccc
Q 002155 124 NHIYGSIPEYLSKLPLMVLDLDSNNFTG 151 (959)
Q Consensus 124 n~~~~~~p~~~~~~~L~~L~ls~n~l~~ 151 (959)
|++.+.++..+..++|++|+|++|.+..
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccC
Confidence 8888777777777778888888887763
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.18 E-value=1.4e-09 Score=121.21 Aligned_cols=124 Identities=13% Similarity=0.113 Sum_probs=61.3
Q ss_pred cCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCC
Q 002155 332 KIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGN 411 (959)
Q Consensus 332 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 411 (959)
+...+|..+..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.....+|..+++|+.+.+.++.++.+...+|.+
T Consensus 231 i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 231 LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMD 308 (379)
T ss_dssp ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTT
T ss_pred EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcC
Confidence 33444455555555555443 33344445555555555555433 33233444555555555555555555444555555
Q ss_pred cccccccccCCccccCCCchhhhcccccceEeeccccccCCccccccc
Q 002155 412 LKELTHLDLSFNELDGQLPSSLSNILNLVGLYLQHNKLSGPVDELFSN 459 (959)
Q Consensus 412 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 459 (959)
+.+|+.+.|..+ ++.....+|.++.+|+.+.+..+ ++.+...+|.+
T Consensus 309 c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~ 354 (379)
T 4h09_A 309 CVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEG 354 (379)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred CCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhC
Confidence 555555555433 33333445555555555555443 44455555543
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.16 E-value=1.9e-09 Score=120.30 Aligned_cols=317 Identities=12% Similarity=0.111 Sum_probs=183.5
Q ss_pred cccCCCccccEEecCCCcccccCCcCccCCCCCcEEEcCCCcCCCCCCcccCCCCCCcEEEccCccccccCCcccccCCC
Q 002155 36 SWLGNWNQMESLLLSSNQFIGKIPPEIGNCSMLKSISLSNNFLSGSIPRELCTSESLEEIDLDGNLLTGTIEGVFEKCSN 115 (959)
Q Consensus 36 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 115 (959)
+|+..-.+|+.+.+.. .++..-..+|.++++|+.++|..+ ++.+-..+|.+. +|+.+.+..+ ++.+...+|..+ +
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~ 114 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-D 114 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-C
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-C
Confidence 4455566777777764 344344557888888888888654 554555667765 6777777644 555666777665 6
Q ss_pred CceeeecccccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEccccccccccCccccCCcCCceEeccCC
Q 002155 116 LSQLVIFRNHIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEGSLPYEVGNAAALERLVLTNN 195 (959)
Q Consensus 116 L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 195 (959)
|+.+.+..+. .......+...+++...+.. .++.+....|....+++.+....+.........+ ..+
T Consensus 115 L~~i~lp~~~-~~i~~~~F~~~~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-----------~~~ 181 (379)
T 4h09_A 115 LDDFEFPGAT-TEIGNYIFYNSSVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYV-----------LYN 181 (379)
T ss_dssp CSEEECCTTC-CEECTTTTTTCCCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTE-----------EEE
T ss_pred cccccCCCcc-ccccccccccceeeeeeccc-eeeccccchhcccccccccccccccceeecccce-----------ecc
Confidence 7777776542 22333444444555544433 3444555555566666655554433221100000 000
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEcccccCCCCCchhhhcccCCCeeEcccccCCCCCCC
Q 002155 196 MLKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGNNNLSGLIPEKIADLAQLQCLVLSHNNLSGPIPS 275 (959)
Q Consensus 196 ~i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 275 (959)
... .....+.....+....+..+... +....+..+.+|+.+.+..+ +..+....|.+...|+.+.+..+ ++
T Consensus 182 ~~~-~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~----- 252 (379)
T 4h09_A 182 KNK-TILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT----- 252 (379)
T ss_dssp TTS-SEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-----
T ss_pred ccc-ceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-----
Confidence 000 12233445555666555544333 45556666677777777544 34455566777777777766543 11
Q ss_pred CCcchhhccCCCCccccccccceecCCCcCCCCCCcccCCcccccEEEccCCcCcccCCccccCCCCCCEEEccCCCCCC
Q 002155 276 KPSSYFRQANMPDLSFIQHHGVFDLSYNRLSGPIPEELGSCVVVVDLLLNNNMLSGKIPGSLSRLTNLTTLDLSRNQLTG 355 (959)
Q Consensus 276 ~~~~~~~~~~~~~l~~l~~L~~l~L~~n~l~~~~p~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~ 355 (959)
......|.++..|+.+.+..+ ++.+...+|.++++|+.+.+.++.++.
T Consensus 253 -------------------------------~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~ 300 (379)
T 4h09_A 253 -------------------------------SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIET 300 (379)
T ss_dssp -------------------------------EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCE
T ss_pred -------------------------------EeCccccceeehhcccccccc-ceeccccccccccccccccccccccce
Confidence 012234445555555555433 444556677777777777777777776
Q ss_pred CCCCCcCCCCcceEEEeeCcccCCccccccccCCCCcEEEccCCcCCCCCCCccCCcc
Q 002155 356 PIPSEFGDSIKLQGLYLGNNQLTGSIPWSLGSLGGLVKLNLTGNKLSGKVPTSFGNLK 413 (959)
Q Consensus 356 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 413 (959)
+...+|.++.+|+.+.+..+ ++.+...+|.++++|+.+.+..+ ++.+...+|.+.+
T Consensus 301 I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 301 LEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred ehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 66777777777888777654 55456667888888888877654 5545666776653
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.03 E-value=2.1e-10 Score=120.87 Aligned_cols=129 Identities=15% Similarity=0.067 Sum_probs=95.4
Q ss_pred ccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc--eeccccceecCCceEEEEEeccCCCHHHH
Q 002155 688 GDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN--LVPLLGYCSFDEEKLLVYEYMVNGSLDLW 765 (959)
Q Consensus 688 g~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 765 (959)
+.|..+.||++...+|+.+++|..... ....+..|+.+++.+.+.+ +.+++++...++..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 456669999998877888999987643 2245678999998886544 456888877777889999999998884
Q ss_pred HhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------------
Q 002155 766 LRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF---------------------------------------------- 799 (959)
Q Consensus 766 l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------------- 799 (959)
... .. ...++.++++.+..||...
T Consensus 104 ~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1nd4_A 104 SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR 173 (264)
T ss_dssp TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence 111 11 1256777777888887421
Q ss_pred ---------CCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 800 ---------TPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 800 ---------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
..+++|||++|.||++++++.+.|+|||.+..
T Consensus 174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998776677999998753
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=4.3e-10 Score=123.04 Aligned_cols=84 Identities=13% Similarity=0.127 Sum_probs=48.6
Q ss_pred CCcCCceEeccCCcccccCCcccc---CCCCCCEEEccCCcCCccC----CccccCCCCCCEEEcccccCCCCCchhhhc
Q 002155 183 NAAALERLVLTNNMLKGHLPKEIG---NLSALSVLDLNSNLFDGII----PYELGDCISLTTLDLGNNNLSGLIPEKIAD 255 (959)
Q Consensus 183 ~l~~L~~L~L~~n~i~~~~~~~~~---~l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 255 (959)
.+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.|+... +..+..+++|+.|+|++|.|+......+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 456777777777776643333332 3567777777777776532 233345677777777777766433333332
Q ss_pred -ccCCCeeEccccc
Q 002155 256 -LAQLQCLVLSHNN 268 (959)
Q Consensus 256 -l~~L~~L~Ls~N~ 268 (959)
+ ...++++.++
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 3456666654
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.84 E-value=4.9e-09 Score=115.87 Aligned_cols=141 Identities=17% Similarity=0.232 Sum_probs=104.1
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEcc--ccc-hhhHHHHHHHHHHHhcCCC--CceeccccceecC---CceEEEEE
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLS--QAK-TQGHREFTAEMETLGKVKH--QNLVPLLGYCSFD---EEKLLVYE 755 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~---~~~~lv~e 755 (959)
.+.++.|.++.||++... +..+++|+.. ... ......+.+|+.+++.+.. ..+.++++++.+. +..|+|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 457899999999999875 4678898876 322 1223467789999998873 4577888877665 45899999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF------------------------------------ 799 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 799 (959)
|++|..+.+.. ...++..++..++.++++.|+.||...
T Consensus 122 ~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 122 FVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred ecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99998774311 123567788889999999999999520
Q ss_pred -------------------CCCeEeCCCCCCCEEECCCCc--EEEcccccccc
Q 002155 800 -------------------TPHIIHRDIKASNILLNEEFE--AKVADFGLARL 831 (959)
Q Consensus 800 -------------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~ 831 (959)
..+++|||+++.||+++.++. +.++||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999987753 68999999864
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.81 E-value=1e-09 Score=120.13 Aligned_cols=84 Identities=11% Similarity=0.125 Sum_probs=60.3
Q ss_pred cccceeEEEccccccccccCcccc---CCcCCceEeccCCcccccC----CccccCCCCCCEEEccCCcCCccCCccccC
Q 002155 159 NSETLMEFSAANNLLEGSLPYEVG---NAAALERLVLTNNMLKGHL----PKEIGNLSALSVLDLNSNLFDGIIPYELGD 231 (959)
Q Consensus 159 ~~~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 231 (959)
.+++|++|.+.+|.+.+..+..+. .+++|++|+|+.|.|++.. +..+..+++|+.|+|++|.|+...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 467888888888877654433333 5789999999999998643 333456789999999999887554444443
Q ss_pred -CCCCCEEEccccc
Q 002155 232 -CISLTTLDLGNNN 244 (959)
Q Consensus 232 -l~~L~~L~L~~N~ 244 (959)
+ ...++++.++
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 3 4678999887
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.76 E-value=2.5e-09 Score=115.26 Aligned_cols=186 Identities=20% Similarity=0.224 Sum_probs=118.5
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCc--eeccccceecCC---ceEEEEEec
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQN--LVPLLGYCSFDE---EKLLVYEYM 757 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~ 757 (959)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++++....+ ..|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 56899986533 33456889999998874 322 334444333222 348999999
Q ss_pred cCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 002155 758 VNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG--------------------------------------- 798 (959)
Q Consensus 758 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------------------------------------- 798 (959)
+|.++.+.... .++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 99 KGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 99888653321 245667777888888888888841
Q ss_pred ----------------CCCCeEeCCCCCCCEEECC--CCcEEEcccccccccccccccccc--c-----------ccccc
Q 002155 799 ----------------FTPHIIHRDIKASNILLNE--EFEAKVADFGLARLISACETHVST--D-----------IAGTF 847 (959)
Q Consensus 799 ----------------~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~--~-----------~~gt~ 847 (959)
....++|+|++|.||++++ +..+.++||+.+..-.....-... . +....
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 0135799999999999988 456789999998653211000000 0 00000
Q ss_pred cccC-CCcCCCCCCCCcCcchhHHHHHHHHHhCCCCC
Q 002155 848 GYIP-PEYGQSGRSTTRGDVYSFGVILLELVTGKEPT 883 (959)
Q Consensus 848 ~y~a-PE~~~~~~~~~~~DvwslG~il~elltg~~p~ 883 (959)
++.. |+.... .....+.|++|.++|++.+|..+|
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1111 111110 112258999999999999999875
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.41 E-value=8.8e-07 Score=95.83 Aligned_cols=137 Identities=16% Similarity=0.187 Sum_probs=97.6
Q ss_pred CCCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCC---C-ceeccccceecCCceEEEEE
Q 002155 680 NFCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKH---Q-NLVPLLGYCSFDEEKLLVYE 755 (959)
Q Consensus 680 ~f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~-niv~~~~~~~~~~~~~lv~e 755 (959)
.+...+.++.|..+.||++ |+.+++|+..... ....+.+|.++++.+.+ + .+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4555678999999999998 6778999765322 23457889988888865 1 23344433 56799999
Q ss_pred eccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 002155 756 YMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF------------------------------------ 799 (959)
Q Consensus 756 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 799 (959)
|++|.++.+.... .++..++..++.++++.++.||...
T Consensus 108 ~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 108 YIKGERITYEQYH------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp CCCCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ecCCccccccccc------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 9999888643211 2445566667777777777777321
Q ss_pred ------------------------CCCeEeCCCCCCCEEECCCCcEEEccccccccc
Q 002155 800 ------------------------TPHIIHRDIKASNILLNEEFEAKVADFGLARLI 832 (959)
Q Consensus 800 ------------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 832 (959)
...++|+|++|.||+++.+..+.++||+.+..-
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124599999999999998766799999998643
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.41 E-value=6.6e-08 Score=95.31 Aligned_cols=114 Identities=14% Similarity=0.136 Sum_probs=71.0
Q ss_pred cccccceeEEEcccc-cccc----ccCccccCCcCCceEeccCCccccc----CCccccCCCCCCEEEccCCcCCcc---
Q 002155 157 IWNSETLMEFSAANN-LLEG----SLPYEVGNAAALERLVLTNNMLKGH----LPKEIGNLSALSVLDLNSNLFDGI--- 224 (959)
Q Consensus 157 ~~~~~~L~~L~l~~n-~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N~i~~~--- 224 (959)
+...+.|++|++++| .+.. .+...+...++|++|+|++|.|.+. +...+...+.|++|+|++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 334455555555555 5542 2334455567777777777777642 234445557788888888877643
Q ss_pred -CCccccCCCCCCEEEc--ccccCCCCC----chhhhcccCCCeeEcccccCC
Q 002155 225 -IPYELGDCISLTTLDL--GNNNLSGLI----PEKIADLAQLQCLVLSHNNLS 270 (959)
Q Consensus 225 -~~~~~~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~ 270 (959)
+...+...++|++|+| ++|.|+... .+.+...++|++|+|++|.+.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3455666677888888 778776432 334455577888888877764
No 416
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.33 E-value=1.8e-06 Score=91.34 Aligned_cols=75 Identities=20% Similarity=0.239 Sum_probs=59.3
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCC---ceeccccceecCCceEEEEEeccCC
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ---NLVPLLGYCSFDEEKLLVYEYMVNG 760 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~g 760 (959)
.+.||.|.++.||++...+|+.++||+...........+..|++.++.+++. .+.+++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 4679999999999999888999999996543333345788999999999875 466666542 479999999998
Q ss_pred CH
Q 002155 761 SL 762 (959)
Q Consensus 761 ~L 762 (959)
.+
T Consensus 96 ~~ 97 (288)
T 3d1u_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.30 E-value=1.3e-07 Score=97.75 Aligned_cols=59 Identities=25% Similarity=0.363 Sum_probs=32.4
Q ss_pred ccccCccccceeeeccccccccCCcCCcCCC--CCcEEeCCCCcCCCCCCc-------cccCCCCccEEe
Q 002155 481 RSLGNLSYLTNLDLHENKFTGEIPPDLGNLM--QLEYLDVSRNRLCGQIPE-------TMCSLSNLLYLS 541 (959)
Q Consensus 481 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 541 (959)
..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++..|+ .+..+|+|+.||
T Consensus 190 ~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 190 SIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp THHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3344566666666666666643 2233333 666666666666654442 245566666554
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.29 E-value=1.9e-07 Score=96.48 Aligned_cols=80 Identities=25% Similarity=0.246 Sum_probs=51.2
Q ss_pred cCCcCCceEeccCCcccc--cCCccccCCCCCCEEEccCCcCCccCCccccCCC--CCCEEEcccccCCCCCc-------
Q 002155 182 GNAAALERLVLTNNMLKG--HLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCI--SLTTLDLGNNNLSGLIP------- 250 (959)
Q Consensus 182 ~~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~------- 250 (959)
.++++|+.|+|++|+|++ .++..+..+++|+.|+|++|.|++. ..+..+. +|++|+|++|.+.+..|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 456777777777777775 3345566777777777777777644 2333333 67777777777765333
Q ss_pred hhhhcccCCCeeE
Q 002155 251 EKIADLAQLQCLV 263 (959)
Q Consensus 251 ~~~~~l~~L~~L~ 263 (959)
..+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2466677777665
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.29 E-value=3.3e-06 Score=88.96 Aligned_cols=135 Identities=18% Similarity=0.129 Sum_probs=95.3
Q ss_pred eeccCCCe-EEEEEEcC-CCCEEEEEEccccchhhHHHHHHHHHHHhcCC-CCceeccccceecCCceEEEEEeccCCCH
Q 002155 686 IIGDGGFG-TVYKAALP-DGKTVAVKKLSQAKTQGHREFTAEMETLGKVK-HQNLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 686 ~lg~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
.+..|..| .||+.... ++..+++|+-... ...++.+|...++.+. +-.+.++++++.+++..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556665 69998765 4678999986532 3456778999888774 33466778888888899999999999888
Q ss_pred HHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 002155 763 DLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGF------------------------------------------- 799 (959)
Q Consensus 763 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------- 799 (959)
.+...... .....++.+++..+..||...
T Consensus 108 ~~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 76543321 122345555666666666321
Q ss_pred ------------CCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 800 ------------TPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 800 ------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
...++|+|+.+.||++++++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999877777999998853
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.20 E-value=6.4e-06 Score=88.27 Aligned_cols=136 Identities=21% Similarity=0.189 Sum_probs=89.8
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCC---ceecccccee-cCCceEEEEEeccC
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ---NLVPLLGYCS-FDEEKLLVYEYMVN 759 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~ 759 (959)
.+.++.|....||+. |..+++|+... ......+..|.++++.+.+. .+.+++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 346888999999988 56789998532 23345788999999998753 2455555553 45567899999999
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHG----------------------------------------- 798 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~----------------------------------------- 798 (959)
..+.+..-. .++..++..++.++++.++.||..
T Consensus 98 ~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 98 QILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp EECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred eECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 888652110 112233333333344333333321
Q ss_pred ----------------CCCCeEeCCCCCCCEEECC---CCc-EEEcccccccc
Q 002155 799 ----------------FTPHIIHRDIKASNILLNE---EFE-AKVADFGLARL 831 (959)
Q Consensus 799 ----------------~~~~ivH~dlk~~Nill~~---~~~-~kl~Dfg~~~~ 831 (959)
....++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1446799999999999987 455 48999998754
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.17 E-value=2.8e-07 Score=90.72 Aligned_cols=121 Identities=13% Similarity=0.127 Sum_probs=75.2
Q ss_pred CcccccCCCCceeeeccc-ccccccCcccCCCcccEEeccCCccccccCcccccccceeEEEcccccccc----ccCccc
Q 002155 107 EGVFEKCSNLSQLVIFRN-HIYGSIPEYLSKLPLMVLDLDSNNFTGIIPVSIWNSETLMEFSAANNLLEG----SLPYEV 181 (959)
Q Consensus 107 ~~~~~~l~~L~~L~L~~n-~~~~~~p~~~~~~~L~~L~ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~----~~~~~~ 181 (959)
...+...++|++|+|++| .+...-... +...+...++|++|+|++|.|.. .+...+
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~-------------------l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L 89 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKA-------------------CAEALKTNTYVKKFSIVGTRSNDPVAFALAEML 89 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHH-------------------HHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHH-------------------HHHHHHhCCCcCEEECcCCCCChHHHHHHHHHH
Confidence 345556677777777776 654321110 11122223444444444444442 223445
Q ss_pred cCCcCCceEeccCCccccc----CCccccCCCCCCEEEc--cCCcCCcc----CCccccCCCCCCEEEcccccCC
Q 002155 182 GNAAALERLVLTNNMLKGH----LPKEIGNLSALSVLDL--NSNLFDGI----IPYELGDCISLTTLDLGNNNLS 246 (959)
Q Consensus 182 ~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L--~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~ 246 (959)
...++|++|+|++|.|.+. +..++...+.|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 90 ~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 90 KVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 5567888888888888753 4566777788999999 88988754 3345556688999999999886
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.04 E-value=1.2e-05 Score=88.33 Aligned_cols=142 Identities=13% Similarity=0.144 Sum_probs=88.4
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc--eeccccceecC-CceEEEEEeccCC
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN--LVPLLGYCSFD-EEKLLVYEYMVNG 760 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~e~~~~g 760 (959)
.+.++.|....+|+... +++.+++|..... ..+..|+.+++.+.... +.++++++... +..|+||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 45688999999999886 5788999987532 25778888888886533 45566665544 5689999999986
Q ss_pred CHHHH------------------HhhhcCCc----c---------ccCHHHH---------------------HHHHHHH
Q 002155 761 SLDLW------------------LRNRTGSL----E---------VLGWDKR---------------------YKIACGA 788 (959)
Q Consensus 761 ~L~~~------------------l~~~~~~~----~---------~l~~~~~---------------------~~i~~~i 788 (959)
.+.+. ++...... . .-.|... ......+
T Consensus 120 ~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 199 (362)
T 3ovc_A 120 TLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQAL 199 (362)
T ss_dssp ETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHH
Confidence 65321 11110000 0 0011111 0111112
Q ss_pred HHHHHHHHhc-CCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 789 ARGLAFLHHG-FTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 789 ~~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
....+++... ....++|+|+++.||++++++.+.|+||+.+..
T Consensus 200 ~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 200 DELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 2222233211 025789999999999998777788999998865
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.02 E-value=1.9e-06 Score=82.42 Aligned_cols=84 Identities=12% Similarity=0.064 Sum_probs=54.3
Q ss_pred cCCceEeccCCcccccCCccccCCCCCCEEEccCCc-CCccCCccccCC----CCCCEEEcccc-cCCCCCchhhhcccC
Q 002155 185 AALERLVLTNNMLKGHLPKEIGNLSALSVLDLNSNL-FDGIIPYELGDC----ISLTTLDLGNN-NLSGLIPEKIADLAQ 258 (959)
Q Consensus 185 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l----~~L~~L~L~~N-~l~~~~~~~~~~l~~ 258 (959)
.+|++|||+++.|++..-..+.++++|+.|+|++|. |+...-..++.+ ++|++|+|++| +|++..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 456677777776666555666677777777777773 554433444443 35777777776 366555556677777
Q ss_pred CCeeEccccc
Q 002155 259 LQCLVLSHNN 268 (959)
Q Consensus 259 L~~L~Ls~N~ 268 (959)
|++|+|++|.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777764
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.97 E-value=6.9e-06 Score=90.36 Aligned_cols=79 Identities=6% Similarity=-0.008 Sum_probs=53.9
Q ss_pred Cee-ccCCCeEEEEEEcC-------CCCEEEEEEccccc---hhhHHHHHHHHHHHhcCCC---CceeccccceecC---
Q 002155 685 NII-GDGGFGTVYKAALP-------DGKTVAVKKLSQAK---TQGHREFTAEMETLGKVKH---QNLVPLLGYCSFD--- 747 (959)
Q Consensus 685 ~~l-g~G~~g~V~~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~~--- 747 (959)
+.| +.|....+|+.... +++.+++|...... ......+..|+.+++.+.. -.+.++++++...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 88889999998764 26789999865432 1012356778888887742 2466677766544
Q ss_pred CceEEEEEeccCCCHH
Q 002155 748 EEKLLVYEYMVNGSLD 763 (959)
Q Consensus 748 ~~~~lv~e~~~~g~L~ 763 (959)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999987654
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.87 E-value=5.6e-06 Score=79.11 Aligned_cols=85 Identities=11% Similarity=0.048 Sum_probs=53.5
Q ss_pred ceeEEEccccccccccCccccCCcCCceEeccCCc-ccccCCccccCC----CCCCEEEccCCc-CCccCCccccCCCCC
Q 002155 162 TLMEFSAANNLLEGSLPYEVGNAAALERLVLTNNM-LKGHLPKEIGNL----SALSVLDLNSNL-FDGIIPYELGDCISL 235 (959)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l----~~L~~L~L~~N~-i~~~~~~~~~~l~~L 235 (959)
+|++|+++++.|+...-..+.++++|++|+|++|. |++..-..+..+ ++|++|+|++|. |+...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444444444444444455667777777777774 665555556654 367888887774 765555566777888
Q ss_pred CEEEccccc-CC
Q 002155 236 TTLDLGNNN-LS 246 (959)
Q Consensus 236 ~~L~L~~N~-l~ 246 (959)
++|+|++|. ++
T Consensus 142 ~~L~L~~c~~It 153 (176)
T 3e4g_A 142 KYLFLSDLPGVK 153 (176)
T ss_dssp CEEEEESCTTCC
T ss_pred CEEECCCCCCCC
Confidence 888888874 44
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.85 E-value=0.0001 Score=80.37 Aligned_cols=141 Identities=16% Similarity=0.238 Sum_probs=79.4
Q ss_pred CeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCC--Cceecccc------ceecCCceEEEEEe
Q 002155 685 NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKH--QNLVPLLG------YCSFDEEKLLVYEY 756 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~------~~~~~~~~~lv~e~ 756 (959)
+.|+.|..+.||++...+| .+++|+..... ..+..|..+++.+.. -.+.+++. +...++..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466678899999987554 58999887521 233345555554431 12333333 11345677999999
Q ss_pred ccCCCHH-----H---------HHhhhcC-C--c-------cccCHHHH-------------------------------
Q 002155 757 MVNGSLD-----L---------WLRNRTG-S--L-------EVLGWDKR------------------------------- 781 (959)
Q Consensus 757 ~~~g~L~-----~---------~l~~~~~-~--~-------~~l~~~~~------------------------------- 781 (959)
++|..+. . .++.... . . ..-.|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 1 1121111 0 0 01122211
Q ss_pred HHHHHHHHHHHHHHHh----------cCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 782 YKIACGAARGLAFLHH----------GFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 782 ~~i~~~i~~~l~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
..+...+..++++|+. ....+++|||+++.||+++.++.+.++||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666652 025789999999999999888899999999874
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.75 E-value=4.3e-05 Score=85.26 Aligned_cols=75 Identities=15% Similarity=0.103 Sum_probs=48.6
Q ss_pred CCeeccCCCeEEEEEEcC-CCCEEEEEEccccch-------hhHHHHHHHHHHHhcCCC--Cc-eeccccceecCCceEE
Q 002155 684 TNIIGDGGFGTVYKAALP-DGKTVAVKKLSQAKT-------QGHREFTAEMETLGKVKH--QN-LVPLLGYCSFDEEKLL 752 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~n-iv~~~~~~~~~~~~~l 752 (959)
.+.+|.|.++.||+++.. +++.++||....... .....+..|.++++.+.. |. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 456999999999999764 468899997643211 123446678888887742 33 3344433 3456789
Q ss_pred EEEeccCC
Q 002155 753 VYEYMVNG 760 (959)
Q Consensus 753 v~e~~~~g 760 (959)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.60 E-value=0.00029 Score=74.61 Aligned_cols=78 Identities=19% Similarity=0.256 Sum_probs=56.9
Q ss_pred CCCCCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCC---ceeccccceecCCceEEEEEec
Q 002155 681 FCKTNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ---NLVPLLGYCSFDEEKLLVYEYM 757 (959)
Q Consensus 681 f~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~ 757 (959)
..-.+.+|.|..+.||+.+..||+.|+||+...........+..|++.|+.+.-. .+.+++++ +..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEee
Confidence 3345679999999999999999999999987654444445688899998888422 23444433 3458999999
Q ss_pred cCCCH
Q 002155 758 VNGSL 762 (959)
Q Consensus 758 ~~g~L 762 (959)
+++..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87654
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.59 E-value=0.00022 Score=75.81 Aligned_cols=139 Identities=18% Similarity=0.182 Sum_probs=91.2
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCC---CCceeccccceecCCceEEEEEeccCC
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVK---HQNLVPLLGYCSFDEEKLLVYEYMVNG 760 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~g 760 (959)
.+.|+.|....+|+... ++..+++|+.... ....+..|.+.++.+. ...+.+++++...++..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 35689999999999987 5678999987543 2456788998888884 256778888877778899999999987
Q ss_pred CHHH-----------HHhhhcC--C----------------ccccCHHHHH---HHH----------------HHHHHH-
Q 002155 761 SLDL-----------WLRNRTG--S----------------LEVLGWDKRY---KIA----------------CGAARG- 791 (959)
Q Consensus 761 ~L~~-----------~l~~~~~--~----------------~~~l~~~~~~---~i~----------------~~i~~~- 791 (959)
.+.. .++.... . ...-+|.... ++. ..++..
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 1222211 0 0011344322 111 111111
Q ss_pred HHHHH-hcCCCCeEeCCCCCCCEEECCCCcEEEcccc
Q 002155 792 LAFLH-HGFTPHIIHRDIKASNILLNEEFEAKVADFG 827 (959)
Q Consensus 792 l~~LH-~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 827 (959)
...|. ......++|+|+.+.|++++.++ +.+.|++
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 22332 12256899999999999999887 8899974
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.42 E-value=0.00029 Score=79.12 Aligned_cols=79 Identities=9% Similarity=0.120 Sum_probs=48.3
Q ss_pred CCCeEeCCCCCCCEEECCCCcEEEccccccccccccccccccccc-ccccccCCCcCCCC---CCCCcCcchhHHHHHHH
Q 002155 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHVSTDIA-GTFGYIPPEYGQSG---RSTTRGDVYSFGVILLE 875 (959)
Q Consensus 800 ~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~-gt~~y~aPE~~~~~---~~~~~~DvwslG~il~e 875 (959)
...++|||++|.||+++.++ ++++||+.+..-...-. ...... -...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 67899999999999998876 99999998865321111 000000 11345666544311 11223445577888888
Q ss_pred HHhCC
Q 002155 876 LVTGK 880 (959)
Q Consensus 876 lltg~ 880 (959)
.+++.
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87753
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.37 E-value=0.00022 Score=64.94 Aligned_cols=38 Identities=24% Similarity=0.210 Sum_probs=20.8
Q ss_pred ccEEecccCcCcccCCCC-cccCCCccccccCCCCCCCC
Q 002155 537 LLYLSLAENRLEGMVPRS-GICQNLSKISLTGNKDLCGK 574 (959)
Q Consensus 537 L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~~~c~~ 574 (959)
|++|+|++|+|+.+++.. ..+.+|+.+++.+|||.|+|
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC 71 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDC 71 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSG
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccC
Confidence 444444444444444332 12344556678889999964
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.27 E-value=0.0001 Score=71.86 Aligned_cols=109 Identities=19% Similarity=0.174 Sum_probs=65.3
Q ss_pred cceeEEEcccc-cccc----ccCccccCCcCCceEeccCCcccccC----CccccCCCCCCEEEccCCcCCccC----Cc
Q 002155 161 ETLMEFSAANN-LLEG----SLPYEVGNAAALERLVLTNNMLKGHL----PKEIGNLSALSVLDLNSNLFDGII----PY 227 (959)
Q Consensus 161 ~~L~~L~l~~n-~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~N~i~~~~----~~ 227 (959)
+.|++|+|++| .|.. .+-+.+..-+.|+.|+|++|.|.+.. .+++..-+.|+.|+|++|.|+... .+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 34444444443 4432 23344555677778888888776533 333445677888888888886432 33
Q ss_pred cccCCCCCCEEEcccc---cCCCC----CchhhhcccCCCeeEcccccC
Q 002155 228 ELGDCISLTTLDLGNN---NLSGL----IPEKIADLAQLQCLVLSHNNL 269 (959)
Q Consensus 228 ~~~~l~~L~~L~L~~N---~l~~~----~~~~~~~l~~L~~L~Ls~N~l 269 (959)
++..-+.|++|+|++| .+... +.+.+..-+.|+.|+++.|.+
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 4455567888888765 33321 234566667888888877654
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.15 E-value=0.0033 Score=67.70 Aligned_cols=161 Identities=15% Similarity=0.131 Sum_probs=90.3
Q ss_pred cccCHHHHHHHhcCCCC-----CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc--eec
Q 002155 667 MRLTLVHILEATNNFCK-----TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN--LVP 739 (959)
Q Consensus 667 ~~~~~~~~~~~~~~f~~-----~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~ 739 (959)
..++.+.+......|.. ...++ |....||++...+|+.+++|...... .....+..|..+++.+.... +++
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence 34455555555444433 23466 88889999887778789999986321 12345667888777774222 344
Q ss_pred cccc-----eecCCceEEEEEeccCCCHH-----HH---------HhhhcC-----CccccCHHHH----HHH-------
Q 002155 740 LLGY-----CSFDEEKLLVYEYMVNGSLD-----LW---------LRNRTG-----SLEVLGWDKR----YKI------- 784 (959)
Q Consensus 740 ~~~~-----~~~~~~~~lv~e~~~~g~L~-----~~---------l~~~~~-----~~~~l~~~~~----~~i------- 784 (959)
++.. ...++..++||||++|..+. .+ ++.... .....++... ..+
T Consensus 87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (328)
T 1zyl_A 87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI 166 (328)
T ss_dssp CCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred eeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcC
Confidence 4443 12245567899999875432 11 111110 0011222110 000
Q ss_pred --------HHHHHHHHHHHHhc----CCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 785 --------ACGAARGLAFLHHG----FTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 785 --------~~~i~~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
...+...++.+... ....++|||+++.||+++ + .+.++||+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 167 PSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111222332211 145789999999999999 4 899999988753
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.14 E-value=0.00097 Score=71.78 Aligned_cols=160 Identities=10% Similarity=0.098 Sum_probs=88.1
Q ss_pred cCHHHHHHHhcCCCCC-----CeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc--eeccc
Q 002155 669 LTLVHILEATNNFCKT-----NIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN--LVPLL 741 (959)
Q Consensus 669 ~~~~~~~~~~~~f~~~-----~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~ 741 (959)
++.+++.....+|... +.|+.|....+|++...+| .+++|...... ....+..|..+++.+...+ +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 4455565555566653 3466788899999987655 68899876521 1234556777777664222 23333
Q ss_pred cc------eecCCceEEEEEeccCCCHHH--------------HHhhhcC---Cc-----cccCHHHHHH----------
Q 002155 742 GY------CSFDEEKLLVYEYMVNGSLDL--------------WLRNRTG---SL-----EVLGWDKRYK---------- 783 (959)
Q Consensus 742 ~~------~~~~~~~~lv~e~~~~g~L~~--------------~l~~~~~---~~-----~~l~~~~~~~---------- 783 (959)
.. ....+..++||+|++|..+.. .++.... .. ....|...+.
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 122356789999999865311 1121110 00 0011222110
Q ss_pred --HHHHHHHHHHHHHhc----CCCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 784 --IACGAARGLAFLHHG----FTPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 784 --i~~~i~~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
+...+.+.+++++.. ...+++|+|+.+.||++++++.+.++||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011134445555421 135799999999999998876668999998753
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.10 E-value=0.0013 Score=69.95 Aligned_cols=71 Identities=10% Similarity=0.064 Sum_probs=44.5
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCce-eccccceecCCceEEEEEec-cCCC
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL-VPLLGYCSFDEEKLLVYEYM-VNGS 761 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~g~ 761 (959)
.+.|+.|....+|++ +.+++|+....... ..+...|+.+++.+...++ .+++++ ..+.-++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 567999999999998 56888887643211 1123467777777643333 344443 344568999999 6554
Q ss_pred H
Q 002155 762 L 762 (959)
Q Consensus 762 L 762 (959)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.07 E-value=0.0029 Score=68.31 Aligned_cols=141 Identities=16% Similarity=0.113 Sum_probs=72.6
Q ss_pred eeccCCCeE-EEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCC--ceeccccceecCCceEEEEEeccCCCH
Q 002155 686 IIGDGGFGT-VYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQ--NLVPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 686 ~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
.|+.|+... +|+....+|+.+++|....... ..+..|+.+++.+... .+.+++.+.... -++|||++++..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcch
Confidence 465555554 6777764477788876543221 2234566666666322 244555543322 3789999987777
Q ss_pred HHHHhhhcC----------------------CccccCHHHHH-------H-H------------HHHHHHHHHHHH---h
Q 002155 763 DLWLRNRTG----------------------SLEVLGWDKRY-------K-I------------ACGAARGLAFLH---H 797 (959)
Q Consensus 763 ~~~l~~~~~----------------------~~~~l~~~~~~-------~-i------------~~~i~~~l~~LH---~ 797 (959)
.+++..... ....++..... . + ...+...++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 655432110 00111111100 0 0 001112222221 1
Q ss_pred cCCCCeEeCCCCCCCEEECCC----CcEEEcccccccc
Q 002155 798 GFTPHIIHRDIKASNILLNEE----FEAKVADFGLARL 831 (959)
Q Consensus 798 ~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~ 831 (959)
.....++|||+.+.||+++.+ +.+.++||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 114689999999999999875 6899999998864
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.00 E-value=0.00018 Score=70.09 Aligned_cols=86 Identities=14% Similarity=0.201 Sum_probs=55.8
Q ss_pred cceeEEEcccccccc----ccCccccCCcCCceEeccCCccccc----CCccccCCCCCCEEEccCC---cCCcc----C
Q 002155 161 ETLMEFSAANNLLEG----SLPYEVGNAAALERLVLTNNMLKGH----LPKEIGNLSALSVLDLNSN---LFDGI----I 225 (959)
Q Consensus 161 ~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N---~i~~~----~ 225 (959)
+.|++|+|++|.|.. .+.+.+..-+.|++|+|++|.|.+. +.+++..-+.|++|+|++| .|... +
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~i 149 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM 149 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHH
Confidence 445555555555542 2234445667888888888888753 3345666778999999865 44422 3
Q ss_pred CccccCCCCCCEEEcccccCC
Q 002155 226 PYELGDCISLTTLDLGNNNLS 246 (959)
Q Consensus 226 ~~~~~~l~~L~~L~L~~N~l~ 246 (959)
...+..-+.|++|+++.|.+.
T Consensus 150 a~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 150 MMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHhCCCcCeEeccCCCcc
Confidence 445666788999999887654
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.00 E-value=0.001 Score=60.47 Aligned_cols=60 Identities=20% Similarity=0.197 Sum_probs=46.2
Q ss_pred ceeeecccccc-ccCCcCCcCCCCCcEEeCCCCcCCCCCCccccCCCCccEEecccCcCcccC
Q 002155 490 TNLDLHENKFT-GEIPPDLGNLMQLEYLDVSRNRLCGQIPETMCSLSNLLYLSLAENRLEGMV 551 (959)
Q Consensus 490 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 551 (959)
..++.+++.++ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|+.|+|++|++...-
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC 71 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDC 71 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSG
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccC
Confidence 36777788775 35665543 46889999999998777788888999999999999887543
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.89 E-value=0.0017 Score=71.03 Aligned_cols=143 Identities=15% Similarity=0.141 Sum_probs=82.5
Q ss_pred CCeeccCCCeEEEEEEcC--------CCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc-eeccccceecCCceEEEE
Q 002155 684 TNIIGDGGFGTVYKAALP--------DGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN-LVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 754 (959)
.+.+..|-...+|++... +++.|++|+.... ......+.+|.++++.+...+ ..++++++.. .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 346777888999999874 2478999986332 223455668998888874322 3455655532 3999
Q ss_pred EeccCCCHHH-----------H------HhhhcC-Ccccc--CHHHHHHHHHHHHH-------------------HHHHH
Q 002155 755 EYMVNGSLDL-----------W------LRNRTG-SLEVL--GWDKRYKIACGAAR-------------------GLAFL 795 (959)
Q Consensus 755 e~~~~g~L~~-----------~------l~~~~~-~~~~l--~~~~~~~i~~~i~~-------------------~l~~L 795 (959)
||++|..+.. . ++.... ..... -+.+..++..++.. .++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999865531 0 111110 01111 23445555544322 12222
Q ss_pred ----Hh-cCCCCeEeCCCCCCCEEECCC----CcEEEcccccccc
Q 002155 796 ----HH-GFTPHIIHRDIKASNILLNEE----FEAKVADFGLARL 831 (959)
Q Consensus 796 ----H~-~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~ 831 (959)
.. .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 113468999999999999876 7899999998864
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.75 E-value=0.0014 Score=73.38 Aligned_cols=73 Identities=19% Similarity=0.203 Sum_probs=48.5
Q ss_pred CCeeccCCCeEEEEEEcCC--------CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCce-eccccceecCCceEEEE
Q 002155 684 TNIIGDGGFGTVYKAALPD--------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL-VPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~ 754 (959)
.+.|+.|....||++...+ ++.+++|+...... ...+..|..+++.+...++ .++++.+.. .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3468888899999998653 57899998743211 1345578888888753333 455655432 3899
Q ss_pred EeccCCCH
Q 002155 755 EYMVNGSL 762 (959)
Q Consensus 755 e~~~~g~L 762 (959)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.46 E-value=0.0029 Score=69.52 Aligned_cols=73 Identities=14% Similarity=0.149 Sum_probs=43.3
Q ss_pred CeeccCCCeEEEEEEcCC---------CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc-eeccccceecCCceEEEE
Q 002155 685 NIIGDGGFGTVYKAALPD---------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN-LVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 754 (959)
+.++.|....+|++...+ ++.+++|+....... ..+...|..+++.+...+ +.++++.. .-++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec----CCcEEE
Confidence 457788889999998653 268888987543221 112356787777775333 33555433 237899
Q ss_pred EeccCCCH
Q 002155 755 EYMVNGSL 762 (959)
Q Consensus 755 e~~~~g~L 762 (959)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.25 E-value=0.0081 Score=67.46 Aligned_cols=73 Identities=12% Similarity=0.075 Sum_probs=46.5
Q ss_pred CeeccCCCeEEEEEEcCC-CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCce-eccccceecCCceEEEEEeccCCCH
Q 002155 685 NIIGDGGFGTVYKAALPD-GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNL-VPLLGYCSFDEEKLLVYEYMVNGSL 762 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g~L 762 (959)
+.|+.|-...+|++...+ +..+++|+....... .-+...|..+++.+...++ .++++++. + ..||||++|.++
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 468888899999998764 478889876432211 1122578888888865444 45666552 2 359999987544
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.08 E-value=0.016 Score=62.53 Aligned_cols=32 Identities=28% Similarity=0.377 Sum_probs=28.2
Q ss_pred CCCeEeCCCCCCCEEECCCCcEEEcccccccc
Q 002155 800 TPHIIHRDIKASNILLNEEFEAKVADFGLARL 831 (959)
Q Consensus 800 ~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 831 (959)
...++|+|+.+.||++++++.+.++||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35799999999999999888899999988754
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.03 E-value=0.021 Score=55.73 Aligned_cols=103 Identities=16% Similarity=0.124 Sum_probs=67.5
Q ss_pred CCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEcccccccccccccccc
Q 002155 760 GSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLARLISACETHV 839 (959)
Q Consensus 760 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (959)
.+|.+.++... .++++.++|.++.|.+++|.-.-. .+.-..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~---~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLYN---QPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHcC---CCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc---------
Confidence 37899998876 589999999999999999877621 11111222346899999999998774 2110
Q ss_pred cccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCC
Q 002155 840 STDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEP 882 (959)
Q Consensus 840 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 882 (959)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123456888753 3445677899999999998875555
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.64 E-value=0.029 Score=61.45 Aligned_cols=143 Identities=16% Similarity=0.149 Sum_probs=81.0
Q ss_pred CeeccCCCeEEEEEEcCC--------CCEEEEEEccccchh-----------h-------HHHHHHHHHHHhcCC-CCce
Q 002155 685 NIIGDGGFGTVYKAALPD--------GKTVAVKKLSQAKTQ-----------G-------HREFTAEMETLGKVK-HQNL 737 (959)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~-----------~-------~~~~~~e~~~l~~l~-h~ni 737 (959)
+.|..|-...+|++...+ ++.|.+++.-..... + .+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456678888999998753 367888876432211 0 112234888888775 3334
Q ss_pred eccccceecCCceEEEEEeccCCCHHH--H---------------HhhhcCC-ccccC--HHHHHHHHHHHH--------
Q 002155 738 VPLLGYCSFDEEKLLVYEYMVNGSLDL--W---------------LRNRTGS-LEVLG--WDKRYKIACGAA-------- 789 (959)
Q Consensus 738 v~~~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~~~-~~~l~--~~~~~~i~~~i~-------- 789 (959)
.++++++.. .+|+||++|.+|.. + ++..... ..... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 566666532 28999999765421 1 1111000 11111 233333433321
Q ss_pred --------------HHH----HHHHh-cCCCCeEeCCCCCCCEEECCC------CcEEEcccccccc
Q 002155 790 --------------RGL----AFLHH-GFTPHIIHRDIKASNILLNEE------FEAKVADFGLARL 831 (959)
Q Consensus 790 --------------~~l----~~LH~-~~~~~ivH~dlk~~Nill~~~------~~~kl~Dfg~~~~ 831 (959)
.-+ +++.. .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 22321 113468999999999999876 7899999998853
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.88 E-value=0.046 Score=60.48 Aligned_cols=74 Identities=8% Similarity=0.103 Sum_probs=47.8
Q ss_pred CCeeccCCCeEEEEEEcCC--------CCEEEEEEccccchhhHHHHHHHHHHHhcCCCCc-eeccccceecCCceEEEE
Q 002155 684 TNIIGDGGFGTVYKAALPD--------GKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQN-LVPLLGYCSFDEEKLLVY 754 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 754 (959)
.+.+..|-...+|++...+ ++.|++|+..... ...-+..+|.++++.+...+ ..++++.+ .-+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEE
Confidence 3467778889999998753 5789999865422 11223357888887774323 34455433 237899
Q ss_pred EeccCCCH
Q 002155 755 EYMVNGSL 762 (959)
Q Consensus 755 e~~~~g~L 762 (959)
||++|..+
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998754
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.60 E-value=0.76 Score=50.52 Aligned_cols=30 Identities=30% Similarity=0.445 Sum_probs=25.3
Q ss_pred CeEeCCCCCCCEEE------CCCCcEEEcccccccc
Q 002155 802 HIIHRDIKASNILL------NEEFEAKVADFGLARL 831 (959)
Q Consensus 802 ~ivH~dlk~~Nill------~~~~~~kl~Dfg~~~~ 831 (959)
.++|+|+.+.||++ +++..++++||-+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567899999998864
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=87.05 E-value=0.59 Score=32.24 Aligned_cols=6 Identities=17% Similarity=0.302 Sum_probs=2.5
Q ss_pred hhhhhh
Q 002155 593 AFGLAG 598 (959)
Q Consensus 593 ~~~~~~ 598 (959)
+.+++|
T Consensus 15 a~~vVG 20 (44)
T 2jwa_A 15 ISAVVG 20 (44)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333444
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=71.75 E-value=8.6 Score=37.53 Aligned_cols=114 Identities=12% Similarity=0.051 Sum_probs=74.1
Q ss_pred CCCceeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHH-HHHhcCCCCeEeCCCCCC
Q 002155 733 KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLA-FLHHGFTPHIIHRDIKAS 811 (959)
Q Consensus 733 ~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~ivH~dlk~~ 811 (959)
.||++ -..+-.+++...+.++.-+++.-...++ ..+...+++++..|+.... +++ .-+|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-------~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-------KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-------TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-------hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCc
Confidence 57777 2233355666666666543433333343 2677899999999988777 555 3478889999
Q ss_pred CEEECCCCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCC
Q 002155 812 NILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPT 883 (959)
Q Consensus 812 Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~ 883 (959)
|++++.++.+++.-.|+-..+ +|.-+. ..-=.-++=|++..++.++..|
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l------------------pP~e~~-----ee~fl~qyKali~all~~K~~F 162 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL------------------PPDEWD-----DERLLREVKATVLALTEGEYRF 162 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB------------------SSCSCC-----HHHHHHHHHHHHHHHTTCSSCH
T ss_pred eEEEeCCCcEEEEEcCCcccC------------------CCCCCC-----HHHHHHHHHHHHHHHHcCCCCH
Confidence 999999999999988875332 232211 1111224567777888888776
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=71.18 E-value=5 Score=39.04 Aligned_cols=116 Identities=6% Similarity=0.052 Sum_probs=75.8
Q ss_pred CCCceeccccceecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCC
Q 002155 733 KHQNLVPLLGYCSFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPHIIHRDIKASN 812 (959)
Q Consensus 733 ~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 812 (959)
.||+.+.. .+-..++...+.|+. ......|-.- ...+...+++++..|+....+++ . -+|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~--~~~~~~f~~i-----k~~~~~eKlr~l~ni~~l~~~~~---~--r~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDI--NDNHTPFDNI-----KSFTKNEKLRYLLNIKNLEEVNR---T--RYTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECC--CTTSEEGGGG-----GGSCHHHHHHHHHHGGGGGGGGG---S--SEECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEc--CcccCCHHHH-----HhcCHHHHHHHHHHHHHHHHHhc---C--ceEEEEecce
Confidence 57877765 344445555555543 3333333221 23677899999999999887766 2 3788899999
Q ss_pred EEECCCCcEEEcccccccccccccccccccccccccccCCCcCCCCCCCCcCcchhHHHHHHHHHhCCCCCC
Q 002155 813 ILLNEEFEAKVADFGLARLISACETHVSTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTG 884 (959)
Q Consensus 813 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~ 884 (959)
++++.++.+++.-.|+...+ +|.- .+...=.-.+=|++..+++++..|.
T Consensus 110 L~f~~~~~p~i~~RGik~~l------------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV------------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTB------------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCC------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999988875332 2221 1111112356678888999988873
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=70.82 E-value=0.58 Score=52.44 Aligned_cols=58 Identities=7% Similarity=0.040 Sum_probs=16.4
Q ss_pred CCeeccCCCeEEEEEEcCC-CCEEEE------EEccccc--hhhHHHHHHHHHHHhcCCCCceeccccce
Q 002155 684 TNIIGDGGFGTVYKAALPD-GKTVAV------KKLSQAK--TQGHREFTAEMETLGKVKHQNLVPLLGYC 744 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 744 (959)
.+.+| ||.||+|.+.. ..+||| |..+... .+....+.+|..+++..+|||+++.+++.
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 45676 99999999864 357888 6654322 22334577888999999999999988765
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=54.07 E-value=29 Score=29.08 Aligned_cols=46 Identities=15% Similarity=0.125 Sum_probs=25.8
Q ss_pred cCcccCCccccCCCCCCEEEccCCCCCCCCCCCcCCCCcceEEEeeC
Q 002155 328 MLSGKIPGSLSRLTNLTTLDLSRNQLTGPIPSEFGDSIKLQGLYLGN 374 (959)
Q Consensus 328 ~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 374 (959)
.++.+...+|.++++|+.+.|..+ ++.+...+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344455556666666666666654 3335555666666666665544
No 453
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=48.96 E-value=2.9e+02 Score=31.39 Aligned_cols=46 Identities=17% Similarity=0.109 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHH--HHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 778 WDKRYKIACGAA--RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 778 ~~~~~~i~~~i~--~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
+..+..++..+| +.+.|+= | =||=.++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL-----G--igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL-----G--VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----T--CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee-----e--ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 444445555433 3355554 2 24667899999999999999999884
No 454
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=40.98 E-value=98 Score=32.17 Aligned_cols=139 Identities=13% Similarity=0.086 Sum_probs=70.0
Q ss_pred CCeeccCCCeEEEEEEcCCCCEEEEEEccccchhhHHHHHHHHHHHhcCCCCceeccccc-------------e------
Q 002155 684 TNIIGDGGFGTVYKAALPDGKTVAVKKLSQAKTQGHREFTAEMETLGKVKHQNLVPLLGY-------------C------ 744 (959)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~-------------~------ 744 (959)
.+..-.|.. .||.+.. ++..|+||... .-..+.+..++...-.+.-|...-+... +
T Consensus 74 I~~s~~Gst-gvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~ 148 (342)
T 1cja_A 74 IERSEKGTE-GLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRV 148 (342)
T ss_dssp EEECCSTTS-CEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCH
T ss_pred EEeccCCCC-CeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHH
Confidence 344455554 4555544 57899999542 2233344555555555555552211100 0
Q ss_pred ---ecCCceEEEEEeccCCCHHHHHhhhcCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC-eEe-CCCCCCCEEECCCC
Q 002155 745 ---SFDEEKLLVYEYMVNGSLDLWLRNRTGSLEVLGWDKRYKIACGAARGLAFLHHGFTPH-IIH-RDIKASNILLNEEF 819 (959)
Q Consensus 745 ---~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH-~dlk~~Nill~~~~ 819 (959)
......+++|||++|..|...-.... ...+.......+. -+-++.....+.++- .++ .-=.++|||+++++
T Consensus 149 l~~l~~~~~~l~meyv~G~~L~e~~~~~~--~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n 224 (342)
T 1cja_A 149 ITTLANQANILLMELVRGITLNKLTTTSA--PEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERG 224 (342)
T ss_dssp HHHHTTCSEEEEEECCCEEESTTCCSSSH--HHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBT
T ss_pred HHHhhcccceehhhhcCCCccccchhhhh--hhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhheEEeCCC
Confidence 01234669999999766643211100 0112222222111 123455555443332 211 22578899997654
Q ss_pred -cEEEcccccccc
Q 002155 820 -EAKVADFGLARL 831 (959)
Q Consensus 820 -~~kl~Dfg~~~~ 831 (959)
.+.++|-+.+..
T Consensus 225 ~~~~~IDhn~af~ 237 (342)
T 1cja_A 225 ATVVPIDSKIIPL 237 (342)
T ss_dssp TCEEECSCCCCCC
T ss_pred CeEEEEcCCcccc
Confidence 488999998854
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=39.44 E-value=48 Score=27.65 Aligned_cols=45 Identities=13% Similarity=0.172 Sum_probs=24.9
Q ss_pred ccccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCCEEEccc
Q 002155 197 LKGHLPKEIGNLSALSVLDLNSNLFDGIIPYELGDCISLTTLDLGN 242 (959)
Q Consensus 197 i~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 242 (959)
++.+...+|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344455666666666666544 2335555666666666666654
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=39.34 E-value=39 Score=22.56 Aligned_cols=12 Identities=8% Similarity=0.274 Sum_probs=6.3
Q ss_pred hhhhhhhhHHHH
Q 002155 593 AFGLAGLVVGCV 604 (959)
Q Consensus 593 ~~~~~~~~~~~v 604 (959)
...++|++++.+
T Consensus 10 ~GaIAGiVvG~v 21 (38)
T 2k1k_A 10 GGEIVAVIFGLL 21 (38)
T ss_dssp HHHHHHHHHHHH
T ss_pred CCceeeeehHHH
Confidence 444566655544
No 457
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=35.22 E-value=48 Score=22.91 Aligned_cols=13 Identities=38% Similarity=0.552 Sum_probs=5.4
Q ss_pred hhhhhh-hhHHHHH
Q 002155 593 AFGLAG-LVVGCVF 605 (959)
Q Consensus 593 ~~~~~~-~~~~~v~ 605 (959)
+.+++| +++.+++
T Consensus 14 A~gVVgGv~~~~ii 27 (44)
T 2ks1_B 14 ATGMVGALLLLLVV 27 (44)
T ss_dssp THHHHHHHHHHHHH
T ss_pred EeehhHHHHHHHHH
Confidence 334444 4443333
No 458
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=34.61 E-value=55 Score=22.62 Aligned_cols=12 Identities=33% Similarity=0.562 Sum_probs=5.2
Q ss_pred hhhhhh-hhHHHH
Q 002155 593 AFGLAG-LVVGCV 604 (959)
Q Consensus 593 ~~~~~~-~~~~~v 604 (959)
+.+++| +++.++
T Consensus 13 A~gVVgGv~~v~i 25 (44)
T 2l2t_A 13 AAGVIGGLFILVI 25 (44)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehHHHHHHHH
Confidence 444444 444333
No 459
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=23.65 E-value=3e+02 Score=33.72 Aligned_cols=25 Identities=24% Similarity=0.274 Sum_probs=22.9
Q ss_pred CCCCCCCEEECCCCcEEEccccccc
Q 002155 806 RDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 806 ~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
||=.++|||++.+|++.-+|||.+-
T Consensus 940 GDRH~~NILid~tG~v~HIDFG~~f 964 (1092)
T 2y3a_A 940 GDRHSDNIMVKKTGQLFHIDFGHIL 964 (1092)
T ss_dssp CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred CCCCCccEEEecCCCEEEEeehhhh
Confidence 6788999999999999999999874
No 460
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=23.28 E-value=2.2e+02 Score=34.85 Aligned_cols=60 Identities=22% Similarity=0.271 Sum_probs=37.2
Q ss_pred CHHHHHhhhcCCccccCHHHH-HHHHHHHH--HHHHHHHhcCCCCeEeCCCCCCCEEECCCCcEEEccccccc
Q 002155 761 SLDLWLRNRTGSLEVLGWDKR-YKIACGAA--RGLAFLHHGFTPHIIHRDIKASNILLNEEFEAKVADFGLAR 830 (959)
Q Consensus 761 ~L~~~l~~~~~~~~~l~~~~~-~~i~~~i~--~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 830 (959)
.+.+|+.... ....|..+ ..++..+| +.+.|+= | -||=.++|||++.+|++.-+|||.+-
T Consensus 899 ~L~~~f~~~~---~~~~~~~ar~nF~~S~A~ysvv~YiL-----g--igDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 899 TLHQWLKDKN---KGEIYDAAIDLFTRSCAGYCVATFIL-----G--IGDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp HHHHHHHTTS---CTTSHHHHHHHHHHHHHHHHHHHHHH-----T--CCCCCTTTEEEETTSCEEECCCCCCS
T ss_pred HHHHHHHhcC---ChHHHHHHHHHHHHHhhhhhheEEEE-----e--ecCCCCcceEEeCCCCEEEEeehhhh
Confidence 4555555433 12334443 34444433 2345544 2 25777999999999999999999984
No 461
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=20.17 E-value=1.4e+02 Score=20.68 Aligned_cols=8 Identities=38% Similarity=0.625 Sum_probs=3.7
Q ss_pred hhhhhhHH
Q 002155 595 GLAGLVVG 602 (959)
Q Consensus 595 ~~~~~~~~ 602 (959)
.+++.+++
T Consensus 13 ~Ia~~vVG 20 (44)
T 2jwa_A 13 SIISAVVG 20 (44)
T ss_dssp HHHHHHHH
T ss_pred chHHHHHH
Confidence 34444444
Done!